# command:# Prefix for input files set to 
# command:# Prefix for output files set to 
# command:# Read 1 alphabets and 0 BackgroundProbs from /projects/compbio/lib/alphabet/strand_sep.alphabet
# command:# Neural network set to dunbrack-30pc-1763-t06-thin90-IDGaaH13-3-13-7-13-9-13-11-tr31-strand_sep-from-empty.net
# command:# Neural network set to dunbrack-40pc-3157-t2k-IDGaaH13-3-13-7-13-9-13-11-strand_sep-seeded.net
# command:# Learning params read from /projects/compbio/experiments/protein-predict/predict-2nd/testing/params/7-jul-05.params
# command:# Initializing Gain for strand_sep
WARNING: BackgroundProbs for strand_sep not read in before initializing network.
# Initializing Gain for third_layer
# Initializing Gain for second_layer
# Initializing Gain for FirstLayer
# Network initialization done
# command:CPU_time= 0.011999 sec, elapsed time= 0.047777 sec)
# command:# command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/predict-2nd/testing/training-data/
# command:# reading script from file dunbrack-40pc-3157.t2k-strand_sep
# Prefix for input files set to 
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2jamA/nostruct-align/2jamA.t2k.a2m.gz
# 2jamA.t2k.a2m with 20348 sequences, total weight= 20348 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29857 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2jamA/info/2jamA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2jamA/nostruct-align/2jamA.t2k.a2m.gz, have 279 columns in 1 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2f62A/nostruct-align/2f62A.t2k.a2m.gz
# 2f62A.t2k.a2m with 81 sequences, total weight= 65.505 avg weight= 0.808704 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2f62A/info/2f62A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2f62A/nostruct-align/2f62A.t2k.a2m.gz, have 437 columns in 2 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s0aA/nostruct-align/1s0aA.t2k.a2m.gz
# 1s0aA.t2k.a2m with 3139 sequences, total weight= 577.951 avg weight= 0.18412 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.33035 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s0aA/info/1s0aA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1s0aA/nostruct-align/1s0aA.t2k.a2m.gz, have 865 columns in 3 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vloA/nostruct-align/1vloA.t2k.a2m.gz
# 1vloA.t2k.a2m with 420 sequences, total weight= 181.87 avg weight= 0.433023 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30367 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vloA/info/1vloA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vloA/nostruct-align/1vloA.t2k.a2m.gz, have 1229 columns in 4 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jnrA/nostruct-align/1jnrA.t2k.a2m.gz
# 1jnrA.t2k.a2m with 440 sequences, total weight= 440 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11709 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jnrA/info/1jnrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jnrA/nostruct-align/1jnrA.t2k.a2m.gz, have 1871 columns in 5 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jkeA/nostruct-align/1jkeA.t2k.a2m.gz
# 1jkeA.t2k.a2m with 122 sequences, total weight= 8.34531 avg weight= 0.0684042 30 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jkeA/info/1jkeA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jkeA/nostruct-align/1jkeA.t2k.a2m.gz, have 2016 columns in 6 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nxcA/nostruct-align/2nxcA.t2k.a2m.gz
# 2nxcA.t2k.a2m with 6463 sequences, total weight= 6463 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.89524 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nxcA/info/2nxcA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2n/2nxcA/nostruct-align/2nxcA.t2k.a2m.gz, have 2265 columns in 7 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gdm/nostruct-align/2gdm.t2k.a2m.gz
# 2gdm.t2k.a2m with 614 sequences, total weight= 249.363 avg weight= 0.406129 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30723 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gdm/info/2gdm.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gdm/nostruct-align/2gdm.t2k.a2m.gz, have 2418 columns in 8 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w2wB/nostruct-align/1w2wB.t2k.a2m.gz
# 1w2wB.t2k.a2m with 235 sequences, total weight= 51.9201 avg weight= 0.220936 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w2wB/info/1w2wB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w2wB/nostruct-align/1w2wB.t2k.a2m.gz, have 2609 columns in 9 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2f6rA/nostruct-align/2f6rA.t2k.a2m.gz
# 2f6rA.t2k.a2m with 523 sequences, total weight= 113.84 avg weight= 0.217667 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30053 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2f6rA/info/2f6rA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2f6rA/nostruct-align/2f6rA.t2k.a2m.gz, have 2839 columns in 10 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dlwA/nostruct-align/1dlwA.t2k.a2m.gz
# 1dlwA.t2k.a2m with 61 sequences, total weight= 22.078 avg weight= 0.361935 41 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dlwA/info/1dlwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dlwA/nostruct-align/1dlwA.t2k.a2m.gz, have 2955 columns in 11 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ixh/nostruct-align/1ixh.t2k.a2m.gz
# 1ixh.t2k.a2m with 235 sequences, total weight= 71.3853 avg weight= 0.303767 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30031 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ixh/info/1ixh.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1ixh/nostruct-align/1ixh.t2k.a2m.gz, have 3276 columns in 12 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1z0wA/nostruct-align/1z0wA.t2k.a2m.gz
# 1z0wA.t2k.a2m with 973 sequences, total weight= 564.072 avg weight= 0.579725 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30677 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1z0wA/info/1z0wA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1z0wA/nostruct-align/1z0wA.t2k.a2m.gz, have 3479 columns in 13 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kwfA/nostruct-align/1kwfA.t2k.a2m.gz
# 1kwfA.t2k.a2m with 71 sequences, total weight= 68.5223 avg weight= 0.965102 35 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kwfA/info/1kwfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kwfA/nostruct-align/1kwfA.t2k.a2m.gz, have 3842 columns in 14 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gc0A/nostruct-align/1gc0A.t2k.a2m.gz
# 1gc0A.t2k.a2m with 740 sequences, total weight= 740 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00084 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gc0A/info/1gc0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gc0A/nostruct-align/1gc0A.t2k.a2m.gz, have 4197 columns in 15 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cvdA/nostruct-align/2cvdA.t2k.a2m.gz
# 2cvdA.t2k.a2m with 1601 sequences, total weight= 1601 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14711 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cvdA/info/2cvdA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cvdA/nostruct-align/2cvdA.t2k.a2m.gz, have 4395 columns in 16 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cm2A/nostruct-align/2cm2A.t2k.a2m.gz
# 2cm2A.t2k.a2m with 2551 sequences, total weight= 1364.36 avg weight= 0.534834 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31531 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cm2A/info/2cm2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cm2A/nostruct-align/2cm2A.t2k.a2m.gz, have 4678 columns in 17 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2dplA/nostruct-align/2dplA.t2k.a2m.gz
# 2dplA.t2k.a2m with 1868 sequences, total weight= 1868 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2357 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2dplA/info/2dplA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2dplA/nostruct-align/2dplA.t2k.a2m.gz, have 4965 columns in 18 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yn3A/nostruct-align/1yn3A.t2k.a2m.gz
# 1yn3A.t2k.a2m with 44 sequences, total weight= 6.25623 avg weight= 0.142187 23 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yn3A/info/1yn3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yn3A/nostruct-align/1yn3A.t2k.a2m.gz, have 5063 columns in 19 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x82A/nostruct-align/1x82A.t2k.a2m.gz
# 1x82A.t2k.a2m with 189 sequences, total weight= 189 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2387 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x82A/info/1x82A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1x82A/nostruct-align/1x82A.t2k.a2m.gz, have 5253 columns in 20 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uj2A/nostruct-align/1uj2A.t2k.a2m.gz
# 1uj2A.t2k.a2m with 407 sequences, total weight= 407 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21452 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uj2A/info/1uj2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uj2A/nostruct-align/1uj2A.t2k.a2m.gz, have 5466 columns in 21 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ro7A/nostruct-align/1ro7A.t2k.a2m.gz
# 1ro7A.t2k.a2m with 13 sequences, total weight= 3.36111 avg weight= 0.258547 14 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ro7A/info/1ro7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1ro7A/nostruct-align/1ro7A.t2k.a2m.gz, have 5724 columns in 22 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l7aA/nostruct-align/1l7aA.t2k.a2m.gz
# 1l7aA.t2k.a2m with 311 sequences, total weight= 311 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.869852 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l7aA/info/1l7aA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1l7aA/nostruct-align/1l7aA.t2k.a2m.gz, have 6042 columns in 23 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zbfA/nostruct-align/1zbfA.t2k.a2m.gz
# 1zbfA.t2k.a2m with 132 sequences, total weight= 30.8196 avg weight= 0.233482 42 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zbfA/info/1zbfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zbfA/nostruct-align/1zbfA.t2k.a2m.gz, have 6174 columns in 24 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iybA/nostruct-align/1iybA.t2k.a2m.gz
# 1iybA.t2k.a2m with 518 sequences, total weight= 146.506 avg weight= 0.282829 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30455 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iybA/info/1iybA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1iybA/nostruct-align/1iybA.t2k.a2m.gz, have 6382 columns in 25 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o6vA/nostruct-align/1o6vA.t2k.a2m.gz
# 1o6vA.t2k.a2m with 3230 sequences, total weight= 3230 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.881793 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o6vA/info/1o6vA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1o6vA/nostruct-align/1o6vA.t2k.a2m.gz, have 6844 columns in 26 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yu0A/nostruct-align/1yu0A.t2k.a2m.gz
# 1yu0A.t2k.a2m with 10 sequences, total weight= 5.46339 avg weight= 0.546339 11 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yu0A/info/1yu0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yu0A/nostruct-align/1yu0A.t2k.a2m.gz, have 7220 columns in 27 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ugxA/nostruct-align/1ugxA.t2k.a2m.gz
# 1ugxA.t2k.a2m with 290 sequences, total weight= 48.9977 avg weight= 0.168957 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30043 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ugxA/info/1ugxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1ugxA/nostruct-align/1ugxA.t2k.a2m.gz, have 7353 columns in 28 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fx2A/nostruct-align/1fx2A.t2k.a2m.gz
# 1fx2A.t2k.a2m with 388 sequences, total weight= 157.347 avg weight= 0.405533 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30196 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fx2A/info/1fx2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fx2A/nostruct-align/1fx2A.t2k.a2m.gz, have 7588 columns in 29 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jhjA/nostruct-align/1jhjA.t2k.a2m.gz
# 1jhjA.t2k.a2m with 52 sequences, total weight= 18.4005 avg weight= 0.353857 32 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jhjA/info/1jhjA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jhjA/nostruct-align/1jhjA.t2k.a2m.gz, have 7749 columns in 30 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nw0A/nostruct-align/2nw0A.t2k.a2m.gz
# 2nw0A.t2k.a2m with 192 sequences, total weight= 80.8826 avg weight= 0.421264 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30053 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nw0A/info/2nw0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2n/2nw0A/nostruct-align/2nw0A.t2k.a2m.gz, have 7938 columns in 31 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2ob5A/nostruct-align/2ob5A.t2k.a2m.gz
# 2ob5A.t2k.a2m with 196 sequences, total weight= 24.1517 avg weight= 0.123223 44 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2ob5A/info/2ob5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2ob5A/nostruct-align/2ob5A.t2k.a2m.gz, have 8089 columns in 32 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wvqA/nostruct-align/1wvqA.t2k.a2m.gz
# 1wvqA.t2k.a2m with 51 sequences, total weight= 4.47638 avg weight= 0.0877721 22 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wvqA/info/1wvqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wvqA/nostruct-align/1wvqA.t2k.a2m.gz, have 8252 columns in 33 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ugpB/nostruct-align/1ugpB.t2k.a2m.gz
# 1ugpB.t2k.a2m with 38 sequences, total weight= 12.5215 avg weight= 0.329513 24 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ugpB/info/1ugpB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1ugpB/nostruct-align/1ugpB.t2k.a2m.gz, have 8478 columns in 34 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jniA/nostruct-align/1jniA.t2k.a2m.gz
# 1jniA.t2k.a2m with 42 sequences, total weight= 4.35499 avg weight= 0.10369 23 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jniA/info/1jniA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jniA/nostruct-align/1jniA.t2k.a2m.gz, have 8540 columns in 35 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gmyA/nostruct-align/2gmyA.t2k.a2m.gz
# 2gmyA.t2k.a2m with 594 sequences, total weight= 594 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29337 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gmyA/info/2gmyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gmyA/nostruct-align/2gmyA.t2k.a2m.gz, have 8687 columns in 36 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mjnA/nostruct-align/1mjnA.t2k.a2m.gz
# 1mjnA.t2k.a2m with 865 sequences, total weight= 865 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29574 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mjnA/info/1mjnA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mjnA/nostruct-align/1mjnA.t2k.a2m.gz, have 8866 columns in 37 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vzqH/nostruct-align/1vzqH.t2k.a2m.gz
# 1vzqH.t2k.a2m with 4522 sequences, total weight= 4522 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23382 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vzqH/info/1vzqH.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vzqH/nostruct-align/1vzqH.t2k.a2m.gz, have 9116 columns in 38 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fphX/nostruct-align/2fphX.t2k.a2m.gz
# 2fphX.t2k.a2m with 117 sequences, total weight= 41.1247 avg weight= 0.351493 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fphX/info/2fphX.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fphX/nostruct-align/2fphX.t2k.a2m.gz, have 9281 columns in 39 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lm4A/nostruct-align/1lm4A.t2k.a2m.gz
# 1lm4A.t2k.a2m with 239 sequences, total weight= 38.0662 avg weight= 0.159273 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lm4A/info/1lm4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lm4A/nostruct-align/1lm4A.t2k.a2m.gz, have 9471 columns in 40 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v71A/nostruct-align/1v71A.t2k.a2m.gz
# 1v71A.t2k.a2m with 1918 sequences, total weight= 1055.77 avg weight= 0.550452 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31344 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v71A/info/1v71A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v71A/nostruct-align/1v71A.t2k.a2m.gz, have 9789 columns in 41 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1on2A/nostruct-align/1on2A.t2k.a2m.gz
# 1on2A.t2k.a2m with 314 sequences, total weight= 314 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28352 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1on2A/info/1on2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1on2A/nostruct-align/1on2A.t2k.a2m.gz, have 9924 columns in 42 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2h5oA/nostruct-align/2h5oA.t2k.a2m.gz
# 2h5oA.t2k.a2m with 554 sequences, total weight= 13.6252 avg weight= 0.0245942 36 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2h5oA/info/2h5oA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2h5oA/nostruct-align/2h5oA.t2k.a2m.gz, have 10138 columns in 43 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ohpA/nostruct-align/1ohpA.t2k.a2m.gz
# 1ohpA.t2k.a2m with 181 sequences, total weight= 181 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06004 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ohpA/info/1ohpA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1ohpA/nostruct-align/1ohpA.t2k.a2m.gz, have 10263 columns in 44 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f4pA/nostruct-align/1f4pA.t2k.a2m.gz
# 1f4pA.t2k.a2m with 307 sequences, total weight= 101.075 avg weight= 0.329233 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30284 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f4pA/info/1f4pA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1f4pA/nostruct-align/1f4pA.t2k.a2m.gz, have 10410 columns in 45 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2g84A/nostruct-align/2g84A.t2k.a2m.gz
# 2g84A.t2k.a2m with 766 sequences, total weight= 267.843 avg weight= 0.349665 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3035 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2g84A/info/2g84A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2g84A/nostruct-align/2g84A.t2k.a2m.gz, have 10599 columns in 46 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uekA/nostruct-align/1uekA.t2k.a2m.gz
# 1uekA.t2k.a2m with 245 sequences, total weight= 245 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29225 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uekA/info/1uekA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uekA/nostruct-align/1uekA.t2k.a2m.gz, have 10867 columns in 47 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bf5A/nostruct-align/2bf5A.t2k.a2m.gz
# 2bf5A.t2k.a2m with 58 sequences, total weight= 14.146 avg weight= 0.243897 30 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bf5A/info/2bf5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bf5A/nostruct-align/2bf5A.t2k.a2m.gz, have 10959 columns in 48 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2b5gA/nostruct-align/2b5gA.t2k.a2m.gz
# 2b5gA.t2k.a2m with 1183 sequences, total weight= 1183 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.935299 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2b5gA/info/2b5gA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2b5gA/nostruct-align/2b5gA.t2k.a2m.gz, have 11123 columns in 49 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g2rA/nostruct-align/1g2rA.t2k.a2m.gz
# 1g2rA.t2k.a2m with 56 sequences, total weight= 18.9162 avg weight= 0.337789 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g2rA/info/1g2rA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1g2rA/nostruct-align/1g2rA.t2k.a2m.gz, have 11217 columns in 50 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cb2A/nostruct-align/2cb2A.t2k.a2m.gz
# 2cb2A.t2k.a2m with 10 sequences, total weight= 3.3356 avg weight= 0.33356 15 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cb2A/info/2cb2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cb2A/nostruct-align/2cb2A.t2k.a2m.gz, have 11524 columns in 51 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bsnA/nostruct-align/2bsnA.t2k.a2m.gz
# 2bsnA.t2k.a2m with 166 sequences, total weight= 44.5645 avg weight= 0.268461 44 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bsnA/info/2bsnA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bsnA/nostruct-align/2bsnA.t2k.a2m.gz, have 11666 columns in 52 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cj4A/nostruct-align/2cj4A.t2k.a2m.gz
# 2cj4A.t2k.a2m with 52 sequences, total weight= 52 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08877 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cj4A/info/2cj4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cj4A/nostruct-align/2cj4A.t2k.a2m.gz, have 11813 columns in 53 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s7kA/nostruct-align/1s7kA.t2k.a2m.gz
# 1s7kA.t2k.a2m with 768 sequences, total weight= 768 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0834 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s7kA/info/1s7kA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1s7kA/nostruct-align/1s7kA.t2k.a2m.gz, have 11971 columns in 54 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2iwzA/nostruct-align/2iwzA.t2k.a2m.gz
# 2iwzA.t2k.a2m with 6250 sequences, total weight= 1835.24 avg weight= 0.293639 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.33318 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2iwzA/info/2iwzA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2iwzA/nostruct-align/2iwzA.t2k.a2m.gz, have 12397 columns in 55 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t7rA/nostruct-align/1t7rA.t2k.a2m.gz
# 1t7rA.t2k.a2m with 1326 sequences, total weight= 459.452 avg weight= 0.346494 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31751 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t7rA/info/1t7rA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1t7rA/nostruct-align/1t7rA.t2k.a2m.gz, have 12647 columns in 56 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pj5A/nostruct-align/1pj5A.t2k.a2m.gz
# 1pj5A.t2k.a2m with 1081 sequences, total weight= 1081 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15012 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pj5A/info/1pj5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pj5A/nostruct-align/1pj5A.t2k.a2m.gz, have 13474 columns in 57 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fexA/nostruct-align/2fexA.t2k.a2m.gz
# 2fexA.t2k.a2m with 839 sequences, total weight= 839 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24859 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fexA/info/2fexA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fexA/nostruct-align/2fexA.t2k.a2m.gz, have 13662 columns in 58 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2he4A/nostruct-align/2he4A.t2k.a2m.gz
# 2he4A.t2k.a2m with 5254 sequences, total weight= 320.755 avg weight= 0.0610496 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32693 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2he4A/info/2he4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2he4A/nostruct-align/2he4A.t2k.a2m.gz, have 13752 columns in 59 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1osyA/nostruct-align/1osyA.t2k.a2m.gz
# 1osyA.t2k.a2m with 4 sequences, total weight= 2.33895 avg weight= 0.584737 10 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1osyA/info/1osyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1osyA/nostruct-align/1osyA.t2k.a2m.gz, have 13866 columns in 60 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2avkA/nostruct-align/2avkA.t2k.a2m.gz
# 2avkA.t2k.a2m with 314 sequences, total weight= 314 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26729 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2avkA/info/2avkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2avkA/nostruct-align/2avkA.t2k.a2m.gz, have 13999 columns in 61 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yi9A/nostruct-align/1yi9A.t2k.a2m.gz
# 1yi9A.t2k.a2m with 144 sequences, total weight= 38.31 avg weight= 0.266042 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yi9A/info/1yi9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yi9A/nostruct-align/1yi9A.t2k.a2m.gz, have 14294 columns in 62 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bkyA/nostruct-align/2bkyA.t2k.a2m.gz
# 2bkyA.t2k.a2m with 31 sequences, total weight= 7.0697 avg weight= 0.228055 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bkyA/info/2bkyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bkyA/nostruct-align/2bkyA.t2k.a2m.gz, have 14383 columns in 63 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qu9A/nostruct-align/1qu9A.t2k.a2m.gz
# 1qu9A.t2k.a2m with 471 sequences, total weight= 142.761 avg weight= 0.303102 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30233 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qu9A/info/1qu9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qu9A/nostruct-align/1qu9A.t2k.a2m.gz, have 14510 columns in 64 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2e/2e3bA/nostruct-align/2e3bA.t2k.a2m.gz
# 2e3bA.t2k.a2m with 494 sequences, total weight= 59.1561 avg weight= 0.119749 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2e/2e3bA/info/2e3bA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2e/2e3bA/nostruct-align/2e3bA.t2k.a2m.gz, have 14846 columns in 65 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1useA/nostruct-align/1useA.t2k.a2m.gz
# 1useA.t2k.a2m with 51 sequences, total weight= 3.34705 avg weight= 0.0656284 15 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1useA/info/1useA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1useA/nostruct-align/1useA.t2k.a2m.gz, have 14886 columns in 66 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2j13A/nostruct-align/2j13A.t2k.a2m.gz
# 2j13A.t2k.a2m with 1414 sequences, total weight= 1414 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13638 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2j13A/info/2j13A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2j13A/nostruct-align/2j13A.t2k.a2m.gz, have 15093 columns in 67 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2ovjA/nostruct-align/2ovjA.t2k.a2m.gz
# 2ovjA.t2k.a2m with 2303 sequences, total weight= 2303 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27521 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2ovjA/info/2ovjA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2ovjA/nostruct-align/2ovjA.t2k.a2m.gz, have 15294 columns in 68 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fj8A/nostruct-align/2fj8A.t2k.a2m.gz
# 2fj8A.t2k.a2m with 194 sequences, total weight= 11.1894 avg weight= 0.0576771 31 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fj8A/info/2fj8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fj8A/nostruct-align/2fj8A.t2k.a2m.gz, have 15414 columns in 69 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2e/2etxA/nostruct-align/2etxA.t2k.a2m.gz
# 2etxA.t2k.a2m with 299 sequences, total weight= 299 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.99555 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2e/2etxA/info/2etxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2e/2etxA/nostruct-align/2etxA.t2k.a2m.gz, have 15608 columns in 70 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2ceyA/nostruct-align/2ceyA.t2k.a2m.gz
# 2ceyA.t2k.a2m with 948 sequences, total weight= 948 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18108 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2ceyA/info/2ceyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2ceyA/nostruct-align/2ceyA.t2k.a2m.gz, have 15914 columns in 71 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zosA/nostruct-align/1zosA.t2k.a2m.gz
# 1zosA.t2k.a2m with 819 sequences, total weight= 819 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15655 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zosA/info/1zosA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zosA/nostruct-align/1zosA.t2k.a2m.gz, have 16144 columns in 72 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cydA/nostruct-align/1cydA.t2k.a2m.gz
# 1cydA.t2k.a2m with 2363 sequences, total weight= 2363 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28736 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cydA/info/1cydA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1cydA/nostruct-align/1cydA.t2k.a2m.gz, have 16386 columns in 73 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fbhA/nostruct-align/2fbhA.t2k.a2m.gz
# 2fbhA.t2k.a2m with 1783 sequences, total weight= 1783 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1472 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fbhA/info/2fbhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fbhA/nostruct-align/2fbhA.t2k.a2m.gz, have 16523 columns in 74 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hbnC/nostruct-align/1hbnC.t2k.a2m.gz
# 1hbnC.t2k.a2m with 24 sequences, total weight= 3.03156 avg weight= 0.126315 15 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hbnC/info/1hbnC.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hbnC/nostruct-align/1hbnC.t2k.a2m.gz, have 16770 columns in 75 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2s/2spcA/nostruct-align/2spcA.t2k.a2m.gz
# 2spcA.t2k.a2m with 1000 sequences, total weight= 1000 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14604 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2s/2spcA/info/2spcA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2s/2spcA/nostruct-align/2spcA.t2k.a2m.gz, have 16877 columns in 76 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1id0A/nostruct-align/1id0A.t2k.a2m.gz
# 1id0A.t2k.a2m with 1335 sequences, total weight= 1335 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29258 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1id0A/info/1id0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1id0A/nostruct-align/1id0A.t2k.a2m.gz, have 17023 columns in 77 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a12A/nostruct-align/1a12A.t2k.a2m.gz
# 1a12A.t2k.a2m with 335 sequences, total weight= 335 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13369 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a12A/info/1a12A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1a12A/nostruct-align/1a12A.t2k.a2m.gz, have 17424 columns in 78 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1okiA/nostruct-align/1okiA.t2k.a2m.gz
# 1okiA.t2k.a2m with 241 sequences, total weight= 26.1587 avg weight= 0.108542 41 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1okiA/info/1okiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1okiA/nostruct-align/1okiA.t2k.a2m.gz, have 17607 columns in 79 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1z3eB/nostruct-align/1z3eB.t2k.a2m.gz
# 1z3eB.t2k.a2m with 503 sequences, total weight= 14.0169 avg weight= 0.0278666 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1z3eB/info/1z3eB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1z3eB/nostruct-align/1z3eB.t2k.a2m.gz, have 17674 columns in 80 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ojhA/nostruct-align/1ojhA.t2k.a2m.gz
# 1ojhA.t2k.a2m with 13 sequences, total weight= 4.01285 avg weight= 0.308681 15 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ojhA/info/1ojhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1ojhA/nostruct-align/1ojhA.t2k.a2m.gz, have 17726 columns in 81 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2iuwA/nostruct-align/2iuwA.t2k.a2m.gz
# 2iuwA.t2k.a2m with 227 sequences, total weight= 219.485 avg weight= 0.966893 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2iuwA/info/2iuwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2iuwA/nostruct-align/2iuwA.t2k.a2m.gz, have 17931 columns in 82 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bf6A/nostruct-align/1bf6A.t2k.a2m.gz
# 1bf6A.t2k.a2m with 54 sequences, total weight= 18.9677 avg weight= 0.351253 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bf6A/info/1bf6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1bf6A/nostruct-align/1bf6A.t2k.a2m.gz, have 18222 columns in 83 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2carA/nostruct-align/2carA.t2k.a2m.gz
# 2carA.t2k.a2m with 461 sequences, total weight= 38.6349 avg weight= 0.0838066 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2carA/info/2carA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2carA/nostruct-align/2carA.t2k.a2m.gz, have 18418 columns in 84 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pe1A/nostruct-align/1pe1A.t2k.a2m.gz
# 1pe1A.t2k.a2m with 250 sequences, total weight= 20.722 avg weight= 0.0828882 41 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pe1A/info/1pe1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pe1A/nostruct-align/1pe1A.t2k.a2m.gz, have 18676 columns in 85 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nv0A/nostruct-align/2nv0A.t2k.a2m.gz
# 2nv0A.t2k.a2m with 1715 sequences, total weight= 1715 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00867 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nv0A/info/2nv0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2n/2nv0A/nostruct-align/2nv0A.t2k.a2m.gz, have 18867 columns in 86 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2biiA/nostruct-align/2biiA.t2k.a2m.gz
# 2biiA.t2k.a2m with 363 sequences, total weight= 53.4862 avg weight= 0.147345 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2biiA/info/2biiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2biiA/nostruct-align/2biiA.t2k.a2m.gz, have 19282 columns in 87 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2i7gA/nostruct-align/2i7gA.t2k.a2m.gz
# 2i7gA.t2k.a2m with 1215 sequences, total weight= 1215 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10693 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2i7gA/info/2i7gA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2i7gA/nostruct-align/2i7gA.t2k.a2m.gz, have 19626 columns in 88 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jcdA/nostruct-align/1jcdA.t2k.a2m.gz
# 1jcdA.t2k.a2m with 22 sequences, total weight= 5.01331 avg weight= 0.227878 18 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jcdA/info/1jcdA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jcdA/nostruct-align/1jcdA.t2k.a2m.gz, have 19676 columns in 89 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a2pA/nostruct-align/1a2pA.t2k.a2m.gz
# 1a2pA.t2k.a2m with 75 sequences, total weight= 7.00678 avg weight= 0.0934237 22 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a2pA/info/1a2pA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1a2pA/nostruct-align/1a2pA.t2k.a2m.gz, have 19784 columns in 90 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fn9A/nostruct-align/1fn9A.t2k.a2m.gz
# 1fn9A.t2k.a2m with 52 sequences, total weight= 4.65852 avg weight= 0.089587 12 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fn9A/info/1fn9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fn9A/nostruct-align/1fn9A.t2k.a2m.gz, have 20149 columns in 91 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x88A/nostruct-align/1x88A.t2k.a2m.gz
# 1x88A.t2k.a2m with 2007 sequences, total weight= 139.924 avg weight= 0.0697179 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32447 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x88A/info/1x88A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1x88A/nostruct-align/1x88A.t2k.a2m.gz, have 20481 columns in 92 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1btkA/nostruct-align/1btkA.t2k.a2m.gz
# 1btkA.t2k.a2m with 90 sequences, total weight= 17.1487 avg weight= 0.190541 29 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1btkA/info/1btkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1btkA/nostruct-align/1btkA.t2k.a2m.gz, have 20641 columns in 93 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y0yA/nostruct-align/1y0yA.t2k.a2m.gz
# 1y0yA.t2k.a2m with 322 sequences, total weight= 322 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11055 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y0yA/info/1y0yA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1y0yA/nostruct-align/1y0yA.t2k.a2m.gz, have 20976 columns in 94 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1svfB/nostruct-align/1svfB.t2k.a2m.gz
# 1svfB.t2k.a2m with 16 sequences, total weight= 2.0136 avg weight= 0.12585 8 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1svfB/info/1svfB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1svfB/nostruct-align/1svfB.t2k.a2m.gz, have 21014 columns in 95 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1faoA/nostruct-align/1faoA.t2k.a2m.gz
# 1faoA.t2k.a2m with 441 sequences, total weight= 441 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20987 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1faoA/info/1faoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1faoA/nostruct-align/1faoA.t2k.a2m.gz, have 21114 columns in 96 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f60B/nostruct-align/1f60B.t2k.a2m.gz
# 1f60B.t2k.a2m with 126 sequences, total weight= 15.1328 avg weight= 0.120101 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f60B/info/1f60B.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1f60B/nostruct-align/1f60B.t2k.a2m.gz, have 21204 columns in 97 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mjuH/nostruct-align/1mjuH.t2k.a2m.gz
# 1mjuH.t2k.a2m with 20672 sequences, total weight= 78.5941 avg weight= 0.00380196 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30463 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mjuH/info/1mjuH.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mjuH/nostruct-align/1mjuH.t2k.a2m.gz, have 21416 columns in 98 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q7zA/nostruct-align/1q7zA.t2k.a2m.gz
# 1q7zA.t2k.a2m with 1307 sequences, total weight= 210.48 avg weight= 0.161041 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30385 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q7zA/info/1q7zA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1q7zA/nostruct-align/1q7zA.t2k.a2m.gz, have 21975 columns in 99 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l6pA/nostruct-align/1l6pA.t2k.a2m.gz
# 1l6pA.t2k.a2m with 69 sequences, total weight= 14.38 avg weight= 0.208405 36 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l6pA/info/1l6pA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1l6pA/nostruct-align/1l6pA.t2k.a2m.gz, have 22096 columns in 100 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u8vA/nostruct-align/1u8vA.t2k.a2m.gz
# 1u8vA.t2k.a2m with 73 sequences, total weight= 32.9297 avg weight= 0.451091 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u8vA/info/1u8vA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1u8vA/nostruct-align/1u8vA.t2k.a2m.gz, have 22586 columns in 101 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w5qA/nostruct-align/1w5qA.t2k.a2m.gz
# 1w5qA.t2k.a2m with 390 sequences, total weight= 9.08627 avg weight= 0.0232981 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w5qA/info/1w5qA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w5qA/nostruct-align/1w5qA.t2k.a2m.gz, have 22906 columns in 102 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zs4A/nostruct-align/1zs4A.t2k.a2m.gz
# 1zs4A.t2k.a2m with 21 sequences, total weight= 8.40626 avg weight= 0.400298 20 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zs4A/info/1zs4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zs4A/nostruct-align/1zs4A.t2k.a2m.gz, have 22988 columns in 103 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mba/nostruct-align/1mba.t2k.a2m.gz
# 1mba.t2k.a2m with 790 sequences, total weight= 148.203 avg weight= 0.187599 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30738 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mba/info/1mba.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mba/nostruct-align/1mba.t2k.a2m.gz, have 23134 columns in 104 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r5mA/nostruct-align/1r5mA.t2k.a2m.gz
# 1r5mA.t2k.a2m with 6076 sequences, total weight= 6076 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.881761 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r5mA/info/1r5mA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r5mA/nostruct-align/1r5mA.t2k.a2m.gz, have 23485 columns in 105 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b9oA/nostruct-align/1b9oA.t2k.a2m.gz
# 1b9oA.t2k.a2m with 376 sequences, total weight= 8.73074 avg weight= 0.0232201 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b9oA/info/1b9oA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1b9oA/nostruct-align/1b9oA.t2k.a2m.gz, have 23608 columns in 106 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tjxA/nostruct-align/1tjxA.t2k.a2m.gz
# 1tjxA.t2k.a2m with 2649 sequences, total weight= 2649 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19463 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tjxA/info/1tjxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tjxA/nostruct-align/1tjxA.t2k.a2m.gz, have 23764 columns in 107 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fg1A/nostruct-align/2fg1A.t2k.a2m.gz
# 2fg1A.t2k.a2m with 96 sequences, total weight= 96 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21349 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fg1A/info/2fg1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fg1A/nostruct-align/2fg1A.t2k.a2m.gz, have 23921 columns in 108 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wxcB/nostruct-align/1wxcB.t2k.a2m.gz
# 1wxcB.t2k.a2m with 14 sequences, total weight= 6.27126 avg weight= 0.447947 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wxcB/info/1wxcB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wxcB/nostruct-align/1wxcB.t2k.a2m.gz, have 23993 columns in 109 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1naqA/nostruct-align/1naqA.t2k.a2m.gz
# 1naqA.t2k.a2m with 85 sequences, total weight= 17.0831 avg weight= 0.200977 41 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1naqA/info/1naqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1naqA/nostruct-align/1naqA.t2k.a2m.gz, have 24099 columns in 110 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2frgP/nostruct-align/2frgP.t2k.a2m.gz
# 2frgP.t2k.a2m with 1475 sequences, total weight= 1475 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27498 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2frgP/info/2frgP.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2frgP/nostruct-align/2frgP.t2k.a2m.gz, have 24205 columns in 111 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uscA/nostruct-align/1uscA.t2k.a2m.gz
# 1uscA.t2k.a2m with 194 sequences, total weight= 161.979 avg weight= 0.834945 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30039 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uscA/info/1uscA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uscA/nostruct-align/1uscA.t2k.a2m.gz, have 24383 columns in 112 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j2rA/nostruct-align/1j2rA.t2k.a2m.gz
# 1j2rA.t2k.a2m with 392 sequences, total weight= 392 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2226 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j2rA/info/1j2rA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1j2rA/nostruct-align/1j2rA.t2k.a2m.gz, have 24571 columns in 113 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lkoA/nostruct-align/1lkoA.t2k.a2m.gz
# 1lkoA.t2k.a2m with 149 sequences, total weight= 93.4786 avg weight= 0.627373 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lkoA/info/1lkoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lkoA/nostruct-align/1lkoA.t2k.a2m.gz, have 24761 columns in 114 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sz7A/nostruct-align/1sz7A.t2k.a2m.gz
# 1sz7A.t2k.a2m with 97 sequences, total weight= 31.6817 avg weight= 0.326615 43 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sz7A/info/1sz7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1sz7A/nostruct-align/1sz7A.t2k.a2m.gz, have 24920 columns in 115 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nxfA/nostruct-align/2nxfA.t2k.a2m.gz
# 2nxfA.t2k.a2m with 207 sequences, total weight= 207 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.95569 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nxfA/info/2nxfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2n/2nxfA/nostruct-align/2nxfA.t2k.a2m.gz, have 25234 columns in 116 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mun/nostruct-align/1mun.t2k.a2m.gz
# 1mun.t2k.a2m with 476 sequences, total weight= 99.8588 avg weight= 0.209787 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30233 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mun/info/1mun.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mun/nostruct-align/1mun.t2k.a2m.gz, have 25459 columns in 117 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fvyA/nostruct-align/2fvyA.t2k.a2m.gz
# 2fvyA.t2k.a2m with 1112 sequences, total weight= 1112 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15342 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fvyA/info/2fvyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fvyA/nostruct-align/2fvyA.t2k.a2m.gz, have 25764 columns in 118 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54B/nostruct-align/1v54B.t2k.a2m.gz
# 1v54B.t2k.a2m with 5083 sequences, total weight= 44.8915 avg weight= 0.00883169 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3003 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54B/info/1v54B.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v54B/nostruct-align/1v54B.t2k.a2m.gz, have 25991 columns in 119 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kjwA/nostruct-align/1kjwA.t2k.a2m.gz
# 1kjwA.t2k.a2m with 554 sequences, total weight= 205.2 avg weight= 0.370397 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30292 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kjwA/info/1kjwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kjwA/nostruct-align/1kjwA.t2k.a2m.gz, have 26283 columns in 120 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zk4A/nostruct-align/1zk4A.t2k.a2m.gz
# 1zk4A.t2k.a2m with 10469 sequences, total weight= 10469 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24757 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zk4A/info/1zk4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zk4A/nostruct-align/1zk4A.t2k.a2m.gz, have 26534 columns in 121 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ymtA/nostruct-align/1ymtA.t2k.a2m.gz
# 1ymtA.t2k.a2m with 1743 sequences, total weight= 1743 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16371 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ymtA/info/1ymtA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1ymtA/nostruct-align/1ymtA.t2k.a2m.gz, have 26769 columns in 122 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o82A/nostruct-align/1o82A.t2k.a2m.gz
# 1o82A.t2k.a2m with 5 sequences, total weight= 1.83217 avg weight= 0.366434 8 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o82A/info/1o82A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1o82A/nostruct-align/1o82A.t2k.a2m.gz, have 26839 columns in 123 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1brt/nostruct-align/1brt.t2k.a2m.gz
# 1brt.t2k.a2m with 878 sequences, total weight= 878 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.825592 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1brt/info/1brt.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1brt/nostruct-align/1brt.t2k.a2m.gz, have 27116 columns in 124 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2a8yA/nostruct-align/2a8yA.t2k.a2m.gz
# 2a8yA.t2k.a2m with 494 sequences, total weight= 61.8097 avg weight= 0.125121 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30054 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2a8yA/info/2a8yA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2a8yA/nostruct-align/2a8yA.t2k.a2m.gz, have 27379 columns in 125 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m93B/nostruct-align/1m93B.t2k.a2m.gz
# 1m93B.t2k.a2m with 838 sequences, total weight= 119.637 avg weight= 0.142765 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30874 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m93B/info/1m93B.