Index of /~vollmers
Name Last modified Size Description
![[ ]](/icons/unknown.gif)
Allele1.bam 2019-08-21 10:48 37K
Allele1.bam.bai 2019-08-21 10:48 754K
Allele2.bam.bai 2019-08-21 10:48 631K
Allele2.bam 2019-08-21 10:57 31K
![[DIR]](/icons/folder.gif)
bootcamp_data/ 2019-08-23 11:44 -
PBMC_data/ 2019-12-14 14:46 -
10XR2C2/ 2020-01-08 17:51 -
enriched.sorted.bam 2020-02-16 13:21 2.7M
enriched.sorted.bam.bai 2020-02-16 13:21 1.3M
MPs/ 2020-02-24 12:55 -
PB.bam 2020-04-19 14:00 35M
PB.bam.bai 2020-04-19 14:00 1.5M
![[TXT]](/icons/text.gif)
DESeq2_script.R 2020-04-25 23:10 1.8K
Jolene/ 2020-04-25 23:17 -
![[ ]](/icons/compressed.gif)
COPD_R2C2_Data.tar.gz 2020-07-02 11:05 335M
Apple_MA_Illumina_tr..> 2020-07-02 17:00 -
Apple_MA_R2C2_tracks/ 2020-07-02 17:00 -
MAIA/ 2020-07-02 17:16 -
hubtest/ 2020-07-03 11:48 -
canualn_sorted.bam 2020-07-20 18:09 743K
canualn_sorted.bam.bai 2020-07-20 18:09 56K
hifiasmIGH.bam 2020-07-21 13:53 1.9M
hifiasmIGH.bam.bai 2020-07-21 13:53 58K
mmcdnaIGH.bam 2020-07-22 14:12 5.2K
mmcdnaIGH.bam.bai 2020-07-22 14:12 56K
COPD_R2C2_reads.sort..> 2020-07-23 14:08 4.0M
COPD_R2C2_reads.sort..> 2020-07-23 14:08 1.4M
COPD_subsampled.bam 2020-07-23 14:10 4.0M
COPD_subsampled.bam.bai 2020-07-23 14:10 1.4M
COPD_subsampled1.bam 2020-07-23 14:29 3.9M
COPD_subsampled1.bam..> 2020-07-23 14:29 1.4M
gencode.sorted.bam 2020-12-28 15:22 13M
gencode.sorted.bam.bai 2020-12-28 15:22 1.5M
mandalorion.gtf 2020-12-28 17:24 50M
racon.combined.sorte..> 2021-07-28 17:49 1.0M
racon.combined.sorte..> 2021-07-28 17:49 1.2M
soy.sorted.bam 2021-08-13 11:00 218M
soy.sorted.bam.bai 2021-08-13 11:01 947K
merge_output.vcf.gz 2021-09-16 10:27 81K
merge_output.vcf 2021-09-16 13:02 32K
Sample1_clair3.vcf 2021-09-17 16:18 32K
Sample2.clair3.vcf 2021-09-17 16:19 38K
Sample1.trimmed.q.so..> 2021-09-19 12:47 343M
Sample1.trimmed.q.no..> 2021-09-19 18:20 285M
Sample1.trimmed.q.no..> 2021-09-19 18:20 3.2M
Sample1.trimmed.noSo..> 2021-09-20 16:02 285M
Sample1.trimmed.noSo..> 2021-09-20 16:02 3.2M
Sample2.trimmed.noSo..> 2021-09-20 16:02 138M
Sample2.trimmed.noSo..> 2021-09-20 16:02 4.0M
![[ ]](/icons/layout.gif)
IBWN_Vollmers.pdf 2021-10-28 20:33 1.8M
Illumina_rep1_reads...> 2021-11-06 10:18 561M
Illumina_rep2_reads...> 2021-11-06 10:20 583M
Sizeselected.sorted...> 2021-11-30 13:10 2.4M
miniasmsorted.bam 2022-01-22 18:10 8.9M
miniasmsorted.bam.bai 2022-01-22 18:10 1.2M
dbg.raw.sorted.bam 2022-01-26 16:44 3.4M
dbg.raw.sorted.bam.bai 2022-01-26 16:44 1.2M
flye.sorted.bam 2022-01-26 19:11 18M
flye.sorted.bam.bai 2022-01-26 19:11 1.3M
1.sorted.bam 2022-01-27 16:32 131K
1.sorted.bam.bai 2022-01-27 16:32 274K
21.sorted.bam 2022-01-27 18:20 708K
21.sorted.bam.bai 2022-01-27 18:20 279K
filtered_reads.minia..> 2022-01-30 19:11 456K
filtered_reads.minia..> 2022-01-30 19:11 720K
11169.sorted.bam 2022-01-30 20:57 15K
