The Mammalian Gene Collection $organism A-list missing full CDS clones from 25 Apr 2003. A-list is comprised of all the known, well-characterized human genes that don't have MGC representitives.
Genes on the MGC A-list are selected by name from RefSeq mRNAs that align to the $organism genome. There were 47 of the 2038 genes on the A-list that couldn't be located using this methodology. These are either RefSeq mRNAs that didn't have alignments or where the gene name could not be associated with a RefSeq mRNA.
The following RefSeq mRNAs either didn't align to the genome or pass the alignment quality filters.
ADCYAP1R1 | NM_001118 |
CCR4 | NM_005508 |
CRN | NM_006587 |
CYP2D6 | NM_000106 |
DCSTAMP | NM_030788 |
EIF2C1 | NM_012199 |
EPHB3 | NM_004443 |
ERN2 | NM_033266 |
FSCN2 | NM_012418 |
GAGE3 | NM_001473 |
GAGE6 | NM_001476 |
GAGE7B | NM_001477 |
GALNT9 | NM_021808 |
GALR2 | NM_003857 |
HIST2H2AB | NM_175065 |
ILT7 | NM_012276 |
KBF2 | NM_015874 |
KIR2DS3 | NM_012313 |
KNTC1 | NM_014708 |
KRTAP4-14 | NM_033059 |
KRTAP9-8 | NM_031963 |
MAGEB3 | NM_002365 |
OR2H3 | NM_007160 |
PDE6G | NM_002602 |
PPFIA2 | NM_003625 |
SCN10A | NM_006514 |
SCRT1 | NM_031309 |
SHOX | NM_000451 |
SHOX | NM_006883 |
ZNF73 | NM_012480 |
An associated RefSeq couldn't be located for the following genes when searching by gene name.
DMRT3 |
FER1L4 |
FLJ13659 |
FLJ14356 |
FLJ20573 |
FLJ38637 |
HUMPPA |
KCNH3 |
KIAA1361 |
LBN |
LOC201382 |
LOC90317 |
MUC5B |
SHANK3 |
SLC24A3 |
TCF20 |
TUBA8 |