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m93B/nostruct-align/1m93B.t2k.a2m.gz, have 27624 columns in 126 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qopA/nostruct-align/1qopA.t2k.a2m.gz
# 1qopA.t2k.a2m with 291 sequences, total weight= 22.3093 avg weight= 0.0766644 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qopA/info/1qopA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qopA/nostruct-align/1qopA.t2k.a2m.gz, have 27889 columns in 127 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nrjB/nostruct-align/1nrjB.t2k.a2m.gz
# 1nrjB.t2k.a2m with 730 sequences, total weight= 730 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06659 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nrjB/info/1nrjB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nrjB/nostruct-align/1nrjB.t2k.a2m.gz, have 28080 columns in 128 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2oycA/nostruct-align/2oycA.t2k.a2m.gz
# 2oycA.t2k.a2m with 1661 sequences, total weight= 1661 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.952566 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2oycA/info/2oycA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2oycA/nostruct-align/2oycA.t2k.a2m.gz, have 28372 columns in 129 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hqxA/nostruct-align/2hqxA.t2k.a2m.gz
# 2hqxA.t2k.a2m with 552 sequences, total weight= 552 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27923 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hqxA/info/2hqxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hqxA/nostruct-align/2hqxA.t2k.a2m.gz, have 28462 columns in 130 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gvjA/nostruct-align/1gvjA.t2k.a2m.gz
# 1gvjA.t2k.a2m with 398 sequences, total weight= 27.9348 avg weight= 0.070188 45 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gvjA/info/1gvjA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gvjA/nostruct-align/1gvjA.t2k.a2m.gz, have 28603 columns in 131 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hkvA/nostruct-align/2hkvA.t2k.a2m.gz
# 2hkvA.t2k.a2m with 26 sequences, total weight= 26 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16347 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hkvA/info/2hkvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hkvA/nostruct-align/2hkvA.t2k.a2m.gz, have 28751 columns in 132 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2axoA/nostruct-align/2axoA.t2k.a2m.gz
# 2axoA.t2k.a2m with 37 sequences, total weight= 17.8877 avg weight= 0.483451 28 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2axoA/info/2axoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2axoA/nostruct-align/2axoA.t2k.a2m.gz, have 28973 columns in 133 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2d81A/nostruct-align/2d81A.t2k.a2m.gz
# 2d81A.t2k.a2m with 174 sequences, total weight= 110.349 avg weight= 0.634192 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2d81A/info/2d81A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2d81A/nostruct-align/2d81A.t2k.a2m.gz, have 29291 columns in 134 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j1nA/nostruct-align/1j1nA.t2k.a2m.gz
# 1j1nA.t2k.a2m with 98 sequences, total weight= 98 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.963126 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j1nA/info/1j1nA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1j1nA/nostruct-align/1j1nA.t2k.a2m.gz, have 29783 columns in 135 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d4tA/nostruct-align/1d4tA.t2k.a2m.gz
# 1d4tA.t2k.a2m with 656 sequences, total weight= 57.2715 avg weight= 0.0873041 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30193 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d4tA/info/1d4tA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1d4tA/nostruct-align/1d4tA.t2k.a2m.gz, have 29887 columns in 136 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kk1A/nostruct-align/1kk1A.t2k.a2m.gz
# 1kk1A.t2k.a2m with 3000 sequences, total weight= 2066.27 avg weight= 0.688756 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31018 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kk1A/info/1kk1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kk1A/nostruct-align/1kk1A.t2k.a2m.gz, have 30284 columns in 137 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1waaA/nostruct-align/1waaA.t2k.a2m.gz
# 1waaA.t2k.a2m with 1504 sequences, total weight= 1504 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26373 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1waaA/info/1waaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1waaA/nostruct-align/1waaA.t2k.a2m.gz, have 30376 columns in 138 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w3oA/nostruct-align/1w3oA.t2k.a2m.gz
# 1w3oA.t2k.a2m with 58 sequences, total weight= 39.9526 avg weight= 0.688838 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w3oA/info/1w3oA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w3oA/nostruct-align/1w3oA.t2k.a2m.gz, have 30580 columns in 139 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1us5A/nostruct-align/1us5A.t2k.a2m.gz
# 1us5A.t2k.a2m with 319 sequences, total weight= 319 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03071 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1us5A/info/1us5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1us5A/nostruct-align/1us5A.t2k.a2m.gz, have 30877 columns in 140 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f74A/nostruct-align/1f74A.t2k.a2m.gz
# 1f74A.t2k.a2m with 423 sequences, total weight= 168.154 avg weight= 0.397527 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30462 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f74A/info/1f74A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1f74A/nostruct-align/1f74A.t2k.a2m.gz, have 31170 columns in 141 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n62B/nostruct-align/1n62B.t2k.a2m.gz
# 1n62B.t2k.a2m with 486 sequences, total weight= 240.508 avg weight= 0.494873 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30363 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n62B/info/1n62B.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1n62B/nostruct-align/1n62B.t2k.a2m.gz, have 31974 columns in 142 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gb4A/nostruct-align/2gb4A.t2k.a2m.gz
# 2gb4A.t2k.a2m with 281 sequences, total weight= 223.78 avg weight= 0.796368 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30069 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gb4A/info/2gb4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gb4A/nostruct-align/2gb4A.t2k.a2m.gz, have 32205 columns in 143 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1edqA/nostruct-align/1edqA.t2k.a2m.gz
# 1edqA.t2k.a2m with 400 sequences, total weight= 334.054 avg weight= 0.835135 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30094 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1edqA/info/1edqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1edqA/nostruct-align/1edqA.t2k.a2m.gz, have 32745 columns in 144 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1ntvA/nostruct-align/1ntvA.t2k.a2m.gz
# 1ntvA.t2k.a2m with 101 sequences, total weight= 23.4883 avg weight= 0.232557 39 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1ntvA/info/1ntvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1ntvA/nostruct-align/1ntvA.t2k.a2m.gz, have 32897 columns in 145 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cdpA/nostruct-align/2cdpA.t2k.a2m.gz
# 2cdpA.t2k.a2m with 128 sequences, total weight= 128 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2068 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cdpA/info/2cdpA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cdpA/nostruct-align/2cdpA.t2k.a2m.gz, have 33035 columns in 146 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gyoA/nostruct-align/1gyoA.t2k.a2m.gz
# 1gyoA.t2k.a2m with 65 sequences, total weight= 43.2089 avg weight= 0.664753 41 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gyoA/info/1gyoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gyoA/nostruct-align/1gyoA.t2k.a2m.gz, have 33141 columns in 147 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uylA/nostruct-align/1uylA.t2k.a2m.gz
# 1uylA.t2k.a2m with 555 sequences, total weight= 24.0995 avg weight= 0.0434225 45 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uylA/info/1uylA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uylA/nostruct-align/1uylA.t2k.a2m.gz, have 33348 columns in 148 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hh8A/nostruct-align/1hh8A.t2k.a2m.gz
# 1hh8A.t2k.a2m with 386 sequences, total weight= 386 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12363 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hh8A/info/1hh8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hh8A/nostruct-align/1hh8A.t2k.a2m.gz, have 33540 columns in 149 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gxyA/nostruct-align/1gxyA.t2k.a2m.gz
# 1gxyA.t2k.a2m with 97 sequences, total weight= 10.7236 avg weight= 0.110552 28 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gxyA/info/1gxyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gxyA/nostruct-align/1gxyA.t2k.a2m.gz, have 33763 columns in 150 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xv5A/nostruct-align/1xv5A.t2k.a2m.gz
# 1xv5A.t2k.a2m with 8 sequences, total weight= 2.84052 avg weight= 0.355065 8 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xv5A/info/1xv5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xv5A/nostruct-align/1xv5A.t2k.a2m.gz, have 34164 columns in 151 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2i53A/nostruct-align/2i53A.t2k.a2m.gz
# 2i53A.t2k.a2m with 1072 sequences, total weight= 1072 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09854 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2i53A/info/2i53A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2i53A/nostruct-align/2i53A.t2k.a2m.gz, have 34418 columns in 152 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2huhA/nostruct-align/2huhA.t2k.a2m.gz
# 2huhA.t2k.a2m with 12 sequences, total weight= 3.04238 avg weight= 0.253532 13 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2huhA/info/2huhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2huhA/nostruct-align/2huhA.t2k.a2m.gz, have 34565 columns in 153 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k.a2m.gz
# 1dciA.t2k.a2m with 512 sequences, total weight= 512 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25208 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k.a2m.gz, have 34840 columns in 154 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wkaA/nostruct-align/1wkaA.t2k.a2m.gz
# 1wkaA.t2k.a2m with 1119 sequences, total weight= 62.5064 avg weight= 0.0558592 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30169 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wkaA/info/1wkaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wkaA/nostruct-align/1wkaA.t2k.a2m.gz, have 34983 columns in 155 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k6kA/nostruct-align/1k6kA.t2k.a2m.gz
# 1k6kA.t2k.a2m with 187 sequences, total weight= 74.5325 avg weight= 0.398569 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30079 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k6kA/info/1k6kA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1k6kA/nostruct-align/1k6kA.t2k.a2m.gz, have 35125 columns in 156 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fckA/nostruct-align/2fckA.t2k.a2m.gz
# 2fckA.t2k.a2m with 1198 sequences, total weight= 1198 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06295 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fckA/info/2fckA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fckA/nostruct-align/2fckA.t2k.a2m.gz, have 35299 columns in 157 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2d59A/nostruct-align/2d59A.t2k.a2m.gz
# 2d59A.t2k.a2m with 685 sequences, total weight= 88.7429 avg weight= 0.129552 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2d59A/info/2d59A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2d59A/nostruct-align/2d59A.t2k.a2m.gz, have 35440 columns in 158 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ezgA/nostruct-align/1ezgA.t2k.a2m.gz
# 1ezgA.t2k.a2m with 26 sequences, total weight= 2.4711 avg weight= 0.0950423 14 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ezgA/info/1ezgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1ezgA/nostruct-align/1ezgA.t2k.a2m.gz, have 35522 columns in 159 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n62C/nostruct-align/1n62C.t2k.a2m.gz
# 1n62C.t2k.a2m with 351 sequences, total weight= 69.0953 avg weight= 0.196853 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30127 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n62C/info/1n62C.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1n62C/nostruct-align/1n62C.t2k.a2m.gz, have 35808 columns in 160 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t3iA/nostruct-align/1t3iA.t2k.a2m.gz
# 1t3iA.t2k.a2m with 1802 sequences, total weight= 1802 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.990517 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t3iA/info/1t3iA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1t3iA/nostruct-align/1t3iA.t2k.a2m.gz, have 36214 columns in 161 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eluA/nostruct-align/1eluA.t2k.a2m.gz
# 1eluA.t2k.a2m with 360 sequences, total weight= 360 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04109 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eluA/info/1eluA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1eluA/nostruct-align/1eluA.t2k.a2m.gz, have 36595 columns in 162 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tzvA/nostruct-align/1tzvA.t2k.a2m.gz
# 1tzvA.t2k.a2m with 304 sequences, total weight= 139.455 avg weight= 0.458734 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30061 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tzvA/info/1tzvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tzvA/nostruct-align/1tzvA.t2k.a2m.gz, have 36736 columns in 163 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2g5fA/nostruct-align/2g5fA.t2k.a2m.gz
# 2g5fA.t2k.a2m with 1521 sequences, total weight= 1333.99 avg weight= 0.877045 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30342 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2g5fA/info/2g5fA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2g5fA/nostruct-align/2g5fA.t2k.a2m.gz, have 37171 columns in 164 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j8bA/nostruct-align/1j8bA.t2k.a2m.gz
# 1j8bA.t2k.a2m with 107 sequences, total weight= 18.7107 avg weight= 0.174866 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j8bA/info/1j8bA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1j8bA/nostruct-align/1j8bA.t2k.a2m.gz, have 37263 columns in 165 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2aibA/nostruct-align/2aibA.t2k.a2m.gz
# 2aibA.t2k.a2m with 138 sequences, total weight= 17.4567 avg weight= 0.126498 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2aibA/info/2aibA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2aibA/nostruct-align/2aibA.t2k.a2m.gz, have 37361 columns in 166 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1whzA/nostruct-align/1whzA.t2k.a2m.gz
# 1whzA.t2k.a2m with 72 sequences, total weight= 28.2968 avg weight= 0.393011 36 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1whzA/info/1whzA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1whzA/nostruct-align/1whzA.t2k.a2m.gz, have 37431 columns in 167 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nuyA/nostruct-align/1nuyA.t2k.a2m.gz
# 1nuyA.t2k.a2m with 246 sequences, total weight= 45.3262 avg weight= 0.184253 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nuyA/info/1nuyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nuyA/nostruct-align/1nuyA.t2k.a2m.gz, have 37759 columns in 168 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fi9A/nostruct-align/2fi9A.t2k.a2m.gz
# 2fi9A.t2k.a2m with 120 sequences, total weight= 23.5941 avg weight= 0.196618 41 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fi9A/info/2fi9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fi9A/nostruct-align/2fi9A.t2k.a2m.gz, have 37877 columns in 169 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nscA/nostruct-align/1nscA.t2k.a2m.gz
# 1nscA.t2k.a2m with 694 sequences, total weight= 5.26774 avg weight= 0.0075904 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nscA/info/1nscA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nscA/nostruct-align/1nscA.t2k.a2m.gz, have 38267 columns in 170 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2ibnA/nostruct-align/2ibnA.t2k.a2m.gz
# 2ibnA.t2k.a2m with 80 sequences, total weight= 5.27942 avg weight= 0.0659927 24 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2ibnA/info/2ibnA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2ibnA/nostruct-align/2ibnA.t2k.a2m.gz, have 38508 columns in 171 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bmoA/nostruct-align/2bmoA.t2k.a2m.gz
# 2bmoA.t2k.a2m with 947 sequences, total weight= 947 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.995256 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bmoA/info/2bmoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bmoA/nostruct-align/2bmoA.t2k.a2m.gz, have 38945 columns in 172 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j2lA/nostruct-align/1j2lA.t2k.a2m.gz
# 1j2lA.t2k.a2m with 417 sequences, total weight= 12.6134 avg weight= 0.030248 42 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j2lA/info/1j2lA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1j2lA/nostruct-align/1j2lA.t2k.a2m.gz, have 39013 columns in 173 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i1nA/nostruct-align/1i1nA.t2k.a2m.gz
# 1i1nA.t2k.a2m with 503 sequences, total weight= 503 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.944269 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i1nA/info/1i1nA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1i1nA/nostruct-align/1i1nA.t2k.a2m.gz, have 39237 columns in 174 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wv3A/nostruct-align/1wv3A.t2k.a2m.gz
# 1wv3A.t2k.a2m with 8 sequences, total weight= 3.19546 avg weight= 0.399432 10 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wv3A/info/1wv3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wv3A/nostruct-align/1wv3A.t2k.a2m.gz, have 39423 columns in 175 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2i5uA/nostruct-align/2i5uA.t2k.a2m.gz
# 2i5uA.t2k.a2m with 32 sequences, total weight= 8.05756 avg weight= 0.251799 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2i5uA/info/2i5uA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2i5uA/nostruct-align/2i5uA.t2k.a2m.gz, have 39500 columns in 176 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1to2I/nostruct-align/1to2I.t2k.a2m.gz
# 1to2I.t2k.a2m with 120 sequences, total weight= 11.434 avg weight= 0.0952831 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1to2I/info/1to2I.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1to2I/nostruct-align/1to2I.t2k.a2m.gz, have 39563 columns in 177 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1es5A/nostruct-align/1es5A.t2k.a2m.gz
# 1es5A.t2k.a2m with 348 sequences, total weight= 65.0312 avg weight= 0.186871 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30053 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1es5A/info/1es5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1es5A/nostruct-align/1es5A.t2k.a2m.gz, have 39823 columns in 178 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b9mA/nostruct-align/1b9mA.t2k.a2m.gz
# 1b9mA.t2k.a2m with 163 sequences, total weight= 73.1231 avg weight= 0.448608 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b9mA/info/1b9mA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1b9mA/nostruct-align/1b9mA.t2k.a2m.gz, have 40081 columns in 179 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m7yA/nostruct-align/1m7yA.t2k.a2m.gz
# 1m7yA.t2k.a2m with 1319 sequences, total weight= 1319 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07487 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m7yA/info/1m7yA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m7yA/nostruct-align/1m7yA.t2k.a2m.gz, have 40505 columns in 180 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k55A/nostruct-align/1k55A.t2k.a2m.gz
# 1k55A.t2k.a2m with 209 sequences, total weight= 69.3408 avg weight= 0.331774 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30037 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k55A/info/1k55A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1k55A/nostruct-align/1k55A.t2k.a2m.gz, have 40750 columns in 181 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k2xB/nostruct-align/1k2xB.t2k.a2m.gz
# 1k2xB.t2k.a2m with 116 sequences, total weight= 17.8005 avg weight= 0.153453 43 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k2xB/info/1k2xB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1k2xB/nostruct-align/1k2xB.t2k.a2m.gz, have 40885 columns in 182 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yfqA/nostruct-align/1yfqA.t2k.a2m.gz
# 1yfqA.t2k.a2m with 1156 sequences, total weight= 1156 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.988986 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yfqA/info/1yfqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yfqA/nostruct-align/1yfqA.t2k.a2m.gz, have 41227 columns in 183 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uk8A/nostruct-align/1uk8A.t2k.a2m.gz
# 1uk8A.t2k.a2m with 2541 sequences, total weight= 2541 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.866955 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uk8A/info/1uk8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uk8A/nostruct-align/1uk8A.t2k.a2m.gz, have 41498 columns in 184 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qauA/nostruct-align/1qauA.t2k.a2m.gz
# 1qauA.t2k.a2m with 1193 sequences, total weight= 537.652 avg weight= 0.450672 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31237 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qauA/info/1qauA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qauA/nostruct-align/1qauA.t2k.a2m.gz, have 41610 columns in 185 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vrmA/nostruct-align/1vrmA.t2k.a2m.gz
# 1vrmA.t2k.a2m with 192 sequences, total weight= 91.2598 avg weight= 0.475311 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30047 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vrmA/info/1vrmA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vrmA/nostruct-align/1vrmA.t2k.a2m.gz, have 41919 columns in 186 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2o37A/nostruct-align/2o37A.t2k.a2m.gz
# 2o37A.t2k.a2m with 4680 sequences, total weight= 73.1536 avg weight= 0.0156311 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30156 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2o37A/info/2o37A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2o37A/nostruct-align/2o37A.t2k.a2m.gz, have 42000 columns in 187 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ugnA/nostruct-align/1ugnA.t2k.a2m.gz
# 1ugnA.t2k.a2m with 1666 sequences, total weight= 1666 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15264 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ugnA/info/1ugnA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1ugnA/nostruct-align/1ugnA.t2k.a2m.gz, have 42186 columns in 188 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zkkA/nostruct-align/1zkkA.t2k.a2m.gz
# 1zkkA.t2k.a2m with 842 sequences, total weight= 629.233 avg weight= 0.747308 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30544 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zkkA/info/1zkkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zkkA/nostruct-align/1zkkA.t2k.a2m.gz, have 42346 columns in 189 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e6cA/nostruct-align/1e6cA.t2k.a2m.gz
# 1e6cA.t2k.a2m with 292 sequences, total weight= 292 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23915 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e6cA/info/1e6cA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1e6cA/nostruct-align/1e6cA.t2k.a2m.gz, have 42516 columns in 190 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sluA/nostruct-align/1sluA.t2k.a2m.gz
# 1sluA.t2k.a2m with 27 sequences, total weight= 4.23559 avg weight= 0.156874 17 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sluA/info/1sluA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1sluA/nostruct-align/1sluA.t2k.a2m.gz, have 42647 columns in 191 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2im9A/nostruct-align/2im9A.t2k.a2m.gz
# 2im9A.t2k.a2m with 53 sequences, total weight= 33.6133 avg weight= 0.634213 32 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2im9A/info/2im9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2im9A/nostruct-align/2im9A.t2k.a2m.gz, have 42946 columns in 192 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ojrA/nostruct-align/1ojrA.t2k.a2m.gz
# 1ojrA.t2k.a2m with 72 sequences, total weight= 36.7157 avg weight= 0.509941 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ojrA/info/1ojrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1ojrA/nostruct-align/1ojrA.t2k.a2m.gz, have 43220 columns in 193 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2axwA/nostruct-align/2axwA.t2k.a2m.gz
# 2axwA.t2k.a2m with 25 sequences, total weight= 8.38534 avg weight= 0.335413 19 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2axwA/info/2axwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2axwA/nostruct-align/2axwA.t2k.a2m.gz, have 43354 columns in 194 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vh5A/nostruct-align/1vh5A.t2k.a2m.gz
# 1vh5A.t2k.a2m with 190 sequences, total weight= 190 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29162 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vh5A/info/1vh5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vh5A/nostruct-align/1vh5A.t2k.a2m.gz, have 43492 columns in 195 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vljA/nostruct-align/1vljA.t2k.a2m.gz
# 1vljA.t2k.a2m with 650 sequences, total weight= 650 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28233 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vljA/info/1vljA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vljA/nostruct-align/1vljA.t2k.a2m.gz, have 43890 columns in 196 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2b0tA/nostruct-align/2b0tA.t2k.a2m.gz
# 2b0tA.t2k.a2m with 158 sequences, total weight= 3.96469 avg weight= 0.025093 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2b0tA/info/2b0tA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2b0tA/nostruct-align/2b0tA.t2k.a2m.gz, have 44625 columns in 197 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h4pA/nostruct-align/1h4pA.t2k.a2m.gz
# 1h4pA.t2k.a2m with 113 sequences, total weight= 113 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27451 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h4pA/info/1h4pA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h4pA/nostruct-align/1h4pA.t2k.a2m.gz, have 45033 columns in 198 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xs0A/nostruct-align/1xs0A.t2k.a2m.gz
# 1xs0A.t2k.a2m with 16 sequences, total weight= 5.76784 avg weight= 0.36049 15 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xs0A/info/1xs0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xs0A/nostruct-align/1xs0A.t2k.a2m.gz, have 45161 columns in 199 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j3wA/nostruct-align/1j3wA.t2k.a2m.gz
# 1j3wA.t2k.a2m with 36 sequences, total weight= 21.1054 avg weight= 0.586262 28 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j3wA/info/1j3wA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1j3wA/nostruct-align/1j3wA.t2k.a2m.gz, have 45295 columns in 200 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hbnB/nostruct-align/1hbnB.t2k.a2m.gz
# 1hbnB.t2k.a2m with 27 sequences, total weight= 3.28708 avg weight= 0.121744 16 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hbnB/info/1hbnB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hbnB/nostruct-align/1hbnB.t2k.a2m.gz, have 45737 columns in 201 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dmhA/nostruct-align/1dmhA.t2k.a2m.gz
# 1dmhA.t2k.a2m with 225 sequences, total weight= 54.7035 avg weight= 0.243127 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dmhA/info/1dmhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dmhA/nostruct-align/1dmhA.t2k.a2m.gz, have 46046 columns in 202 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2c1vA/nostruct-align/2c1vA.t2k.a2m.gz
# 2c1vA.t2k.a2m with 333 sequences, total weight= 291.94 avg weight= 0.876695 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30072 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2c1vA/info/2c1vA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2c1vA/nostruct-align/2c1vA.t2k.a2m.gz, have 46381 columns in 203 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wcwA/nostruct-align/1wcwA.t2k.a2m.gz
# 1wcwA.t2k.a2m with 105 sequences, total weight= 105 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21386 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wcwA/info/1wcwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wcwA/nostruct-align/1wcwA.t2k.a2m.gz, have 46635 columns in 204 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v30A/nostruct-align/1v30A.t2k.a2m.gz
# 1v30A.t2k.a2m with 58 sequences, total weight= 24.8307 avg weight= 0.428116 36 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v30A/info/1v30A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v30A/nostruct-align/1v30A.t2k.a2m.gz, have 46753 columns in 205 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ig5A/nostruct-align/1ig5A.t2k.a2m.gz
# 1ig5A.t2k.a2m with 312 sequences, total weight= 32.3501 avg weight= 0.103686 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ig5A/info/1ig5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1ig5A/nostruct-align/1ig5A.t2k.a2m.gz, have 46828 columns in 206 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zz1A/nostruct-align/1zz1A.t2k.a2m.gz
# 1zz1A.t2k.a2m with 944 sequences, total weight= 211.307 avg weight= 0.223842 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30554 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zz1A/info/1zz1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zz1A/nostruct-align/1zz1A.t2k.a2m.gz, have 47195 columns in 207 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1svsA/nostruct-align/1svsA.t2k.a2m.gz
# 1svsA.t2k.a2m with 1088 sequences, total weight= 93.5008 avg weight= 0.0859382 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30284 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1svsA/info/1svsA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1svsA/nostruct-align/1svsA.t2k.a2m.gz, have 47511 columns in 208 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pv5A/nostruct-align/1pv5A.t2k.a2m.gz
# 1pv5A.t2k.a2m with 22 sequences, total weight= 19.1829 avg weight= 0.87195 24 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pv5A/info/1pv5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pv5A/nostruct-align/1pv5A.t2k.a2m.gz, have 47772 columns in 209 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wnyA/nostruct-align/1wnyA.t2k.a2m.gz
# 1wnyA.t2k.a2m with 1610 sequences, total weight= 212.928 avg weight= 0.132254 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31754 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wnyA/info/1wnyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wnyA/nostruct-align/1wnyA.t2k.a2m.gz, have 47952 columns in 210 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gnuA/nostruct-align/1gnuA.t2k.a2m.gz
# 1gnuA.t2k.a2m with 111 sequences, total weight= 15.2467 avg weight= 0.137358 28 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gnuA/info/1gnuA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gnuA/nostruct-align/1gnuA.t2k.a2m.gz, have 48069 columns in 211 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tjyA/nostruct-align/1tjyA.t2k.a2m.gz
# 1tjyA.t2k.a2m with 465 sequences, total weight= 465 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15504 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tjyA/info/1tjyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tjyA/nostruct-align/1tjyA.t2k.a2m.gz, have 48385 columns in 212 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qwrA/nostruct-align/1qwrA.t2k.a2m.gz
# 1qwrA.t2k.a2m with 127 sequences, total weight= 47.721 avg weight= 0.375756 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qwrA/info/1qwrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qwrA/nostruct-align/1qwrA.t2k.a2m.gz, have 48700 columns in 213 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1smoA/nostruct-align/1smoA.t2k.a2m.gz
# 1smoA.t2k.a2m with 2835 sequences, total weight= 118.67 avg weight= 0.0418588 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31369 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1smoA/info/1smoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1smoA/nostruct-align/1smoA.t2k.a2m.gz, have 48813 columns in 214 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2okfA/nostruct-align/2okfA.t2k.a2m.gz
# 2okfA.t2k.a2m with 35 sequences, total weight= 8.07247 avg weight= 0.230642 23 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2okfA/info/2okfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2okfA/nostruct-align/2okfA.t2k.a2m.gz, have 48942 columns in 215 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2b9dA/nostruct-align/2b9dA.t2k.a2m.gz
# 2b9dA.t2k.a2m with 77 sequences, total weight= 8.62253 avg weight= 0.111981 35 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2b9dA/info/2b9dA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2b9dA/nostruct-align/2b9dA.t2k.a2m.gz, have 48994 columns in 216 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gcqC/nostruct-align/1gcqC.t2k.a2m.gz
# 1gcqC.t2k.a2m with 720 sequences, total weight= 63.6015 avg weight= 0.0883354 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3004 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gcqC/info/1gcqC.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gcqC/nostruct-align/1gcqC.t2k.a2m.gz, have 49063 columns in 217 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nptA/nostruct-align/2nptA.t2k.a2m.gz
# 2nptA.t2k.a2m with 26 sequences, total weight= 2.76376 avg weight= 0.106298 12 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nptA/info/2nptA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2n/2nptA/nostruct-align/2nptA.t2k.a2m.gz, have 49165 columns in 218 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nr0A/nostruct-align/1nr0A.t2k.a2m.gz
# 1nr0A.t2k.a2m with 3413 sequences, total weight= 3413 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.740607 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nr0A/info/1nr0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nr0A/nostruct-align/1nr0A.t2k.a2m.gz, have 49775 columns in 219 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vyrA/nostruct-align/1vyrA.t2k.a2m.gz
# 1vyrA.t2k.a2m with 579 sequences, total weight= 110.894 avg weight= 0.191527 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3045 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vyrA/info/1vyrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vyrA/nostruct-align/1vyrA.t2k.a2m.gz, have 50138 columns in 220 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nlnA/nostruct-align/1nlnA.t2k.a2m.gz
# 1nlnA.t2k.a2m with 40 sequences, total weight= 5.0521 avg weight= 0.126303 23 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nlnA/info/1nlnA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nlnA/nostruct-align/1nlnA.t2k.a2m.gz, have 50341 columns in 221 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2haiA/nostruct-align/2haiA.t2k.a2m.gz
# 2haiA.t2k.a2m with 4049 sequences, total weight= 53.0195 avg weight= 0.0130945 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2haiA/info/2haiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2haiA/nostruct-align/2haiA.t2k.a2m.gz, have 50903 columns in 222 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2omkA/nostruct-align/2omkA.t2k.a2m.gz
# 2omkA.t2k.a2m with 208 sequences, total weight= 162.07 avg weight= 0.779182 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30051 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2omkA/info/2omkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2omkA/nostruct-align/2omkA.t2k.a2m.gz, have 51123 columns in 223 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2dsjA/nostruct-align/2dsjA.t2k.a2m.gz
# 2dsjA.t2k.a2m with 434 sequences, total weight= 39.9324 avg weight= 0.0920102 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2dsjA/info/2dsjA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2dsjA/nostruct-align/2dsjA.t2k.a2m.gz, have 51546 columns in 224 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xpmA/nostruct-align/1xpmA.t2k.a2m.gz
# 1xpmA.t2k.a2m with 871 sequences, total weight= 295.739 avg weight= 0.33954 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3095 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xpmA/info/1xpmA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xpmA/nostruct-align/1xpmA.t2k.a2m.gz, have 51935 columns in 225 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r9dA/nostruct-align/1r9dA.t2k.a2m.gz
# 1r9dA.t2k.a2m with 131 sequences, total weight= 26.7158 avg weight= 0.203938 39 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r9dA/info/1r9dA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r9dA/nostruct-align/1r9dA.t2k.a2m.gz, have 52721 columns in 226 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dusA/nostruct-align/1dusA.t2k.a2m.gz
# 1dusA.t2k.a2m with 903 sequences, total weight= 903 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.86861 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dusA/info/1dusA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dusA/nostruct-align/1dusA.t2k.a2m.gz, have 52915 columns in 227 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2f37A/nostruct-align/2f37A.t2k.a2m.gz
# 2f37A.t2k.a2m with 7220 sequences, total weight= 7220 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15885 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2f37A/info/2f37A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2f37A/nostruct-align/2f37A.t2k.a2m.gz, have 53162 columns in 228 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bayA/nostruct-align/2bayA.t2k.a2m.gz
# 2bayA.t2k.a2m with 68 sequences, total weight= 6.25809 avg weight= 0.0920308 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bayA/info/2bayA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bayA/nostruct-align/2bayA.t2k.a2m.gz, have 53218 columns in 229 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fcoA/nostruct-align/2fcoA.t2k.a2m.gz
# 2fcoA.t2k.a2m with 89 sequences, total weight= 13.9843 avg weight= 0.157127 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fcoA/info/2fcoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fcoA/nostruct-align/2fcoA.t2k.a2m.gz, have 53372 columns in 230 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1viaA/nostruct-align/1viaA.t2k.a2m.gz
# 1viaA.t2k.a2m with 745 sequences, total weight= 745 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.971032 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1viaA/info/1viaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1viaA/nostruct-align/1viaA.t2k.a2m.gz, have 53533 columns in 231 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bz6L/nostruct-align/2bz6L.t2k.a2m.gz
# 2bz6L.t2k.a2m with 143 sequences, total weight= 5.28304 avg weight= 0.0369443 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bz6L/info/2bz6L.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bz6L/nostruct-align/2bz6L.t2k.a2m.gz, have 53586 columns in 232 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gk9B/nostruct-align/1gk9B.t2k.a2m.gz
# 1gk9B.t2k.a2m with 106 sequences, total weight= 95.1526 avg weight= 0.897666 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gk9B/info/1gk9B.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gk9B/nostruct-align/1gk9B.t2k.a2m.gz, have 54143 columns in 233 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c3pA/nostruct-align/1c3pA.t2k.a2m.gz
# 1c3pA.t2k.a2m with 430 sequences, total weight= 115.597 avg weight= 0.268829 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30114 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c3pA/info/1c3pA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1c3pA/nostruct-align/1c3pA.t2k.a2m.gz, have 54515 columns in 234 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wb4A/nostruct-align/1wb4A.t2k.a2m.gz
# 1wb4A.t2k.a2m with 112 sequences, total weight= 112 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03354 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wb4A/info/1wb4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wb4A/nostruct-align/1wb4A.t2k.a2m.gz, have 54798 columns in 235 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bqk/nostruct-align/1bqk.t2k.a2m.gz
# 1bqk.t2k.a2m with 171 sequences, total weight= 46.0689 avg weight= 0.269409 44 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bqk/info/1bqk.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1bqk/nostruct-align/1bqk.t2k.a2m.gz, have 54922 columns in 236 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2f46A/nostruct-align/2f46A.t2k.a2m.gz
# 2f46A.t2k.a2m with 135 sequences, total weight= 90.7651 avg weight= 0.672334 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2f46A/info/2f46A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2f46A/nostruct-align/2f46A.t2k.a2m.gz, have 55064 columns in 237 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hg8A/nostruct-align/1hg8A.t2k.a2m.gz
# 1hg8A.t2k.a2m with 395 sequences, total weight= 81.0901 avg weight= 0.205291 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30074 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hg8A/info/1hg8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hg8A/nostruct-align/1hg8A.t2k.a2m.gz, have 55413 columns in 238 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w6gA/nostruct-align/1w6gA.t2k.a2m.gz
# 1w6gA.t2k.a2m with 227 sequences, total weight= 64.9402 avg weight= 0.28608 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30053 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w6gA/info/1w6gA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w6gA/nostruct-align/1w6gA.t2k.a2m.gz, have 56033 columns in 239 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2grrB/nostruct-align/2grrB.t2k.a2m.gz
# 2grrB.t2k.a2m with 35 sequences, total weight= 11.1134 avg weight= 0.317527 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2grrB/info/2grrB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2grrB/nostruct-align/2grrB.t2k.a2m.gz, have 56190 columns in 240 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o66A/nostruct-align/1o66A.t2k.a2m.gz
# 1o66A.t2k.a2m with 147 sequences, total weight= 10.4205 avg weight= 0.0708875 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o66A/info/1o66A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1o66A/nostruct-align/1o66A.t2k.a2m.gz, have 56439 columns in 241 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kthA/nostruct-align/1kthA.t2k.a2m.gz
# 1kthA.t2k.a2m with 406 sequences, total weight= 30.8341 avg weight= 0.0759462 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3003 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kthA/info/1kthA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kthA/nostruct-align/1kthA.t2k.a2m.gz, have 56497 columns in 242 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fhzA/nostruct-align/2fhzA.t2k.a2m.gz
# 2fhzA.t2k.a2m with 10 sequences, total weight= 5.20791 avg weight= 0.520791 15 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fhzA/info/2fhzA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fhzA/nostruct-align/2fhzA.t2k.a2m.gz, have 56603 columns in 243 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h6lA/nostruct-align/1h6lA.t2k.a2m.gz
# 1h6lA.t2k.a2m with 29 sequences, total weight= 13.1151 avg weight= 0.452244 24 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h6lA/info/1h6lA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h6lA/nostruct-align/1h6lA.t2k.a2m.gz, have 56956 columns in 244 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gqvA/nostruct-align/1gqvA.t2k.a2m.gz
# 1gqvA.t2k.a2m with 364 sequences, total weight= 20.8712 avg weight= 0.0573385 39 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gqvA/info/1gqvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gqvA/nostruct-align/1gqvA.t2k.a2m.gz, have 57091 columns in 245 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ybiA/nostruct-align/1ybiA.t2k.a2m.gz
# 1ybiA.t2k.a2m with 122 sequences, total weight= 51.6687 avg weight= 0.423514 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ybiA/info/1ybiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1ybiA/nostruct-align/1ybiA.t2k.a2m.gz, have 57375 columns in 246 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x1iA/nostruct-align/1x1iA.t2k.a2m.gz
# 1x1iA.t2k.a2m with 98 sequences, total weight= 98 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2747 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x1iA/info/1x1iA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1x1iA/nostruct-align/1x1iA.t2k.a2m.gz, have 58127 columns in 247 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fwhA/nostruct-align/2fwhA.t2k.a2m.gz
# 2fwhA.t2k.a2m with 3166 sequences, total weight= 3166 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21136 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fwhA/info/2fwhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fwhA/nostruct-align/2fwhA.t2k.a2m.gz, have 58244 columns in 248 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2de6D/nostruct-align/2de6D.t2k.a2m.gz
# 2de6D.t2k.a2m with 1283 sequences, total weight= 1283 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.258 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2de6D/info/2de6D.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2de6D/nostruct-align/2de6D.t2k.a2m.gz, have 58348 columns in 249 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gdqA/nostruct-align/2gdqA.t2k.a2m.gz
# 2gdqA.t2k.a2m with 881 sequences, total weight= 881 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15715 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gdqA/info/2gdqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gdqA/nostruct-align/2gdqA.t2k.a2m.gz, have 58721 columns in 250 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2og1A/nostruct-align/2og1A.t2k.a2m.gz
# 2og1A.t2k.a2m with 6980 sequences, total weight= 6980 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.830006 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2og1A/info/2og1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2og1A/nostruct-align/2og1A.t2k.a2m.gz, have 59006 columns in 251 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gudA/nostruct-align/2gudA.t2k.a2m.gz
# 2gudA.t2k.a2m with 78 sequences, total weight= 78 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25852 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gudA/info/2gudA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gudA/nostruct-align/2gudA.t2k.a2m.gz, have 59127 columns in 252 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bce/nostruct-align/2bce.t2k.a2m.gz
# 2bce.t2k.a2m with 605 sequences, total weight= 605 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28566 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bce/info/2bce.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bce/nostruct-align/2bce.t2k.a2m.gz, have 59659 columns in 253 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cyyA/nostruct-align/2cyyA.t2k.a2m.gz
# 2cyyA.t2k.a2m with 2127 sequences, total weight= 410.332 avg weight= 0.192916 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32411 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cyyA/info/2cyyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cyyA/nostruct-align/2cyyA.t2k.a2m.gz, have 59810 columns in 254 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nytA/nostruct-align/1nytA.t2k.a2m.gz
# 1nytA.t2k.a2m with 350 sequences, total weight= 153.948 avg weight= 0.439852 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30303 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nytA/info/1nytA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nytA/nostruct-align/1nytA.t2k.a2m.gz, have 60081 columns in 255 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2dcfA/nostruct-align/2dcfA.t2k.a2m.gz
# 2dcfA.t2k.a2m with 1098 sequences, total weight= 1098 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04732 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2dcfA/info/2dcfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2dcfA/nostruct-align/2dcfA.t2k.a2m.gz, have 60465 columns in 256 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2ciuA/nostruct-align/2ciuA.t2k.a2m.gz
# 2ciuA.t2k.a2m with 29 sequences, total weight= 12.1813 avg weight= 0.420043 26 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2ciuA/info/2ciuA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2ciuA/nostruct-align/2ciuA.t2k.a2m.gz, have 60588 columns in 257 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qw9A/nostruct-align/1qw9A.t2k.a2m.gz
# 1qw9A.t2k.a2m with 70 sequences, total weight= 27.6705 avg weight= 0.395293 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qw9A/info/1qw9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qw9A/nostruct-align/1qw9A.t2k.a2m.gz, have 61085 columns in 258 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2ccmA/nostruct-align/2ccmA.t2k.a2m.gz
# 2ccmA.t2k.a2m with 563 sequences, total weight= 563 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16045 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2ccmA/info/2ccmA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2ccmA/nostruct-align/2ccmA.t2k.a2m.gz, have 61275 columns in 259 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zuoA/nostruct-align/1zuoA.t2k.a2m.gz
# 1zuoA.t2k.a2m with 948 sequences, total weight= 98.0209 avg weight= 0.103398 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30181 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zuoA/info/1zuoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zuoA/nostruct-align/1zuoA.t2k.a2m.gz, have 61437 columns in 260 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mb3A/nostruct-align/1mb3A.t2k.a2m.gz
# 1mb3A.t2k.a2m with 4729 sequences, total weight= 2977.5 avg weight= 0.629625 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31443 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mb3A/info/1mb3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mb3A/nostruct-align/1mb3A.t2k.a2m.gz, have 61554 columns in 261 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mixA/nostruct-align/1mixA.t2k.a2m.gz
# 1mixA.t2k.a2m with 310 sequences, total weight= 222.387 avg weight= 0.717376 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30317 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mixA/info/1mixA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mixA/nostruct-align/1mixA.t2k.a2m.gz, have 61760 columns in 262 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p1jA/nostruct-align/1p1jA.t2k.a2m.gz
# 1p1jA.t2k.a2m with 112 sequences, total weight= 24.7468 avg weight= 0.220954 32 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p1jA/info/1p1jA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1p1jA/nostruct-align/1p1jA.t2k.a2m.gz, have 62285 columns in 263 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1byi/nostruct-align/1byi.t2k.a2m.gz
# 1byi.t2k.a2m with 247 sequences, total weight= 174.477 avg weight= 0.706384 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30151 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1byi/info/1byi.