11169.sorted.bam.bai 2022-01-30 20:57 30K
11181.sorted.bam 2022-01-31 20:44 38K
11181.sorted.bam.bai 2022-01-31 20:44 123K
filtered_reads.sorte..> 2022-01-31 21:14 490M
filtered_reads.sorte..> 2022-01-31 21:14 1.5M
Sample.sorted.bam 2022-03-04 20:07 3.9M
Sample1.sorted.bam 2022-03-04 22:37 13M
Sample1.sorted.bam.bai 2022-03-04 22:37 2.8M
Sample2.sorted.bam 2022-03-04 22:37 13M
Sample2.sorted.bam.bai 2022-03-04 22:37 3.0M
Sample3.sorted.bam 2022-03-04 22:37 6.5M
Sample3.sorted.bam.bai 2022-03-04 22:37 2.2M
StarTestAligned.out...> 2022-03-12 20:41 2.4M
SS.bed 2022-04-06 20:07 16M
cow1genometoUCSCRef_..> 2022-06-21 11:12 1.4M
valid.sorted.bam 2022-09-27 21:42 22M
valid.sorted.bam.bai 2022-09-27 21:42 1.6M
invalid.sorted.bam 2022-09-27 21:42 5.2M
invalid.sorted.bam.bai 2022-09-27 21:42 1.5M
bigPsl.bb 2023-05-20 16:11 21M
bigPsl.indels.bb 2023-05-20 17:45 22M
TAMI/ 2023-05-21 06:30 -
b6129s1toref.bam 2024-05-06 13:57 201M
b6129s1toref.bam.bai 2024-05-06 14:00 1.5M
b6129s1toref_sub.bam 2024-05-07 08:52 27M
b6129s1toref_sub.bam..> 2024-05-07 08:52 1.4M
b61toref_sub.bam 2024-05-07 08:55 207M
b61toref_sub.bam.bai 2024-05-07 08:55 1.5M
Human1.trimmed.bc1.m..> 2024-05-13 12:07 2.7M
Circadian_BrowserIma..> 2024-10-06 22:19 1.0G
Circadian_BrowserIma..> 2024-10-06 22:24 656M
G02.trimmed.sorted.bam 2024-10-18 14:36 645K
G02.trimmed.sorted.b..> 2024-10-18 14:36 1.5M
A01.trimmed.sorted.bam 2024-10-18 14:36 420K
A01.trimmed.sorted.b..> 2024-10-18 14:36 1.4M
D6.trimmed.sorted.bam 2024-10-25 21:21 288K
D6.trimmed.sorted.ba..> 2024-10-25 21:21 1.3M
test.sorted.bam 2024-12-10 17:44 5.0M
test.sorted.bam.bai 2024-12-10 17:44 1.7M
Twist.vcf 2024-12-10 19:27 49K
G02.trimmed.bc1.merg..> 2024-12-21 15:42 51M
G02.trimmed.bc1.merg..> 2024-12-21 15:42 3.4M
A01.trimmed.bc1.merg..> 2024-12-21 15:43 38M
A01.trimmed.bc1.merg..> 2024-12-21 15:43 2.8M
G01.trimmed.bc1.merg..> 2025-01-04 11:43 61M
G01.trimmed.bc1.merg..> 2025-01-04 11:43 3.5M
Volden.sc.rep1.fasta.gz 2025-03-10 12:42 4.2G
Volden.sc.rep2.fasta.gz 2025-03-10 12:44 4.2G
DNAse1seq.sorted.bam 2025-10-22 13:10 384M
DNAse1seq.sorted.bam..> 2025-10-22 13:10 4.7M
16Srun1_pass.fastq.gz 2026-01-13 11:07 3.3G
16Srun1_recovered.fa..> 2026-01-13 11:08 7.6G
Isoforms.filtered.so..> 2026-02-15 19:34 120M
Brain.exonMerge.bam 2026-02-15 19:34 120M
Brain.exonMerge.bam.bai 2026-02-15 19:34 1.8M
Brain.bam.bai 2026-02-15 19:35 1.7M
Brain.bam 2026-02-15 19:35 47M
Brain_IG28.chr.gtf 2026-03-17 16:26 100M
Brain_M4.6.chr.gtf 2026-03-17 16:27 92M
Brain_IG28lrf.chr.gtf 2026-03-22 15:31 92M
Isoforms.filtered.cl..> 2026-03-22 22:51 196M
Isoforms.filtered.ch..> 2026-03-22 22:53 92M
Isoforms.filtered.cl..> 2026-03-23 11:12 109M
Brain.mono.gtf 2026-03-23 11:13 109M
Kinnex-1KG.gtf 2026-04-04 15:02 293M
Apache/2.4.6 (CentOS) Server at users.soe.ucsc.edu Port 443