The Human Genome Project and UCSC

3/9/01


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Table of Contents

The Human Genome Project and UCSC

Double Helix

The Assembly Problem

Deconstructing Mary

Mixed Up Pieces of Mary

Assembling Overlapping Pieces

So Far So Good

Sometimes Placement Uncertain

Some Pieces Don’t Fit

Ending Up With Two Contigs?

Repeats Have Confused Assembly

Coping with Repeats

Even a perfect assembly has no punctuation

PPT Slide

Promoter Tells Where to Begin

Comparing DNA from Related Species

Other Bioinformatic at UCSC

Author: Jim Kent

Email: kent@biology.ucsc.edu

Home Page: www.cse.ucsc.edu/~kent

Other information:
Presentation for Scholars Day, 10 March 2001.