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1byi/nostruct-align/1byi.t2k.a2m.gz, have 62509 columns in 264 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2g2uB/nostruct-align/2g2uB.t2k.a2m.gz
# 2g2uB.t2k.a2m with 8 sequences, total weight= 5.21627 avg weight= 0.652034 13 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2g2uB/info/2g2uB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2g2uB/nostruct-align/2g2uB.t2k.a2m.gz, have 62674 columns in 265 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cg7A/nostruct-align/2cg7A.t2k.a2m.gz
# 2cg7A.t2k.a2m with 642 sequences, total weight= 15.984 avg weight= 0.0248972 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cg7A/info/2cg7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cg7A/nostruct-align/2cg7A.t2k.a2m.gz, have 62764 columns in 266 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zkeA/nostruct-align/1zkeA.t2k.a2m.gz
# 1zkeA.t2k.a2m with 6 sequences, total weight= 2.82157 avg weight= 0.470262 10 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zkeA/info/1zkeA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zkeA/nostruct-align/1zkeA.t2k.a2m.gz, have 62845 columns in 267 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2i3hA/nostruct-align/2i3hA.t2k.a2m.gz
# 2i3hA.t2k.a2m with 686 sequences, total weight= 56.5958 avg weight= 0.0825011 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30035 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2i3hA/info/2i3hA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2i3hA/nostruct-align/2i3hA.t2k.a2m.gz, have 62935 columns in 268 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nn6A/nostruct-align/1nn6A.t2k.a2m.gz
# 1nn6A.t2k.a2m with 2421 sequences, total weight= 639.163 avg weight= 0.264008 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.33385 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nn6A/info/1nn6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nn6A/nostruct-align/1nn6A.t2k.a2m.gz, have 63157 columns in 269 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bb1B/nostruct-align/1bb1B.t2k.a2m.gz
# 1bb1B.t2k.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.544312 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bb1B/info/1bb1B.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1bb1B/nostruct-align/1bb1B.t2k.a2m.gz, have 63191 columns in 270 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2ciwA/nostruct-align/2ciwA.t2k.a2m.gz
# 2ciwA.t2k.a2m with 39 sequences, total weight= 37.2788 avg weight= 0.955867 22 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2ciwA/info/2ciwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2ciwA/nostruct-align/2ciwA.t2k.a2m.gz, have 63490 columns in 271 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gi3A/nostruct-align/2gi3A.t2k.a2m.gz
# 2gi3A.t2k.a2m with 1631 sequences, total weight= 1262.73 avg weight= 0.774204 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3063 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gi3A/info/2gi3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gi3A/nostruct-align/2gi3A.t2k.a2m.gz, have 63942 columns in 272 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bvrL/nostruct-align/2bvrL.t2k.a2m.gz
# 2bvrL.t2k.a2m with 62 sequences, total weight= 2.37626 avg weight= 0.0383268 13 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bvrL/info/2bvrL.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bvrL/nostruct-align/2bvrL.t2k.a2m.gz, have 63969 columns in 273 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1ve2A/nostruct-align/1ve2A.t2k.a2m.gz
# 1ve2A.t2k.a2m with 1018 sequences, total weight= 1018 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2961 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1ve2A/info/1ve2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1ve2A/nostruct-align/1ve2A.t2k.a2m.gz, have 64191 columns in 274 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2ou5A/nostruct-align/2ou5A.t2k.a2m.gz
# 2ou5A.t2k.a2m with 96 sequences, total weight= 90.5398 avg weight= 0.943123 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2ou5A/info/2ou5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2ou5A/nostruct-align/2ou5A.t2k.a2m.gz, have 64366 columns in 275 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hd9A/nostruct-align/2hd9A.t2k.a2m.gz
# 2hd9A.t2k.a2m with 30 sequences, total weight= 16.1126 avg weight= 0.537085 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hd9A/info/2hd9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hd9A/nostruct-align/2hd9A.t2k.a2m.gz, have 64511 columns in 276 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r0rI/nostruct-align/1r0rI.t2k.a2m.gz
# 1r0rI.t2k.a2m with 471 sequences, total weight= 43.1755 avg weight= 0.0916678 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r0rI/info/1r0rI.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r0rI/nostruct-align/1r0rI.t2k.a2m.gz, have 64562 columns in 277 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k4iA/nostruct-align/1k4iA.t2k.a2m.gz
# 1k4iA.t2k.a2m with 218 sequences, total weight= 13.2644 avg weight= 0.0608458 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k4iA/info/1k4iA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1k4iA/nostruct-align/1k4iA.t2k.a2m.gz, have 64778 columns in 278 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1z96A/nostruct-align/1z96A.t2k.a2m.gz
# 1z96A.t2k.a2m with 4 sequences, total weight= 1.83096 avg weight= 0.457741 7 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1z96A/info/1z96A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1z96A/nostruct-align/1z96A.t2k.a2m.gz, have 64816 columns in 279 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s4iA/nostruct-align/1s4iA.t2k.a2m.gz
# 1s4iA.t2k.a2m with 605 sequences, total weight= 26.1147 avg weight= 0.0431647 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s4iA/info/1s4iA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1s4iA/nostruct-align/1s4iA.t2k.a2m.gz, have 64967 columns in 280 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e7wA/nostruct-align/1e7wA.t2k.a2m.gz
# 1e7wA.t2k.a2m with 1605 sequences, total weight= 378.777 avg weight= 0.235998 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3145 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e7wA/info/1e7wA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1e7wA/nostruct-align/1e7wA.t2k.a2m.gz, have 65234 columns in 281 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2c8sA/nostruct-align/2c8sA.t2k.a2m.gz
# 2c8sA.t2k.a2m with 802 sequences, total weight= 802 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12832 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2c8sA/info/2c8sA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2c8sA/nostruct-align/2c8sA.t2k.a2m.gz, have 65383 columns in 282 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2b5wA/nostruct-align/2b5wA.t2k.a2m.gz
# 2b5wA.t2k.a2m with 2620 sequences, total weight= 2620 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20314 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2b5wA/info/2b5wA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2b5wA/nostruct-align/2b5wA.t2k.a2m.gz, have 65740 columns in 283 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t61A/nostruct-align/1t61A.t2k.a2m.gz
# 1t61A.t2k.a2m with 149 sequences, total weight= 3.75416 avg weight= 0.0251957 22 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t61A/info/1t61A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1t61A/nostruct-align/1t61A.t2k.a2m.gz, have 65963 columns in 284 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bywA/nostruct-align/2bywA.t2k.a2m.gz
# 2bywA.t2k.a2m with 3271 sequences, total weight= 542.431 avg weight= 0.16583 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.33877 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bywA/info/2bywA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bywA/nostruct-align/2bywA.t2k.a2m.gz, have 66369 columns in 285 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vflA/nostruct-align/1vflA.t2k.a2m.gz
# 1vflA.t2k.a2m with 329 sequences, total weight= 329 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2159 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vflA/info/1vflA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vflA/nostruct-align/1vflA.t2k.a2m.gz, have 66718 columns in 286 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2f1fA/nostruct-align/2f1fA.t2k.a2m.gz
# 2f1fA.t2k.a2m with 384 sequences, total weight= 22.5536 avg weight= 0.0587334 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2f1fA/info/2f1fA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2f1fA/nostruct-align/2f1fA.t2k.a2m.gz, have 66881 columns in 287 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zmmA/nostruct-align/1zmmA.t2k.a2m.gz
# 1zmmA.t2k.a2m with 4 sequences, total weight= 1.55858 avg weight= 0.389646 6 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zmmA/info/1zmmA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zmmA/nostruct-align/1zmmA.t2k.a2m.gz, have 66912 columns in 288 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nthA/nostruct-align/1nthA.t2k.a2m.gz
# 1nthA.t2k.a2m with 17 sequences, total weight= 2.38161 avg weight= 0.140095 8 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nthA/info/1nthA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nthA/nostruct-align/1nthA.t2k.a2m.gz, have 67369 columns in 289 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kgdA/nostruct-align/1kgdA.t2k.a2m.gz
# 1kgdA.t2k.a2m with 420 sequences, total weight= 52.4353 avg weight= 0.124846 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30057 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kgdA/info/1kgdA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kgdA/nostruct-align/1kgdA.t2k.a2m.gz, have 67544 columns in 290 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1px5A/nostruct-align/1px5A.t2k.a2m.gz
# 1px5A.t2k.a2m with 103 sequences, total weight= 11.4617 avg weight= 0.111279 30 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1px5A/info/1px5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1px5A/nostruct-align/1px5A.t2k.a2m.gz, have 67873 columns in 291 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2furA/nostruct-align/2furA.t2k.a2m.gz
# 2furA.t2k.a2m with 104 sequences, total weight= 52.4694 avg weight= 0.504514 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2furA/info/2furA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2furA/nostruct-align/2furA.t2k.a2m.gz, have 68066 columns in 292 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i1jA/nostruct-align/1i1jA.t2k.a2m.gz
# 1i1jA.t2k.a2m with 204 sequences, total weight= 64.9549 avg weight= 0.318406 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i1jA/info/1i1jA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1i1jA/nostruct-align/1i1jA.t2k.a2m.gz, have 68172 columns in 293 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fojA/nostruct-align/2fojA.t2k.a2m.gz
# 2fojA.t2k.a2m with 374 sequences, total weight= 374 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20113 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fojA/info/2fojA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fojA/nostruct-align/2fojA.t2k.a2m.gz, have 68309 columns in 294 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zzmA/nostruct-align/1zzmA.t2k.a2m.gz
# 1zzmA.t2k.a2m with 629 sequences, total weight= 281.837 avg weight= 0.448071 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30883 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zzmA/info/1zzmA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zzmA/nostruct-align/1zzmA.t2k.a2m.gz, have 68568 columns in 295 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2ivxA/nostruct-align/2ivxA.t2k.a2m.gz
# 2ivxA.t2k.a2m with 690 sequences, total weight= 690 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0767 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2ivxA/info/2ivxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2ivxA/nostruct-align/2ivxA.t2k.a2m.gz, have 68824 columns in 296 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2i74A/nostruct-align/2i74A.t2k.a2m.gz
# 2i74A.t2k.a2m with 64 sequences, total weight= 33.6293 avg weight= 0.525458 32 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2i74A/info/2i74A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2i74A/nostruct-align/2i74A.t2k.a2m.gz, have 69004 columns in 297 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fh1A/nostruct-align/2fh1A.t2k.a2m.gz
# 2fh1A.t2k.a2m with 678 sequences, total weight= 296.348 avg weight= 0.437091 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31004 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fh1A/info/2fh1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fh1A/nostruct-align/2fh1A.t2k.a2m.gz, have 69325 columns in 298 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yrcA/nostruct-align/1yrcA.t2k.a2m.gz
# 1yrcA.t2k.a2m with 1471 sequences, total weight= 1471 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1323 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yrcA/info/1yrcA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yrcA/nostruct-align/1yrcA.t2k.a2m.gz, have 69730 columns in 299 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ry6A/nostruct-align/1ry6A.t2k.a2m.gz
# 1ry6A.t2k.a2m with 1071 sequences, total weight= 44.9393 avg weight= 0.0419601 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30163 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ry6A/info/1ry6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1ry6A/nostruct-align/1ry6A.t2k.a2m.gz, have 70049 columns in 300 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b9wA/nostruct-align/1b9wA.t2k.a2m.gz
# 1b9wA.t2k.a2m with 624 sequences, total weight= 88.1699 avg weight= 0.141298 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30278 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b9wA/info/1b9wA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1b9wA/nostruct-align/1b9wA.t2k.a2m.gz, have 70138 columns in 301 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1di6A/nostruct-align/1di6A.t2k.a2m.gz
# 1di6A.t2k.a2m with 244 sequences, total weight= 102.297 avg weight= 0.419251 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1di6A/info/1di6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1di6A/nostruct-align/1di6A.t2k.a2m.gz, have 70321 columns in 302 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2g9wA/nostruct-align/2g9wA.t2k.a2m.gz
# 2g9wA.t2k.a2m with 214 sequences, total weight= 78.2238 avg weight= 0.365532 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.301 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2g9wA/info/2g9wA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2g9wA/nostruct-align/2g9wA.t2k.a2m.gz, have 70440 columns in 303 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b0b/nostruct-align/1b0b.t2k.a2m.gz
# 1b0b.t2k.a2m with 600 sequences, total weight= 162.875 avg weight= 0.271459 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31203 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b0b/info/1b0b.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1b0b/nostruct-align/1b0b.t2k.a2m.gz, have 70582 columns in 304 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n7sC/nostruct-align/1n7sC.t2k.a2m.gz
# 1n7sC.t2k.a2m with 46 sequences, total weight= 9.01779 avg weight= 0.196039 23 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n7sC/info/1n7sC.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1n7sC/nostruct-align/1n7sC.t2k.a2m.gz, have 70661 columns in 305 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k7cA/nostruct-align/1k7cA.t2k.a2m.gz
# 1k7cA.t2k.a2m with 42 sequences, total weight= 23.7819 avg weight= 0.566235 31 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k7cA/info/1k7cA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1k7cA/nostruct-align/1k7cA.t2k.a2m.gz, have 70894 columns in 306 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2oc5A/nostruct-align/2oc5A.t2k.a2m.gz
# 2oc5A.t2k.a2m with 40 sequences, total weight= 3.31767 avg weight= 0.0829417 17 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2oc5A/info/2oc5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2oc5A/nostruct-align/2oc5A.t2k.a2m.gz, have 71116 columns in 307 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jy2O/nostruct-align/1jy2O.t2k.a2m.gz
# 1jy2O.t2k.a2m with 20 sequences, total weight= 3.02919 avg weight= 0.15146 17 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jy2O/info/1jy2O.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jy2O/nostruct-align/1jy2O.t2k.a2m.gz, have 71167 columns in 308 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1ml4A/nostruct-align/1ml4A.t2k.a2m.gz
# 1ml4A.t2k.a2m with 453 sequences, total weight= 36.5122 avg weight= 0.0806009 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1ml4A/info/1ml4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1ml4A/nostruct-align/1ml4A.t2k.a2m.gz, have 71474 columns in 309 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1anf/nostruct-align/1anf.t2k.a2m.gz
# 1anf.t2k.a2m with 620 sequences, total weight= 620 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.916466 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1anf/info/1anf.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1anf/nostruct-align/1anf.t2k.a2m.gz, have 71844 columns in 310 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m1fA/nostruct-align/1m1fA.t2k.a2m.gz
# 1m1fA.t2k.a2m with 90 sequences, total weight= 35.2894 avg weight= 0.392104 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m1fA/info/1m1fA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m1fA/nostruct-align/1m1fA.t2k.a2m.gz, have 71951 columns in 311 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u5dA/nostruct-align/1u5dA.t2k.a2m.gz
# 1u5dA.t2k.a2m with 1920 sequences, total weight= 1920 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06427 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u5dA/info/1u5dA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1u5dA/nostruct-align/1u5dA.t2k.a2m.gz, have 72059 columns in 312 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qhoA/nostruct-align/1qhoA.t2k.a2m.gz
# 1qhoA.t2k.a2m with 772 sequences, total weight= 772 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23051 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qhoA/info/1qhoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qhoA/nostruct-align/1qhoA.t2k.a2m.gz, have 72745 columns in 313 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yacA/nostruct-align/1yacA.t2k.a2m.gz
# 1yacA.t2k.a2m with 364 sequences, total weight= 267.51 avg weight= 0.734919 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30148 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yacA/info/1yacA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yacA/nostruct-align/1yacA.t2k.a2m.gz, have 72949 columns in 314 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1ta3A/nostruct-align/1ta3A.t2k.a2m.gz
# 1ta3A.t2k.a2m with 184 sequences, total weight= 24.9764 avg weight= 0.135741 44 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1ta3A/info/1ta3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1ta3A/nostruct-align/1ta3A.t2k.a2m.gz, have 73223 columns in 315 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p3cA/nostruct-align/1p3cA.t2k.a2m.gz
# 1p3cA.t2k.a2m with 896 sequences, total weight= 896 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18716 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p3cA/info/1p3cA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1p3cA/nostruct-align/1p3cA.t2k.a2m.gz, have 73438 columns in 316 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o7qA/nostruct-align/1o7qA.t2k.a2m.gz
# 1o7qA.t2k.a2m with 160 sequences, total weight= 8.03253 avg weight= 0.0502033 26 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o7qA/info/1o7qA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1o7qA/nostruct-align/1o7qA.t2k.a2m.gz, have 73725 columns in 317 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nyuA/nostruct-align/2nyuA.t2k.a2m.gz
# 2nyuA.t2k.a2m with 693 sequences, total weight= 145.194 avg weight= 0.209515 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31073 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nyuA/info/2nyuA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2n/2nyuA/nostruct-align/2nyuA.t2k.a2m.gz, have 73906 columns in 318 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2f22A/nostruct-align/2f22A.t2k.a2m.gz
# 2f22A.t2k.a2m with 22 sequences, total weight= 22 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2857 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2f22A/info/2f22A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2f22A/nostruct-align/2f22A.t2k.a2m.gz, have 74048 columns in 319 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kq3A/nostruct-align/1kq3A.t2k.a2m.gz
# 1kq3A.t2k.a2m with 302 sequences, total weight= 302 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21812 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kq3A/info/1kq3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kq3A/nostruct-align/1kq3A.t2k.a2m.gz, have 74412 columns in 320 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bbhA/nostruct-align/1bbhA.t2k.a2m.gz
# 1bbhA.t2k.a2m with 60 sequences, total weight= 27.4053 avg weight= 0.456754 39 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bbhA/info/1bbhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1bbhA/nostruct-align/1bbhA.t2k.a2m.gz, have 74543 columns in 321 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uxzA/nostruct-align/1uxzA.t2k.a2m.gz
# 1uxzA.t2k.a2m with 192 sequences, total weight= 111.917 avg weight= 0.582899 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30046 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uxzA/info/1uxzA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uxzA/nostruct-align/1uxzA.t2k.a2m.gz, have 74674 columns in 322 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wubA/nostruct-align/1wubA.t2k.a2m.gz
# 1wubA.t2k.a2m with 215 sequences, total weight= 76.3026 avg weight= 0.354896 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3008 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wubA/info/1wubA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wubA/nostruct-align/1wubA.t2k.a2m.gz, have 74850 columns in 323 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hlqA/nostruct-align/1hlqA.t2k.a2m.gz
# 1hlqA.t2k.a2m with 28 sequences, total weight= 7.00138 avg weight= 0.250049 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hlqA/info/1hlqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hlqA/nostruct-align/1hlqA.t2k.a2m.gz, have 74925 columns in 324 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h72C/nostruct-align/1h72C.t2k.a2m.gz
# 1h72C.t2k.a2m with 424 sequences, total weight= 424 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07181 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h72C/info/1h72C.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h72C/nostruct-align/1h72C.t2k.a2m.gz, have 75221 columns in 325 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2as9A/nostruct-align/2as9A.t2k.a2m.gz
# 2as9A.t2k.a2m with 411 sequences, total weight= 225.434 avg weight= 0.5485 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30184 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2as9A/info/2as9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2as9A/nostruct-align/2as9A.t2k.a2m.gz, have 75428 columns in 326 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2ag4A/nostruct-align/2ag4A.t2k.a2m.gz
# 2ag4A.t2k.a2m with 55 sequences, total weight= 22.3848 avg weight= 0.406996 31 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2ag4A/info/2ag4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2ag4A/nostruct-align/2ag4A.t2k.a2m.gz, have 75592 columns in 327 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fozA/nostruct-align/2fozA.t2k.a2m.gz
# 2fozA.t2k.a2m with 206 sequences, total weight= 206 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11983 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fozA/info/2fozA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fozA/nostruct-align/2fozA.t2k.a2m.gz, have 75931 columns in 328 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lfwA/nostruct-align/1lfwA.t2k.a2m.gz
# 1lfwA.t2k.a2m with 361 sequences, total weight= 361 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06737 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lfwA/info/1lfwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lfwA/nostruct-align/1lfwA.t2k.a2m.gz, have 76399 columns in 329 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gs5A/nostruct-align/1gs5A.t2k.a2m.gz
# 1gs5A.t2k.a2m with 503 sequences, total weight= 503 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26473 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gs5A/info/1gs5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gs5A/nostruct-align/1gs5A.t2k.a2m.gz, have 76657 columns in 330 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k.a2m.gz
# 7odcA.t2k.a2m with 482 sequences, total weight= 307.554 avg weight= 0.638078 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30388 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/7o/7odcA/info/7odcA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k.a2m.gz, have 77044 columns in 331 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w6sA/nostruct-align/1w6sA.t2k.a2m.gz
# 1w6sA.t2k.a2m with 520 sequences, total weight= 520 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20892 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w6sA/info/1w6sA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w6sA/nostruct-align/1w6sA.t2k.a2m.gz, have 77639 columns in 332 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rm6A/nostruct-align/1rm6A.t2k.a2m.gz
# 1rm6A.t2k.a2m with 842 sequences, total weight= 291.472 avg weight= 0.346167 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31034 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rm6A/info/1rm6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rm6A/nostruct-align/1rm6A.t2k.a2m.gz, have 78400 columns in 333 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nls/nostruct-align/1nls.t2k.a2m.gz
# 1nls.t2k.a2m with 516 sequences, total weight= 52.597 avg weight= 0.101932 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nls/info/1nls.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nls/nostruct-align/1nls.t2k.a2m.gz, have 78637 columns in 334 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fb6A/nostruct-align/2fb6A.t2k.a2m.gz
# 2fb6A.t2k.a2m with 11 sequences, total weight= 10.841 avg weight= 0.985547 14 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fb6A/info/2fb6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fb6A/nostruct-align/2fb6A.t2k.a2m.gz, have 78753 columns in 335 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d8wA/nostruct-align/1d8wA.t2k.a2m.gz
# 1d8wA.t2k.a2m with 31 sequences, total weight= 5.9725 avg weight= 0.192661 20 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d8wA/info/1d8wA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1d8wA/nostruct-align/1d8wA.t2k.a2m.gz, have 79155 columns in 336 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mtzA/nostruct-align/1mtzA.t2k.a2m.gz
# 1mtzA.t2k.a2m with 1316 sequences, total weight= 1316 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.794164 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mtzA/info/1mtzA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mtzA/nostruct-align/1mtzA.t2k.a2m.gz, have 79445 columns in 337 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2a61A/nostruct-align/2a61A.t2k.a2m.gz
# 2a61A.t2k.a2m with 1913 sequences, total weight= 1913 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12377 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2a61A/info/2a61A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2a61A/nostruct-align/2a61A.t2k.a2m.gz, have 79587 columns in 338 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zuwA/nostruct-align/1zuwA.t2k.a2m.gz
# 1zuwA.t2k.a2m with 542 sequences, total weight= 96.7481 avg weight= 0.178502 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30266 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zuwA/info/1zuwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zuwA/nostruct-align/1zuwA.t2k.a2m.gz, have 79848 columns in 339 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zhxA/nostruct-align/1zhxA.t2k.a2m.gz
# 1zhxA.t2k.a2m with 468 sequences, total weight= 134.289 avg weight= 0.286943 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30108 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zhxA/info/1zhxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zhxA/nostruct-align/1zhxA.t2k.a2m.gz, have 80284 columns in 340 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2c92A/nostruct-align/2c92A.t2k.a2m.gz
# 2c92A.t2k.a2m with 625 sequences, total weight= 23.4705 avg weight= 0.0375529 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2c92A/info/2c92A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2c92A/nostruct-align/2c92A.t2k.a2m.gz, have 80431 columns in 341 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xx1A/nostruct-align/1xx1A.t2k.a2m.gz
# 1xx1A.t2k.a2m with 79 sequences, total weight= 15.519 avg weight= 0.196444 20 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xx1A/info/1xx1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xx1A/nostruct-align/1xx1A.t2k.a2m.gz, have 80716 columns in 342 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1ltzA/nostruct-align/1ltzA.t2k.a2m.gz
# 1ltzA.t2k.a2m with 128 sequences, total weight= 13.8426 avg weight= 0.108145 32 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1ltzA/info/1ltzA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1ltzA/nostruct-align/1ltzA.t2k.a2m.gz, have 80990 columns in 343 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yn9A/nostruct-align/1yn9A.t2k.a2m.gz
# 1yn9A.t2k.a2m with 789 sequences, total weight= 789 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20621 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yn9A/info/1yn9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yn9A/nostruct-align/1yn9A.t2k.a2m.gz, have 81158 columns in 344 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jhdA/nostruct-align/1jhdA.t2k.a2m.gz
# 1jhdA.t2k.a2m with 131 sequences, total weight= 21.1709 avg weight= 0.16161 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jhdA/info/1jhdA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jhdA/nostruct-align/1jhdA.t2k.a2m.gz, have 81554 columns in 345 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zr6A/nostruct-align/1zr6A.t2k.a2m.gz
# 1zr6A.t2k.a2m with 556 sequences, total weight= 556 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.851601 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zr6A/info/1zr6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zr6A/nostruct-align/1zr6A.t2k.a2m.gz, have 82033 columns in 346 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tgxA/nostruct-align/1tgxA.t2k.a2m.gz
# 1tgxA.t2k.a2m with 340 sequences, total weight= 16.7786 avg weight= 0.0493489 44 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tgxA/info/1tgxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tgxA/nostruct-align/1tgxA.t2k.a2m.gz, have 82093 columns in 347 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fqpA/nostruct-align/2fqpA.t2k.a2m.gz
# 2fqpA.t2k.a2m with 108 sequences, total weight= 65.1495 avg weight= 0.603236 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fqpA/info/2fqpA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fqpA/nostruct-align/2fqpA.t2k.a2m.gz, have 82188 columns in 348 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2dkhA/nostruct-align/2dkhA.t2k.a2m.gz
# 2dkhA.t2k.a2m with 2617 sequences, total weight= 2617 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.843907 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2dkhA/info/2dkhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2dkhA/nostruct-align/2dkhA.t2k.a2m.gz, have 82802 columns in 349 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fq4A/nostruct-align/2fq4A.t2k.a2m.gz
# 2fq4A.t2k.a2m with 2658 sequences, total weight= 2658 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.840072 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fq4A/info/2fq4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fq4A/nostruct-align/2fq4A.t2k.a2m.gz, have 82986 columns in 350 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xzzA/nostruct-align/1xzzA.t2k.a2m.gz
# 1xzzA.t2k.a2m with 128 sequences, total weight= 13.8027 avg weight= 0.107834 24 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xzzA/info/1xzzA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xzzA/nostruct-align/1xzzA.t2k.a2m.gz, have 83202 columns in 351 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1ws8A/nostruct-align/1ws8A.t2k.a2m.gz
# 1ws8A.t2k.a2m with 175 sequences, total weight= 24.2625 avg weight= 0.138643 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1ws8A/info/1ws8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1ws8A/nostruct-align/1ws8A.t2k.a2m.gz, have 83306 columns in 352 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r45A/nostruct-align/1r45A.t2k.a2m.gz
# 1r45A.t2k.a2m with 54 sequences, total weight= 36.3775 avg weight= 0.673658 39 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r45A/info/1r45A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r45A/nostruct-align/1r45A.t2k.a2m.gz, have 83507 columns in 353 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qf9A/nostruct-align/1qf9A.t2k.a2m.gz
# 1qf9A.t2k.a2m with 617 sequences, total weight= 617 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17658 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qf9A/info/1qf9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qf9A/nostruct-align/1qf9A.t2k.a2m.gz, have 83701 columns in 354 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2aj7A/nostruct-align/2aj7A.t2k.a2m.gz
# 2aj7A.t2k.a2m with 57 sequences, total weight= 26.9934 avg weight= 0.473569 35 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2aj7A/info/2aj7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2aj7A/nostruct-align/2aj7A.t2k.a2m.gz, have 83858 columns in 355 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yleA/nostruct-align/1yleA.t2k.a2m.gz
# 1yleA.t2k.a2m with 54 sequences, total weight= 8.04174 avg weight= 0.148921 29 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yleA/info/1yleA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yleA/nostruct-align/1yleA.t2k.a2m.gz, have 84188 columns in 356 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yd0A/nostruct-align/1yd0A.t2k.a2m.gz
# 1yd0A.t2k.a2m with 337 sequences, total weight= 21.968 avg weight= 0.065187 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yd0A/info/1yd0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yd0A/nostruct-align/1yd0A.t2k.a2m.gz, have 84277 columns in 357 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m55A/nostruct-align/1m55A.t2k.a2m.gz
# 1m55A.t2k.a2m with 28 sequences, total weight= 13.202 avg weight= 0.471501 24 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m55A/info/1m55A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m55A/nostruct-align/1m55A.t2k.a2m.gz, have 84470 columns in 358 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o7iA/nostruct-align/1o7iA.t2k.a2m.gz
# 1o7iA.t2k.a2m with 102 sequences, total weight= 89.6194 avg weight= 0.878622 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o7iA/info/1o7iA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1o7iA/nostruct-align/1o7iA.t2k.a2m.gz, have 84585 columns in 359 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n93X/nostruct-align/1n93X.t2k.a2m.gz
# 1n93X.t2k.a2m with 37 sequences, total weight= 5.27156 avg weight= 0.142475 14 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n93X/info/1n93X.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1n93X/nostruct-align/1n93X.t2k.a2m.gz, have 84920 columns in 360 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xpcA/nostruct-align/1xpcA.t2k.a2m.gz
# 1xpcA.t2k.a2m with 1644 sequences, total weight= 1644 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28821 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xpcA/info/1xpcA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xpcA/nostruct-align/1xpcA.t2k.a2m.gz, have 85165 columns in 361 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tw9A/nostruct-align/1tw9A.t2k.a2m.gz
# 1tw9A.t2k.a2m with 1264 sequences, total weight= 1264 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19637 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tw9A/info/1tw9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tw9A/nostruct-align/1tw9A.t2k.a2m.gz, have 85356 columns in 362 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a9xA/nostruct-align/1a9xA.t2k.a2m.gz
# 1a9xA.t2k.a2m with 362 sequences, total weight= 58.9787 avg weight= 0.162924 44 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a9xA/info/1a9xA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1a9xA/nostruct-align/1a9xA.t2k.a2m.gz, have 86414 columns in 363 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r5rA/nostruct-align/1r5rA.t2k.a2m.gz
# 1r5rA.t2k.a2m with 175 sequences, total weight= 175 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17341 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r5rA/info/1r5rA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r5rA/nostruct-align/1r5rA.t2k.a2m.gz, have 86531 columns in 364 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2ikkA/nostruct-align/2ikkA.t2k.a2m.gz
# 2ikkA.t2k.a2m with 611 sequences, total weight= 611 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23809 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2ikkA/info/2ikkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2ikkA/nostruct-align/2ikkA.t2k.a2m.gz, have 86677 columns in 365 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kzqA/nostruct-align/1kzqA.t2k.a2m.gz
# 1kzqA.t2k.a2m with 39 sequences, total weight= 15.0512 avg weight= 0.385929 30 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kzqA/info/1kzqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kzqA/nostruct-align/1kzqA.t2k.a2m.gz, have 86930 columns in 366 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yqzA/nostruct-align/1yqzA.t2k.a2m.gz
# 1yqzA.t2k.a2m with 4603 sequences, total weight= 4603 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1239 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yqzA/info/1yqzA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yqzA/nostruct-align/1yqzA.t2k.a2m.gz, have 87367 columns in 367 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ow1A/nostruct-align/1ow1A.t2k.a2m.gz
# 1ow1A.t2k.a2m with 46 sequences, total weight= 6.84815 avg weight= 0.148873 22 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ow1A/info/1ow1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1ow1A/nostruct-align/1ow1A.t2k.a2m.gz, have 87534 columns in 368 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2oh1A/nostruct-align/2oh1A.t2k.a2m.gz
# 2oh1A.t2k.a2m with 452 sequences, total weight= 452 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0862 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2oh1A/info/2oh1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2oh1A/nostruct-align/2oh1A.t2k.a2m.gz, have 87709 columns in 369 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m1nB/nostruct-align/1m1nB.t2k.a2m.gz
# 1m1nB.t2k.a2m with 339 sequences, total weight= 254.264 avg weight= 0.75004 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30146 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m1nB/info/1m1nB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m1nB/nostruct-align/1m1nB.t2k.a2m.gz, have 88231 columns in 370 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2a6zA/nostruct-align/2a6zA.t2k.a2m.gz
# 2a6zA.t2k.a2m with 45 sequences, total weight= 28.437 avg weight= 0.631934 36 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2a6zA/info/2a6zA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2a6zA/nostruct-align/2a6zA.t2k.a2m.gz, have 88453 columns in 371 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iirA/nostruct-align/1iirA.t2k.a2m.gz
# 1iirA.t2k.a2m with 325 sequences, total weight= 325 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07461 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iirA/info/1iirA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1iirA/nostruct-align/1iirA.t2k.a2m.gz, have 88835 columns in 372 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qw2A/nostruct-align/1qw2A.t2k.a2m.gz
# 1qw2A.t2k.a2m with 15 sequences, total weight= 6.39116 avg weight= 0.426077 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qw2A/info/1qw2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qw2A/nostruct-align/1qw2A.t2k.a2m.gz, have 88937 columns in 373 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j58A/nostruct-align/1j58A.t2k.a2m.gz
# 1j58A.t2k.a2m with 443 sequences, total weight= 240.541 avg weight= 0.542983 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30133 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j58A/info/1j58A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1j58A/nostruct-align/1j58A.t2k.a2m.gz, have 89309 columns in 374 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54D/nostruct-align/1v54D.t2k.a2m.gz
# 1v54D.t2k.a2m with 56 sequences, total weight= 11.8933 avg weight= 0.212381 24 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54D/info/1v54D.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v54D/nostruct-align/1v54D.t2k.a2m.gz, have 89453 columns in 375 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2j0aA/nostruct-align/2j0aA.t2k.a2m.gz
# 2j0aA.t2k.a2m with 318 sequences, total weight= 318 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23158 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2j0aA/info/2j0aA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2j0aA/nostruct-align/2j0aA.t2k.a2m.gz, have 89696 columns in 376 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wrdA/nostruct-align/1wrdA.t2k.a2m.gz
# 1wrdA.t2k.a2m with 172 sequences, total weight= 21.3771 avg weight= 0.124285 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wrdA/info/1wrdA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wrdA/nostruct-align/1wrdA.t2k.a2m.gz, have 89794 columns in 377 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tt8A/nostruct-align/1tt8A.t2k.a2m.gz
# 1tt8A.t2k.a2m with 66 sequences, total weight= 31.1322 avg weight= 0.471699 43 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tt8A/info/1tt8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tt8A/nostruct-align/1tt8A.t2k.a2m.gz, have 89958 columns in 378 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2d1cA/nostruct-align/2d1cA.t2k.a2m.gz
# 2d1cA.t2k.a2m with 2055 sequences, total weight= 80.035 avg weight= 0.0389465 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3004 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2d1cA/info/2d1cA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2d1cA/nostruct-align/2d1cA.t2k.a2m.gz, have 90453 columns in 379 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pbyC/nostruct-align/1pbyC.t2k.a2m.gz
# 1pbyC.t2k.a2m with 21 sequences, total weight= 2.73057 avg weight= 0.130027 16 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pbyC/info/1pbyC.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pbyC/nostruct-align/1pbyC.t2k.a2m.gz, have 90532 columns in 380 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fhpA/nostruct-align/2fhpA.t2k.a2m.gz
# 2fhpA.t2k.a2m with 1525 sequences, total weight= 1525 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15253 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fhpA/info/2fhpA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fhpA/nostruct-align/2fhpA.t2k.a2m.gz, have 90715 columns in 381 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x6zA/nostruct-align/1x6zA.t2k.a2m.gz
# 1x6zA.t2k.a2m with 115 sequences, total weight= 40.9473 avg weight= 0.356063 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x6zA/info/1x6zA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1x6zA/nostruct-align/1x6zA.t2k.a2m.gz, have 90834 columns in 382 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wwzA/nostruct-align/1wwzA.t2k.a2m.gz
# 1wwzA.t2k.a2m with 1907 sequences, total weight= 1907 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.918166 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wwzA/info/1wwzA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wwzA/nostruct-align/1wwzA.t2k.a2m.gz, have 90991 columns in 383 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1llnA/nostruct-align/1llnA.t2k.a2m.gz
# 1llnA.t2k.a2m with 257 sequences, total weight= 51.6719 avg weight= 0.201058 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1llnA/info/1llnA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1llnA/nostruct-align/1llnA.t2k.a2m.gz, have 91253 columns in 384 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1amf/nostruct-align/1amf.t2k.a2m.gz
# 1amf.t2k.a2m with 202 sequences, total weight= 202 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17119 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1amf/info/1amf.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1amf/nostruct-align/1amf.t2k.a2m.gz, have 91484 columns in 385 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2j1pA/nostruct-align/2j1pA.t2k.a2m.gz
# 2j1pA.t2k.a2m with 1849 sequences, total weight= 553.959 avg weight= 0.299599 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31932 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2j1pA/info/2j1pA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2j1pA/nostruct-align/2j1pA.t2k.a2m.gz, have 91760 columns in 386 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yrkA/nostruct-align/1yrkA.t2k.a2m.gz
# 1yrkA.t2k.a2m with 70 sequences, total weight= 18.9427 avg weight= 0.27061 29 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yrkA/info/1yrkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yrkA/nostruct-align/1yrkA.t2k.a2m.gz, have 91886 columns in 387 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ur1A/nostruct-align/1ur1A.t2k.a2m.gz
# 1ur1A.t2k.a2m with 355 sequences, total weight= 90.6336 avg weight= 0.255306 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30055 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ur1A/info/1ur1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1ur1A/nostruct-align/1ur1A.t2k.a2m.gz, have 92232 columns in 388 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2c4jA/nostruct-align/2c4jA.t2k.a2m.gz
# 2c4jA.t2k.a2m with 1098 sequences, total weight= 1098 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23695 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2c4jA/info/2c4jA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2c4jA/nostruct-align/2c4jA.t2k.a2m.gz, have 92449 columns in 389 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hdoA/nostruct-align/1hdoA.t2k.a2m.gz
# 1hdoA.t2k.a2m with 355 sequences, total weight= 355 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10316 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hdoA/info/1hdoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hdoA/nostruct-align/1hdoA.t2k.a2m.gz, have 92654 columns in 390 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bnmA/nostruct-align/2bnmA.t2k.a2m.gz
# 2bnmA.t2k.a2m with 196 sequences, total weight= 194.361 avg weight= 0.991638 42 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bnmA/info/2bnmA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bnmA/nostruct-align/2bnmA.t2k.a2m.gz, have 92848 columns in 391 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zxuA/nostruct-align/1zxuA.t2k.a2m.gz
# 1zxuA.t2k.a2m with 61 sequences, total weight= 61 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20929 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zxuA/info/1zxuA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zxuA/nostruct-align/1zxuA.t2k.a2m.gz, have 93010 columns in 392 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2e/2exrA/nostruct-align/2exrA.t2k.a2m.gz
# 2exrA.t2k.a2m with 1387 sequences, total weight= 1387 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.869411 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2e/2exrA/info/2exrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2e/2exrA/nostruct-align/2exrA.t2k.a2m.gz, have 93501 columns in 393 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2ffcA/nostruct-align/2ffcA.t2k.a2m.gz
# 2ffcA.t2k.a2m with 245 sequences, total weight= 115.079 avg weight= 0.469709 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3005 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2ffcA/info/2ffcA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2ffcA/nostruct-align/2ffcA.t2k.a2m.gz, have 93819 columns in 394 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rdqE/nostruct-align/1rdqE.t2k.a2m.gz
# 1rdqE.t2k.a2m with 14842 sequences, total weight= 14842 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19021 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rdqE/info/1rdqE.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rdqE/nostruct-align/1rdqE.t2k.a2m.gz, have 94161 columns in 395 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k.a2m.gz
# 1dosA.t2k.a2m with 241 sequences, total weight= 22.2998 avg weight= 0.0925302 41 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dosA/info/1dosA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k.a2m.gz, have 94519 columns in 396 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n4wA/nostruct-align/1n4wA.t2k.a2m.gz
# 1n4wA.t2k.a2m with 403 sequences, total weight= 403 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10478 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n4wA/info/1n4wA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1n4wA/nostruct-align/1n4wA.t2k.a2m.gz, have 95017 columns in 397 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iomA/nostruct-align/1iomA.t2k.a2m.gz
# 1iomA.t2k.a2m with 526 sequences, total weight= 48.2638 avg weight= 0.0917563 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iomA/info/1iomA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1iomA/nostruct-align/1iomA.t2k.a2m.gz, have 95391 columns in 398 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uixA/nostruct-align/1uixA.t2k.a2m.gz
# 1uixA.t2k.a2m with 19 sequences, total weight= 2.92915 avg weight= 0.154166 10 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uixA/info/1uixA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uixA/nostruct-align/1uixA.t2k.a2m.gz, have 95460 columns in 399 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w5rA/nostruct-align/1w5rA.t2k.a2m.gz
# 1w5rA.t2k.a2m with 158 sequences, total weight= 120.948 avg weight= 0.765495 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3003 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w5rA/info/1w5rA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w5rA/nostruct-align/1w5rA.t2k.a2m.gz, have 95733 columns in 400 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1ja9A/nostruct-align/1ja9A.t2k.a2m.gz
# 1ja9A.t2k.a2m with 2538 sequences, total weight= 2538 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22594 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1ja9A/info/1ja9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1ja9A/nostruct-align/1ja9A.t2k.a2m.gz, have 95992 columns in 401 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fxuA/nostruct-align/2fxuA.t2k.a2m.gz
# 2fxuA.t2k.a2m with 3211 sequences, total weight= 540.058 avg weight= 0.16819 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.33821 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fxuA/info/2fxuA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fxuA/nostruct-align/2fxuA.t2k.a2m.gz, have 96353 columns in 402 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ii5A/nostruct-align/1ii5A.t2k.a2m.gz
# 1ii5A.t2k.a2m with 374 sequences, total weight= 374 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27554 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ii5A/info/1ii5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1ii5A/nostruct-align/1ii5A.t2k.a2m.gz, have 96574 columns in 403 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bkf/nostruct-align/1bkf.t2k.a2m.gz
# 1bkf.t2k.a2m with 502 sequences, total weight= 55.9048 avg weight= 0.111364 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30075 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bkf/info/1bkf.