Candidate Oligos for every exon on sanger 22 track

Oligos were chosen for every exon described by the Sanger annotation of chromosome 22 larger than 70 base pairs. For this purpose exons are defined to include 3' and 5' UTRs. Oligos were chosen using the following algorithm:

About the scores:

Please note that all coordinates are relative to the '+' strand while all oligo sequences are 5'->3'. This means that all sequences displayed are part of the sense strand. So if the oligo is represented in the database as being on the '-' strand and starts at 1 and ends at 5 of 'atgcatgc' the '+' sequence of the probe would be 'tgcat' but that is 3'->5' on the '-' strand so the sequence in the sequence would be the reverse complement 'atgct'.