Index of /~karplus/casp9/starter-directory/scripts

 Name                    Last modified      Size  Description
 ChainIds.pm             2006-05-10 10:54   17K  
 MQA_everything.costfcn  2008-05-04 21:06  515   
 MQA_highE.costfcn       2008-04-12 10:39  515   
 MQA_initRC_highE.cos..> 2008-04-12 13:10  635   
 MQA_initRC_lowE.costfcn 2008-04-16 17:27  679   
 MQA_lowE.costfcn        2008-04-12 10:39  481   
 ParseCompare.pm         2005-05-11 22:41  2.3K  
 RDBCombine              2005-11-21 13:20  3.6K  
 RDBParse.pm             2007-12-31 09:17  2.5K  
 READ_RDB.pm             2002-10-02 14:54  905   
 add_cost_cols.pl        2009-04-29 00:24  5.6K  
 add_jpeg_views_html     2008-04-22 15:51  1.8K  
 add_scwrl_ext.pl        2009-04-23 01:30  320   
 align+under+sim-hev...> 2008-05-06 17:27  307   
 align+under+sim-lev...> 2008-05-06 17:27  373   
 align+under-hev.costfcn 2008-05-06 17:27  367   
 align+under-lev.costfcn 2008-05-06 17:27  323   
 align.costfcn           2008-05-06 17:27   96   
 annotate_target_scores  2007-12-30 18:43  4.2K  
 annotate_template_sc..> 2007-12-31 13:35  4.2K  
 best-qa.pl              2009-04-12 15:11  4.8K  
 best_scores             2008-04-05 20:27   13K  
 casp-compare.pl         2008-11-27 17:50  3.9K  
 casp_summary_report_..> 2008-04-13 10:09  6.0K  
 cite                    2008-04-20 09:38  2.6K  
 constraints-from-rdb    2008-04-09 15:35  5.7K  
 costfcn-init-eval.under 2008-11-20 09:40  6.3K  
 costfcn-init.under      2008-05-23 17:02  6.3K  
 eval_alignments.under   2008-11-20 09:35  1.6K  
 evaluate-exemplar.under 2010-03-08 16:22  1.7K  
 evaluate-mqa.under      2010-05-04 22:52  1.8K  
 evaluate.under          2009-02-09 13:36  3.0K  
 everything.costfcn      2008-05-05 04:34  1.9K  
 extract-guide           2006-07-15 16:41  1.2K  
 find-TR.under           2008-08-02 17:05  1.1K  
 find-best-GDTs          2010-05-04 22:52  301   
 first_residue           2008-06-09 15:34  306   
 get-meta.pl             2008-11-16 11:39  3.4K  
 handle_summary_html.pl  2008-04-13 10:13   12K  
 how-different.under     2008-08-02 20:26  1.2K  
 init.rasmol             2006-02-27 11:35   94   
 key-to-rasmol           2004-08-24 15:04  1.5K  
 make-alignments         2008-04-13 09:55  2.4K  
 make-dimer.under        2008-06-17 04:15  1.2K  
 make-eps.rasmol         2008-01-02 16:36  168   
 make-repack-res-file    2004-07-19 20:56  4.7K  
 make-trimer.under       2008-06-09 15:41  1.3K  
 make_all_templates_u..> 2008-04-06 10:47  4.4K  
 make_undertaker_alig..> 2008-02-03 12:15  1.0K  
 medianSimilarity.pl     2008-07-01 15:49  6.8K  
 merge_ts1_ts2           2009-03-14 16:34  2.2K  
 metaserve-MQAC1.under   2008-06-24 16:26  5.1K  
 metaserve-MQAU1.under   2008-06-24 16:27  5.1K  
 new-target              2010-05-04 22:52  2.8K  
 new_target_and_save     2010-05-04 23:24  322   
 new_target_and_save~    2010-05-04 23:21  234   
 nmr_ax.pl               2009-07-19 18:15   13K  
 oneway_hits_rdb2html    2009-01-29 10:00  4.4K  
 optimize.under          2008-04-06 14:32  1.0K  
 pdb2casp                2006-06-14 23:39   12K  
 pick_alignments         2008-05-05 16:56   11K  
 prettyscore             2008-06-13 08:56   12K  
 qa2rdb.pl               2010-05-04 22:52  2.3K  
 qa_groups.pl            2010-05-04 22:58  1.1K  
 rasmol_color_from_bu..> 2008-06-25 17:24  6.9K  
 rdb2casp                2005-05-11 22:41  901   
 rdb2qa1.pl              2008-05-06 17:11  3.0K  
 read-decoys.under       2009-02-06 08:32  942   
 reweight_rdb.pl         2009-02-27 15:20  3.0K  
 run-gromacs             2011-05-06 20:16  2.8K  
 run-gromacs~            2008-04-19 11:27  2.5K  
 save_server_dir         2010-05-04 22:52  1.7K  
 score-all.under         2008-04-12 10:35  925   
 seq-from-rdb            2004-05-17 10:36  1.3K  
 shorten_mod_names       2008-04-14 11:28  680   
 show-align.under        2006-04-13 09:12  1.2K  
 sort-by-rosetta         2011-05-06 13:33  650   
 sort-by-rosetta~        2008-12-26 10:14  603   
 split-into-domains      2008-07-08 20:56  7.9K  
 superimpose-best.under  2008-04-20 08:35  1.9K  
 target_difficulty.pl    2009-02-26 23:30  2.3K  
 try1-bad.costfcn        2008-04-12 13:33  919   
 try1.costfcn            2008-05-06 17:32  751   
 try1.under              2008-06-15 10:23  5.6K  
 try2.under              2008-06-26 12:59  5.7K  
 unconstrained.costfcn   2008-04-12 10:35  354   
 under_from_qa1          2008-05-12 09:36  1.3K  
 unique_rdb_headers.pl   2009-02-08 22:48  2.8K  
 unpack-multimer         2008-08-19 12:58  5.5K  
 weights2under.pl        2008-05-06 17:24  405