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1bkf/nostruct-align/1bkf.t2k.a2m.gz, have 96681 columns in 404 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bebA/nostruct-align/1bebA.t2k.a2m.gz
# 1bebA.t2k.a2m with 279 sequences, total weight= 130.388 avg weight= 0.467339 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3025 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bebA/info/1bebA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1bebA/nostruct-align/1bebA.t2k.a2m.gz, have 96837 columns in 405 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2h1tA/nostruct-align/2h1tA.t2k.a2m.gz
# 2h1tA.t2k.a2m with 48 sequences, total weight= 19.1525 avg weight= 0.399011 30 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2h1tA/info/2h1tA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2h1tA/nostruct-align/2h1tA.t2k.a2m.gz, have 97023 columns in 406 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m22A/nostruct-align/1m22A.t2k.a2m.gz
# 1m22A.t2k.a2m with 409 sequences, total weight= 398.982 avg weight= 0.975506 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m22A/info/1m22A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m22A/nostruct-align/1m22A.t2k.a2m.gz, have 97510 columns in 407 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eq9A/nostruct-align/1eq9A.t2k.a2m.gz
# 1eq9A.t2k.a2m with 1612 sequences, total weight= 140.585 avg weight= 0.0872114 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32178 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eq9A/info/1eq9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1eq9A/nostruct-align/1eq9A.t2k.a2m.gz, have 97732 columns in 408 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2f6uA/nostruct-align/2f6uA.t2k.a2m.gz
# 2f6uA.t2k.a2m with 77 sequences, total weight= 21.5719 avg weight= 0.280154 36 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2f6uA/info/2f6uA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2f6uA/nostruct-align/2f6uA.t2k.a2m.gz, have 97963 columns in 409 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bhp/nostruct-align/1bhp.t2k.a2m.gz
# 1bhp.t2k.a2m with 86 sequences, total weight= 6.35952 avg weight= 0.0739479 28 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bhp/info/1bhp.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1bhp/nostruct-align/1bhp.t2k.a2m.gz, have 98008 columns in 410 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v2bA/nostruct-align/1v2bA.t2k.a2m.gz
# 1v2bA.t2k.a2m with 64 sequences, total weight= 20.7884 avg weight= 0.324819 36 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v2bA/info/1v2bA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v2bA/nostruct-align/1v2bA.t2k.a2m.gz, have 98156 columns in 411 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d02A/nostruct-align/1d02A.t2k.a2m.gz
# 1d02A.t2k.a2m with 5 sequences, total weight= 3.64996 avg weight= 0.729993 11 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d02A/info/1d02A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1d02A/nostruct-align/1d02A.t2k.a2m.gz, have 98353 columns in 412 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1io7A/nostruct-align/1io7A.t2k.a2m.gz
# 1io7A.t2k.a2m with 1608 sequences, total weight= 1608 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09169 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1io7A/info/1io7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1io7A/nostruct-align/1io7A.t2k.a2m.gz, have 98719 columns in 413 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tkeA/nostruct-align/1tkeA.t2k.a2m.gz
# 1tkeA.t2k.a2m with 525 sequences, total weight= 75.4985 avg weight= 0.143807 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30158 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tkeA/info/1tkeA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tkeA/nostruct-align/1tkeA.t2k.a2m.gz, have 98943 columns in 414 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g2oA/nostruct-align/1g2oA.t2k.a2m.gz
# 1g2oA.t2k.a2m with 183 sequences, total weight= 33.7354 avg weight= 0.184347 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g2oA/info/1g2oA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1g2oA/nostruct-align/1g2oA.t2k.a2m.gz, have 99205 columns in 415 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yqhA/nostruct-align/1yqhA.t2k.a2m.gz
# 1yqhA.t2k.a2m with 89 sequences, total weight= 28.1616 avg weight= 0.316423 39 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yqhA/info/1yqhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yqhA/nostruct-align/1yqhA.t2k.a2m.gz, have 99309 columns in 416 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pinA/nostruct-align/1pinA.t2k.a2m.gz
# 1pinA.t2k.a2m with 534 sequences, total weight= 104.006 avg weight= 0.194768 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30092 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pinA/info/1pinA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pinA/nostruct-align/1pinA.t2k.a2m.gz, have 99462 columns in 417 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2o1kA/nostruct-align/2o1kA.t2k.a2m.gz
# 2o1kA.t2k.a2m with 336 sequences, total weight= 3.34603 avg weight= 0.00995843 16 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2o1kA/info/2o1kA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2o1kA/nostruct-align/2o1kA.t2k.a2m.gz, have 99505 columns in 418 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2j5zA/nostruct-align/2j5zA.t2k.a2m.gz
# 2j5zA.t2k.a2m with 1068 sequences, total weight= 39.8157 avg weight= 0.0372806 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3004 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2j5zA/info/2j5zA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2j5zA/nostruct-align/2j5zA.t2k.a2m.gz, have 99719 columns in 419 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ispA/nostruct-align/1ispA.t2k.a2m.gz
# 1ispA.t2k.a2m with 339 sequences, total weight= 339 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.931774 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ispA/info/1ispA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1ispA/nostruct-align/1ispA.t2k.a2m.gz, have 99898 columns in 420 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qh5A/nostruct-align/1qh5A.t2k.a2m.gz
# 1qh5A.t2k.a2m with 572 sequences, total weight= 572 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22834 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qh5A/info/1qh5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qh5A/nostruct-align/1qh5A.t2k.a2m.gz, have 100158 columns in 421 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2h5cA/nostruct-align/2h5cA.t2k.a2m.gz
# 2h5cA.t2k.a2m with 785 sequences, total weight= 101.752 avg weight= 0.12962 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30207 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2h5cA/info/2h5cA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2h5cA/nostruct-align/2h5cA.t2k.a2m.gz, have 100356 columns in 422 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v0wA/nostruct-align/1v0wA.t2k.a2m.gz
# 1v0wA.t2k.a2m with 204 sequences, total weight= 204 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09508 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v0wA/info/1v0wA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v0wA/nostruct-align/1v0wA.t2k.a2m.gz, have 100852 columns in 423 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2ce0A/nostruct-align/2ce0A.t2k.a2m.gz
# 2ce0A.t2k.a2m with 520 sequences, total weight= 230.184 avg weight= 0.442661 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30295 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2ce0A/info/2ce0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2ce0A/nostruct-align/2ce0A.t2k.a2m.gz, have 100951 columns in 424 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pgvA/nostruct-align/1pgvA.t2k.a2m.gz
# 1pgvA.t2k.a2m with 193 sequences, total weight= 132.029 avg weight= 0.684089 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pgvA/info/1pgvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pgvA/nostruct-align/1pgvA.t2k.a2m.gz, have 101118 columns in 425 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lc5A/nostruct-align/1lc5A.t2k.a2m.gz
# 1lc5A.t2k.a2m with 920 sequences, total weight= 920 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12378 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lc5A/info/1lc5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lc5A/nostruct-align/1lc5A.t2k.a2m.gz, have 101473 columns in 426 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r5yA/nostruct-align/1r5yA.t2k.a2m.gz
# 1r5yA.t2k.a2m with 867 sequences, total weight= 49.4749 avg weight= 0.0570645 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r5yA/info/1r5yA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r5yA/nostruct-align/1r5yA.t2k.a2m.gz, have 101834 columns in 427 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1je0A/nostruct-align/1je0A.t2k.a2m.gz
# 1je0A.t2k.a2m with 253 sequences, total weight= 93.7194 avg weight= 0.370432 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30137 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1je0A/info/1je0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1je0A/nostruct-align/1je0A.t2k.a2m.gz, have 102060 columns in 428 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cl8A/nostruct-align/1cl8A.t2k.a2m.gz
# 1cl8A.t2k.a2m with 9 sequences, total weight= 3.47775 avg weight= 0.386416 11 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cl8A/info/1cl8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1cl8A/nostruct-align/1cl8A.t2k.a2m.gz, have 102321 columns in 429 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2b02A/nostruct-align/2b02A.t2k.a2m.gz
# 2b02A.t2k.a2m with 4432 sequences, total weight= 4432 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.949502 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2b02A/info/2b02A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2b02A/nostruct-align/2b02A.t2k.a2m.gz, have 102432 columns in 430 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gnyA/nostruct-align/1gnyA.t2k.a2m.gz
# 1gnyA.t2k.a2m with 6 sequences, total weight= 2.23524 avg weight= 0.37254 8 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gnyA/info/1gnyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gnyA/nostruct-align/1gnyA.t2k.a2m.gz, have 102585 columns in 431 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1ctj/nostruct-align/1ctj.t2k.a2m.gz
# 1ctj.t2k.a2m with 625 sequences, total weight= 432.812 avg weight= 0.692499 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30452 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1ctj/info/1ctj.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1ctj/nostruct-align/1ctj.t2k.a2m.gz, have 102674 columns in 432 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bfdB/nostruct-align/2bfdB.t2k.a2m.gz
# 2bfdB.t2k.a2m with 1107 sequences, total weight= 117.092 avg weight= 0.105774 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30462 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bfdB/info/2bfdB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bfdB/nostruct-align/2bfdB.t2k.a2m.gz, have 103006 columns in 433 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uvqA/nostruct-align/1uvqA.t2k.a2m.gz
# 1uvqA.t2k.a2m with 7063 sequences, total weight= 7063 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27625 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uvqA/info/1uvqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uvqA/nostruct-align/1uvqA.t2k.a2m.gz, have 103188 columns in 434 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bbaA/nostruct-align/2bbaA.t2k.a2m.gz
# 2bbaA.t2k.a2m with 433 sequences, total weight= 14.5112 avg weight= 0.0335133 35 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bbaA/info/2bbaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bbaA/nostruct-align/2bbaA.t2k.a2m.gz, have 103373 columns in 435 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qkkA/nostruct-align/1qkkA.t2k.a2m.gz
# 1qkkA.t2k.a2m with 1328 sequences, total weight= 1207.49 avg weight= 0.909253 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3022 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qkkA/info/1qkkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qkkA/nostruct-align/1qkkA.t2k.a2m.gz, have 103512 columns in 436 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m6sA/nostruct-align/1m6sA.t2k.a2m.gz
# 1m6sA.t2k.a2m with 1258 sequences, total weight= 1258 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.938771 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m6sA/info/1m6sA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m6sA/nostruct-align/1m6sA.t2k.a2m.gz, have 103855 columns in 437 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xg5A/nostruct-align/1xg5A.t2k.a2m.gz
# 1xg5A.t2k.a2m with 7704 sequences, total weight= 7704 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24617 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xg5A/info/1xg5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xg5A/nostruct-align/1xg5A.t2k.a2m.gz, have 104109 columns in 438 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vm0A/nostruct-align/1vm0A.t2k.a2m.gz
# 1vm0A.t2k.a2m with 43 sequences, total weight= 15.448 avg weight= 0.359255 24 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vm0A/info/1vm0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vm0A/nostruct-align/1vm0A.t2k.a2m.gz, have 104202 columns in 439 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1ga6A/nostruct-align/1ga6A.t2k.a2m.gz
# 1ga6A.t2k.a2m with 220 sequences, total weight= 220 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18836 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1ga6A/info/1ga6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1ga6A/nostruct-align/1ga6A.t2k.a2m.gz, have 104571 columns in 440 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2absA/nostruct-align/2absA.t2k.a2m.gz
# 2absA.t2k.a2m with 1478 sequences, total weight= 1478 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01524 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2absA/info/2absA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2absA/nostruct-align/2absA.t2k.a2m.gz, have 104911 columns in 441 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xwwA/nostruct-align/1xwwA.t2k.a2m.gz
# 1xwwA.t2k.a2m with 620 sequences, total weight= 353.772 avg weight= 0.570601 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30576 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xwwA/info/1xwwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xwwA/nostruct-align/1xwwA.t2k.a2m.gz, have 105068 columns in 442 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2aioA/nostruct-align/2aioA.t2k.a2m.gz
# 2aioA.t2k.a2m with 1950 sequences, total weight= 1950 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.900197 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2aioA/info/2aioA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2aioA/nostruct-align/2aioA.t2k.a2m.gz, have 105334 columns in 443 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2h7wA/nostruct-align/2h7wA.t2k.a2m.gz
# 2h7wA.t2k.a2m with 77 sequences, total weight= 52.7659 avg weight= 0.685272 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2h7wA/info/2h7wA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2h7wA/nostruct-align/2h7wA.t2k.a2m.gz, have 105442 columns in 444 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2ab0A/nostruct-align/2ab0A.t2k.a2m.gz
# 2ab0A.t2k.a2m with 660 sequences, total weight= 660 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27648 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2ab0A/info/2ab0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2ab0A/nostruct-align/2ab0A.t2k.a2m.gz, have 105637 columns in 445 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wpaA/nostruct-align/1wpaA.t2k.a2m.gz
# 1wpaA.t2k.a2m with 105 sequences, total weight= 16.6807 avg weight= 0.158863 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wpaA/info/1wpaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wpaA/nostruct-align/1wpaA.t2k.a2m.gz, have 105744 columns in 446 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w6sB/nostruct-align/1w6sB.t2k.a2m.gz
# 1w6sB.t2k.a2m with 15 sequences, total weight= 3.01037 avg weight= 0.200691 14 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w6sB/info/1w6sB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w6sB/nostruct-align/1w6sB.t2k.a2m.gz, have 105816 columns in 447 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2g40A/nostruct-align/2g40A.t2k.a2m.gz
# 2g40A.t2k.a2m with 299 sequences, total weight= 220.455 avg weight= 0.737307 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30218 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2g40A/info/2g40A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2g40A/nostruct-align/2g40A.t2k.a2m.gz, have 105980 columns in 448 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cohA/nostruct-align/2cohA.t2k.a2m.gz
# 2cohA.t2k.a2m with 959 sequences, total weight= 959 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17082 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cohA/info/2cohA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cohA/nostruct-align/2cohA.t2k.a2m.gz, have 106174 columns in 449 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r6jA/nostruct-align/1r6jA.t2k.a2m.gz
# 1r6jA.t2k.a2m with 685 sequences, total weight= 54.7791 avg weight= 0.0799695 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30045 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r6jA/info/1r6jA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r6jA/nostruct-align/1r6jA.t2k.a2m.gz, have 106256 columns in 450 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bmoB/nostruct-align/2bmoB.t2k.a2m.gz
# 2bmoB.t2k.a2m with 138 sequences, total weight= 53.2885 avg weight= 0.386149 44 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bmoB/info/2bmoB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bmoB/nostruct-align/2bmoB.t2k.a2m.gz, have 106450 columns in 451 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wz3A/nostruct-align/1wz3A.t2k.a2m.gz
# 1wz3A.t2k.a2m with 40 sequences, total weight= 7.36791 avg weight= 0.184198 24 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wz3A/info/1wz3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wz3A/nostruct-align/1wz3A.t2k.a2m.gz, have 106534 columns in 452 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r8mE/nostruct-align/1r8mE.t2k.a2m.gz
# 1r8mE.t2k.a2m with 326 sequences, total weight= 31.7374 avg weight= 0.097354 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r8mE/info/1r8mE.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r8mE/nostruct-align/1r8mE.t2k.a2m.gz, have 106730 columns in 453 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kfwA/nostruct-align/1kfwA.t2k.a2m.gz
# 1kfwA.t2k.a2m with 594 sequences, total weight= 294.275 avg weight= 0.495412 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30386 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kfwA/info/1kfwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kfwA/nostruct-align/1kfwA.t2k.a2m.gz, have 107165 columns in 454 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h7cA/nostruct-align/1h7cA.t2k.a2m.gz
# 1h7cA.t2k.a2m with 28 sequences, total weight= 14.6228 avg weight= 0.522243 24 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h7cA/info/1h7cA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h7cA/nostruct-align/1h7cA.t2k.a2m.gz, have 107268 columns in 455 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hfnA/nostruct-align/2hfnA.t2k.a2m.gz
# 2hfnA.t2k.a2m with 174 sequences, total weight= 110.895 avg weight= 0.637326 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hfnA/info/2hfnA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hfnA/nostruct-align/2hfnA.t2k.a2m.gz, have 107417 columns in 456 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gbwB/nostruct-align/2gbwB.t2k.a2m.gz
# 2gbwB.t2k.a2m with 239 sequences, total weight= 66.2292 avg weight= 0.27711 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30047 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gbwB/info/2gbwB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gbwB/nostruct-align/2gbwB.t2k.a2m.gz, have 107587 columns in 457 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uarA/nostruct-align/1uarA.t2k.a2m.gz
# 1uarA.t2k.a2m with 504 sequences, total weight= 504 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29604 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uarA/info/1uarA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uarA/nostruct-align/1uarA.t2k.a2m.gz, have 107863 columns in 458 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oewA/nostruct-align/1oewA.t2k.a2m.gz
# 1oewA.t2k.a2m with 616 sequences, total weight= 165.959 avg weight= 0.269414 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30881 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oewA/info/1oewA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oewA/nostruct-align/1oewA.t2k.a2m.gz, have 108191 columns in 459 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mqiA/nostruct-align/1mqiA.t2k.a2m.gz
# 1mqiA.t2k.a2m with 936 sequences, total weight= 936 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24423 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mqiA/info/1mqiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mqiA/nostruct-align/1mqiA.t2k.a2m.gz, have 108451 columns in 460 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1msoB/nostruct-align/1msoB.t2k.a2m.gz
# 1msoB.t2k.a2m with 362 sequences, total weight= 4.26439 avg weight= 0.0117801 23 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1msoB/info/1msoB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1msoB/nostruct-align/1msoB.t2k.a2m.gz, have 108481 columns in 461 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o9iA/nostruct-align/1o9iA.t2k.a2m.gz
# 1o9iA.t2k.a2m with 46 sequences, total weight= 16.689 avg weight= 0.362804 30 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o9iA/info/1o9iA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1o9iA/nostruct-align/1o9iA.t2k.a2m.gz, have 108747 columns in 462 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1ne9A/nostruct-align/1ne9A.t2k.a2m.gz
# 1ne9A.t2k.a2m with 119 sequences, total weight= 119 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20746 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1ne9A/info/1ne9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1ne9A/nostruct-align/1ne9A.t2k.a2m.gz, have 109082 columns in 463 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kqfA/nostruct-align/1kqfA.t2k.a2m.gz
# 1kqfA.t2k.a2m with 370 sequences, total weight= 370 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19867 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kqfA/info/1kqfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kqfA/nostruct-align/1kqfA.t2k.a2m.gz, have 110064 columns in 464 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2j9cA/nostruct-align/2j9cA.t2k.a2m.gz
# 2j9cA.t2k.a2m with 797 sequences, total weight= 29.1032 avg weight= 0.0365159 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2j9cA/info/2j9cA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2j9cA/nostruct-align/2j9cA.t2k.a2m.gz, have 110181 columns in 465 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3p/3proC/nostruct-align/3proC.t2k.a2m.gz
# 3proC.t2k.a2m with 32 sequences, total weight= 13.7861 avg weight= 0.430815 27 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3p/3proC/info/3proC.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/3p/3proC/nostruct-align/3proC.t2k.a2m.gz, have 110331 columns in 466 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gs8A/nostruct-align/2gs8A.t2k.a2m.gz
# 2gs8A.t2k.a2m with 170 sequences, total weight= 33.4233 avg weight= 0.196608 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gs8A/info/2gs8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gs8A/nostruct-align/2gs8A.t2k.a2m.gz, have 110647 columns in 467 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mtyB/nostruct-align/1mtyB.t2k.a2m.gz
# 1mtyB.t2k.a2m with 35 sequences, total weight= 17.2845 avg weight= 0.493843 24 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mtyB/info/1mtyB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mtyB/nostruct-align/1mtyB.t2k.a2m.gz, have 111031 columns in 468 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2i71A/nostruct-align/2i71A.t2k.a2m.gz
# 2i71A.t2k.a2m with 21 sequences, total weight= 21 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.915419 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2i71A/info/2i71A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2i71A/nostruct-align/2i71A.t2k.a2m.gz, have 111402 columns in 469 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vk8A/nostruct-align/1vk8A.t2k.a2m.gz
# 1vk8A.t2k.a2m with 61 sequences, total weight= 21.1855 avg weight= 0.347303 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vk8A/info/1vk8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vk8A/nostruct-align/1vk8A.t2k.a2m.gz, have 111495 columns in 470 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v7rA/nostruct-align/1v7rA.t2k.a2m.gz
# 1v7rA.t2k.a2m with 200 sequences, total weight= 21.5755 avg weight= 0.107877 45 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v7rA/info/1v7rA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v7rA/nostruct-align/1v7rA.t2k.a2m.gz, have 111681 columns in 471 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jyrA/nostruct-align/1jyrA.t2k.a2m.gz
# 1jyrA.t2k.a2m with 910 sequences, total weight= 89.3673 avg weight= 0.0982058 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30451 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jyrA/info/1jyrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jyrA/nostruct-align/1jyrA.t2k.a2m.gz, have 111777 columns in 472 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2d4nA/nostruct-align/2d4nA.t2k.a2m.gz
# 2d4nA.t2k.a2m with 959 sequences, total weight= 84.6425 avg weight= 0.0882612 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30105 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2d4nA/info/2d4nA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2d4nA/nostruct-align/2d4nA.t2k.a2m.gz, have 111890 columns in 473 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ujpA/nostruct-align/1ujpA.t2k.a2m.gz
# 1ujpA.t2k.a2m with 284 sequences, total weight= 25.3522 avg weight= 0.0892684 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ujpA/info/1ujpA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1ujpA/nostruct-align/1ujpA.t2k.a2m.gz, have 112133 columns in 474 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q4uA/nostruct-align/1q4uA.t2k.a2m.gz
# 1q4uA.t2k.a2m with 180 sequences, total weight= 152.881 avg weight= 0.849339 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q4uA/info/1q4uA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1q4uA/nostruct-align/1q4uA.t2k.a2m.gz, have 112273 columns in 475 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h70A/nostruct-align/1h70A.t2k.a2m.gz
# 1h70A.t2k.a2m with 91 sequences, total weight= 54.3462 avg weight= 0.597211 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h70A/info/1h70A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h70A/nostruct-align/1h70A.t2k.a2m.gz, have 112528 columns in 476 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xdzA/nostruct-align/1xdzA.t2k.a2m.gz
# 1xdzA.t2k.a2m with 284 sequences, total weight= 127.583 avg weight= 0.449237 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30078 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xdzA/info/1xdzA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xdzA/nostruct-align/1xdzA.t2k.a2m.gz, have 112766 columns in 477 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jatB/nostruct-align/1jatB.t2k.a2m.gz
# 1jatB.t2k.a2m with 336 sequences, total weight= 39.8878 avg weight= 0.118714 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3003 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jatB/info/1jatB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jatB/nostruct-align/1jatB.t2k.a2m.gz, have 112898 columns in 478 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1plc/nostruct-align/1plc.t2k.a2m.gz
# 1plc.t2k.a2m with 180 sequences, total weight= 87.0916 avg weight= 0.483842 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30046 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1plc/info/1plc.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1plc/nostruct-align/1plc.t2k.a2m.gz, have 112997 columns in 479 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j8uA/nostruct-align/1j8uA.t2k.a2m.gz
# 1j8uA.t2k.a2m with 132 sequences, total weight= 11.4336 avg weight= 0.0866185 28 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j8uA/info/1j8uA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1j8uA/nostruct-align/1j8uA.t2k.a2m.gz, have 113304 columns in 480 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2ddfA/nostruct-align/2ddfA.t2k.a2m.gz
# 2ddfA.t2k.a2m with 707 sequences, total weight= 664.744 avg weight= 0.940232 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30096 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2ddfA/info/2ddfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2ddfA/nostruct-align/2ddfA.t2k.a2m.gz, have 113557 columns in 481 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c3cA/nostruct-align/1c3cA.t2k.a2m.gz
# 1c3cA.t2k.a2m with 357 sequences, total weight= 129.337 avg weight= 0.362288 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30338 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c3cA/info/1c3cA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1c3cA/nostruct-align/1c3cA.t2k.a2m.gz, have 113981 columns in 482 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2inuA/nostruct-align/2inuA.t2k.a2m.gz
# 2inuA.t2k.a2m with 21 sequences, total weight= 11.9393 avg weight= 0.568537 19 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2inuA/info/2inuA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2inuA/nostruct-align/2inuA.t2k.a2m.gz, have 114380 columns in 483 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1odmA/nostruct-align/1odmA.t2k.a2m.gz
# 1odmA.t2k.a2m with 679 sequences, total weight= 171.852 avg weight= 0.253096 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3061 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1odmA/info/1odmA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1odmA/nostruct-align/1odmA.t2k.a2m.gz, have 114709 columns in 484 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cmcA/nostruct-align/1cmcA.t2k.a2m.gz
# 1cmcA.t2k.a2m with 18 sequences, total weight= 2.19222 avg weight= 0.12179 10 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cmcA/info/1cmcA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1cmcA/nostruct-align/1cmcA.t2k.a2m.gz, have 114813 columns in 485 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w6nA/nostruct-align/1w6nA.t2k.a2m.gz
# 1w6nA.t2k.a2m with 414 sequences, total weight= 68.5017 avg weight= 0.165463 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30193 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w6nA/info/1w6nA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w6nA/nostruct-align/1w6nA.t2k.a2m.gz, have 114947 columns in 486 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gxmA/nostruct-align/1gxmA.t2k.a2m.gz
# 1gxmA.t2k.a2m with 26 sequences, total weight= 14.2778 avg weight= 0.549145 23 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gxmA/info/1gxmA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gxmA/nostruct-align/1gxmA.t2k.a2m.gz, have 115271 columns in 487 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lfkA/nostruct-align/1lfkA.t2k.a2m.gz
# 1lfkA.t2k.a2m with 1714 sequences, total weight= 1714 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11037 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lfkA/info/1lfkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lfkA/nostruct-align/1lfkA.t2k.a2m.gz, have 115646 columns in 488 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ud9A/nostruct-align/1ud9A.t2k.a2m.gz
# 1ud9A.t2k.a2m with 168 sequences, total weight= 107.894 avg weight= 0.642226 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30106 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ud9A/info/1ud9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1ud9A/nostruct-align/1ud9A.t2k.a2m.gz, have 115888 columns in 489 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1txlA/nostruct-align/1txlA.t2k.a2m.gz
# 1txlA.t2k.a2m with 32 sequences, total weight= 5.60147 avg weight= 0.175046 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1txlA/info/1txlA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1txlA/nostruct-align/1txlA.t2k.a2m.gz, have 116076 columns in 490 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2a8nA/nostruct-align/2a8nA.t2k.a2m.gz
# 2a8nA.t2k.a2m with 1110 sequences, total weight= 228.323 avg weight= 0.205697 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31248 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2a8nA/info/2a8nA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2a8nA/nostruct-align/2a8nA.t2k.a2m.gz, have 116206 columns in 491 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qjpA/nostruct-align/1qjpA.t2k.a2m.gz
# 1qjpA.t2k.a2m with 300 sequences, total weight= 152.05 avg weight= 0.506835 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30317 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qjpA/info/1qjpA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qjpA/nostruct-align/1qjpA.t2k.a2m.gz, have 116343 columns in 492 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2iu5A/nostruct-align/2iu5A.t2k.a2m.gz
# 2iu5A.t2k.a2m with 1669 sequences, total weight= 1669 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.820369 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2iu5A/info/2iu5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2iu5A/nostruct-align/2iu5A.t2k.a2m.gz, have 116522 columns in 493 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54M/nostruct-align/1v54M.t2k.a2m.gz
# 1v54M.t2k.a2m with 33 sequences, total weight= 4.75615 avg weight= 0.144126 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54M/info/1v54M.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v54M/nostruct-align/1v54M.t2k.a2m.gz, have 116565 columns in 494 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ufyA/nostruct-align/1ufyA.t2k.a2m.gz
# 1ufyA.t2k.a2m with 28 sequences, total weight= 6.61905 avg weight= 0.236395 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ufyA/info/1ufyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1ufyA/nostruct-align/1ufyA.t2k.a2m.gz, have 116686 columns in 495 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gvkB/nostruct-align/1gvkB.t2k.a2m.gz
# 1gvkB.t2k.a2m with 2426 sequences, total weight= 1508.88 avg weight= 0.621962 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31371 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gvkB/info/1gvkB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gvkB/nostruct-align/1gvkB.t2k.a2m.gz, have 116926 columns in 496 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v7wA/nostruct-align/1v7wA.t2k.a2m.gz
# 1v7wA.t2k.a2m with 125 sequences, total weight= 125 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24638 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v7wA/info/1v7wA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v7wA/nostruct-align/1v7wA.t2k.a2m.gz, have 117705 columns in 497 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1ly2A/nostruct-align/1ly2A.t2k.a2m.gz
# 1ly2A.t2k.a2m with 1193 sequences, total weight= 1193 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16405 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1ly2A/info/1ly2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1ly2A/nostruct-align/1ly2A.t2k.a2m.gz, have 117835 columns in 498 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mk0A/nostruct-align/1mk0A.t2k.a2m.gz
# 1mk0A.t2k.a2m with 88 sequences, total weight= 83.0149 avg weight= 0.943351 44 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mk0A/info/1mk0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mk0A/nostruct-align/1mk0A.t2k.a2m.gz, have 117932 columns in 499 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2c2uA/nostruct-align/2c2uA.t2k.a2m.gz
# 2c2uA.t2k.a2m with 476 sequences, total weight= 82.0247 avg weight= 0.172321 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30031 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2c2uA/info/2c2uA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2c2uA/nostruct-align/2c2uA.t2k.a2m.gz, have 118110 columns in 500 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nnfA/nostruct-align/1nnfA.t2k.a2m.gz
# 1nnfA.t2k.a2m with 354 sequences, total weight= 354 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.979864 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nnfA/info/1nnfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nnfA/nostruct-align/1nnfA.t2k.a2m.gz, have 118418 columns in 501 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3c/3cla/nostruct-align/3cla.t2k.a2m.gz
# 3cla.t2k.a2m with 69 sequences, total weight= 15.6364 avg weight= 0.226614 32 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3c/3cla/info/3cla.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/3c/3cla/nostruct-align/3cla.t2k.a2m.gz, have 118631 columns in 502 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2ar5A/nostruct-align/2ar5A.t2k.a2m.gz
# 2ar5A.t2k.a2m with 518 sequences, total weight= 518 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25701 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2ar5A/info/2ar5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2ar5A/nostruct-align/2ar5A.t2k.a2m.gz, have 118748 columns in 503 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2aeuA/nostruct-align/2aeuA.t2k.a2m.gz
# 2aeuA.t2k.a2m with 971 sequences, total weight= 971 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04573 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2aeuA/info/2aeuA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2aeuA/nostruct-align/2aeuA.t2k.a2m.gz, have 119114 columns in 504 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2ai4A/nostruct-align/2ai4A.t2k.a2m.gz
# 2ai4A.t2k.a2m with 12 sequences, total weight= 3.05687 avg weight= 0.254739 13 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2ai4A/info/2ai4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2ai4A/nostruct-align/2ai4A.t2k.a2m.gz, have 119225 columns in 505 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2o30A/nostruct-align/2o30A.t2k.a2m.gz
# 2o30A.t2k.a2m with 166 sequences, total weight= 26.024 avg weight= 0.156771 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2o30A/info/2o30A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2o30A/nostruct-align/2o30A.t2k.a2m.gz, have 119307 columns in 506 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tp6A/nostruct-align/1tp6A.t2k.a2m.gz
# 1tp6A.t2k.a2m with 13 sequences, total weight= 6.01435 avg weight= 0.462642 19 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tp6A/info/1tp6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tp6A/nostruct-align/1tp6A.t2k.a2m.gz, have 119433 columns in 507 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tjoA/nostruct-align/1tjoA.t2k.a2m.gz
# 1tjoA.t2k.a2m with 346 sequences, total weight= 146.579 avg weight= 0.423638 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3005 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tjoA/info/1tjoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tjoA/nostruct-align/1tjoA.t2k.a2m.gz, have 119613 columns in 508 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q0pA/nostruct-align/1q0pA.t2k.a2m.gz
# 1q0pA.t2k.a2m with 839 sequences, total weight= 641.551 avg weight= 0.764662 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30532 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q0pA/info/1q0pA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1q0pA/nostruct-align/1q0pA.t2k.a2m.gz, have 119805 columns in 509 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yljA/nostruct-align/1yljA.t2k.a2m.gz
# 1yljA.t2k.a2m with 817 sequences, total weight= 156.451 avg weight= 0.191495 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30992 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yljA/info/1yljA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yljA/nostruct-align/1yljA.t2k.a2m.gz, have 120068 columns in 510 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2ohwA/nostruct-align/2ohwA.t2k.a2m.gz
# 2ohwA.t2k.a2m with 55 sequences, total weight= 21.8136 avg weight= 0.396611 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2ohwA/info/2ohwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2ohwA/nostruct-align/2ohwA.t2k.a2m.gz, have 120196 columns in 511 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gmxA/nostruct-align/1gmxA.t2k.a2m.gz
# 1gmxA.t2k.a2m with 655 sequences, total weight= 599.004 avg weight= 0.914509 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30139 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gmxA/info/1gmxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gmxA/nostruct-align/1gmxA.t2k.a2m.gz, have 120304 columns in 512 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2c71A/nostruct-align/2c71A.t2k.a2m.gz
# 2c71A.t2k.a2m with 1031 sequences, total weight= 1031 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18306 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2c71A/info/2c71A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2c71A/nostruct-align/2c71A.t2k.a2m.gz, have 120509 columns in 513 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vybA/nostruct-align/1vybA.t2k.a2m.gz
# 1vybA.t2k.a2m with 468 sequences, total weight= 468 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22209 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vybA/info/1vybA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vybA/nostruct-align/1vybA.t2k.a2m.gz, have 120745 columns in 514 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2i3fA/nostruct-align/2i3fA.t2k.a2m.gz
# 2i3fA.t2k.a2m with 136 sequences, total weight= 48.2607 avg weight= 0.354858 39 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2i3fA/info/2i3fA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2i3fA/nostruct-align/2i3fA.t2k.a2m.gz, have 120951 columns in 515 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2j6lA/nostruct-align/2j6lA.t2k.a2m.gz
# 2j6lA.t2k.a2m with 6158 sequences, total weight= 692.843 avg weight= 0.112511 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.34759 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2j6lA/info/2j6lA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2j6lA/nostruct-align/2j6lA.t2k.a2m.gz, have 121448 columns in 516 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mxgA/nostruct-align/1mxgA.t2k.a2m.gz
# 1mxgA.t2k.a2m with 1205 sequences, total weight= 1205 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12979 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mxgA/info/1mxgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mxgA/nostruct-align/1mxgA.t2k.a2m.gz, have 121883 columns in 517 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jetA/nostruct-align/1jetA.t2k.a2m.gz
# 1jetA.t2k.a2m with 474 sequences, total weight= 474 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04759 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jetA/info/1jetA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jetA/nostruct-align/1jetA.t2k.a2m.gz, have 122400 columns in 518 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gbs/nostruct-align/1gbs.t2k.a2m.gz
# 1gbs.t2k.a2m with 65 sequences, total weight= 39.2109 avg weight= 0.603244 35 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gbs/info/1gbs.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gbs/nostruct-align/1gbs.t2k.a2m.gz, have 122585 columns in 519 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gk7A/nostruct-align/1gk7A.t2k.a2m.gz
# 1gk7A.t2k.a2m with 662 sequences, total weight= 9.25488 avg weight= 0.0139802 31 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gk7A/info/1gk7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gk7A/nostruct-align/1gk7A.t2k.a2m.gz, have 122624 columns in 520 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oohA/nostruct-align/1oohA.t2k.a2m.gz
# 1oohA.t2k.a2m with 147 sequences, total weight= 147 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12403 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oohA/info/1oohA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oohA/nostruct-align/1oohA.t2k.a2m.gz, have 122750 columns in 521 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pz4A/nostruct-align/1pz4A.t2k.a2m.gz
# 1pz4A.t2k.a2m with 84 sequences, total weight= 20.4319 avg weight= 0.243236 35 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pz4A/info/1pz4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pz4A/nostruct-align/1pz4A.t2k.a2m.gz, have 122863 columns in 522 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2c6uA/nostruct-align/2c6uA.t2k.a2m.gz
# 2c6uA.t2k.a2m with 2878 sequences, total weight= 2878 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16123 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2c6uA/info/2c6uA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2c6uA/nostruct-align/2c6uA.t2k.a2m.gz, have 122985 columns in 523 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d4oA/nostruct-align/1d4oA.t2k.a2m.gz
# 1d4oA.t2k.a2m with 110 sequences, total weight= 4.1464 avg weight= 0.0376946 22 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d4oA/info/1d4oA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1d4oA/nostruct-align/1d4oA.t2k.a2m.gz, have 123162 columns in 524 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qgiA/nostruct-align/1qgiA.t2k.a2m.gz
# 1qgiA.t2k.a2m with 24 sequences, total weight= 10.9189 avg weight= 0.454954 19 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qgiA/info/1qgiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qgiA/nostruct-align/1qgiA.t2k.a2m.gz, have 123421 columns in 525 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dy5A/nostruct-align/1dy5A.t2k.a2m.gz
# 1dy5A.t2k.a2m with 329 sequences, total weight= 20.6794 avg weight= 0.0628554 42 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dy5A/info/1dy5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dy5A/nostruct-align/1dy5A.t2k.a2m.gz, have 123545 columns in 526 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gk9A/nostruct-align/1gk9A.t2k.a2m.gz
# 1gk9A.t2k.a2m with 108 sequences, total weight= 49.959 avg weight= 0.462583 45 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gk9A/info/1gk9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gk9A/nostruct-align/1gk9A.t2k.a2m.gz, have 123753 columns in 527 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q6zA/nostruct-align/1q6zA.t2k.a2m.gz
# 1q6zA.t2k.a2m with 1301 sequences, total weight= 1301 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18349 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q6zA/info/1q6zA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1q6zA/nostruct-align/1q6zA.t2k.a2m.gz, have 124277 columns in 528 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sfsA/nostruct-align/1sfsA.t2k.a2m.gz
# 1sfsA.t2k.a2m with 18 sequences, total weight= 17.7166 avg weight= 0.984254 15 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sfsA/info/1sfsA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1sfsA/nostruct-align/1sfsA.t2k.a2m.gz, have 124490 columns in 529 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oi0A/nostruct-align/1oi0A.t2k.a2m.gz
# 1oi0A.t2k.a2m with 41 sequences, total weight= 31.7072 avg weight= 0.773346 35 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oi0A/info/1oi0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oi0A/nostruct-align/1oi0A.t2k.a2m.gz, have 124598 columns in 530 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vykA/nostruct-align/1vykA.t2k.a2m.gz
# 1vykA.t2k.a2m with 45 sequences, total weight= 33.384 avg weight= 0.741867 31 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vykA/info/1vykA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vykA/nostruct-align/1vykA.t2k.a2m.gz, have 124727 columns in 531 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pyfA/nostruct-align/1pyfA.t2k.a2m.gz
# 1pyfA.t2k.a2m with 2709 sequences, total weight= 2709 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24813 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pyfA/info/1pyfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pyfA/nostruct-align/1pyfA.t2k.a2m.gz, have 125038 columns in 532 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1aba/nostruct-align/1aba.t2k.a2m.gz
# 1aba.t2k.a2m with 175 sequences, total weight= 59.9923 avg weight= 0.342813 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1aba/info/1aba.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1aba/nostruct-align/1aba.t2k.a2m.gz, have 125125 columns in 533 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2f4dA/nostruct-align/2f4dA.t2k.a2m.gz
# 2f4dA.t2k.a2m with 2251 sequences, total weight= 2251 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1073 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2f4dA/info/2f4dA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2f4dA/nostruct-align/2f4dA.t2k.a2m.gz, have 125305 columns in 534 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bjnA/nostruct-align/2bjnA.t2k.a2m.gz
# 2bjnA.t2k.a2m with 135 sequences, total weight= 50.9867 avg weight= 0.377679 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bjnA/info/2bjnA.stride-mixed.strand_sep
WARNING: skipping h, since it is lower case.
