#!/bin/csh

# looks through the decoys directory for repacked pdb files (possibly gzipped)
# and sorts their "total" lines into decoys/grep-best-rosetta


rm -f decoys/grep-best-rosetta.tmp
foreach x (decoys/*repack-nonPC.pdb* decoys/*repack.pdb* decoys/*redesign*.pdb* decoys/*relax.pdb*)
    echo -n $x : >> decoys/grep-best-rosetta.tmp
    if ( $x:e == gz ) then
       gunzip -c $x | grep '\(totals\|\pose\)' >> decoys/grep-best-rosetta.tmp
    else
       grep '\(totals\|\pose\)' < $x  >> decoys/grep-best-rosetta.tmp
    endif
 end
 
 sort -g -k 17 decoys/grep-best-rosetta.tmp > decoys/grep-best-rosetta
 
 rm -f decoys/grep-best-rosetta.tmp