Alignment of C. briggsae to C. elegans using the Wobble Aware Bulk Aligner (WABA), an alignment tool developed by Jim Kent for doing large-scale alignments between genomic DNA of different species.
The waba alignment algorithm is described in Kent, WJ and Zahler, AM (2000). "Conservation, Regulation, Synteny, and Introns in a Large-scale C. briggsae-C. elegans Genomic Alignment", Genome Res 10(8):1115-1125.
Waba was developed by Jim Kent and Alan M. Zahler.
C. briggsae version cb25.agp8 (11 July 2002) and C. elegans version WS100 (02 May 2003) were used in creating this annotation. Thanks to WormBase and Lincoln Stein.