WARNING: skipping p, since it is lower case.
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bjnA/nostruct-align/2bjnA.t2k.a2m.gz, have 125446 columns in 535 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2o1qA/nostruct-align/2o1qA.t2k.a2m.gz
# 2o1qA.t2k.a2m with 121 sequences, total weight= 121 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28156 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2o1qA/info/2o1qA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2o1qA/nostruct-align/2o1qA.t2k.a2m.gz, have 125590 columns in 536 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1ql0A/nostruct-align/1ql0A.t2k.a2m.gz
# 1ql0A.t2k.a2m with 90 sequences, total weight= 88.1489 avg weight= 0.979432 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1ql0A/info/1ql0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1ql0A/nostruct-align/1ql0A.t2k.a2m.gz, have 125831 columns in 537 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gttA/nostruct-align/1gttA.t2k.a2m.gz
# 1gttA.t2k.a2m with 324 sequences, total weight= 40.0959 avg weight= 0.123753 28 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gttA/info/1gttA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gttA/nostruct-align/1gttA.t2k.a2m.gz, have 126252 columns in 538 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b67A/nostruct-align/1b67A.t2k.a2m.gz
# 1b67A.t2k.a2m with 562 sequences, total weight= 30.9877 avg weight= 0.0551382 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b67A/info/1b67A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1b67A/nostruct-align/1b67A.t2k.a2m.gz, have 126320 columns in 539 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1thx/nostruct-align/1thx.t2k.a2m.gz
# 1thx.t2k.a2m with 943 sequences, total weight= 943 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2606 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1thx/info/1thx.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1thx/nostruct-align/1thx.t2k.a2m.gz, have 126428 columns in 540 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gwuA/nostruct-align/1gwuA.t2k.a2m.gz
# 1gwuA.t2k.a2m with 910 sequences, total weight= 43.9684 avg weight= 0.0483169 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30035 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gwuA/info/1gwuA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gwuA/nostruct-align/1gwuA.t2k.a2m.gz, have 126734 columns in 541 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u5xA/nostruct-align/1u5xA.t2k.a2m.gz
# 1u5xA.t2k.a2m with 179 sequences, total weight= 22.7157 avg weight= 0.126903 41 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u5xA/info/1u5xA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1u5xA/nostruct-align/1u5xA.t2k.a2m.gz, have 126864 columns in 542 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q8fA/nostruct-align/1q8fA.t2k.a2m.gz
# 1q8fA.t2k.a2m with 217 sequences, total weight= 122.295 avg weight= 0.563572 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30154 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q8fA/info/1q8fA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1q8fA/nostruct-align/1q8fA.t2k.a2m.gz, have 127172 columns in 543 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oi6A/nostruct-align/1oi6A.t2k.a2m.gz
# 1oi6A.t2k.a2m with 283 sequences, total weight= 29.1532 avg weight= 0.103015 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oi6A/info/1oi6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oi6A/nostruct-align/1oi6A.t2k.a2m.gz, have 127374 columns in 544 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nrjA/nostruct-align/1nrjA.t2k.a2m.gz
# 1nrjA.t2k.a2m with 9 sequences, total weight= 4.29105 avg weight= 0.476783 15 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nrjA/info/1nrjA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nrjA/nostruct-align/1nrjA.t2k.a2m.gz, have 127521 columns in 545 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yn4A/nostruct-align/1yn4A.t2k.a2m.gz
# 1yn4A.t2k.a2m with 30 sequences, total weight= 6.43753 avg weight= 0.214584 22 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yn4A/info/1yn4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yn4A/nostruct-align/1yn4A.t2k.a2m.gz, have 127620 columns in 546 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qstA/nostruct-align/1qstA.t2k.a2m.gz
# 1qstA.t2k.a2m with 349 sequences, total weight= 349 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02912 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qstA/info/1qstA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qstA/nostruct-align/1qstA.t2k.a2m.gz, have 127780 columns in 547 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oq1A/nostruct-align/1oq1A.t2k.a2m.gz
# 1oq1A.t2k.a2m with 6 sequences, total weight= 2.44197 avg weight= 0.406996 10 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oq1A/info/1oq1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oq1A/nostruct-align/1oq1A.t2k.a2m.gz, have 128003 columns in 548 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2h8oA/nostruct-align/2h8oA.t2k.a2m.gz
# 2h8oA.t2k.a2m with 1390 sequences, total weight= 121.792 avg weight= 0.0876201 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30375 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2h8oA/info/2h8oA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2h8oA/nostruct-align/2h8oA.t2k.a2m.gz, have 128286 columns in 549 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k5nB/nostruct-align/1k5nB.t2k.a2m.gz
# 1k5nB.t2k.a2m with 5167 sequences, total weight= 873.937 avg weight= 0.169138 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.34811 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k5nB/info/1k5nB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1k5nB/nostruct-align/1k5nB.t2k.a2m.gz, have 128386 columns in 550 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2f9sA/nostruct-align/2f9sA.t2k.a2m.gz
# 2f9sA.t2k.a2m with 4360 sequences, total weight= 4360 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12634 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2f9sA/info/2f9sA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2f9sA/nostruct-align/2f9sA.t2k.a2m.gz, have 128524 columns in 551 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2d37A/nostruct-align/2d37A.t2k.a2m.gz
# 2d37A.t2k.a2m with 584 sequences, total weight= 170.587 avg weight= 0.292102 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30413 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2d37A/info/2d37A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2d37A/nostruct-align/2d37A.t2k.a2m.gz, have 128679 columns in 552 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bio/nostruct-align/1bio.t2k.a2m.gz
# 1bio.t2k.a2m with 1598 sequences, total weight= 192.994 avg weight= 0.120772 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32534 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bio/info/1bio.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1bio/nostruct-align/1bio.t2k.a2m.gz, have 128907 columns in 553 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2g5xA/nostruct-align/2g5xA.t2k.a2m.gz
# 2g5xA.t2k.a2m with 306 sequences, total weight= 85.8161 avg weight= 0.280445 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30103 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2g5xA/info/2g5xA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2g5xA/nostruct-align/2g5xA.t2k.a2m.gz, have 129141 columns in 554 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nq7A/nostruct-align/1nq7A.t2k.a2m.gz
# 1nq7A.t2k.a2m with 1062 sequences, total weight= 1062 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28587 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nq7A/info/1nq7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nq7A/nostruct-align/1nq7A.t2k.a2m.gz, have 129385 columns in 555 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1is3A/nostruct-align/1is3A.t2k.a2m.gz
# 1is3A.t2k.a2m with 341 sequences, total weight= 59.4532 avg weight= 0.17435 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30076 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1is3A/info/1is3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1is3A/nostruct-align/1is3A.t2k.a2m.gz, have 129519 columns in 556 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2a9sA/nostruct-align/2a9sA.t2k.a2m.gz
# 2a9sA.t2k.a2m with 266 sequences, total weight= 35.7903 avg weight= 0.13455 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2a9sA/info/2a9sA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2a9sA/nostruct-align/2a9sA.t2k.a2m.gz, have 129686 columns in 557 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nkr/nostruct-align/1nkr.t2k.a2m.gz
# 1nkr.t2k.a2m with 840 sequences, total weight= 840 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26487 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nkr/info/1nkr.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nkr/nostruct-align/1nkr.t2k.a2m.gz, have 129881 columns in 558 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2izxA/nostruct-align/2izxA.t2k.a2m.gz
# 2izxA.t2k.a2m with 60 sequences, total weight= 3.78169 avg weight= 0.0630282 20 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2izxA/info/2izxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2izxA/nostruct-align/2izxA.t2k.a2m.gz, have 129920 columns in 559 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2e/2etjA/nostruct-align/2etjA.t2k.a2m.gz
# 2etjA.t2k.a2m with 483 sequences, total weight= 125.474 avg weight= 0.25978 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30114 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2e/2etjA/info/2etjA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2e/2etjA/nostruct-align/2etjA.t2k.a2m.gz, have 130131 columns in 560 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zedA/nostruct-align/1zedA.t2k.a2m.gz
# 1zedA.t2k.a2m with 395 sequences, total weight= 99.9218 avg weight= 0.252967 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30222 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zedA/info/1zedA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zedA/nostruct-align/1zedA.t2k.a2m.gz, have 130612 columns in 561 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vd6A/nostruct-align/1vd6A.t2k.a2m.gz
# 1vd6A.t2k.a2m with 595 sequences, total weight= 595 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23525 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vd6A/info/1vd6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vd6A/nostruct-align/1vd6A.t2k.a2m.gz, have 130830 columns in 562 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2a10A/nostruct-align/2a10A.t2k.a2m.gz
# 2a10A.t2k.a2m with 202 sequences, total weight= 26.9619 avg weight= 0.133475 43 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2a10A/info/2a10A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2a10A/nostruct-align/2a10A.t2k.a2m.gz, have 130934 columns in 563 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ow4A/nostruct-align/1ow4A.t2k.a2m.gz
# 1ow4A.t2k.a2m with 92 sequences, total weight= 92 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22906 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ow4A/info/1ow4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1ow4A/nostruct-align/1ow4A.t2k.a2m.gz, have 131054 columns in 564 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2f91B/nostruct-align/2f91B.t2k.a2m.gz
# 2f91B.t2k.a2m with 24 sequences, total weight= 3.02477 avg weight= 0.126032 20 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2f91B/info/2f91B.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2f91B/nostruct-align/2f91B.t2k.a2m.gz, have 131087 columns in 565 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gmiA/nostruct-align/1gmiA.t2k.a2m.gz
# 1gmiA.t2k.a2m with 359 sequences, total weight= 359 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24678 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gmiA/info/1gmiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gmiA/nostruct-align/1gmiA.t2k.a2m.gz, have 131222 columns in 566 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2czlA/nostruct-align/2czlA.t2k.a2m.gz
# 2czlA.t2k.a2m with 95 sequences, total weight= 95 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22798 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2czlA/info/2czlA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2czlA/nostruct-align/2czlA.t2k.a2m.gz, have 131492 columns in 567 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2a26A/nostruct-align/2a26A.t2k.a2m.gz
# 2a26A.t2k.a2m with 15 sequences, total weight= 3.02593 avg weight= 0.201729 10 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2a26A/info/2a26A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2a26A/nostruct-align/2a26A.t2k.a2m.gz, have 131540 columns in 568 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n57A/nostruct-align/1n57A.t2k.a2m.gz
# 1n57A.t2k.a2m with 106 sequences, total weight= 48.0213 avg weight= 0.453031 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n57A/info/1n57A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1n57A/nostruct-align/1n57A.t2k.a2m.gz, have 131819 columns in 569 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fygA/nostruct-align/2fygA.t2k.a2m.gz
# 2fygA.t2k.a2m with 168 sequences, total weight= 2.9503 avg weight= 0.0175613 19 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fygA/info/2fygA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fygA/nostruct-align/2fygA.t2k.a2m.gz, have 131947 columns in 570 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cwlA/nostruct-align/2cwlA.t2k.a2m.gz
# 2cwlA.t2k.a2m with 100 sequences, total weight= 26.5817 avg weight= 0.265817 38 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cwlA/info/2cwlA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cwlA/nostruct-align/2cwlA.t2k.a2m.gz, have 132246 columns in 571 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nykA/nostruct-align/1nykA.t2k.a2m.gz
# 1nykA.t2k.a2m with 387 sequences, total weight= 319.781 avg weight= 0.826308 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30077 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nykA/info/1nykA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nykA/nostruct-align/1nykA.t2k.a2m.gz, have 132402 columns in 572 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2b3gB/nostruct-align/2b3gB.t2k.a2m.gz
# 2b3gB.t2k.a2m with 30 sequences, total weight= 1.92966 avg weight= 0.0643221 10 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2b3gB/info/2b3gB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2b3gB/nostruct-align/2b3gB.t2k.a2m.gz, have 132426 columns in 573 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w0nA/nostruct-align/1w0nA.t2k.a2m.gz
# 1w0nA.t2k.a2m with 11 sequences, total weight= 3.43976 avg weight= 0.312705 15 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w0nA/info/1w0nA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w0nA/nostruct-align/1w0nA.t2k.a2m.gz, have 132546 columns in 574 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u7lA/nostruct-align/1u7lA.t2k.a2m.gz
# 1u7lA.t2k.a2m with 76 sequences, total weight= 18.2478 avg weight= 0.240103 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u7lA/info/1u7lA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1u7lA/nostruct-align/1u7lA.t2k.a2m.gz, have 132910 columns in 575 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t4bA/nostruct-align/1t4bA.t2k.a2m.gz
# 1t4bA.t2k.a2m with 311 sequences, total weight= 26.7956 avg weight= 0.0861595 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t4bA/info/1t4bA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1t4bA/nostruct-align/1t4bA.t2k.a2m.gz, have 133277 columns in 576 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mj5A/nostruct-align/1mj5A.t2k.a2m.gz
# 1mj5A.t2k.a2m with 986 sequences, total weight= 986 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.957944 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mj5A/info/1mj5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mj5A/nostruct-align/1mj5A.t2k.a2m.gz, have 133574 columns in 577 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fsgA/nostruct-align/1fsgA.t2k.a2m.gz
# 1fsgA.t2k.a2m with 424 sequences, total weight= 159.115 avg weight= 0.375271 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fsgA/info/1fsgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fsgA/nostruct-align/1fsgA.t2k.a2m.gz, have 133807 columns in 578 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uuqA/nostruct-align/1uuqA.t2k.a2m.gz
# 1uuqA.t2k.a2m with 82 sequences, total weight= 82 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28656 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uuqA/info/1uuqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uuqA/nostruct-align/1uuqA.t2k.a2m.gz, have 134217 columns in 579 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1od6A/nostruct-align/1od6A.t2k.a2m.gz
# 1od6A.t2k.a2m with 223 sequences, total weight= 223 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19861 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1od6A/info/1od6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1od6A/nostruct-align/1od6A.t2k.a2m.gz, have 134372 columns in 580 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2icgA/nostruct-align/2icgA.t2k.a2m.gz
# 2icgA.t2k.a2m with 22 sequences, total weight= 22 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14143 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2icgA/info/2icgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2icgA/nostruct-align/2icgA.t2k.a2m.gz, have 134531 columns in 581 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j31A/nostruct-align/1j31A.t2k.a2m.gz
# 1j31A.t2k.a2m with 768 sequences, total weight= 768 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23982 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j31A/info/1j31A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1j31A/nostruct-align/1j31A.t2k.a2m.gz, have 134793 columns in 582 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r6dA/nostruct-align/1r6dA.t2k.a2m.gz
# 1r6dA.t2k.a2m with 2852 sequences, total weight= 2852 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05051 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r6dA/info/1r6dA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r6dA/nostruct-align/1r6dA.t2k.a2m.gz, have 135115 columns in 583 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gu2A/nostruct-align/2gu2A.t2k.a2m.gz
# 2gu2A.t2k.a2m with 178 sequences, total weight= 178 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2147 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gu2A/info/2gu2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gu2A/nostruct-align/2gu2A.t2k.a2m.gz, have 135422 columns in 584 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gegA/nostruct-align/1gegA.t2k.a2m.gz
# 1gegA.t2k.a2m with 2213 sequences, total weight= 2213 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21807 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gegA/info/1gegA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gegA/nostruct-align/1gegA.t2k.a2m.gz, have 135677 columns in 585 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2s/2sak/nostruct-align/2sak.t2k.a2m.gz
# 2sak.t2k.a2m with 18 sequences, total weight= 4.65457 avg weight= 0.258587 15 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2s/2sak/info/2sak.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2s/2sak/nostruct-align/2sak.t2k.a2m.gz, have 135798 columns in 586 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xd3A/nostruct-align/1xd3A.t2k.a2m.gz
# 1xd3A.t2k.a2m with 156 sequences, total weight= 25.2577 avg weight= 0.161908 45 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xd3A/info/1xd3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xd3A/nostruct-align/1xd3A.t2k.a2m.gz, have 136027 columns in 587 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xg4A/nostruct-align/1xg4A.t2k.a2m.gz
# 1xg4A.t2k.a2m with 426 sequences, total weight= 86.0814 avg weight= 0.202069 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30149 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xg4A/info/1xg4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xg4A/nostruct-align/1xg4A.t2k.a2m.gz, have 136314 columns in 588 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1npyA/nostruct-align/1npyA.t2k.a2m.gz
# 1npyA.t2k.a2m with 341 sequences, total weight= 71.7996 avg weight= 0.210556 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30069 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1npyA/info/1npyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1npyA/nostruct-align/1npyA.t2k.a2m.gz, have 136583 columns in 589 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y7bA/nostruct-align/1y7bA.t2k.a2m.gz
# 1y7bA.t2k.a2m with 209 sequences, total weight= 209 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10147 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y7bA/info/1y7bA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1y7bA/nostruct-align/1y7bA.t2k.a2m.gz, have 137117 columns in 590 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cnqA/nostruct-align/2cnqA.t2k.a2m.gz
# 2cnqA.t2k.a2m with 579 sequences, total weight= 52.5993 avg weight= 0.0908451 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30046 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cnqA/info/2cnqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cnqA/nostruct-align/2cnqA.t2k.a2m.gz, have 137418 columns in 591 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2a7bA/nostruct-align/2a7bA.t2k.a2m.gz
# 2a7bA.t2k.a2m with 147 sequences, total weight= 30.7162 avg weight= 0.208954 43 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2a7bA/info/2a7bA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2a7bA/nostruct-align/2a7bA.t2k.a2m.gz, have 137538 columns in 592 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s3cA/nostruct-align/1s3cA.t2k.a2m.gz
# 1s3cA.t2k.a2m with 254 sequences, total weight= 36.8821 avg weight= 0.145205 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s3cA/info/1s3cA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1s3cA/nostruct-align/1s3cA.t2k.a2m.gz, have 137676 columns in 593 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mwpA/nostruct-align/1mwpA.t2k.a2m.gz
# 1mwpA.t2k.a2m with 66 sequences, total weight= 4.25233 avg weight= 0.0644292 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mwpA/info/1mwpA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mwpA/nostruct-align/1mwpA.t2k.a2m.gz, have 137772 columns in 594 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c7kA/nostruct-align/1c7kA.t2k.a2m.gz
# 1c7kA.t2k.a2m with 15 sequences, total weight= 3.93062 avg weight= 0.262042 16 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c7kA/info/1c7kA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1c7kA/nostruct-align/1c7kA.t2k.a2m.gz, have 137904 columns in 595 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t92A/nostruct-align/1t92A.t2k.a2m.gz
# 1t92A.t2k.a2m with 90 sequences, total weight= 10.7219 avg weight= 0.119132 32 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t92A/info/1t92A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1t92A/nostruct-align/1t92A.t2k.a2m.gz, have 138012 columns in 596 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kicA/nostruct-align/1kicA.t2k.a2m.gz
# 1kicA.t2k.a2m with 149 sequences, total weight= 98.6266 avg weight= 0.661924 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kicA/info/1kicA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kicA/nostruct-align/1kicA.t2k.a2m.gz, have 138329 columns in 597 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gz1A/nostruct-align/2gz1A.t2k.a2m.gz
# 2gz1A.t2k.a2m with 1049 sequences, total weight= 248.948 avg weight= 0.23732 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30939 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gz1A/info/2gz1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gz1A/nostruct-align/2gz1A.t2k.a2m.gz, have 138686 columns in 598 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zi8A/nostruct-align/1zi8A.t2k.a2m.gz
# 1zi8A.t2k.a2m with 643 sequences, total weight= 643 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.931502 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zi8A/info/1zi8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zi8A/nostruct-align/1zi8A.t2k.a2m.gz, have 138919 columns in 599 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2iw1A/nostruct-align/2iw1A.t2k.a2m.gz
# 2iw1A.t2k.a2m with 4203 sequences, total weight= 4203 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.860732 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2iw1A/info/2iw1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2iw1A/nostruct-align/2iw1A.t2k.a2m.gz, have 139289 columns in 600 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2dxqA/nostruct-align/2dxqA.t2k.a2m.gz
# 2dxqA.t2k.a2m with 262 sequences, total weight= 262 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0981 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2dxqA/info/2dxqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2dxqA/nostruct-align/2dxqA.t2k.a2m.gz, have 139436 columns in 601 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hbtA/nostruct-align/2hbtA.t2k.a2m.gz
# 2hbtA.t2k.a2m with 260 sequences, total weight= 121.383 avg weight= 0.466857 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30032 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hbtA/info/2hbtA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hbtA/nostruct-align/2hbtA.t2k.a2m.gz, have 139660 columns in 602 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p1xA/nostruct-align/1p1xA.t2k.a2m.gz
# 1p1xA.t2k.a2m with 177 sequences, total weight= 22.446 avg weight= 0.126814 42 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p1xA/info/1p1xA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1p1xA/nostruct-align/1p1xA.t2k.a2m.gz, have 139910 columns in 603 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jndA/nostruct-align/1jndA.t2k.a2m.gz
# 1jndA.t2k.a2m with 464 sequences, total weight= 426.132 avg weight= 0.918388 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30095 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jndA/info/1jndA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jndA/nostruct-align/1jndA.t2k.a2m.gz, have 140310 columns in 604 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mj4A/nostruct-align/1mj4A.t2k.a2m.gz
# 1mj4A.t2k.a2m with 357 sequences, total weight= 38.286 avg weight= 0.107244 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mj4A/info/1mj4A.stride-mixed.strand_sep
WARNING: skipping h, since it is lower case.
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mj4A/nostruct-align/1mj4A.t2k.a2m.gz, have 140389 columns in 605 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rwhA/nostruct-align/1rwhA.t2k.a2m.gz
# 1rwhA.t2k.a2m with 66 sequences, total weight= 31.9575 avg weight= 0.484205 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rwhA/info/1rwhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rwhA/nostruct-align/1rwhA.t2k.a2m.gz, have 141143 columns in 606 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j7xA/nostruct-align/1j7xA.t2k.a2m.gz
# 1j7xA.t2k.a2m with 376 sequences, total weight= 48.3809 avg weight= 0.128673 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j7xA/info/1j7xA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1j7xA/nostruct-align/1j7xA.t2k.a2m.gz, have 141445 columns in 607 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ydiB/nostruct-align/1ydiB.t2k.a2m.gz
# 1ydiB.t2k.a2m with 93 sequences, total weight= 2.23809 avg weight= 0.0240655 11 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ydiB/info/1ydiB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1ydiB/nostruct-align/1ydiB.t2k.a2m.gz, have 141469 columns in 608 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2aliA/nostruct-align/2aliA.t2k.a2m.gz
# 2aliA.t2k.a2m with 483 sequences, total weight= 483 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13998 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2aliA/info/2aliA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2aliA/nostruct-align/2aliA.t2k.a2m.gz, have 141599 columns in 609 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fqtA/nostruct-align/1fqtA.t2k.a2m.gz
# 1fqtA.t2k.a2m with 356 sequences, total weight= 277.154 avg weight= 0.778524 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30194 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fqtA/info/1fqtA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fqtA/nostruct-align/1fqtA.t2k.a2m.gz, have 141708 columns in 610 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2i49A/nostruct-align/2i49A.t2k.a2m.gz
# 2i49A.t2k.a2m with 605 sequences, total weight= 605 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2002 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2i49A/info/2i49A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2i49A/nostruct-align/2i49A.t2k.a2m.gz, have 142106 columns in 611 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r9lA/nostruct-align/1r9lA.t2k.a2m.gz
# 1r9lA.t2k.a2m with 156 sequences, total weight= 60.7151 avg weight= 0.389199 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r9lA/info/1r9lA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r9lA/nostruct-align/1r9lA.t2k.a2m.gz, have 142415 columns in 612 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2ic6A/nostruct-align/2ic6A.t2k.a2m.gz
# 2ic6A.t2k.a2m with 222 sequences, total weight= 3.56574 avg weight= 0.0160619 18 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2ic6A/info/2ic6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2ic6A/nostruct-align/2ic6A.t2k.a2m.gz, have 142486 columns in 613 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r2qA/nostruct-align/1r2qA.t2k.a2m.gz
# 1r2qA.t2k.a2m with 2951 sequences, total weight= 2873.43 avg weight= 0.973716 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30079 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r2qA/info/1r2qA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r2qA/nostruct-align/1r2qA.t2k.a2m.gz, have 142656 columns in 614 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1exrA/nostruct-align/1exrA.t2k.a2m.gz
# 1exrA.t2k.a2m with 1521 sequences, total weight= 1521 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20613 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1exrA/info/1exrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1exrA/nostruct-align/1exrA.t2k.a2m.gz, have 142802 columns in 615 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2ciaA/nostruct-align/2ciaA.t2k.a2m.gz
# 2ciaA.t2k.a2m with 1844 sequences, total weight= 83.9916 avg weight= 0.0455486 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30904 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2ciaA/info/2ciaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2ciaA/nostruct-align/2ciaA.t2k.a2m.gz, have 142900 columns in 616 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cfeA/nostruct-align/2cfeA.t2k.a2m.gz
# 2cfeA.t2k.a2m with 1965 sequences, total weight= 73.3459 avg weight= 0.0373262 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30165 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cfeA/info/2cfeA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cfeA/nostruct-align/2cfeA.t2k.a2m.gz, have 143062 columns in 617 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h5qA/nostruct-align/1h5qA.t2k.a2m.gz
# 1h5qA.t2k.a2m with 2181 sequences, total weight= 2181 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20953 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h5qA/info/1h5qA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h5qA/nostruct-align/1h5qA.t2k.a2m.gz, have 143322 columns in 618 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1htwA/nostruct-align/1htwA.t2k.a2m.gz
# 1htwA.t2k.a2m with 139 sequences, total weight= 38.3048 avg weight= 0.275574 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1htwA/info/1htwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1htwA/nostruct-align/1htwA.t2k.a2m.gz, have 143480 columns in 619 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nw8A/nostruct-align/2nw8A.t2k.a2m.gz
# 2nw8A.t2k.a2m with 203 sequences, total weight= 47.1703 avg weight= 0.232366 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nw8A/info/2nw8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2n/2nw8A/nostruct-align/2nw8A.t2k.a2m.gz, have 143746 columns in 620 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2d5bA/nostruct-align/2d5bA.t2k.a2m.gz
# 2d5bA.t2k.a2m with 3879 sequences, total weight= 3879 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20218 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2d5bA/info/2d5bA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2d5bA/nostruct-align/2d5bA.t2k.a2m.gz, have 144246 columns in 621 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tyv/nostruct-align/1tyv.t2k.a2m.gz
# 1tyv.t2k.a2m with 16 sequences, total weight= 2.30612 avg weight= 0.144133 11 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tyv/info/1tyv.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tyv/nostruct-align/1tyv.t2k.a2m.gz, have 144788 columns in 622 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54H/nostruct-align/1v54H.t2k.a2m.gz
# 1v54H.t2k.a2m with 50 sequences, total weight= 10.7083 avg weight= 0.214167 28 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54H/info/1v54H.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v54H/nostruct-align/1v54H.t2k.a2m.gz, have 144867 columns in 623 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2e/2ex2A/nostruct-align/2ex2A.t2k.a2m.gz
# 2ex2A.t2k.a2m with 302 sequences, total weight= 302 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23413 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2e/2ex2A/info/2ex2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2e/2ex2A/nostruct-align/2ex2A.t2k.a2m.gz, have 145323 columns in 624 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2d68A/nostruct-align/2d68A.t2k.a2m.gz
# 2d68A.t2k.a2m with 33 sequences, total weight= 8.38961 avg weight= 0.254231 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2d68A/info/2d68A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2d68A/nostruct-align/2d68A.t2k.a2m.gz, have 145398 columns in 625 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1chd/nostruct-align/1chd.t2k.a2m.gz
# 1chd.t2k.a2m with 193 sequences, total weight= 27.2075 avg weight= 0.140972 45 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1chd/info/1chd.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1chd/nostruct-align/1chd.t2k.a2m.gz, have 145596 columns in 626 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a3c/nostruct-align/1a3c.t2k.a2m.gz
# 1a3c.t2k.a2m with 345 sequences, total weight= 345 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29775 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a3c/info/1a3c.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1a3c/nostruct-align/1a3c.t2k.a2m.gz, have 145762 columns in 627 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hrnA/nostruct-align/1hrnA.t2k.a2m.gz
# 1hrnA.t2k.a2m with 485 sequences, total weight= 100.351 avg weight= 0.20691 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30442 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hrnA/info/1hrnA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hrnA/nostruct-align/1hrnA.t2k.a2m.gz, have 146096 columns in 628 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x3kA/nostruct-align/1x3kA.t2k.a2m.gz
# 1x3kA.t2k.a2m with 514 sequences, total weight= 164.243 avg weight= 0.319538 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30704 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x3kA/info/1x3kA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1x3kA/nostruct-align/1x3kA.t2k.a2m.gz, have 146248 columns in 629 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bx4A/nostruct-align/1bx4A.t2k.a2m.gz
# 1bx4A.t2k.a2m with 331 sequences, total weight= 331 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1442 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bx4A/info/1bx4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1bx4A/nostruct-align/1bx4A.t2k.a2m.gz, have 146590 columns in 630 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2burB/nostruct-align/2burB.t2k.a2m.gz
# 2burB.t2k.a2m with 708 sequences, total weight= 190.54 avg weight= 0.269124 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3044 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2burB/info/2burB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2burB/nostruct-align/2burB.t2k.a2m.gz, have 146828 columns in 631 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fq3A/nostruct-align/2fq3A.t2k.a2m.gz
# 2fq3A.t2k.a2m with 151 sequences, total weight= 12.7623 avg weight= 0.0845184 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fq3A/info/2fq3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fq3A/nostruct-align/2fq3A.t2k.a2m.gz, have 146913 columns in 632 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2avdA/nostruct-align/2avdA.t2k.a2m.gz
# 2avdA.t2k.a2m with 453 sequences, total weight= 453 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26816 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2avdA/info/2avdA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2avdA/nostruct-align/2avdA.t2k.a2m.gz, have 147132 columns in 633 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1opd/nostruct-align/1opd.t2k.a2m.gz
# 1opd.t2k.a2m with 232 sequences, total weight= 20.924 avg weight= 0.0901896 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1opd/info/1opd.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1opd/nostruct-align/1opd.t2k.a2m.gz, have 147217 columns in 634 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vl7A/nostruct-align/1vl7A.t2k.a2m.gz
# 1vl7A.t2k.a2m with 61 sequences, total weight= 25.6135 avg weight= 0.419893 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vl7A/info/1vl7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vl7A/nostruct-align/1vl7A.t2k.a2m.gz, have 147352 columns in 635 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m45A/nostruct-align/1m45A.t2k.a2m.gz
# 1m45A.t2k.a2m with 1647 sequences, total weight= 1647 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2819 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m45A/info/1m45A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m45A/nostruct-align/1m45A.t2k.a2m.gz, have 147494 columns in 636 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zkiA/nostruct-align/1zkiA.t2k.a2m.gz
# 1zkiA.t2k.a2m with 790 sequences, total weight= 790 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1786 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zkiA/info/1zkiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zkiA/nostruct-align/1zkiA.t2k.a2m.gz, have 147620 columns in 637 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mqoA/nostruct-align/1mqoA.t2k.a2m.gz
# 1mqoA.t2k.a2m with 743 sequences, total weight= 743 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05639 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mqoA/info/1mqoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mqoA/nostruct-align/1mqoA.t2k.a2m.gz, have 147841 columns in 638 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2d5wA/nostruct-align/2d5wA.t2k.a2m.gz
# 2d5wA.t2k.a2m with 2492 sequences, total weight= 2492 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07111 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2d5wA/info/2d5wA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2d5wA/nostruct-align/2d5wA.t2k.a2m.gz, have 148443 columns in 639 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k5nA/nostruct-align/1k5nA.t2k.a2m.gz
# 1k5nA.t2k.a2m with 8422 sequences, total weight= 5100.05 avg weight= 0.605563 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31581 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k5nA/info/1k5nA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1k5nA/nostruct-align/1k5nA.t2k.a2m.gz, have 148719 columns in 640 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2idqA/nostruct-align/2idqA.t2k.a2m.gz
# 2idqA.t2k.a2m with 360 sequences, total weight= 220.14 avg weight= 0.6115 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30179 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2idqA/info/2idqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2idqA/nostruct-align/2idqA.t2k.a2m.gz, have 148824 columns in 641 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2jgbA/nostruct-align/2jgbA.t2k.a2m.gz
# 2jgbA.t2k.a2m with 404 sequences, total weight= 120.211 avg weight= 0.297553 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30073 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2jgbA/info/2jgbA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2jgbA/nostruct-align/2jgbA.t2k.a2m.gz, have 149011 columns in 642 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nxuA/nostruct-align/1nxuA.t2k.a2m.gz
# 1nxuA.t2k.a2m with 71 sequences, total weight= 21.2282 avg weight= 0.298989 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nxuA/info/1nxuA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nxuA/nostruct-align/1nxuA.t2k.a2m.gz, have 149343 columns in 643 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lf7A/nostruct-align/1lf7A.t2k.a2m.gz
# 1lf7A.t2k.a2m with 211 sequences, total weight= 74.3457 avg weight= 0.352349 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lf7A/info/1lf7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lf7A/nostruct-align/1lf7A.t2k.a2m.gz, have 149507 columns in 644 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ew0A/nostruct-align/1ew0A.t2k.a2m.gz
# 1ew0A.t2k.a2m with 410 sequences, total weight= 410 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.989868 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ew0A/info/1ew0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1ew0A/nostruct-align/1ew0A.t2k.a2m.gz, have 149637 columns in 645 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2dri/nostruct-align/2dri.t2k.a2m.gz
# 2dri.t2k.a2m with 637 sequences, total weight= 637 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04364 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2dri/info/2dri.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2dri/nostruct-align/2dri.t2k.a2m.gz, have 149908 columns in 646 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t3qB/nostruct-align/1t3qB.t2k.a2m.gz
# 1t3qB.t2k.a2m with 828 sequences, total weight= 306.925 avg weight= 0.370682 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30945 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t3qB/info/1t3qB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1t3qB/nostruct-align/1t3qB.t2k.a2m.gz, have 150694 columns in 647 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ym3A/nostruct-align/1ym3A.t2k.a2m.gz
# 1ym3A.t2k.a2m with 394 sequences, total weight= 91.733 avg weight= 0.232825 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30414 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ym3A/info/1ym3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1ym3A/nostruct-align/1ym3A.t2k.a2m.gz, have 150887 columns in 648 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rttA/nostruct-align/1rttA.t2k.a2m.gz
# 1rttA.t2k.a2m with 450 sequences, total weight= 450 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1619 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rttA/info/1rttA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rttA/nostruct-align/1rttA.t2k.a2m.gz, have 151061 columns in 649 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2i2qA/nostruct-align/2i2qA.t2k.a2m.gz
# 2i2qA.t2k.a2m with 399 sequences, total weight= 108.417 avg weight= 0.271721 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30278 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2i2qA/info/2i2qA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2i2qA/nostruct-align/2i2qA.t2k.a2m.gz, have 151183 columns in 650 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tovA/nostruct-align/1tovA.t2k.a2m.gz
# 1tovA.t2k.a2m with 272 sequences, total weight= 34.2512 avg weight= 0.125923 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tovA/info/1tovA.stride-mixed.strand_sep
WARNING: skipping f, since it is lower case.
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tovA/nostruct-align/1tovA.t2k.a2m.gz, have 151280 columns in 651 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dqeA/nostruct-align/1dqeA.t2k.a2m.gz
# 1dqeA.t2k.a2m with 123 sequences, total weight= 30.0871 avg weight= 0.24461 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dqeA/info/1dqeA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dqeA/nostruct-align/1dqeA.t2k.a2m.gz, have 151417 columns in 652 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s7iA/nostruct-align/1s7iA.t2k.a2m.gz
# 1s7iA.t2k.a2m with 72 sequences, total weight= 27.6573 avg weight= 0.384129 41 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s7iA/info/1s7iA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1s7iA/nostruct-align/1s7iA.t2k.a2m.gz, have 151541 columns in 653 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dypA/nostruct-align/1dypA.t2k.a2m.gz
# 1dypA.t2k.a2m with 243 sequences, total weight= 243 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2104 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dypA/info/1dypA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dypA/nostruct-align/1dypA.t2k.a2m.gz, have 151812 columns in 654 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2a84A/nostruct-align/2a84A.t2k.a2m.gz
# 2a84A.t2k.a2m with 388 sequences, total weight= 18.2079 avg weight= 0.0469275 44 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2a84A/info/2a84A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2a84A/nostruct-align/2a84A.t2k.a2m.gz, have 152089 columns in 655 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y0kA/nostruct-align/1y0kA.t2k.a2m.gz
# 1y0kA.t2k.a2m with 16 sequences, total weight= 2.12796 avg weight= 0.132998 10 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y0kA/info/1y0kA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1y0kA/nostruct-align/1y0kA.t2k.a2m.gz, have 152269 columns in 656 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2od5A/nostruct-align/2od5A.t2k.a2m.gz
# 2od5A.t2k.a2m with 2 sequences, total weight= 1.82611 avg weight= 0.913054 7 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2od5A/info/2od5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2od5A/nostruct-align/2od5A.t2k.a2m.gz, have 152360 columns in 657 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zuuA/nostruct-align/1zuuA.t2k.a2m.gz
# 1zuuA.t2k.a2m with 43 sequences, total weight= 5.27814 avg weight= 0.122747 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zuuA/info/1zuuA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zuuA/nostruct-align/1zuuA.t2k.a2m.gz, have 152416 columns in 658 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t5bA/nostruct-align/1t5bA.t2k.a2m.gz
# 1t5bA.t2k.a2m with 446 sequences, total weight= 446 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0924 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t5bA/info/1t5bA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1t5bA/nostruct-align/1t5bA.t2k.a2m.gz, have 152615 columns in 659 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2b61A/nostruct-align/2b61A.t2k.a2m.gz
# 2b61A.t2k.a2m with 538 sequences, total weight= 538 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01975 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2b61A/info/2b61A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2b61A/nostruct-align/2b61A.t2k.a2m.gz, have 152972 columns in 660 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wmwA/nostruct-align/1wmwA.t2k.a2m.gz
# 1wmwA.t2k.a2m with 1099 sequences, total weight= 893.325 avg weight= 0.812853 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30454 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wmwA/info/1wmwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wmwA/nostruct-align/1wmwA.t2k.a2m.gz, have 153300 columns in 661 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ej0A/nostruct-align/1ej0A.t2k.a2m.gz
# 1ej0A.t2k.a2m with 402 sequences, total weight= 402 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26251 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ej0A/info/1ej0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1ej0A/nostruct-align/1ej0A.t2k.a2m.gz, have 153480 columns in 662 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2axqA/nostruct-align/2axqA.t2k.a2m.gz
# 2axqA.t2k.a2m with 439 sequences, total weight= 383.833 avg weight= 0.874335 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30105 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2axqA/info/2axqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2axqA/nostruct-align/2axqA.t2k.a2m.gz, have 153925 columns in 663 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gheA/nostruct-align/1gheA.t2k.a2m.gz
# 1gheA.t2k.a2m with 613 sequences, total weight= 613 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.897571 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gheA/info/1gheA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gheA/nostruct-align/1gheA.t2k.a2m.gz, have 154095 columns in 664 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kq6A/nostruct-align/1kq6A.t2k.a2m.gz
# 1kq6A.t2k.a2m with 120 sequences, total weight= 61.4155 avg weight= 0.511796 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kq6A/info/1kq6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kq6A/nostruct-align/1kq6A.t2k.a2m.gz, have 154235 columns in 665 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t0pB/nostruct-align/1t0pB.t2k.a2m.gz
# 1t0pB.t2k.a2m with 82 sequences, total weight= 10.1844 avg weight= 0.1242 29 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t0pB/info/1t0pB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1t0pB/nostruct-align/1t0pB.t2k.a2m.gz, have 154321 columns in 666 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r6xA/nostruct-align/1r6xA.t2k.a2m.gz
# 1r6xA.t2k.a2m with 133 sequences, total weight= 20.6079 avg weight= 0.154947 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r6xA/info/1r6xA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r6xA/nostruct-align/1r6xA.t2k.a2m.gz, have 154707 columns in 667 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l6rA/nostruct-align/1l6rA.t2k.a2m.gz
# 1l6rA.t2k.a2m with 417 sequences, total weight= 417 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12012 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l6rA/info/1l6rA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1l6rA/nostruct-align/1l6rA.t2k.a2m.gz, have 154932 columns in 668 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3s/3sdhA/nostruct-align/3sdhA.t2k.a2m.gz
# 3sdhA.t2k.a2m with 1088 sequences, total weight= 112.045 avg weight= 0.102982 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30696 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3s/3sdhA/info/3sdhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/3s/3sdhA/nostruct-align/3sdhA.t2k.a2m.gz, have 155077 columns in 669 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nepA/nostruct-align/1nepA.t2k.a2m.gz
# 1nepA.t2k.a2m with 61 sequences, total weight= 24.7278 avg weight= 0.405374 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nepA/info/1nepA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nepA/nostruct-align/1nepA.t2k.a2m.gz, have 155207 columns in 670 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wu9A/nostruct-align/1wu9A.t2k.a2m.gz
# 1wu9A.t2k.a2m with 98 sequences, total weight= 8.76715 avg weight= 0.0894607 30 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wu9A/info/1wu9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wu9A/nostruct-align/1wu9A.t2k.a2m.gz, have 155266 columns in 671 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w41A/nostruct-align/1w41A.t2k.a2m.gz
# 1w41A.t2k.a2m with 232 sequences, total weight= 30.8626 avg weight= 0.133029 45 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w41A/info/1w41A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w41A/nostruct-align/1w41A.t2k.a2m.gz, have 155365 columns in 672 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u60A/nostruct-align/1u60A.t2k.a2m.gz
# 1u60A.t2k.a2m with 149 sequences, total weight= 14.885 avg weight= 0.0998995 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u60A/info/1u60A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1u60A/nostruct-align/1u60A.t2k.a2m.gz, have 155674 columns in 673 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s2wA/nostruct-align/1s2wA.t2k.a2m.gz
# 1s2wA.t2k.a2m with 329 sequences, total weight= 49.4519 avg weight= 0.15031 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30034 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s2wA/info/1s2wA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1s2wA/nostruct-align/1s2wA.t2k.a2m.gz, have 155932 columns in 674 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jg1A/nostruct-align/1jg1A.t2k.a2m.gz
# 1jg1A.t2k.a2m with 577 sequences, total weight= 577 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.92414 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jg1A/info/1jg1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jg1A/nostruct-align/1jg1A.t2k.a2m.gz, have 156147 columns in 675 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mxiA/nostruct-align/1mxiA.t2k.a2m.gz
# 1mxiA.t2k.a2m with 321 sequences, total weight= 103.811 avg weight= 0.3234 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30282 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mxiA/info/1mxiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mxiA/nostruct-align/1mxiA.t2k.a2m.gz, have 156303 columns in 676 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rh6A/nostruct-align/1rh6A.t2k.a2m.gz
# 1rh6A.t2k.a2m with 7 sequences, total weight= 2.51144 avg weight= 0.358778 9 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rh6A/info/1rh6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rh6A/nostruct-align/1rh6A.t2k.a2m.gz, have 156358 columns in 677 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bgsA/nostruct-align/2bgsA.t2k.a2m.gz
# 2bgsA.t2k.a2m with 3374 sequences, total weight= 477.608 avg weight= 0.141556 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.33026 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bgsA/info/2bgsA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bgsA/nostruct-align/2bgsA.t2k.a2m.gz, have 156666 columns in 678 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uwfA/nostruct-align/1uwfA.t2k.a2m.gz
# 1uwfA.t2k.a2m with 48 sequences, total weight= 3.99946 avg weight= 0.0833221 17 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uwfA/info/1uwfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uwfA/nostruct-align/1uwfA.t2k.a2m.gz, have 156824 columns in 679 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m4iA/nostruct-align/1m4iA.t2k.a2m.gz
# 1m4iA.t2k.a2m with 103 sequences, total weight= 103 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24326 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m4iA/info/1m4iA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m4iA/nostruct-align/1m4iA.t2k.a2m.gz, have 157005 columns in 680 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2a2rA/nostruct-align/2a2rA.t2k.a2m.gz
# 2a2rA.t2k.a2m with 1421 sequences, total weight= 1421 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20924 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2a2rA/info/2a2rA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2a2rA/nostruct-align/2a2rA.t2k.a2m.gz, have 157215 columns in 681 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2ibaA/nostruct-align/2ibaA.t2k.a2m.gz
# 2ibaA.t2k.a2m with 140 sequences, total weight= 16.2465 avg weight= 0.116046 39 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2ibaA/info/2ibaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2ibaA/nostruct-align/2ibaA.t2k.a2m.gz, have 157510 columns in 682 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cduA/nostruct-align/2cduA.t2k.a2m.gz
# 2cduA.t2k.a2m with 4994 sequences, total weight= 4994 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09091 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cduA/info/2cduA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cduA/nostruct-align/2cduA.t2k.a2m.gz, have 157961 columns in 683 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cg5B/nostruct-align/1cg5B.t2k.a2m.gz
# 1cg5B.t2k.a2m with 1179 sequences, total weight= 33.5018 avg weight= 0.0284155 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cg5B/info/1cg5B.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1cg5B/nostruct-align/1cg5B.t2k.a2m.gz, have 158102 columns in 684 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nqzA/nostruct-align/1nqzA.t2k.a2m.gz
# 1nqzA.t2k.a2m with 760 sequences, total weight= 760 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08522 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nqzA/info/1nqzA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nqzA/nostruct-align/1nqzA.t2k.a2m.gz, have 158273 columns in 685 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1ku3A/nostruct-align/1ku3A.t2k.a2m.gz
# 1ku3A.t2k.a2m with 433 sequences, total weight= 14.2812 avg weight= 0.0329819 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1ku3A/info/1ku3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1ku3A/nostruct-align/1ku3A.t2k.a2m.gz, have 158334 columns in 686 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fr2A/nostruct-align/1fr2A.t2k.a2m.gz
# 1fr2A.t2k.a2m with 38 sequences, total weight= 4.57956 avg weight= 0.120515 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fr2A/info/1fr2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fr2A/nostruct-align/1fr2A.t2k.a2m.gz, have 158417 columns in 687 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y07A/nostruct-align/1y07A.t2k.a2m.gz
# 1y07A.t2k.a2m with 48 sequences, total weight= 12.2248 avg weight= 0.254684 28 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y07A/info/1y07A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1y07A/nostruct-align/1y07A.t2k.a2m.gz, have 158538 columns in 688 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gveA/nostruct-align/1gveA.t2k.a2m.gz
# 1gveA.t2k.a2m with 680 sequences, total weight= 401.182 avg weight= 0.589974 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30653 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gveA/info/1gveA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gveA/nostruct-align/1gveA.t2k.a2m.gz, have 158862 columns in 689 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vmbA/nostruct-align/1vmbA.t2k.a2m.gz
# 1vmbA.t2k.a2m with 227 sequences, total weight= 54.5614 avg weight= 0.240359 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vmbA/info/1vmbA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vmbA/nostruct-align/1vmbA.t2k.a2m.gz, have 158969 columns in 690 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lm5A/nostruct-align/1lm5A.t2k.a2m.gz
# 1lm5A.t2k.a2m with 198 sequences, total weight= 76.3196 avg weight= 0.385453 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lm5A/info/1lm5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lm5A/nostruct-align/1lm5A.t2k.a2m.gz, have 159158 columns in 691 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bjuA/nostruct-align/2bjuA.t2k.a2m.gz
# 2bjuA.t2k.a2m with 1037 sequences, total weight= 295.625 avg weight= 0.285077 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31231 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bjuA/info/2bjuA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bjuA/nostruct-align/2bjuA.t2k.a2m.gz, have 159487 columns in 692 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1z8oA/nostruct-align/1z8oA.t2k.a2m.gz
# 1z8oA.t2k.a2m with 3823 sequences, total weight= 3823 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05952 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1z8oA/info/1z8oA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1z8oA/nostruct-align/1z8oA.t2k.a2m.gz, have 159889 columns in 693 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p90A/nostruct-align/1p90A.t2k.a2m.gz
# 1p90A.t2k.a2m with 104 sequences, total weight= 40.3651 avg weight= 0.388126 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p90A/info/1p90A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1p90A/nostruct-align/1p90A.t2k.a2m.gz, have 160012 columns in 694 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2debA/nostruct-align/2debA.t2k.a2m.gz
# 2debA.t2k.a2m with 444 sequences, total weight= 110.963 avg weight= 0.249916 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30229 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2debA/info/2debA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2debA/nostruct-align/2debA.t2k.a2m.gz, have 160639 columns in 695 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uuyA/nostruct-align/1uuyA.t2k.a2m.gz
# 1uuyA.t2k.a2m with 423 sequences, total weight= 147.342 avg weight= 0.348326 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30281 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uuyA/info/1uuyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uuyA/nostruct-align/1uuyA.t2k.a2m.gz, have 160800 columns in 696 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c44A/nostruct-align/1c44A.t2k.a2m.gz
# 1c44A.t2k.a2m with 154 sequences, total weight= 97.5553 avg weight= 0.633476 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c44A/info/1c44A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1c44A/nostruct-align/1c44A.t2k.a2m.gz, have 160923 columns in 697 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l5oA/nostruct-align/1l5oA.t2k.a2m.gz
# 1l5oA.t2k.a2m with 97 sequences, total weight= 16.9177 avg weight= 0.17441 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l5oA/info/1l5oA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1l5oA/nostruct-align/1l5oA.t2k.a2m.gz, have 161269 columns in 698 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rtu/nostruct-align/1rtu.t2k.a2m.gz
# 1rtu.t2k.a2m with 77 sequences, total weight= 6.70341 avg weight= 0.0870572 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rtu/info/1rtu.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rtu/nostruct-align/1rtu.t2k.a2m.gz, have 161383 columns in 699 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2oyzA/nostruct-align/2oyzA.t2k.a2m.gz
# 2oyzA.t2k.a2m with 135 sequences, total weight= 9.07581 avg weight= 0.0672282 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2oyzA/info/2oyzA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2oyzA/nostruct-align/2oyzA.t2k.a2m.gz, have 161477 columns in 700 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bk9A/nostruct-align/2bk9A.t2k.a2m.gz
# 2bk9A.t2k.a2m with 888 sequences, total weight= 251.174 avg weight= 0.282853 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31495 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bk9A/info/2bk9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bk9A/nostruct-align/2bk9A.t2k.a2m.gz, have 161630 columns in 701 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2akzA/nostruct-align/2akzA.t2k.a2m.gz
# 2akzA.t2k.a2m with 1201 sequences, total weight= 54.2192 avg weight= 0.0451451 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2akzA/info/2akzA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2akzA/nostruct-align/2akzA.t2k.a2m.gz, have 162065 columns in 702 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2oaiA/nostruct-align/2oaiA.t2k.a2m.gz
# 2oaiA.t2k.a2m with 997 sequences, total weight= 73.382 avg weight= 0.0736028 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30247 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2oaiA/info/2oaiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2oaiA/nostruct-align/2oaiA.t2k.a2m.gz, have 162145 columns in 703 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n97A/nostruct-align/1n97A.t2k.a2m.gz
# 1n97A.t2k.a2m with 2841 sequences, total weight= 2841 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11643 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n97A/info/1n97A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1n97A/nostruct-align/1n97A.t2k.a2m.gz, have 162530 columns in 704 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k92A/nostruct-align/1k92A.t2k.a2m.gz
# 1k92A.t2k.a2m with 194 sequences, total weight= 16.0941 avg weight= 0.0829593 31 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k92A/info/1k92A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1k92A/nostruct-align/1k92A.t2k.a2m.gz, have 162974 columns in 705 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pkhA/nostruct-align/1pkhA.t2k.a2m.gz
# 1pkhA.t2k.a2m with 228 sequences, total weight= 118.296 avg weight= 0.518842 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30071 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pkhA/info/1pkhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pkhA/nostruct-align/1pkhA.t2k.a2m.gz, have 163156 columns in 706 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xg0A/nostruct-align/1xg0A.t2k.a2m.gz
# 1xg0A.t2k.a2m with 15 sequences, total weight= 3.74843 avg weight= 0.249895 13 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xg0A/info/1xg0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xg0A/nostruct-align/1xg0A.t2k.a2m.gz, have 163232 columns in 707 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2ccjA/nostruct-align/2ccjA.t2k.a2m.gz
# 2ccjA.t2k.a2m with 734 sequences, total weight= 734 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1798 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2ccjA/info/2ccjA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2ccjA/nostruct-align/2ccjA.t2k.a2m.gz, have 163428 columns in 708 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1it2A/nostruct-align/1it2A.t2k.a2m.gz
# 1it2A.t2k.a2m with 1267 sequences, total weight= 90.3584 avg weight= 0.0713168 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3055 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1it2A/info/1it2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1it2A/nostruct-align/1it2A.t2k.a2m.gz, have 163574 columns in 709 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vbwA/nostruct-align/1vbwA.t2k.a2m.gz
# 1vbwA.t2k.a2m with 130 sequences, total weight= 14.1929 avg weight= 0.109176 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vbwA/info/1vbwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vbwA/nostruct-align/1vbwA.t2k.a2m.gz, have 163642 columns in 710 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qb7A/nostruct-align/1qb7A.t2k.a2m.gz
# 1qb7A.t2k.a2m with 383 sequences, total weight= 383 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2775 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qb7A/info/1qb7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qb7A/nostruct-align/1qb7A.t2k.a2m.gz, have 163878 columns in 711 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nn5A/nostruct-align/1nn5A.t2k.a2m.gz
# 1nn5A.t2k.a2m with 238 sequences, total weight= 157.97 avg weight= 0.663739 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30106 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nn5A/info/1nn5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nn5A/nostruct-align/1nn5A.t2k.a2m.gz, have 164082 columns in 712 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q1uA/nostruct-align/1q1uA.t2k.a2m.gz
# 1q1uA.t2k.a2m with 298 sequences, total weight= 24.3901 avg weight= 0.0818461 42 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q1uA/info/1q1uA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1q1uA/nostruct-align/1q1uA.t2k.a2m.gz, have 164220 columns in 713 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ucrA/nostruct-align/1ucrA.t2k.a2m.gz
# 1ucrA.t2k.a2m with 12 sequences, total weight= 4.97156 avg weight= 0.414296 17 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ucrA/info/1ucrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1ucrA/nostruct-align/1ucrA.t2k.a2m.gz, have 164294 columns in 714 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q7lB/nostruct-align/1q7lB.t2k.a2m.gz
# 1q7lB.t2k.a2m with 35 sequences, total weight= 5.36389 avg weight= 0.153254 22 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q7lB/info/1q7lB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1q7lB/nostruct-align/1q7lB.t2k.a2m.gz, have 164382 columns in 715 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s95A/nostruct-align/1s95A.t2k.a2m.gz
# 1s95A.t2k.a2m with 847 sequences, total weight= 114.215 avg weight= 0.134846 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30151 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s95A/info/1s95A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1s95A/nostruct-align/1s95A.t2k.a2m.gz, have 164706 columns in 716 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jykA/nostruct-align/1jykA.t2k.a2m.gz
# 1jykA.t2k.a2m with 635 sequences, total weight= 635 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16016 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jykA/info/1jykA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jykA/nostruct-align/1jykA.t2k.a2m.gz, have 164935 columns in 717 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uzmA/nostruct-align/1uzmA.t2k.a2m.gz
# 1uzmA.t2k.a2m with 8982 sequences, total weight= 8982 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27167 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uzmA/info/1uzmA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uzmA/nostruct-align/1uzmA.t2k.a2m.gz, have 165162 columns in 718 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qazA/nostruct-align/1qazA.t2k.a2m.gz
# 1qazA.t2k.a2m with 17 sequences, total weight= 6.59154 avg weight= 0.387738 15 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qazA/info/1qazA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qazA/nostruct-align/1qazA.t2k.a2m.gz, have 165513 columns in 719 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1z72A/nostruct-align/1z72A.t2k.a2m.gz
# 1z72A.t2k.a2m with 142 sequences, total weight= 142 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27886 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1z72A/info/1z72A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1z72A/nostruct-align/1z72A.t2k.a2m.gz, have 165729 columns in 720 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rg8A/nostruct-align/1rg8A.t2k.a2m.gz
# 1rg8A.t2k.a2m with 365 sequences, total weight= 34.014 avg weight= 0.0931891 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rg8A/info/1rg8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rg8A/nostruct-align/1rg8A.t2k.a2m.gz, have 165870 columns in 721 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pkoA/nostruct-align/1pkoA.t2k.a2m.gz
# 1pkoA.t2k.a2m with 2813 sequences, total weight= 2813 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1398 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pkoA/info/1pkoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pkoA/nostruct-align/1pkoA.t2k.a2m.gz, have 165994 columns in 722 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vkeA/nostruct-align/1vkeA.t2k.a2m.gz
# 1vkeA.t2k.a2m with 181 sequences, total weight= 156.855 avg weight= 0.866603 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vkeA/info/1vkeA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vkeA/nostruct-align/1vkeA.t2k.a2m.gz, have 166111 columns in 723 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kveA/nostruct-align/1kveA.t2k.a2m.gz
# 1kveA.t2k.a2m with 3 sequences, total weight= 1.63532 avg weight= 0.545108 7 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kveA/info/1kveA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kveA/nostruct-align/1kveA.t2k.a2m.gz, have 166174 columns in 724 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hy5C/nostruct-align/2hy5C.t2k.a2m.gz
# 2hy5C.t2k.a2m with 92 sequences, total weight= 23.5824 avg weight= 0.25633 42 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hy5C/info/2hy5C.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hy5C/nostruct-align/2hy5C.t2k.a2m.gz, have 166275 columns in 725 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pgs/nostruct-align/1pgs.t2k.a2m.gz
# 1pgs.t2k.a2m with 10 sequences, total weight= 3.77573 avg weight= 0.377573 11 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pgs/info/1pgs.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pgs/nostruct-align/1pgs.t2k.a2m.gz, have 166586 columns in 726 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2ayh/nostruct-align/2ayh.t2k.a2m.gz
# 2ayh.t2k.a2m with 305 sequences, total weight= 297.468 avg weight= 0.975306 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2ayh/info/2ayh.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2ayh/nostruct-align/2ayh.t2k.a2m.gz, have 166800 columns in 727 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xvxA/nostruct-align/1xvxA.t2k.a2m.gz
# 1xvxA.t2k.a2m with 496 sequences, total weight= 496 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06749 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xvxA/info/1xvxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xvxA/nostruct-align/1xvxA.t2k.a2m.gz, have 167111 columns in 728 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dysA/nostruct-align/1dysA.t2k.a2m.gz
# 1dysA.t2k.a2m with 86 sequences, total weight= 16.2234 avg weight= 0.188644 35 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dysA/info/1dysA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dysA/nostruct-align/1dysA.t2k.a2m.gz, have 167456 columns in 729 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2i8dA/nostruct-align/2i8dA.t2k.a2m.gz
# 2i8dA.t2k.a2m with 27 sequences, total weight= 12.3221 avg weight= 0.456373 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2i8dA/info/2i8dA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2i8dA/nostruct-align/2i8dA.t2k.a2m.gz, have 167577 columns in 730 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2dxeA/nostruct-align/2dxeA.t2k.a2m.gz
# 2dxeA.t2k.a2m with 1154 sequences, total weight= 70.5166 avg weight= 0.0611062 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30053 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2dxeA/info/2dxeA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2dxeA/nostruct-align/2dxeA.t2k.a2m.gz, have 167731 columns in 731 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x8hA/nostruct-align/1x8hA.t2k.a2m.gz
# 1x8hA.t2k.a2m with 535 sequences, total weight= 535 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12368 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x8hA/info/1x8hA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1x8hA/nostruct-align/1x8hA.t2k.a2m.gz, have 167958 columns in 732 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k07A/nostruct-align/1k07A.t2k.a2m.gz
# 1k07A.t2k.a2m with 448 sequences, total weight= 448 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01959 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k07A/info/1k07A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1k07A/nostruct-align/1k07A.t2k.a2m.gz, have 168220 columns in 733 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1avwB/nostruct-align/1avwB.t2k.a2m.gz
# 1avwB.t2k.a2m with 225 sequences, total weight= 47.1453 avg weight= 0.209534 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1avwB/info/1avwB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1avwB/nostruct-align/1avwB.t2k.a2m.gz, have 168391 columns in 734 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q52A/nostruct-align/1q52A.t2k.a2m.gz
# 1q52A.t2k.a2m with 1230 sequences, total weight= 244.54 avg weight= 0.198813 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30948 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q52A/info/1q52A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1q52A/nostruct-align/1q52A.t2k.a2m.gz, have 168660 columns in 735 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1od3A/nostruct-align/1od3A.t2k.a2m.gz
# 1od3A.t2k.a2m with 105 sequences, total weight= 52.9816 avg weight= 0.504586 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1od3A/info/1od3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1od3A/nostruct-align/1od3A.t2k.a2m.gz, have 168791 columns in 736 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vyiA/nostruct-align/1vyiA.t2k.a2m.gz
# 1vyiA.t2k.a2m with 139 sequences, total weight= 2.58243 avg weight= 0.0185786 15 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vyiA/info/1vyiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vyiA/nostruct-align/1vyiA.t2k.a2m.gz, have 168902 columns in 737 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2guiA/nostruct-align/2guiA.t2k.a2m.gz
# 2guiA.t2k.a2m with 1340 sequences, total weight= 1340 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25021 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2guiA/info/2guiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2guiA/nostruct-align/2guiA.t2k.a2m.gz, have 169078 columns in 738 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qwyA/nostruct-align/1qwyA.t2k.a2m.gz
# 1qwyA.t2k.a2m with 611 sequences, total weight= 611 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1186 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qwyA/info/1qwyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qwyA/nostruct-align/1qwyA.t2k.a2m.gz, have 169312 columns in 739 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dcs/nostruct-align/1dcs.t2k.a2m.gz
# 1dcs.t2k.a2m with 457 sequences, total weight= 111.09 avg weight= 0.243085 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30381 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dcs/info/1dcs.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dcs/nostruct-align/1dcs.t2k.a2m.gz, have 169591 columns in 740 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hhgA/nostruct-align/2hhgA.t2k.a2m.gz
# 2hhgA.t2k.a2m with 2218 sequences, total weight= 2218 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13094 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hhgA/info/2hhgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hhgA/nostruct-align/2hhgA.t2k.a2m.gz, have 169723 columns in 741 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2au7A/nostruct-align/2au7A.t2k.a2m.gz
# 2au7A.t2k.a2m with 631 sequences, total weight= 42.9304 avg weight= 0.0680356 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2au7A/info/2au7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2au7A/nostruct-align/2au7A.t2k.a2m.gz, have 169898 columns in 742 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fs6A/nostruct-align/2fs6A.t2k.a2m.gz
# 2fs6A.t2k.a2m with 538 sequences, total weight= 51.3168 avg weight= 0.0953844 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fs6A/info/2fs6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fs6A/nostruct-align/2fs6A.t2k.a2m.gz, have 170034 columns in 743 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2f0aA/nostruct-align/2f0aA.t2k.a2m.gz
# 2f0aA.t2k.a2m with 3716 sequences, total weight= 355.65 avg weight= 0.0957078 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3324 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2f0aA/info/2f0aA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2f0aA/nostruct-align/2f0aA.t2k.a2m.gz, have 170126 columns in 744 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m8aA/nostruct-align/1m8aA.t2k.a2m.gz
# 1m8aA.t2k.a2m with 308 sequences, total weight= 40.4028 avg weight= 0.131178 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m8aA/info/1m8aA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m8aA/nostruct-align/1m8aA.t2k.a2m.gz, have 170187 columns in 745 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s1fA/nostruct-align/1s1fA.t2k.a2m.gz
# 1s1fA.t2k.a2m with 2904 sequences, total weight= 2904 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08684 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s1fA/info/1s1fA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1s1fA/nostruct-align/1s1fA.t2k.a2m.gz, have 170584 columns in 746 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hewF/nostruct-align/2hewF.t2k.a2m.gz
# 2hewF.t2k.a2m with 15 sequences, total weight= 4.28343 avg weight= 0.285562 15 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hewF/info/2hewF.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hewF/nostruct-align/2hewF.t2k.a2m.gz, have 170712 columns in 747 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3b/3bamA/nostruct-align/3bamA.t2k.a2m.gz
# 3bamA.t2k.a2m with 7 sequences, total weight= 6.28676 avg weight= 0.898108 12 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3b/3bamA/info/3bamA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/3b/3bamA/nostruct-align/3bamA.t2k.a2m.gz, have 170918 columns in 748 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iq4A/nostruct-align/1iq4A.t2k.a2m.gz
# 1iq4A.t2k.a2m with 284 sequences, total weight= 23.037 avg weight= 0.0811163 39 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iq4A/info/1iq4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1iq4A/nostruct-align/1iq4A.t2k.a2m.gz, have 171097 columns in 749 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o9rA/nostruct-align/1o9rA.t2k.a2m.gz
# 1o9rA.t2k.a2m with 158 sequences, total weight= 111.072 avg weight= 0.702987 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30049 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o9rA/info/1o9rA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1o9rA/nostruct-align/1o9rA.t2k.a2m.gz, have 171259 columns in 750 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bjqA/nostruct-align/2bjqA.t2k.a2m.gz
# 2bjqA.t2k.a2m with 18 sequences, total weight= 4.92325 avg weight= 0.273514 18 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bjqA/info/2bjqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bjqA/nostruct-align/2bjqA.t2k.a2m.gz, have 171599 columns in 751 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vk1A/nostruct-align/1vk1A.t2k.a2m.gz
# 1vk1A.t2k.a2m with 213 sequences, total weight= 107.494 avg weight= 0.504665 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vk1A/info/1vk1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vk1A/nostruct-align/1vk1A.t2k.a2m.gz, have 171831 columns in 752 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t1dA/nostruct-align/1t1dA.t2k.a2m.gz
# 1t1dA.t2k.a2m with 316 sequences, total weight= 29.203 avg weight= 0.0924147 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t1dA/info/1t1dA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1t1dA/nostruct-align/1t1dA.t2k.a2m.gz, have 171931 columns in 753 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t6fA/nostruct-align/1t6fA.t2k.a2m.gz
# 1t6fA.t2k.a2m with 22 sequences, total weight= 2.38507 avg weight= 0.108412 10 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t6fA/info/1t6fA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1t6fA/nostruct-align/1t6fA.t2k.a2m.gz, have 171968 columns in 754 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bhuA/nostruct-align/2bhuA.t2k.a2m.gz
# 2bhuA.t2k.a2m with 1673 sequences, total weight= 1673 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10114 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bhuA/info/2bhuA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bhuA/nostruct-align/2bhuA.t2k.a2m.gz, have 172548 columns in 755 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sauA/nostruct-align/1sauA.t2k.a2m.gz
# 1sauA.t2k.a2m with 69 sequences, total weight= 14.2 avg weight= 0.205797 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sauA/info/1sauA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1sauA/nostruct-align/1sauA.t2k.a2m.gz, have 172662 columns in 756 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2jafA/nostruct-align/2jafA.t2k.a2m.gz
# 2jafA.t2k.a2m with 260 sequences, total weight= 94.5752 avg weight= 0.363751 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30062 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2jafA/info/2jafA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2jafA/nostruct-align/2jafA.t2k.a2m.gz, have 172904 columns in 757 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s1dA/nostruct-align/1s1dA.t2k.a2m.gz
# 1s1dA.t2k.a2m with 25 sequences, total weight= 5.43036 avg weight= 0.217215 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s1dA/info/1s1dA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1s1dA/nostruct-align/1s1dA.t2k.a2m.gz, have 173221 columns in 758 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2e/2ewhA/nostruct-align/2ewhA.t2k.a2m.gz
# 2ewhA.t2k.a2m with 389 sequences, total weight= 23.2008 avg weight= 0.0596421 45 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2e/2ewhA/info/2ewhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2e/2ewhA/nostruct-align/2ewhA.t2k.a2m.gz, have 173313 columns in 759 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1aqzA/nostruct-align/1aqzA.t2k.a2m.gz
# 1aqzA.t2k.a2m with 18 sequences, total weight= 1.93951 avg weight= 0.107751 9 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1aqzA/info/1aqzA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1aqzA/nostruct-align/1aqzA.t2k.a2m.gz, have 173455 columns in 760 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vlaA/nostruct-align/1vlaA.t2k.a2m.gz
# 1vlaA.t2k.a2m with 151 sequences, total weight= 151 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24757 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vlaA/info/1vlaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vlaA/nostruct-align/1vlaA.t2k.a2m.gz, have 173599 columns in 761 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vclA/nostruct-align/1vclA.t2k.a2m.gz
# 1vclA.t2k.a2m with 309 sequences, total weight= 42.1852 avg weight= 0.136522 24 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vclA/info/1vclA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vclA/nostruct-align/1vclA.t2k.a2m.gz, have 174031 columns in 762 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1whi/nostruct-align/1whi.t2k.a2m.gz
# 1whi.t2k.a2m with 301 sequences, total weight= 17.1036 avg weight= 0.0568227 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1whi/info/1whi.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1whi/nostruct-align/1whi.t2k.a2m.gz, have 174153 columns in 763 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1ayl/nostruct-align/1ayl.t2k.a2m.gz
# 1ayl.t2k.a2m with 128 sequences, total weight= 22.6027 avg weight= 0.176583 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1ayl/info/1ayl.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1ayl/nostruct-align/1ayl.t2k.a2m.gz, have 174685 columns in 764 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ykiA/nostruct-align/1ykiA.t2k.a2m.gz
# 1ykiA.t2k.a2m with 504 sequences, total weight= 504 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15654 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ykiA/info/1ykiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1ykiA/nostruct-align/1ykiA.t2k.a2m.gz, have 174901 columns in 765 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h2cA/nostruct-align/1h2cA.t2k.a2m.gz
# 1h2cA.t2k.a2m with 21 sequences, total weight= 2.64583 avg weight= 0.125992 12 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h2cA/info/1h2cA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h2cA/nostruct-align/1h2cA.t2k.a2m.gz, have 175025 columns in 766 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k7jA/nostruct-align/1k7jA.t2k.a2m.gz
# 1k7jA.t2k.a2m with 291 sequences, total weight= 71.3352 avg weight= 0.245138 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30119 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k7jA/info/1k7jA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1k7jA/nostruct-align/1k7jA.t2k.a2m.gz, have 175231 columns in 767 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1geeA/nostruct-align/1geeA.t2k.a2m.gz
# 1geeA.t2k.a2m with 4913 sequences, total weight= 2337.12 avg weight= 0.475702 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32064 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1geeA/info/1geeA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1geeA/nostruct-align/1geeA.t2k.a2m.gz, have 175492 columns in 768 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vjkA/nostruct-align/1vjkA.t2k.a2m.gz
# 1vjkA.t2k.a2m with 200 sequences, total weight= 94.8591 avg weight= 0.474295 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30086 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vjkA/info/1vjkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vjkA/nostruct-align/1vjkA.t2k.a2m.gz, have 175579 columns in 769 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2jcqA/nostruct-align/2jcqA.t2k.a2m.gz
# 2jcqA.t2k.a2m with 526 sequences, total weight= 40.4 avg weight= 0.0768061 45 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2jcqA/info/2jcqA.stride-mixed.strand_sep
WARNING: skipping f, since it is lower case.
# After reading /projects/compbio/experiments/models.97/pdb/2j/2jcqA/nostruct-align/2jcqA.t2k.a2m.gz, have 175728 columns in 770 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hc8A/nostruct-align/2hc8A.t2k.a2m.gz
# 2hc8A.t2k.a2m with 4285 sequences, total weight= 83.5026 avg weight= 0.0194872 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30841 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hc8A/info/2hc8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hc8A/nostruct-align/2hc8A.t2k.a2m.gz, have 175841 columns in 771 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cwcA/nostruct-align/2cwcA.t2k.a2m.gz
# 2cwcA.t2k.a2m with 168 sequences, total weight= 168 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21882 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cwcA/info/2cwcA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cwcA/nostruct-align/2cwcA.t2k.a2m.gz, have 176125 columns in 772 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ysqA/nostruct-align/1ysqA.t2k.a2m.gz
# 1ysqA.t2k.a2m with 649 sequences, total weight= 649 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2751 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ysqA/info/1ysqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1ysqA/nostruct-align/1ysqA.t2k.a2m.gz, have 176306 columns in 773 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1irqA/nostruct-align/1irqA.t2k.a2m.gz
# 1irqA.t2k.a2m with 15 sequences, total weight= 2.48485 avg weight= 0.165657 9 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1irqA/info/1irqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1irqA/nostruct-align/1irqA.t2k.a2m.gz, have 176354 columns in 774 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t9iA/nostruct-align/1t9iA.t2k.a2m.gz
# 1t9iA.t2k.a2m with 203 sequences, total weight= 203 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26215 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t9iA/info/1t9iA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1t9iA/nostruct-align/1t9iA.t2k.a2m.gz, have 176507 columns in 775 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oshA/nostruct-align/1oshA.t2k.a2m.gz
# 1oshA.t2k.a2m with 1317 sequences, total weight= 1317 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23006 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oshA/info/1oshA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oshA/nostruct-align/1oshA.t2k.a2m.gz, have 176723 columns in 776 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2icyA/nostruct-align/2icyA.t2k.a2m.gz
# 2icyA.t2k.a2m with 255 sequences, total weight= 91.1193 avg weight= 0.357331 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30068 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2icyA/info/2icyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2icyA/nostruct-align/2icyA.t2k.a2m.gz, have 177179 columns in 777 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fs1A/nostruct-align/1fs1A.t2k.a2m.gz
# 1fs1A.t2k.a2m with 17 sequences, total weight= 2.13035 avg weight= 0.125314 11 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fs1A/info/1fs1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fs1A/nostruct-align/1fs1A.t2k.a2m.gz, have 177220 columns in 778 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1aop/nostruct-align/1aop.t2k.a2m.gz
# 1aop.t2k.a2m with 278 sequences, total weight= 89.5202 avg weight= 0.322015 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30064 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1aop/info/1aop.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1aop/nostruct-align/1aop.t2k.a2m.gz, have 177676 columns in 779 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/7a/7a3hA/nostruct-align/7a3hA.t2k.a2m.gz
# 7a3hA.t2k.a2m with 249 sequences, total weight= 249 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16652 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/7a/7a3hA/info/7a3hA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/7a/7a3hA/nostruct-align/7a3hA.t2k.a2m.gz, have 177976 columns in 780 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3c/3caoA/nostruct-align/3caoA.t2k.a2m.gz
# 3caoA.t2k.a2m with 87 sequences, total weight= 57.7907 avg weight= 0.664261 44 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3c/3caoA/info/3caoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/3c/3caoA/nostruct-align/3caoA.t2k.a2m.gz, have 178079 columns in 781 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y7tA/nostruct-align/1y7tA.t2k.a2m.gz
# 1y7tA.t2k.a2m with 1268 sequences, total weight= 73.9837 avg weight= 0.0583467 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30272 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y7tA/info/1y7tA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1y7tA/nostruct-align/1y7tA.t2k.a2m.gz, have 178406 columns in 782 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tfe/nostruct-align/1tfe.t2k.a2m.gz
# 1tfe.t2k.a2m with 185 sequences, total weight= 17.9336 avg weight= 0.0969384 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tfe/info/1tfe.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tfe/nostruct-align/1tfe.t2k.a2m.gz, have 178548 columns in 783 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lbu/nostruct-align/1lbu.t2k.a2m.gz
# 1lbu.t2k.a2m with 208 sequences, total weight= 208 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24614 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lbu/info/1lbu.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lbu/nostruct-align/1lbu.t2k.a2m.gz, have 178761 columns in 784 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qd1A/nostruct-align/1qd1A.t2k.a2m.gz
# 1qd1A.t2k.a2m with 33 sequences, total weight= 7.07516 avg weight= 0.214399 20 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qd1A/info/1qd1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qd1A/nostruct-align/1qd1A.t2k.a2m.gz, have 179080 columns in 785 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2i8gA/nostruct-align/2i8gA.t2k.a2m.gz
# 2i8gA.t2k.a2m with 8 sequences, total weight= 2.5684 avg weight= 0.32105 11 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2i8gA/info/2i8gA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2i8gA/nostruct-align/2i8gA.t2k.a2m.gz, have 179227 columns in 786 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xfsA/nostruct-align/1xfsA.t2k.a2m.gz
# 1xfsA.t2k.a2m with 113 sequences, total weight= 113 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2456 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xfsA/info/1xfsA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xfsA/nostruct-align/1xfsA.t2k.a2m.gz, have 179381 columns in 787 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zd7A/nostruct-align/1zd7A.t2k.a2m.gz
# 1zd7A.t2k.a2m with 88 sequences, total weight= 88 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0919 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zd7A/info/1zd7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zd7A/nostruct-align/1zd7A.t2k.a2m.gz, have 179540 columns in 788 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zaiA/nostruct-align/1zaiA.t2k.a2m.gz
# 1zaiA.t2k.a2m with 449 sequences, total weight= 15.6218 avg weight= 0.0347924 32 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zaiA/info/1zaiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zaiA/nostruct-align/1zaiA.t2k.a2m.gz, have 179903 columns in 789 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vhsA/nostruct-align/1vhsA.t2k.a2m.gz
# 1vhsA.t2k.a2m with 1176 sequences, total weight= 1176 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.921914 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vhsA/info/1vhsA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vhsA/nostruct-align/1vhsA.t2k.a2m.gz, have 180068 columns in 790 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/8t/8tlnE/nostruct-align/8tlnE.t2k.a2m.gz
# 8tlnE.t2k.a2m with 144 sequences, total weight= 31.2173 avg weight= 0.216787 41 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/8t/8tlnE/info/8tlnE.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/8t/8tlnE/nostruct-align/8tlnE.t2k.a2m.gz, have 180384 columns in 791 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1muwA/nostruct-align/1muwA.t2k.a2m.gz
# 1muwA.t2k.a2m with 149 sequences, total weight= 28.9184 avg weight= 0.194083 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1muwA/info/1muwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1muwA/nostruct-align/1muwA.t2k.a2m.gz, have 180770 columns in 792 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wkcA/nostruct-align/1wkcA.t2k.a2m.gz
# 1wkcA.t2k.a2m with 280 sequences, total weight= 118.72 avg weight= 0.424001 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30252 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wkcA/info/1wkcA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wkcA/nostruct-align/1wkcA.t2k.a2m.gz, have 180938 columns in 793 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1orvA/nostruct-align/1orvA.t2k.a2m.gz
# 1orvA.t2k.a2m with 363 sequences, total weight= 363 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.881484 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1orvA/info/1orvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1orvA/nostruct-align/1orvA.t2k.a2m.gz, have 181666 columns in 794 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vbiA/nostruct-align/1vbiA.t2k.a2m.gz
# 1vbiA.t2k.a2m with 163 sequences, total weight= 35.2083 avg weight= 0.216002 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vbiA/info/1vbiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vbiA/nostruct-align/1vbiA.t2k.a2m.gz, have 182006 columns in 795 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jhgA/nostruct-align/1jhgA.t2k.a2m.gz
# 1jhgA.t2k.a2m with 47 sequences, total weight= 12.7814 avg weight= 0.271944 30 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jhgA/info/1jhgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jhgA/nostruct-align/1jhgA.t2k.a2m.gz, have 182107 columns in 796 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yiiA/nostruct-align/1yiiA.t2k.a2m.gz
# 1yiiA.t2k.a2m with 513 sequences, total weight= 52.3855 avg weight= 0.102116 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30031 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yiiA/info/1yiiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yiiA/nostruct-align/1yiiA.t2k.a2m.gz, have 182423 columns in 797 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ojqA/nostruct-align/1ojqA.t2k.a2m.gz
# 1ojqA.t2k.a2m with 44 sequences, total weight= 24.937 avg weight= 0.56675 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ojqA/info/1ojqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1ojqA/nostruct-align/1ojqA.t2k.a2m.gz, have 182635 columns in 798 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1umkA/nostruct-align/1umkA.t2k.a2m.gz
# 1umkA.t2k.a2m with 948 sequences, total weight= 948 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22131 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1umkA/info/1umkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1umkA/nostruct-align/1umkA.t2k.a2m.gz, have 182906 columns in 799 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1aohA/nostruct-align/1aohA.t2k.a2m.gz
# 1aohA.t2k.a2m with 43 sequences, total weight= 18.5323 avg weight= 0.430984 31 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1aohA/info/1aohA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1aohA/nostruct-align/1aohA.t2k.a2m.gz, have 183049 columns in 800 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gmuA/nostruct-align/1gmuA.t2k.a2m.gz
# 1gmuA.t2k.a2m with 92 sequences, total weight= 31.356 avg weight= 0.340826 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gmuA/info/1gmuA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gmuA/nostruct-align/1gmuA.t2k.a2m.gz, have 183187 columns in 801 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kngA/nostruct-align/1kngA.t2k.a2m.gz
# 1kngA.t2k.a2m with 572 sequences, total weight= 572 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23583 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kngA/info/1kngA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kngA/nostruct-align/1kngA.t2k.a2m.gz, have 183331 columns in 802 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g6gA/nostruct-align/1g6gA.t2k.a2m.gz
# 1g6gA.t2k.a2m with 274 sequences, total weight= 244.266 avg weight= 0.891482 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30031 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g6gA/info/1g6gA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1g6gA/nostruct-align/1g6gA.t2k.a2m.gz, have 183458 columns in 803 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x7vA/nostruct-align/1x7vA.t2k.a2m.gz
# 1x7vA.t2k.a2m with 208 sequences, total weight= 208 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1966 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x7vA/info/1x7vA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1x7vA/nostruct-align/1x7vA.t2k.a2m.gz, have 183556 columns in 804 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nrkA/nostruct-align/2nrkA.t2k.a2m.gz
# 2nrkA.t2k.a2m with 187 sequences, total weight= 74.6903 avg weight= 0.399413 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30062 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nrkA/info/2nrkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2n/2nrkA/nostruct-align/2nrkA.t2k.a2m.gz, have 183721 columns in 805 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tuvA/nostruct-align/1tuvA.t2k.a2m.gz
# 1tuvA.t2k.a2m with 126 sequences, total weight= 52.949 avg weight= 0.42023 42 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tuvA/info/1tuvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tuvA/nostruct-align/1tuvA.t2k.a2m.gz, have 183824 columns in 806 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e19A/nostruct-align/1e19A.t2k.a2m.gz
# 1e19A.t2k.a2m with 437 sequences, total weight= 182.642 avg weight= 0.417944 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30422 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e19A/info/1e19A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1e19A/nostruct-align/1e19A.t2k.a2m.gz, have 184137 columns in 807 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h32B/nostruct-align/1h32B.t2k.a2m.gz
# 1h32B.t2k.a2m with 174 sequences, total weight= 142.478 avg weight= 0.818841 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h32B/info/1h32B.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h32B/nostruct-align/1h32B.t2k.a2m.gz, have 184271 columns in 808 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mjhA/nostruct-align/1mjhA.t2k.a2m.gz
# 1mjhA.t2k.a2m with 688 sequences, total weight= 688 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09537 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mjhA/info/1mjhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mjhA/nostruct-align/1mjhA.t2k.a2m.gz, have 184414 columns in 809 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g5aA/nostruct-align/1g5aA.t2k.a2m.gz
# 1g5aA.t2k.a2m with 713 sequences, total weight= 713 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.989836 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g5aA/info/1g5aA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1g5aA/nostruct-align/1g5aA.t2k.a2m.gz, have 185042 columns in 810 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1ako/nostruct-align/1ako.t2k.a2m.gz
# 1ako.t2k.a2m with 373 sequences, total weight= 373 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29765 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1ako/info/1ako.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1ako/nostruct-align/1ako.t2k.a2m.gz, have 185310 columns in 811 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xg0C/nostruct-align/1xg0C.t2k.a2m.gz
# 1xg0C.t2k.a2m with 732 sequences, total weight= 26.7691 avg weight= 0.0365698 45 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xg0C/info/1xg0C.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xg0C/nostruct-align/1xg0C.t2k.a2m.gz, have 185484 columns in 812 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k2eA/nostruct-align/1k2eA.t2k.a2m.gz
# 1k2eA.t2k.a2m with 799 sequences, total weight= 799 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.966778 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k2eA/info/1k2eA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1k2eA/nostruct-align/1k2eA.t2k.a2m.gz, have 185636 columns in 813 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j48A/nostruct-align/1j48A.t2k.a2m.gz
# 1j48A.t2k.a2m with 20 sequences, total weight= 3.47685 avg weight= 0.173843 15 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j48A/info/1j48A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1j48A/nostruct-align/1j48A.t2k.a2m.gz, have 185745 columns in 814 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uuzA/nostruct-align/1uuzA.t2k.a2m.gz
# 1uuzA.t2k.a2m with 16 sequences, total weight= 5.69633 avg weight= 0.356021 19 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uuzA/info/1uuzA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uuzA/nostruct-align/1uuzA.t2k.a2m.gz, have 185874 columns in 815 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f5nA/nostruct-align/1f5nA.t2k.a2m.gz
# 1f5nA.t2k.a2m with 121 sequences, total weight= 49.4839 avg weight= 0.408958 38 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f5nA/info/1f5nA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1f5nA/nostruct-align/1f5nA.t2k.a2m.gz, have 186444 columns in 816 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bt9A/nostruct-align/2bt9A.t2k.a2m.gz
# 2bt9A.t2k.a2m with 9 sequences, total weight= 3.13611 avg weight= 0.348457 11 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bt9A/info/2bt9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bt9A/nostruct-align/2bt9A.t2k.a2m.gz, have 186534 columns in 817 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qqfA/nostruct-align/1qqfA.t2k.a2m.gz
# 1qqfA.t2k.a2m with 214 sequences, total weight= 28.9376 avg weight= 0.135223 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qqfA/info/1qqfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qqfA/nostruct-align/1qqfA.t2k.a2m.gz, have 186811 columns in 818 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gy7A/nostruct-align/1gy7A.t2k.a2m.gz
# 1gy7A.t2k.a2m with 122 sequences, total weight= 29.3676 avg weight= 0.240718 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gy7A/info/1gy7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gy7A/nostruct-align/1gy7A.t2k.a2m.gz, have 186932 columns in 819 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a3aA/nostruct-align/1a3aA.t2k.a2m.gz
# 1a3aA.t2k.a2m with 435 sequences, total weight= 394.228 avg weight= 0.906272 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30135 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a3aA/info/1a3aA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1a3aA/nostruct-align/1a3aA.t2k.a2m.gz, have 187077 columns in 820 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gs5A/nostruct-align/2gs5A.t2k.a2m.gz
# 2gs5A.t2k.a2m with 295 sequences, total weight= 52.3976 avg weight= 0.177619 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gs5A/info/2gs5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gs5A/nostruct-align/2gs5A.t2k.a2m.gz, have 187270 columns in 821 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jidA/nostruct-align/1jidA.t2k.a2m.gz
# 1jidA.t2k.a2m with 53 sequences, total weight= 18.4914 avg weight= 0.348895 35 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jidA/info/1jidA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jidA/nostruct-align/1jidA.t2k.a2m.gz, have 187384 columns in 822 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2g6fX/nostruct-align/2g6fX.t2k.a2m.gz
# 2g6fX.t2k.a2m with 4746 sequences, total weight= 50.6673 avg weight= 0.0106758 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30196 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2g6fX/info/2g6fX.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2g6fX/nostruct-align/2g6fX.t2k.a2m.gz, have 187443 columns in 823 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r77A/nostruct-align/1r77A.t2k.a2m.gz
# 1r77A.t2k.a2m with 107 sequences, total weight= 28.0297 avg weight= 0.261959 35 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r77A/info/1r77A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r77A/nostruct-align/1r77A.t2k.a2m.gz, have 187542 columns in 824 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kv7A/nostruct-align/1kv7A.t2k.a2m.gz
# 1kv7A.t2k.a2m with 350 sequences, total weight= 350 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22445 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kv7A/info/1kv7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kv7A/nostruct-align/1kv7A.t2k.a2m.gz, have 188005 columns in 825 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1umzA/nostruct-align/1umzA.t2k.a2m.gz
# 1umzA.t2k.a2m with 297 sequences, total weight= 64.8012 avg weight= 0.218186 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1umzA/info/1umzA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1umzA/nostruct-align/1umzA.t2k.a2m.gz, have 188272 columns in 826 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1atzA/nostruct-align/1atzA.t2k.a2m.gz
# 1atzA.t2k.a2m with 653 sequences, total weight= 203.352 avg weight= 0.311411 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31438 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1atzA/info/1atzA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1atzA/nostruct-align/1atzA.t2k.a2m.gz, have 188456 columns in 827 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2f0cA/nostruct-align/2f0cA.t2k.a2m.gz
# 2f0cA.t2k.a2m with 16 sequences, total weight= 7.77403 avg weight= 0.485877 18 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2f0cA/info/2f0cA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2f0cA/nostruct-align/2f0cA.t2k.a2m.gz, have 188603 columns in 828 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lj8A/nostruct-align/1lj8A.t2k.a2m.gz
# 1lj8A.t2k.a2m with 145 sequences, total weight= 38.7068 avg weight= 0.266943 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lj8A/info/1lj8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lj8A/nostruct-align/1lj8A.t2k.a2m.gz, have 189095 columns in 829 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2it9A/nostruct-align/2it9A.t2k.a2m.gz
# 2it9A.t2k.a2m with 26 sequences, total weight= 8.07901 avg weight= 0.310731 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2it9A/info/2it9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2it9A/nostruct-align/2it9A.t2k.a2m.gz, have 189215 columns in 830 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qpcA/nostruct-align/1qpcA.t2k.a2m.gz
# 1qpcA.t2k.a2m with 8611 sequences, total weight= 8611 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18234 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qpcA/info/1qpcA.stride-mixed.strand_sep
WARNING: skipping d, since it is lower case.
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qpcA/nostruct-align/1qpcA.t2k.a2m.gz, have 189485 columns in 831 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h6hA/nostruct-align/1h6hA.t2k.a2m.gz
# 1h6hA.t2k.a2m with 233 sequences, total weight= 210.821 avg weight= 0.904813 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h6hA/info/1h6hA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h6hA/nostruct-align/1h6hA.t2k.a2m.gz, have 189628 columns in 832 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1ji1A/nostruct-align/1ji1A.t2k.a2m.gz
# 1ji1A.t2k.a2m with 422 sequences, total weight= 422 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04887 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1ji1A/info/1ji1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1ji1A/nostruct-align/1ji1A.t2k.a2m.gz, have 190265 columns in 833 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fobA/nostruct-align/1fobA.t2k.a2m.gz
# 1fobA.t2k.a2m with 94 sequences, total weight= 24.9657 avg weight= 0.265592 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fobA/info/1fobA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fobA/nostruct-align/1fobA.t2k.a2m.gz, have 190599 columns in 834 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h2wA/nostruct-align/1h2wA.t2k.a2m.gz
# 1h2wA.t2k.a2m with 355 sequences, total weight= 355 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.992233 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h2wA/info/1h2wA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h2wA/nostruct-align/1h2wA.t2k.a2m.gz, have 191309 columns in 835 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dwkA/nostruct-align/1dwkA.t2k.a2m.gz
# 1dwkA.t2k.a2m with 33 sequences, total weight= 6.52021 avg weight= 0.197582 23 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dwkA/info/1dwkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dwkA/nostruct-align/1dwkA.t2k.a2m.gz, have 191465 columns in 836 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fupA/nostruct-align/2fupA.t2k.a2m.gz
# 2fupA.t2k.a2m with 87 sequences, total weight= 80.1655 avg weight= 0.921442 43 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fupA/info/2fupA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fupA/nostruct-align/2fupA.t2k.a2m.gz, have 191593 columns in 837 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wvfA/nostruct-align/1wvfA.t2k.a2m.gz
# 1wvfA.t2k.a2m with 728 sequences, total weight= 728 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04074 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wvfA/info/1wvfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wvfA/nostruct-align/1wvfA.t2k.a2m.gz, have 192108 columns in 838 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hytA/nostruct-align/2hytA.t2k.a2m.gz
# 2hytA.t2k.a2m with 4946 sequences, total weight= 4946 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.857039 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hytA/info/2hytA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hytA/nostruct-align/2hytA.t2k.a2m.gz, have 192301 columns in 839 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h2bA/nostruct-align/1h2bA.t2k.a2m.gz
# 1h2bA.t2k.a2m with 2550 sequences, total weight= 2550 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25461 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h2bA/info/1h2bA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h2bA/nostruct-align/1h2bA.t2k.a2m.gz, have 192644 columns in 840 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2oocA/nostruct-align/2oocA.t2k.a2m.gz
# 2oocA.t2k.a2m with 92 sequences, total weight= 57.9378 avg weight= 0.629758 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2oocA/info/2oocA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2oocA/nostruct-align/2oocA.t2k.a2m.gz, have 192748 columns in 841 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uf5A/nostruct-align/1uf5A.t2k.a2m.gz
# 1uf5A.t2k.a2m with 572 sequences, total weight= 572 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21751 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uf5A/info/1uf5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uf5A/nostruct-align/1uf5A.t2k.a2m.gz, have 193051 columns in 842 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oqcA/nostruct-align/1oqcA.t2k.a2m.gz
# 1oqcA.t2k.a2m with 64 sequences, total weight= 21.5288 avg weight= 0.336387 35 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oqcA/info/1oqcA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oqcA/nostruct-align/1oqcA.t2k.a2m.gz, have 193163 columns in 843 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2i9iA/nostruct-align/2i9iA.t2k.a2m.gz
# 2i9iA.t2k.a2m with 23 sequences, total weight= 5.90909 avg weight= 0.256917 18 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2i9iA/info/2i9iA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2i9iA/nostruct-align/2i9iA.t2k.a2m.gz, have 193384 columns in 844 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2iyvA/nostruct-align/2iyvA.t2k.a2m.gz
# 2iyvA.t2k.a2m with 2034 sequences, total weight= 2034 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0918 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2iyvA/info/2iyvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2iyvA/nostruct-align/2iyvA.t2k.a2m.gz, have 193563 columns in 845 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ijbA/nostruct-align/1ijbA.t2k.a2m.gz
# 1ijbA.t2k.a2m with 820 sequences, total weight= 792.18 avg weight= 0.966073 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30081 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ijbA/info/1ijbA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1ijbA/nostruct-align/1ijbA.t2k.a2m.gz, have 193765 columns in 846 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o04A/nostruct-align/1o04A.t2k.a2m.gz
# 1o04A.t2k.a2m with 1712 sequences, total weight= 243.836 avg weight= 0.142428 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31427 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o04A/info/1o04A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1o04A/nostruct-align/1o04A.t2k.a2m.gz, have 194259 columns in 847 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cxhA/nostruct-align/2cxhA.t2k.a2m.gz
# 2cxhA.t2k.a2m with 121 sequences, total weight= 23.6093 avg weight= 0.195118 36 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cxhA/info/2cxhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cxhA/nostruct-align/2cxhA.t2k.a2m.gz, have 194439 columns in 848 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lqvA/nostruct-align/1lqvA.t2k.a2m.gz
# 1lqvA.t2k.a2m with 2577 sequences, total weight= 36.1259 avg weight= 0.0140186 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lqvA/info/1lqvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lqvA/nostruct-align/1lqvA.t2k.a2m.gz, have 194611 columns in 849 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dowA/nostruct-align/1dowA.t2k.a2m.gz
# 1dowA.t2k.a2m with 72 sequences, total weight= 12.5156 avg weight= 0.173828 30 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dowA/info/1dowA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dowA/nostruct-align/1dowA.t2k.a2m.gz, have 194816 columns in 850 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2i51A/nostruct-align/2i51A.t2k.a2m.gz
# 2i51A.t2k.a2m with 269 sequences, total weight= 154.999 avg weight= 0.576203 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30182 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2i51A/info/2i51A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2i51A/nostruct-align/2i51A.t2k.a2m.gz, have 195010 columns in 851 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qf8A/nostruct-align/1qf8A.t2k.a2m.gz
# 1qf8A.t2k.a2m with 62 sequences, total weight= 7.08519 avg weight= 0.114277 27 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qf8A/info/1qf8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qf8A/nostruct-align/1qf8A.t2k.a2m.gz, have 195177 columns in 852 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d0cA/nostruct-align/1d0cA.t2k.a2m.gz
# 1d0cA.t2k.a2m with 151 sequences, total weight= 6.07684 avg weight= 0.040244 26 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d0cA/info/1d0cA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1d0cA/nostruct-align/1d0cA.t2k.a2m.gz, have 195593 columns in 853 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bf6A/nostruct-align/2bf6A.t2k.a2m.gz
# 2bf6A.t2k.a2m with 533 sequences, total weight= 533 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0259 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bf6A/info/2bf6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bf6A/nostruct-align/2bf6A.t2k.a2m.gz, have 196041 columns in 854 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rqpA/nostruct-align/1rqpA.t2k.a2m.gz
# 1rqpA.t2k.a2m with 48 sequences, total weight= 16.8147 avg weight= 0.350306 29 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rqpA/info/1rqpA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rqpA/nostruct-align/1rqpA.t2k.a2m.gz, have 196332 columns in 855 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2dsxA/nostruct-align/2dsxA.t2k.a2m.gz
# 2dsxA.t2k.a2m with 454 sequences, total weight= 10.9539 avg weight= 0.0241274 39 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2dsxA/info/2dsxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2dsxA/nostruct-align/2dsxA.t2k.a2m.gz, have 196384 columns in 856 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xjvA/nostruct-align/1xjvA.t2k.a2m.gz
# 1xjvA.t2k.a2m with 49 sequences, total weight= 24.8982 avg weight= 0.508126 27 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xjvA/info/1xjvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xjvA/nostruct-align/1xjvA.t2k.a2m.gz, have 196675 columns in 857 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/4u/4uagA/nostruct-align/4uagA.t2k.a2m.gz
# 4uagA.t2k.a2m with 323 sequences, total weight= 323 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18594 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/4u/4uagA/info/4uagA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/4u/4uagA/nostruct-align/4uagA.t2k.a2m.gz, have 197104 columns in 858 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bklA/nostruct-align/2bklA.t2k.a2m.gz
# 2bklA.t2k.a2m with 688 sequences, total weight= 688 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.936515 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bklA/info/2bklA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bklA/nostruct-align/2bklA.t2k.a2m.gz, have 197780 columns in 859 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wdvA/nostruct-align/1wdvA.t2k.a2m.gz
# 1wdvA.t2k.a2m with 385 sequences, total weight= 189.872 avg weight= 0.493175 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30499 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wdvA/info/1wdvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wdvA/nostruct-align/1wdvA.t2k.a2m.gz, have 197930 columns in 860 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l9xA/nostruct-align/1l9xA.t2k.a2m.gz
# 1l9xA.t2k.a2m with 250 sequences, total weight= 143.144 avg weight= 0.572576 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30052 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l9xA/info/1l9xA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1l9xA/nostruct-align/1l9xA.t2k.a2m.gz, have 198218 columns in 861 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a7s/nostruct-align/1a7s.t2k.a2m.gz
# 1a7s.t2k.a2m with 2813 sequences, total weight= 225.388 avg weight= 0.0801238 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32773 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a7s/info/1a7s.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1a7s/nostruct-align/1a7s.t2k.a2m.gz, have 198439 columns in 862 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n71A/nostruct-align/1n71A.t2k.a2m.gz
# 1n71A.t2k.a2m with 180 sequences, total weight= 176.582 avg weight= 0.981011 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n71A/info/1n71A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1n71A/nostruct-align/1n71A.t2k.a2m.gz, have 198619 columns in 863 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i58A/nostruct-align/1i58A.t2k.a2m.gz
# 1i58A.t2k.a2m with 1087 sequences, total weight= 1087 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26181 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i58A/info/1i58A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1i58A/nostruct-align/1i58A.t2k.a2m.gz, have 198808 columns in 864 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uujA/nostruct-align/1uujA.t2k.a2m.gz
# 1uujA.t2k.a2m with 41 sequences, total weight= 7.94531 avg weight= 0.193788 28 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uujA/info/1uujA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uujA/nostruct-align/1uujA.t2k.a2m.gz, have 198884 columns in 865 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v8yA/nostruct-align/1v8yA.t2k.a2m.gz
# 1v8yA.t2k.a2m with 1553 sequences, total weight= 1553 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07853 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v8yA/info/1v8yA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v8yA/nostruct-align/1v8yA.t2k.a2m.gz, have 199034 columns in 866 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wluA/nostruct-align/1wluA.t2k.a2m.gz
# 1wluA.t2k.a2m with 634 sequences, total weight= 634 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22482 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wluA/info/1wluA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wluA/nostruct-align/1wluA.t2k.a2m.gz, have 199151 columns in 867 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gzqA/nostruct-align/2gzqA.t2k.a2m.gz
# 2gzqA.t2k.a2m with 335 sequences, total weight= 103.911 avg weight= 0.310183 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30108 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gzqA/info/2gzqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gzqA/nostruct-align/2gzqA.t2k.a2m.gz, have 199342 columns in 868 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54I/nostruct-align/1v54I.t2k.a2m.gz
# 1v54I.t2k.a2m with 28 sequences, total weight= 6.06405 avg weight= 0.216573 17 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54I/info/1v54I.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v54I/nostruct-align/1v54I.t2k.a2m.gz, have 199415 columns in 869 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hq6A/nostruct-align/2hq6A.t2k.a2m.gz
# 2hq6A.t2k.a2m with 2189 sequences, total weight= 81.6467 avg weight= 0.0372986 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30093 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hq6A/info/2hq6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hq6A/nostruct-align/2hq6A.t2k.a2m.gz, have 199585 columns in 870 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zn6A/nostruct-align/1zn6A.t2k.a2m.gz
# 1zn6A.t2k.a2m with 152 sequences, total weight= 128.906 avg weight= 0.848068 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zn6A/info/1zn6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zn6A/nostruct-align/1zn6A.t2k.a2m.gz, have 199796 columns in 871 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qs1A/nostruct-align/1qs1A.t2k.a2m.gz
# 1qs1A.t2k.a2m with 57 sequences, total weight= 18.215 avg weight= 0.319562 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qs1A/info/1qs1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qs1A/nostruct-align/1qs1A.t2k.a2m.gz, have 200198 columns in 872 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m9xC/nostruct-align/1m9xC.t2k.a2m.gz
# 1m9xC.t2k.a2m with 6009 sequences, total weight= 15.8283 avg weight= 0.0026341 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m9xC/info/1m9xC.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m9xC/nostruct-align/1m9xC.t2k.a2m.gz, have 200344 columns in 873 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2j6fA/nostruct-align/2j6fA.t2k.a2m.gz
# 2j6fA.t2k.a2m with 4778 sequences, total weight= 62.4032 avg weight= 0.0130605 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30671 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2j6fA/info/2j6fA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2j6fA/nostruct-align/2j6fA.t2k.a2m.gz, have 200401 columns in 874 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p5zB/nostruct-align/1p5zB.t2k.a2m.gz
# 1p5zB.t2k.a2m with 160 sequences, total weight= 160 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22595 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p5zB/info/1p5zB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1p5zB/nostruct-align/1p5zB.t2k.a2m.gz, have 200630 columns in 875 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1khxA/nostruct-align/1khxA.t2k.a2m.gz
# 1khxA.t2k.a2m with 180 sequences, total weight= 13.1189 avg weight= 0.072883 30 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1khxA/info/1khxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1khxA/nostruct-align/1khxA.t2k.a2m.gz, have 200833 columns in 876 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2e/2erxA/nostruct-align/2erxA.t2k.a2m.gz
# 2erxA.t2k.a2m with 5311 sequences, total weight= 1928.33 avg weight= 0.363082 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32942 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2e/2erxA/info/2erxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2e/2erxA/nostruct-align/2erxA.t2k.a2m.gz, have 201001 columns in 877 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2b4hA/nostruct-align/2b4hA.t2k.a2m.gz
# 2b4hA.t2k.a2m with 382 sequences, total weight= 7.4263 avg weight= 0.0194406 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2b4hA/info/2b4hA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2b4hA/nostruct-align/2b4hA.t2k.a2m.gz, have 201228 columns in 878 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yb3A/nostruct-align/1yb3A.t2k.a2m.gz
# 1yb3A.t2k.a2m with 8 sequences, total weight= 5.57825 avg weight= 0.697281 14 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yb3A/info/1yb3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yb3A/nostruct-align/1yb3A.t2k.a2m.gz, have 201394 columns in 879 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uebA/nostruct-align/1uebA.t2k.a2m.gz
# 1uebA.t2k.a2m with 272 sequences, total weight= 21.3003 avg weight= 0.0783099 44 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uebA/info/1uebA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uebA/nostruct-align/1uebA.t2k.a2m.gz, have 201578 columns in 880 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mgtA/nostruct-align/1mgtA.t2k.a2m.gz
# 1mgtA.t2k.a2m with 288 sequences, total weight= 134.205 avg weight= 0.465989 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30213 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mgtA/info/1mgtA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mgtA/nostruct-align/1mgtA.t2k.a2m.gz, have 201747 columns in 881 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2ha8A/nostruct-align/2ha8A.t2k.a2m.gz
# 2ha8A.t2k.a2m with 1488 sequences, total weight= 278.252 avg weight= 0.186997 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32204 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2ha8A/info/2ha8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2ha8A/nostruct-align/2ha8A.t2k.a2m.gz, have 201906 columns in 882 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bd0A/nostruct-align/2bd0A.t2k.a2m.gz
# 2bd0A.t2k.a2m with 10885 sequences, total weight= 9110.7 avg weight= 0.836995 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30587 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bd0A/info/2bd0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bd0A/nostruct-align/2bd0A.t2k.a2m.gz, have 202146 columns in 883 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gxqA/nostruct-align/2gxqA.t2k.a2m.gz
# 2gxqA.t2k.a2m with 5698 sequences, total weight= 2715.52 avg weight= 0.476575 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32371 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gxqA/info/2gxqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gxqA/nostruct-align/2gxqA.t2k.a2m.gz, have 202352 columns in 884 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g6xA/nostruct-align/1g6xA.t2k.a2m.gz
# 1g6xA.t2k.a2m with 411 sequences, total weight= 30.0633 avg weight= 0.0731467 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g6xA/info/1g6xA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1g6xA/nostruct-align/1g6xA.t2k.a2m.gz, have 202410 columns in 885 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x99A/nostruct-align/1x99A.t2k.a2m.gz
# 1x99A.t2k.a2m with 14 sequences, total weight= 4.29869 avg weight= 0.307049 16 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x99A/info/1x99A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1x99A/nostruct-align/1x99A.t2k.a2m.gz, have 202555 columns in 886 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2geyA/nostruct-align/2geyA.t2k.a2m.gz
# 2geyA.t2k.a2m with 272 sequences, total weight= 272 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19241 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2geyA/info/2geyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2geyA/nostruct-align/2geyA.t2k.a2m.gz, have 202712 columns in 887 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mf7A/nostruct-align/1mf7A.t2k.a2m.gz
# 1mf7A.t2k.a2m with 951 sequences, total weight= 951 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2159 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mf7A/info/1mf7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mf7A/nostruct-align/1mf7A.t2k.a2m.gz, have 202906 columns in 888 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hzcA/nostruct-align/2hzcA.t2k.a2m.gz
# 2hzcA.t2k.a2m with 3585 sequences, total weight= 1568.7 avg weight= 0.437572 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32162 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hzcA/info/2hzcA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hzcA/nostruct-align/2hzcA.t2k.a2m.gz, have 202993 columns in 889 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w9sA/nostruct-align/1w9sA.t2k.a2m.gz
# 1w9sA.t2k.a2m with 145 sequences, total weight= 71.1831 avg weight= 0.490918 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w9sA/info/1w9sA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w9sA/nostruct-align/1w9sA.t2k.a2m.gz, have 203127 columns in 890 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sjyA/nostruct-align/1sjyA.t2k.a2m.gz
# 1sjyA.t2k.a2m with 1482 sequences, total weight= 1482 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15303 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sjyA/info/1sjyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1sjyA/nostruct-align/1sjyA.t2k.a2m.gz, have 203281 columns in 891 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2omlA/nostruct-align/2omlA.t2k.a2m.gz
# 2omlA.t2k.a2m with 1898 sequences, total weight= 493.507 avg weight= 0.260014 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3313 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2omlA/info/2omlA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2omlA/nostruct-align/2omlA.t2k.a2m.gz, have 203462 columns in 892 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zs9A/nostruct-align/1zs9A.t2k.a2m.gz
# 1zs9A.t2k.a2m with 128 sequences, total weight= 128 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29396 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zs9A/info/1zs9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zs9A/nostruct-align/1zs9A.t2k.a2m.gz, have 203715 columns in 893 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2jdaA/nostruct-align/2jdaA.t2k.a2m.gz
# 2jdaA.t2k.a2m with 571 sequences, total weight= 571 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21433 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2jdaA/info/2jdaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2jdaA/nostruct-align/2jdaA.t2k.a2m.gz, have 203854 columns in 894 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x38A/nostruct-align/1x38A.t2k.a2m.gz
# 1x38A.t2k.a2m with 834 sequences, total weight= 834 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24956 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x38A/info/1x38A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1x38A/nostruct-align/1x38A.t2k.a2m.gz, have 204456 columns in 895 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nkgA/nostruct-align/1nkgA.t2k.a2m.gz
# 1nkgA.t2k.a2m with 32 sequences, total weight= 14.2009 avg weight= 0.443779 23 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nkgA/info/1nkgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nkgA/nostruct-align/1nkgA.t2k.a2m.gz, have 204964 columns in 896 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y80A/nostruct-align/1y80A.t2k.a2m.gz
# 1y80A.t2k.a2m with 409 sequences, total weight= 55.7244 avg weight= 0.136246 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3007 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y80A/info/1y80A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1y80A/nostruct-align/1y80A.t2k.a2m.gz, have 205089 columns in 897 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2ivyA/nostruct-align/2ivyA.t2k.a2m.gz
# 2ivyA.t2k.a2m with 57 sequences, total weight= 27.9299 avg weight= 0.489999 42 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2ivyA/info/2ivyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2ivyA/nostruct-align/2ivyA.t2k.a2m.gz, have 205177 columns in 898 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1ng6A/nostruct-align/1ng6A.t2k.a2m.gz
# 1ng6A.t2k.a2m with 86 sequences, total weight= 21.3055 avg weight= 0.247738 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1ng6A/info/1ng6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1ng6A/nostruct-align/1ng6A.t2k.a2m.gz, have 205325 columns in 899 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1ftrA/nostruct-align/1ftrA.t2k.a2m.gz
# 1ftrA.t2k.a2m with 25 sequences, total weight= 4.5678 avg weight= 0.182712 20 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1ftrA/info/1ftrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1ftrA/nostruct-align/1ftrA.t2k.a2m.gz, have 205621 columns in 900 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ybkA/nostruct-align/1ybkA.t2k.a2m.gz
# 1ybkA.t2k.a2m with 6 sequences, total weight= 1.92688 avg weight= 0.321147 9 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ybkA/info/1ybkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1ybkA/nostruct-align/1ybkA.t2k.a2m.gz, have 205673 columns in 901 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nc5A/nostruct-align/1nc5A.t2k.a2m.gz
# 1nc5A.t2k.a2m with 33 sequences, total weight= 25.0443 avg weight= 0.758918 30 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nc5A/info/1nc5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nc5A/nostruct-align/1nc5A.t2k.a2m.gz, have 206036 columns in 902 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tkjA/nostruct-align/1tkjA.t2k.a2m.gz
# 1tkjA.t2k.a2m with 592 sequences, total weight= 592 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.960729 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tkjA/info/1tkjA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tkjA/nostruct-align/1tkjA.t2k.a2m.gz, have 206313 columns in 903 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nxcA/nostruct-align/1nxcA.t2k.a2m.gz
# 1nxcA.t2k.a2m with 169 sequences, total weight= 26.0822 avg weight= 0.154333 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nxcA/info/1nxcA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nxcA/nostruct-align/1nxcA.t2k.a2m.gz, have 206780 columns in 904 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2icjA/nostruct-align/2icjA.t2k.a2m.gz
# 2icjA.t2k.a2m with 389 sequences, total weight= 87.7576 avg weight= 0.225598 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30037 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2icjA/info/2icjA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2icjA/nostruct-align/2icjA.t2k.a2m.gz, have 206999 columns in 905 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g8mA/nostruct-align/1g8mA.t2k.a2m.gz
# 1g8mA.t2k.a2m with 201 sequences, total weight= 13.2019 avg weight= 0.0656812 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g8mA/info/1g8mA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1g8mA/nostruct-align/1g8mA.t2k.a2m.gz, have 207589 columns in 906 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hy5A/nostruct-align/2hy5A.t2k.a2m.gz
# 2hy5A.t2k.a2m with 122 sequences, total weight= 25.0527 avg weight= 0.20535 43 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hy5A/info/2hy5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hy5A/nostruct-align/2hy5A.t2k.a2m.gz, have 207719 columns in 907 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iqqA/nostruct-align/1iqqA.t2k.a2m.gz
# 1iqqA.t2k.a2m with 339 sequences, total weight= 76.1217 avg weight= 0.224548 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30091 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iqqA/info/1iqqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1iqqA/nostruct-align/1iqqA.t2k.a2m.gz, have 207919 columns in 908 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t3yA/nostruct-align/1t3yA.t2k.a2m.gz
# 1t3yA.t2k.a2m with 137 sequences, total weight= 63.2878 avg weight= 0.461955 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t3yA/info/1t3yA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1t3yA/nostruct-align/1t3yA.t2k.a2m.gz, have 208050 columns in 909 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jnrB/nostruct-align/1jnrB.t2k.a2m.gz
# 1jnrB.t2k.a2m with 748 sequences, total weight= 748 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15031 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jnrB/info/1jnrB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jnrB/nostruct-align/1jnrB.t2k.a2m.gz, have 208199 columns in 910 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2ozhA/nostruct-align/2ozhA.t2k.a2m.gz
# 2ozhA.t2k.a2m with 2143 sequences, total weight= 2143 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00934 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2ozhA/info/2ozhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2ozhA/nostruct-align/2ozhA.t2k.a2m.gz, have 208341 columns in 911 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gskA/nostruct-align/1gskA.t2k.a2m.gz
# 1gskA.t2k.a2m with 369 sequences, total weight= 369 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22304 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gskA/info/1gskA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gskA/nostruct-align/1gskA.t2k.a2m.gz, have 208843 columns in 912 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j1bA/nostruct-align/1j1bA.t2k.a2m.gz
# 1j1bA.t2k.a2m with 13619 sequences, total weight= 13619 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06668 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j1bA/info/1j1bA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1j1bA/nostruct-align/1j1bA.t2k.a2m.gz, have 209197 columns in 913 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j3aA/nostruct-align/1j3aA.t2k.a2m.gz
# 1j3aA.t2k.a2m with 197 sequences, total weight= 32.5462 avg weight= 0.165209 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j3aA/info/1j3aA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1j3aA/nostruct-align/1j3aA.t2k.a2m.gz, have 209326 columns in 914 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i27A/nostruct-align/1i27A.t2k.a2m.gz
# 1i27A.t2k.a2m with 15 sequences, total weight= 3.45942 avg weight= 0.230628 13 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i27A/info/1i27A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1i27A/nostruct-align/1i27A.t2k.a2m.gz, have 209399 columns in 915 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dgwA/nostruct-align/1dgwA.t2k.a2m.gz
# 1dgwA.t2k.a2m with 367 sequences, total weight= 89.0848 avg weight= 0.242738 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30162 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dgwA/info/1dgwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dgwA/nostruct-align/1dgwA.t2k.a2m.gz, have 209577 columns in 916 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2e/2ez9A/nostruct-align/2ez9A.t2k.a2m.gz
# 2ez9A.t2k.a2m with 2113 sequences, total weight= 2113 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27626 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2e/2ez9A/info/2ez9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2e/2ez9A/nostruct-align/2ez9A.t2k.a2m.gz, have 210162 columns in 917 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1owlA/nostruct-align/1owlA.t2k.a2m.gz
# 1owlA.t2k.a2m with 1469 sequences, total weight= 1209.34 avg weight= 0.823237 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3041 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1owlA/info/1owlA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1owlA/nostruct-align/1owlA.t2k.a2m.gz, have 210635 columns in 918 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2e/2etvA/nostruct-align/2etvA.t2k.a2m.gz
# 2etvA.t2k.a2m with 582 sequences, total weight= 582 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15288 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2e/2etvA/info/2etvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2e/2etvA/nostruct-align/2etvA.t2k.a2m.gz, have 210976 columns in 919 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rrmA/nostruct-align/1rrmA.t2k.a2m.gz
# 1rrmA.t2k.a2m with 596 sequences, total weight= 404.714 avg weight= 0.679051 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30613 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rrmA/info/1rrmA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rrmA/nostruct-align/1rrmA.t2k.a2m.gz, have 211361 columns in 920 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qsaA/nostruct-align/1qsaA.t2k.a2m.gz
# 1qsaA.t2k.a2m with 357 sequences, total weight= 357 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16394 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qsaA/info/1qsaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qsaA/nostruct-align/1qsaA.t2k.a2m.gz, have 211979 columns in 921 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ohlA/nostruct-align/1ohlA.t2k.a2m.gz
# 1ohlA.t2k.a2m with 182 sequences, total weight= 8.97632 avg weight= 0.0493204 32 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ohlA/info/1ohlA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1ohlA/nostruct-align/1ohlA.t2k.a2m.gz, have 212319 columns in 922 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1khcA/nostruct-align/1khcA.t2k.a2m.gz
# 1khcA.t2k.a2m with 190 sequences, total weight= 90.6539 avg weight= 0.477126 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30033 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1khcA/info/1khcA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1khcA/nostruct-align/1khcA.t2k.a2m.gz, have 212454 columns in 923 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y4tA/nostruct-align/1y4tA.t2k.a2m.gz
# 1y4tA.t2k.a2m with 869 sequences, total weight= 869 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.977448 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y4tA/info/1y4tA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1y4tA/nostruct-align/1y4tA.t2k.a2m.gz, have 212771 columns in 924 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b2pA/nostruct-align/1b2pA.t2k.a2m.gz
# 1b2pA.t2k.a2m with 249 sequences, total weight= 39.2513 avg weight= 0.157636 43 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b2pA/info/1b2pA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1b2pA/nostruct-align/1b2pA.t2k.a2m.gz, have 212890 columns in 925 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1z3xA/nostruct-align/1z3xA.t2k.a2m.gz
# 1z3xA.t2k.a2m with 54 sequences, total weight= 54 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25017 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1z3xA/info/1z3xA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1z3xA/nostruct-align/1z3xA.t2k.a2m.gz, have 213126 columns in 926 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wpuA/nostruct-align/1wpuA.t2k.a2m.gz
# 1wpuA.t2k.a2m with 12 sequences, total weight= 4.59805 avg weight= 0.383171 16 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wpuA/info/1wpuA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wpuA/nostruct-align/1wpuA.t2k.a2m.gz, have 213273 columns in 927 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3g/3grs/nostruct-align/3grs.t2k.a2m.gz
# 3grs.t2k.a2m with 1255 sequences, total weight= 1255 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08006 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3g/3grs/info/3grs.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/3g/3grs/nostruct-align/3grs.t2k.a2m.gz, have 213734 columns in 928 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yj7A/nostruct-align/1yj7A.t2k.a2m.gz
# 1yj7A.t2k.a2m with 220 sequences, total weight= 36.5244 avg weight= 0.16602 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yj7A/info/1yj7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yj7A/nostruct-align/1yj7A.t2k.a2m.gz, have 213888 columns in 929 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tca/nostruct-align/1tca.t2k.a2m.gz
# 1tca.t2k.a2m with 72 sequences, total weight= 70.1994 avg weight= 0.974991 26 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tca/info/1tca.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tca/nostruct-align/1tca.t2k.a2m.gz, have 214205 columns in 930 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lugA/nostruct-align/1lugA.t2k.a2m.gz
# 1lugA.t2k.a2m with 388 sequences, total weight= 75.9039 avg weight= 0.195629 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30164 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lugA/info/1lugA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lugA/nostruct-align/1lugA.t2k.a2m.gz, have 214464 columns in 931 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vr7A/nostruct-align/1vr7A.t2k.a2m.gz
# 1vr7A.t2k.a2m with 113 sequences, total weight= 16.088 avg weight= 0.142372 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vr7A/info/1vr7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vr7A/nostruct-align/1vr7A.t2k.a2m.gz, have 214584 columns in 932 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1behA/nostruct-align/1behA.t2k.a2m.gz
# 1behA.t2k.a2m with 198 sequences, total weight= 56.1505 avg weight= 0.283588 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1behA/info/1behA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1behA/nostruct-align/1behA.t2k.a2m.gz, have 214768 columns in 933 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2a6sA/nostruct-align/2a6sA.t2k.a2m.gz
# 2a6sA.t2k.a2m with 92 sequences, total weight= 18.1622 avg weight= 0.197415 35 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2a6sA/info/2a6sA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2a6sA/nostruct-align/2a6sA.t2k.a2m.gz, have 214851 columns in 934 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oaiA/nostruct-align/1oaiA.t2k.a2m.gz
# 1oaiA.t2k.a2m with 28 sequences, total weight= 6.66849 avg weight= 0.23816 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oaiA/info/1oaiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oaiA/nostruct-align/1oaiA.t2k.a2m.gz, have 214910 columns in 935 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2aefA/nostruct-align/2aefA.t2k.a2m.gz
# 2aefA.t2k.a2m with 566 sequences, total weight= 566 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08396 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2aefA/info/2aefA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2aefA/nostruct-align/2aefA.t2k.a2m.gz, have 215131 columns in 936 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2i9xA/nostruct-align/2i9xA.t2k.a2m.gz
# 2i9xA.t2k.a2m with 65 sequences, total weight= 6.54236 avg weight= 0.100652 26 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2i9xA/info/2i9xA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2i9xA/nostruct-align/2i9xA.t2k.a2m.gz, have 215217 columns in 937 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gasA/nostruct-align/2gasA.t2k.a2m.gz
# 2gasA.t2k.a2m with 1244 sequences, total weight= 1244 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.888691 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gasA/info/2gasA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gasA/nostruct-align/2gasA.t2k.a2m.gz, have 215524 columns in 938 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ypfA/nostruct-align/1ypfA.t2k.a2m.gz
# 1ypfA.t2k.a2m with 1471 sequences, total weight= 1471 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15854 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ypfA/info/1ypfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1ypfA/nostruct-align/1ypfA.t2k.a2m.gz, have 215819 columns in 939 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sgwA/nostruct-align/1sgwA.t2k.a2m.gz
# 1sgwA.t2k.a2m with 19130 sequences, total weight= 15157 avg weight= 0.792318 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3081 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sgwA/info/1sgwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1sgwA/nostruct-align/1sgwA.t2k.a2m.gz, have 216019 columns in 940 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t1gA/nostruct-align/1t1gA.t2k.a2m.gz
# 1t1gA.t2k.a2m with 348 sequences, total weight= 348 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22454 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t1gA/info/1t1gA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1t1gA/nostruct-align/1t1gA.t2k.a2m.gz, have 216376 columns in 941 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2c31A/nostruct-align/2c31A.t2k.a2m.gz
# 2c31A.t2k.a2m with 1658 sequences, total weight= 1658 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20844 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2c31A/info/2c31A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2c31A/nostruct-align/2c31A.t2k.a2m.gz, have 216922 columns in 942 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nkiA/nostruct-align/1nkiA.t2k.a2m.gz
# 1nkiA.t2k.a2m with 775 sequences, total weight= 775 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09592 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nkiA/info/1nkiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nkiA/nostruct-align/1nkiA.t2k.a2m.gz, have 217056 columns in 943 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v58A/nostruct-align/1v58A.t2k.a2m.gz
# 1v58A.t2k.a2m with 173 sequences, total weight= 173 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22155 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v58A/info/1v58A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v58A/nostruct-align/1v58A.t2k.a2m.gz, have 217285 columns in 944 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rv9A/nostruct-align/1rv9A.t2k.a2m.gz
# 1rv9A.t2k.a2m with 178 sequences, total weight= 35.3531 avg weight= 0.198613 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rv9A/info/1rv9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rv9A/nostruct-align/1rv9A.t2k.a2m.gz, have 217527 columns in 945 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u4gA/nostruct-align/1u4gA.t2k.a2m.gz
# 1u4gA.t2k.a2m with 215 sequences, total weight= 48.1955 avg weight= 0.224165 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u4gA/info/1u4gA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1u4gA/nostruct-align/1u4gA.t2k.a2m.gz, have 217825 columns in 946 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2dyuA/nostruct-align/2dyuA.t2k.a2m.gz
# 2dyuA.t2k.a2m with 1456 sequences, total weight= 1456 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2268 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2dyuA/info/2dyuA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2dyuA/nostruct-align/2dyuA.t2k.a2m.gz, have 218147 columns in 947 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jsdB/nostruct-align/1jsdB.t2k.a2m.gz
# 1jsdB.t2k.a2m with 616 sequences, total weight= 4.17816 avg weight= 0.00678273 23 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jsdB/info/1jsdB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jsdB/nostruct-align/1jsdB.t2k.a2m.gz, have 218307 columns in 948 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2c4wA/nostruct-align/2c4wA.t2k.a2m.gz
# 2c4wA.t2k.a2m with 376 sequences, total weight= 11.2736 avg weight= 0.029983 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2c4wA/info/2c4wA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2c4wA/nostruct-align/2c4wA.t2k.a2m.gz, have 218475 columns in 949 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2ghcX/nostruct-align/2ghcX.t2k.a2m.gz
# 2ghcX.t2k.a2m with 1922 sequences, total weight= 136.739 avg weight= 0.0711441 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31798 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2ghcX/info/2ghcX.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2ghcX/nostruct-align/2ghcX.t2k.a2m.gz, have 218724 columns in 950 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2ioiA/nostruct-align/2ioiA.t2k.a2m.gz
# 2ioiA.t2k.a2m with 328 sequences, total weight= 12.2445 avg weight= 0.0373307 32 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2ioiA/info/2ioiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2ioiA/nostruct-align/2ioiA.t2k.a2m.gz, have 218911 columns in 951 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2aalA/nostruct-align/2aalA.t2k.a2m.gz
# 2aalA.t2k.a2m with 75 sequences, total weight= 33.7539 avg weight= 0.450052 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2aalA/info/2aalA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2aalA/nostruct-align/2aalA.t2k.a2m.gz, have 219040 columns in 952 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zruA/nostruct-align/1zruA.t2k.a2m.gz
# 1zruA.t2k.a2m with 22 sequences, total weight= 9.08284 avg weight= 0.412856 18 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zruA/info/1zruA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zruA/nostruct-align/1zruA.t2k.a2m.gz, have 219293 columns in 953 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s5aA/nostruct-align/1s5aA.t2k.a2m.gz
# 1s5aA.t2k.a2m with 60 sequences, total weight= 60 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1641 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s5aA/info/1s5aA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1s5aA/nostruct-align/1s5aA.t2k.a2m.gz, have 219432 columns in 954 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h1nA/nostruct-align/1h1nA.t2k.a2m.gz
# 1h1nA.t2k.a2m with 230 sequences, total weight= 230 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19167 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h1nA/info/1h1nA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h1nA/nostruct-align/1h1nA.t2k.a2m.gz, have 219737 columns in 955 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gpiA/nostruct-align/1gpiA.t2k.a2m.gz
# 1gpiA.t2k.a2m with 101 sequences, total weight= 6.85876 avg weight= 0.0679085 26 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gpiA/info/1gpiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gpiA/nostruct-align/1gpiA.t2k.a2m.gz, have 220168 columns in 956 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rjuV/nostruct-align/1rjuV.t2k.a2m.gz
# 1rjuV.t2k.a2m with 5 sequences, total weight= 1.5549 avg weight= 0.31098 12 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rjuV/info/1rjuV.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rjuV/nostruct-align/1rjuV.t2k.a2m.gz, have 220204 columns in 957 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2dbyA/nostruct-align/2dbyA.t2k.a2m.gz
# 2dbyA.t2k.a2m with 1534 sequences, total weight= 171.308 avg weight= 0.111674 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31149 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2dbyA/info/2dbyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2dbyA/nostruct-align/2dbyA.t2k.a2m.gz, have 220559 columns in 958 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u84A/nostruct-align/1u84A.t2k.a2m.gz
# 1u84A.t2k.a2m with 18 sequences, total weight= 5.52057 avg weight= 0.306699 20 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u84A/info/1u84A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1u84A/nostruct-align/1u84A.t2k.a2m.gz, have 220640 columns in 959 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hxn/nostruct-align/1hxn.t2k.a2m.gz
# 1hxn.t2k.a2m with 305 sequences, total weight= 57.7019 avg weight= 0.189187 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30033 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hxn/info/1hxn.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hxn/nostruct-align/1hxn.t2k.a2m.gz, have 220850 columns in 960 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2afwA/nostruct-align/2afwA.t2k.a2m.gz
# 2afwA.t2k.a2m with 156 sequences, total weight= 156 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13964 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2afwA/info/2afwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2afwA/nostruct-align/2afwA.t2k.a2m.gz, have 221173 columns in 961 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tr9A/nostruct-align/1tr9A.t2k.a2m.gz
# 1tr9A.t2k.a2m with 474 sequences, total weight= 154.264 avg weight= 0.325452 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30424 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tr9A/info/1tr9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tr9A/nostruct-align/1tr9A.t2k.a2m.gz, have 221503 columns in 962 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yoeA/nostruct-align/1yoeA.t2k.a2m.gz
# 1yoeA.t2k.a2m with 474 sequences, total weight= 474 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29564 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yoeA/info/1yoeA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yoeA/nostruct-align/1yoeA.t2k.a2m.gz, have 221805 columns in 963 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2oxcA/nostruct-align/2oxcA.t2k.a2m.gz
# 2oxcA.t2k.a2m with 5730 sequences, total weight= 171.462 avg weight= 0.0299236 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.34052 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2oxcA/info/2oxcA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2oxcA/nostruct-align/2oxcA.t2k.a2m.gz, have 222010 columns in 964 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2je6B/nostruct-align/2je6B.t2k.a2m.gz
# 2je6B.t2k.a2m with 2043 sequences, total weight= 875.828 avg weight= 0.428697 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32022 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2je6B/info/2je6B.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2je6B/nostruct-align/2je6B.t2k.a2m.gz, have 222244 columns in 965 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t8hA/nostruct-align/1t8hA.t2k.a2m.gz
# 1t8hA.t2k.a2m with 162 sequences, total weight= 53.6592 avg weight= 0.33123 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t8hA/info/1t8hA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1t8hA/nostruct-align/1t8hA.t2k.a2m.gz, have 222516 columns in 966 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qo7A/nostruct-align/1qo7A.t2k.a2m.gz
# 1qo7A.t2k.a2m with 222 sequences, total weight= 222 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18712 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qo7A/info/1qo7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qo7A/nostruct-align/1qo7A.t2k.a2m.gz, have 222901 columns in 967 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j30A/nostruct-align/1j30A.t2k.a2m.gz
# 1j30A.t2k.a2m with 117 sequences, total weight= 93.8067 avg weight= 0.801766 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j30A/info/1j30A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1j30A/nostruct-align/1j30A.t2k.a2m.gz, have 223042 columns in 968 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nzjA/nostruct-align/1nzjA.t2k.a2m.gz
# 1nzjA.t2k.a2m with 1180 sequences, total weight= 44.0979 avg weight= 0.0373711 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nzjA/info/1nzjA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nzjA/nostruct-align/1nzjA.t2k.a2m.gz, have 223315 columns in 969 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2iwaA/nostruct-align/2iwaA.t2k.a2m.gz
# 2iwaA.t2k.a2m with 79 sequences, total weight= 18.1624 avg weight= 0.229904 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2iwaA/info/2iwaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2iwaA/nostruct-align/2iwaA.t2k.a2m.gz, have 223569 columns in 970 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vimA/nostruct-align/1vimA.t2k.a2m.gz
# 1vimA.t2k.a2m with 875 sequences, total weight= 875 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15334 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vimA/info/1vimA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vimA/nostruct-align/1vimA.t2k.a2m.gz, have 223761 columns in 971 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m65A/nostruct-align/1m65A.t2k.a2m.gz
# 1m65A.t2k.a2m with 151 sequences, total weight= 151 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19472 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m65A/info/1m65A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m65A/nostruct-align/1m65A.t2k.a2m.gz, have 223995 columns in 972 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1z6eB/nostruct-align/1z6eB.t2k.a2m.gz
# 1z6eB.t2k.a2m with 207 sequences, total weight= 8.47151 avg weight= 0.0409252 41 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1z6eB/info/1z6eB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1z6eB/nostruct-align/1z6eB.t2k.a2m.gz, have 224047 columns in 973 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u7gA/nostruct-align/1u7gA.t2k.a2m.gz
# 1u7gA.t2k.a2m with 575 sequences, total weight= 56.6711 avg weight= 0.0985584 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30075 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u7gA/info/1u7gA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1u7gA/nostruct-align/1u7gA.t2k.a2m.gz, have 224430 columns in 974 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kaeA/nostruct-align/1kaeA.t2k.a2m.gz
# 1kaeA.t2k.a2m with 183 sequences, total weight= 13.3332 avg weight= 0.0728588 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kaeA/info/1kaeA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kaeA/nostruct-align/1kaeA.t2k.a2m.gz, have 224864 columns in 975 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t0aA/nostruct-align/1t0aA.t2k.a2m.gz
# 1t0aA.t2k.a2m with 192 sequences, total weight= 11.207 avg weight= 0.0583697 35 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t0aA/info/1t0aA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1t0aA/nostruct-align/1t0aA.t2k.a2m.gz, have 225022 columns in 976 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g8aA/nostruct-align/1g8aA.t2k.a2m.gz
# 1g8aA.t2k.a2m with 271 sequences, total weight= 271 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2687 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g8aA/info/1g8aA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1g8aA/nostruct-align/1g8aA.t2k.a2m.gz, have 225249 columns in 977 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a1iA/nostruct-align/1a1iA.t2k.a2m.gz
# 1a1iA.t2k.a2m with 12139 sequences, total weight= 214.187 avg weight= 0.0176445 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.34373 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a1iA/info/1a1iA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1a1iA/nostruct-align/1a1iA.t2k.a2m.gz, have 225334 columns in 978 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2g5rA/nostruct-align/2g5rA.t2k.a2m.gz
# 2g5rA.t2k.a2m with 1326 sequences, total weight= 1326 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21878 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2g5rA/info/2g5rA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2g5rA/nostruct-align/2g5rA.t2k.a2m.gz, have 225448 columns in 979 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gmsA/nostruct-align/2gmsA.t2k.a2m.gz
# 2gmsA.t2k.a2m with 2088 sequences, total weight= 2088 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00253 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gmsA/info/2gmsA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gmsA/nostruct-align/2gmsA.t2k.a2m.gz, have 225838 columns in 980 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ej8A/nostruct-align/1ej8A.t2k.a2m.gz
# 1ej8A.t2k.a2m with 151 sequences, total weight= 17.758 avg weight= 0.117603 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ej8A/info/1ej8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1ej8A/nostruct-align/1ej8A.t2k.a2m.gz, have 225978 columns in 981 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2ap3A/nostruct-align/2ap3A.t2k.a2m.gz
# 2ap3A.t2k.a2m with 27 sequences, total weight= 11.8324 avg weight= 0.438237 24 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2ap3A/info/2ap3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2ap3A/nostruct-align/2ap3A.t2k.a2m.gz, have 226170 columns in 982 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2agkA/nostruct-align/2agkA.t2k.a2m.gz
# 2agkA.t2k.a2m with 227 sequences, total weight= 32.8217 avg weight= 0.144589 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2agkA/info/2agkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2agkA/nostruct-align/2agkA.t2k.a2m.gz, have 226403 columns in 983 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2b69A/nostruct-align/2b69A.t2k.a2m.gz
# 2b69A.t2k.a2m with 4797 sequences, total weight= 4797 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.996864 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2b69A/info/2b69A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2b69A/nostruct-align/2b69A.t2k.a2m.gz, have 226715 columns in 984 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nw2B/nostruct-align/2nw2B.t2k.a2m.gz
# 2nw2B.t2k.a2m with 21116 sequences, total weight= 10717.6 avg weight= 0.507559 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32295 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nw2B/info/2nw2B.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2n/2nw2B/nostruct-align/2nw2B.t2k.a2m.gz, have 226958 columns in 985 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vzoA/nostruct-align/1vzoA.t2k.a2m.gz
# 1vzoA.t2k.a2m with 15978 sequences, total weight= 15978 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14143 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vzoA/info/1vzoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vzoA/nostruct-align/1vzoA.t2k.a2m.gz, have 227277 columns in 986 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gpiA/nostruct-align/2gpiA.t2k.a2m.gz
# 2gpiA.t2k.a2m with 46 sequences, total weight= 14.0585 avg weight= 0.305621 32 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gpiA/info/2gpiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gpiA/nostruct-align/2gpiA.t2k.a2m.gz, have 227368 columns in 987 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2g50A/nostruct-align/2g50A.t2k.a2m.gz
# 2g50A.t2k.a2m with 950 sequences, total weight= 52.3188 avg weight= 0.0550724 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30075 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2g50A/info/2g50A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2g50A/nostruct-align/2g50A.t2k.a2m.gz, have 227887 columns in 988 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s99A/nostruct-align/1s99A.t2k.a2m.gz
# 1s99A.t2k.a2m with 15 sequences, total weight= 7.71626 avg weight= 0.514418 19 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s99A/info/1s99A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1s99A/nostruct-align/1s99A.t2k.a2m.gz, have 228073 columns in 989 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w6uA/nostruct-align/1w6uA.t2k.a2m.gz
# 1w6uA.t2k.a2m with 7158 sequences, total weight= 1015.41 avg weight= 0.141857 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.34067 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w6uA/info/1w6uA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w6uA/nostruct-align/1w6uA.t2k.a2m.gz, have 228361 columns in 990 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1itxA/nostruct-align/1itxA.t2k.a2m.gz
# 1itxA.t2k.a2m with 517 sequences, total weight= 517 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.205 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1itxA/info/1itxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1itxA/nostruct-align/1itxA.t2k.a2m.gz, have 228780 columns in 991 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o97D/nostruct-align/1o97D.t2k.a2m.gz
# 1o97D.t2k.a2m with 188 sequences, total weight= 29.1973 avg weight= 0.155305 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o97D/info/1o97D.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1o97D/nostruct-align/1o97D.t2k.a2m.gz, have 229095 columns in 992 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xauA/nostruct-align/1xauA.t2k.a2m.gz
# 1xauA.t2k.a2m with 28 sequences, total weight= 4.10568 avg weight= 0.146631 16 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xauA/info/1xauA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xauA/nostruct-align/1xauA.t2k.a2m.gz, have 229199 columns in 993 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pfbA/nostruct-align/1pfbA.t2k.a2m.gz
# 1pfbA.t2k.a2m with 205 sequences, total weight= 24.1322 avg weight= 0.117718 42 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pfbA/info/1pfbA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pfbA/nostruct-align/1pfbA.t2k.a2m.gz, have 229254 columns in 994 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rjdA/nostruct-align/1rjdA.t2k.a2m.gz
# 1rjdA.t2k.a2m with 61 sequences, total weight= 42.7449 avg weight= 0.700735 36 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rjdA/info/1rjdA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rjdA/nostruct-align/1rjdA.t2k.a2m.gz, have 229582 columns in 995 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vhwA/nostruct-align/1vhwA.t2k.a2m.gz
# 1vhwA.t2k.a2m with 318 sequences, total weight= 314.449 avg weight= 0.988834 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vhwA/info/1vhwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vhwA/nostruct-align/1vhwA.t2k.a2m.gz, have 229819 columns in 996 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rylA/nostruct-align/1rylA.t2k.a2m.gz
# 1rylA.t2k.a2m with 15 sequences, total weight= 12.1302 avg weight= 0.808678 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rylA/info/1rylA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rylA/nostruct-align/1rylA.t2k.a2m.gz, have 229976 columns in 997 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2abwA/nostruct-align/2abwA.t2k.a2m.gz
# 2abwA.t2k.a2m with 295 sequences, total weight= 295 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26227 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2abwA/info/2abwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2abwA/nostruct-align/2abwA.t2k.a2m.gz, have 230192 columns in 998 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zzkA/nostruct-align/1zzkA.t2k.a2m.gz
# 1zzkA.t2k.a2m with 1466 sequences, total weight= 155.641 avg weight= 0.106167 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30968 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zzkA/info/1zzkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zzkA/nostruct-align/1zzkA.t2k.a2m.gz, have 230272 columns in 999 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xrtA/nostruct-align/1xrtA.t2k.a2m.gz
# 1xrtA.t2k.a2m with 2134 sequences, total weight= 2134 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.885627 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xrtA/info/1xrtA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xrtA/nostruct-align/1xrtA.t2k.a2m.gz, have 230641 columns in 1000 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1ka1A/nostruct-align/1ka1A.t2k.a2m.gz
# 1ka1A.t2k.a2m with 450 sequences, total weight= 450 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20479 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1ka1A/info/1ka1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1ka1A/nostruct-align/1ka1A.t2k.a2m.gz, have 230995 columns in 1001 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xkpA/nostruct-align/1xkpA.t2k.a2m.gz
# 1xkpA.t2k.a2m with 65 sequences, total weight= 20.5126 avg weight= 0.315578 31 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xkpA/info/1xkpA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xkpA/nostruct-align/1xkpA.t2k.a2m.gz, have 231226 columns in 1002 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2aiqA/nostruct-align/2aiqA.t2k.a2m.gz
# 2aiqA.t2k.a2m with 4601 sequences, total weight= 1382.9 avg weight= 0.300565 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.33219 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2aiqA/info/2aiqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2aiqA/nostruct-align/2aiqA.t2k.a2m.gz, have 231457 columns in 1003 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r89A/nostruct-align/1r89A.t2k.a2m.gz
# 1r89A.t2k.a2m with 23 sequences, total weight= 11.5289 avg weight= 0.501258 27 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r89A/info/1r89A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r89A/nostruct-align/1r89A.t2k.a2m.gz, have 231894 columns in 1004 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pq1A/nostruct-align/1pq1A.t2k.a2m.gz
# 1pq1A.t2k.a2m with 198 sequences, total weight= 56.6937 avg weight= 0.286332 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30038 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pq1A/info/1pq1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pq1A/nostruct-align/1pq1A.t2k.a2m.gz, have 232041 columns in 1005 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ejdA/nostruct-align/1ejdA.t2k.a2m.gz
# 1ejdA.t2k.a2m with 457 sequences, total weight= 58.5313 avg weight= 0.128077 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30115 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ejdA/info/1ejdA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1ejdA/nostruct-align/1ejdA.t2k.a2m.gz, have 232460 columns in 1006 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wmhA/nostruct-align/1wmhA.t2k.a2m.gz
# 1wmhA.t2k.a2m with 38 sequences, total weight= 3.96661 avg weight= 0.104385 18 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wmhA/info/1wmhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wmhA/nostruct-align/1wmhA.t2k.a2m.gz, have 232543 columns in 1007 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1md6A/nostruct-align/1md6A.t2k.a2m.gz
# 1md6A.t2k.a2m with 135 sequences, total weight= 21.0129 avg weight= 0.155651 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1md6A/info/1md6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1md6A/nostruct-align/1md6A.t2k.a2m.gz, have 232697 columns in 1008 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j34C/nostruct-align/1j34C.t2k.a2m.gz
# 1j34C.t2k.a2m with 158 sequences, total weight= 4.29863 avg weight= 0.0272065 22 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j34C/info/1j34C.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1j34C/nostruct-align/1j34C.t2k.a2m.gz, have 232743 columns in 1009 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cf7A/nostruct-align/2cf7A.t2k.a2m.gz
# 2cf7A.t2k.a2m with 525 sequences, total weight= 187.653 avg weight= 0.357435 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30504 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cf7A/info/2cf7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cf7A/nostruct-align/2cf7A.t2k.a2m.gz, have 232899 columns in 1010 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1upqA/nostruct-align/1upqA.t2k.a2m.gz
# 1upqA.t2k.a2m with 1322 sequences, total weight= 1322 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22116 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1upqA/info/1upqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1upqA/nostruct-align/1upqA.t2k.a2m.gz, have 233006 columns in 1011 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g2bA/nostruct-align/1g2bA.t2k.a2m.gz
# 1g2bA.t2k.a2m with 1760 sequences, total weight= 83.4844 avg weight= 0.0474343 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g2bA/info/1g2bA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1g2bA/nostruct-align/1g2bA.t2k.a2m.gz, have 233068 columns in 1012 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2ao3A/nostruct-align/2ao3A.t2k.a2m.gz
# 2ao3A.t2k.a2m with 174 sequences, total weight= 174 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2831 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2ao3A/info/2ao3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2ao3A/nostruct-align/2ao3A.t2k.a2m.gz, have 233198 columns in 1013 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2h1vA/nostruct-align/2h1vA.t2k.a2m.gz
# 2h1vA.t2k.a2m with 610 sequences, total weight= 77.7314 avg weight= 0.127429 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30349 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2h1vA/info/2h1vA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2h1vA/nostruct-align/2h1vA.t2k.a2m.gz, have 233507 columns in 1014 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jx6A/nostruct-align/1jx6A.t2k.a2m.gz
# 1jx6A.t2k.a2m with 297 sequences, total weight= 297 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23807 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jx6A/info/1jx6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jx6A/nostruct-align/1jx6A.t2k.a2m.gz, have 233845 columns in 1015 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tqgA/nostruct-align/1tqgA.t2k.a2m.gz
# 1tqgA.t2k.a2m with 314 sequences, total weight= 110.376 avg weight= 0.351514 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30113 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tqgA/info/1tqgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tqgA/nostruct-align/1tqgA.t2k.a2m.gz, have 233950 columns in 1016 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gzvA/nostruct-align/2gzvA.t2k.a2m.gz
# 2gzvA.t2k.a2m with 4079 sequences, total weight= 241.77 avg weight= 0.059272 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32325 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gzvA/info/2gzvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gzvA/nostruct-align/2gzvA.t2k.a2m.gz, have 234041 columns in 1017 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eb6A/nostruct-align/1eb6A.t2k.a2m.gz
# 1eb6A.t2k.a2m with 24 sequences, total weight= 14.703 avg weight= 0.612625 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eb6A/info/1eb6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1eb6A/nostruct-align/1eb6A.t2k.a2m.gz, have 234218 columns in 1018 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2ft0A/nostruct-align/2ft0A.t2k.a2m.gz
# 2ft0A.t2k.a2m with 46 sequences, total weight= 13.9825 avg weight= 0.303968 24 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2ft0A/info/2ft0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2ft0A/nostruct-align/2ft0A.t2k.a2m.gz, have 234440 columns in 1019 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2dtcA/nostruct-align/2dtcA.t2k.a2m.gz
# 2dtcA.t2k.a2m with 624 sequences, total weight= 624 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17442 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2dtcA/info/2dtcA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2dtcA/nostruct-align/2dtcA.t2k.a2m.gz, have 234556 columns in 1020 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ifc/nostruct-align/1ifc.t2k.a2m.gz
# 1ifc.t2k.a2m with 281 sequences, total weight= 25.61 avg weight= 0.0911389 39 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ifc/info/1ifc.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1ifc/nostruct-align/1ifc.t2k.a2m.gz, have 234687 columns in 1021 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lxjA/nostruct-align/1lxjA.t2k.a2m.gz
# 1lxjA.t2k.a2m with 48 sequences, total weight= 20.2945 avg weight= 0.422803 35 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lxjA/info/1lxjA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lxjA/nostruct-align/1lxjA.t2k.a2m.gz, have 234791 columns in 1022 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2oa2A/nostruct-align/2oa2A.t2k.a2m.gz
# 2oa2A.t2k.a2m with 601 sequences, total weight= 309.505 avg weight= 0.514984 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3026 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2oa2A/info/2oa2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2oa2A/nostruct-align/2oa2A.t2k.a2m.gz, have 234923 columns in 1023 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2oktA/nostruct-align/2oktA.t2k.a2m.gz
# 2oktA.t2k.a2m with 397 sequences, total weight= 397 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16323 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2oktA/info/2oktA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2oktA/nostruct-align/2oktA.t2k.a2m.gz, have 235265 columns in 1024 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vl2A/nostruct-align/1vl2A.t2k.a2m.gz
# 1vl2A.t2k.a2m with 347 sequences, total weight= 43.7225 avg weight= 0.126002 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vl2A/info/1vl2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vl2A/nostruct-align/1vl2A.t2k.a2m.gz, have 235663 columns in 1025 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2ig7A/nostruct-align/2ig7A.t2k.a2m.gz
# 2ig7A.t2k.a2m with 429 sequences, total weight= 429 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.999956 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2ig7A/info/2ig7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2ig7A/nostruct-align/2ig7A.t2k.a2m.gz, have 235998 columns in 1026 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lyvA/nostruct-align/1lyvA.t2k.a2m.gz
# 1lyvA.t2k.a2m with 602 sequences, total weight= 78.5151 avg weight= 0.130424 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30259 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lyvA/info/1lyvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lyvA/nostruct-align/1lyvA.t2k.a2m.gz, have 236281 columns in 1027 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xi3A/nostruct-align/1xi3A.t2k.a2m.gz
# 1xi3A.t2k.a2m with 1396 sequences, total weight= 1396 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09325 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xi3A/info/1xi3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xi3A/nostruct-align/1xi3A.t2k.a2m.gz, have 236483 columns in 1028 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b8zA/nostruct-align/1b8zA.t2k.a2m.gz
# 1b8zA.t2k.a2m with 399 sequences, total weight= 24.7642 avg weight= 0.0620657 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b8zA/info/1b8zA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1b8zA/nostruct-align/1b8zA.t2k.a2m.gz, have 236550 columns in 1029 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vjuA/nostruct-align/1vjuA.t2k.a2m.gz
# 1vjuA.t2k.a2m with 603 sequences, total weight= 12.4544 avg weight= 0.020654 39 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vjuA/info/1vjuA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vjuA/nostruct-align/1vjuA.t2k.a2m.gz, have 236841 columns in 1030 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nnhA/nostruct-align/1nnhA.t2k.a2m.gz
# 1nnhA.t2k.a2m with 720 sequences, total weight= 84.8736 avg weight= 0.11788 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30256 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nnhA/info/1nnhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nnhA/nostruct-align/1nnhA.t2k.a2m.gz, have 237134 columns in 1031 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hl2A/nostruct-align/1hl2A.t2k.a2m.gz
# 1hl2A.t2k.a2m with 321 sequences, total weight= 128.856 avg weight= 0.40142 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30205 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hl2A/info/1hl2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hl2A/nostruct-align/1hl2A.t2k.a2m.gz, have 237429 columns in 1032 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j6oA/nostruct-align/1j6oA.t2k.a2m.gz
# 1j6oA.t2k.a2m with 315 sequences, total weight= 115.313 avg weight= 0.366072 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30304 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j6oA/info/1j6oA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1j6oA/nostruct-align/1j6oA.t2k.a2m.gz, have 237689 columns in 1033 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fp2A/nostruct-align/1fp2A.t2k.a2m.gz
# 1fp2A.t2k.a2m with 322 sequences, total weight= 322 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2064 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fp2A/info/1fp2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fp2A/nostruct-align/1fp2A.t2k.a2m.gz, have 238034 columns in 1034 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v9fA/nostruct-align/1v9fA.t2k.a2m.gz
# 1v9fA.t2k.a2m with 761 sequences, total weight= 301.363 avg weight= 0.396009 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30543 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v9fA/info/1v9fA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v9fA/nostruct-align/1v9fA.t2k.a2m.gz, have 238284 columns in 1035 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qwgA/nostruct-align/1qwgA.t2k.a2m.gz
# 1qwgA.t2k.a2m with 16 sequences, total weight= 10.2828 avg weight= 0.642675 22 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qwgA/info/1qwgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qwgA/nostruct-align/1qwgA.t2k.a2m.gz, have 238535 columns in 1036 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mpgA/nostruct-align/1mpgA.t2k.a2m.gz
# 1mpgA.t2k.a2m with 237 sequences, total weight= 231.491 avg weight= 0.976756 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mpgA/info/1mpgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mpgA/nostruct-align/1mpgA.t2k.a2m.gz, have 238817 columns in 1037 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2de3A/nostruct-align/2de3A.t2k.a2m.gz
# 2de3A.t2k.a2m with 401 sequences, total weight= 401 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12356 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2de3A/info/2de3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2de3A/nostruct-align/2de3A.t2k.a2m.gz, have 239161 columns in 1038 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2asfA/nostruct-align/2asfA.t2k.a2m.gz
# 2asfA.t2k.a2m with 40 sequences, total weight= 40 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29967 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2asfA/info/2asfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2asfA/nostruct-align/2asfA.t2k.a2m.gz, have 239286 columns in 1039 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gnpA/nostruct-align/2gnpA.t2k.a2m.gz
# 2gnpA.t2k.a2m with 292 sequences, total weight= 184.72 avg weight= 0.632602 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3037 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gnpA/info/2gnpA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gnpA/nostruct-align/2gnpA.t2k.a2m.gz, have 239548 columns in 1040 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2e/2et1A/nostruct-align/2et1A.t2k.a2m.gz
# 2et1A.t2k.a2m with 672 sequences, total weight= 672 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11291 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2e/2et1A/info/2et1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2e/2et1A/nostruct-align/2et1A.t2k.a2m.gz, have 239749 columns in 1041 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1z9lA/nostruct-align/1z9lA.t2k.a2m.gz
# 1z9lA.t2k.a2m with 347 sequences, total weight= 343.389 avg weight= 0.989592 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1z9lA/info/1z9lA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1z9lA/nostruct-align/1z9lA.t2k.a2m.gz, have 239875 columns in 1042 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1os6A/nostruct-align/1os6A.t2k.a2m.gz
# 1os6A.t2k.a2m with 44 sequences, total weight= 20.8897 avg weight= 0.474767 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1os6A/info/1os6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1os6A/nostruct-align/1os6A.t2k.a2m.gz, have 239946 columns in 1043 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gvzA/nostruct-align/1gvzA.t2k.a2m.gz
# 1gvzA.t2k.a2m with 2427 sequences, total weight= 788.467 avg weight= 0.324873 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32332 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gvzA/info/1gvzA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gvzA/nostruct-align/1gvzA.t2k.a2m.gz, have 240183 columns in 1044 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nlsA/nostruct-align/2nlsA.t2k.a2m.gz
# 2nlsA.t2k.a2m with 29 sequences, total weight= 2.63233 avg weight= 0.0907699 17 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nlsA/info/2nlsA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2n/2nlsA/nostruct-align/2nlsA.t2k.a2m.gz, have 240219 columns in 1045 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zjaA/nostruct-align/1zjaA.t2k.a2m.gz
# 1zjaA.t2k.a2m with 3337 sequences, total weight= 3337 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.914748 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zjaA/info/1zjaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zjaA/nostruct-align/1zjaA.t2k.a2m.gz, have 240776 columns in 1046 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i1wA/nostruct-align/1i1wA.t2k.a2m.gz
# 1i1wA.t2k.a2m with 230 sequences, total weight= 56.148 avg weight= 0.244122 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i1wA/info/1i1wA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1i1wA/nostruct-align/1i1wA.t2k.a2m.gz, have 241079 columns in 1047 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2b5aA/nostruct-align/2b5aA.t2k.a2m.gz
# 2b5aA.t2k.a2m with 1995 sequences, total weight= 137.564 avg weight= 0.0689542 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30294 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2b5aA/info/2b5aA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2b5aA/nostruct-align/2b5aA.t2k.a2m.gz, have 241156 columns in 1048 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1ten/nostruct-align/1ten.t2k.a2m.gz
# 1ten.t2k.a2m with 2050 sequences, total weight= 2050 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12142 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1ten/info/1ten.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1ten/nostruct-align/1ten.t2k.a2m.gz, have 241245 columns in 1049 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2aq5A/nostruct-align/2aq5A.t2k.a2m.gz
# 2aq5A.t2k.a2m with 7769 sequences, total weight= 7769 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.808956 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2aq5A/info/2aq5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2aq5A/nostruct-align/2aq5A.t2k.a2m.gz, have 241640 columns in 1050 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gvfA/nostruct-align/1gvfA.t2k.a2m.gz
# 1gvfA.t2k.a2m with 250 sequences, total weight= 18.3602 avg weight= 0.0734408 42 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gvfA/info/1gvfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gvfA/nostruct-align/1gvfA.t2k.a2m.gz, have 241913 columns in 1051 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2h7zB/nostruct-align/2h7zB.t2k.a2m.gz
# 2h7zB.t2k.a2m with 380 sequences, total weight= 16.3122 avg weight= 0.0429268 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2h7zB/info/2h7zB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2h7zB/nostruct-align/2h7zB.t2k.a2m.gz, have 241990 columns in 1052 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pvmA/nostruct-align/1pvmA.t2k.a2m.gz
# 1pvmA.t2k.a2m with 1134 sequences, total weight= 1134 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22116 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pvmA/info/1pvmA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pvmA/nostruct-align/1pvmA.t2k.a2m.gz, have 242168 columns in 1053 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hbnA/nostruct-align/1hbnA.t2k.a2m.gz
# 1hbnA.t2k.a2m with 318 sequences, total weight= 6.17519 avg weight= 0.0194188 18 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hbnA/info/1hbnA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hbnA/nostruct-align/1hbnA.t2k.a2m.gz, have 242715 columns in 1054 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cjtA/nostruct-align/2cjtA.t2k.a2m.gz
# 2cjtA.t2k.a2m with 304 sequences, total weight= 55.3648 avg weight= 0.182121 44 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cjtA/info/2cjtA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cjtA/nostruct-align/2cjtA.t2k.a2m.gz, have 242836 columns in 1055 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1th7A/nostruct-align/1th7A.t2k.a2m.gz
# 1th7A.t2k.a2m with 696 sequences, total weight= 70.4716 avg weight= 0.101252 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30039 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1th7A/info/1th7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1th7A/nostruct-align/1th7A.t2k.a2m.gz, have 242914 columns in 1056 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jy2P/nostruct-align/1jy2P.t2k.a2m.gz
# 1jy2P.t2k.a2m with 42 sequences, total weight= 3.69972 avg weight= 0.0880885 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jy2P/info/1jy2P.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jy2P/nostruct-align/1jy2P.t2k.a2m.gz, have 242958 columns in 1057 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2calA/nostruct-align/2calA.t2k.a2m.gz
# 2calA.t2k.a2m with 99 sequences, total weight= 99 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25398 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2calA/info/2calA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2calA/nostruct-align/2calA.t2k.a2m.gz, have 243111 columns in 1058 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2b0aA/nostruct-align/2b0aA.t2k.a2m.gz
# 2b0aA.t2k.a2m with 70 sequences, total weight= 40.1567 avg weight= 0.573667 44 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2b0aA/info/2b0aA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2b0aA/nostruct-align/2b0aA.t2k.a2m.gz, have 243297 columns in 1059 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2o7rA/nostruct-align/2o7rA.t2k.a2m.gz
# 2o7rA.t2k.a2m with 3326 sequences, total weight= 3326 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.975977 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2o7rA/info/2o7rA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2o7rA/nostruct-align/2o7rA.t2k.a2m.gz, have 243604 columns in 1060 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eexG/nostruct-align/1eexG.t2k.a2m.gz
# 1eexG.t2k.a2m with 18 sequences, total weight= 3.56698 avg weight= 0.198165 15 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eexG/info/1eexG.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1eexG/nostruct-align/1eexG.t2k.a2m.gz, have 243741 columns in 1061 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m0kA/nostruct-align/1m0kA.t2k.a2m.gz
# 1m0kA.t2k.a2m with 158 sequences, total weight= 25.9713 avg weight= 0.164376 38 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m0kA/info/1m0kA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m0kA/nostruct-align/1m0kA.t2k.a2m.gz, have 243963 columns in 1062 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xbbA/nostruct-align/1xbbA.t2k.a2m.gz
# 1xbbA.t2k.a2m with 17833 sequences, total weight= 17833 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22828 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xbbA/info/1xbbA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xbbA/nostruct-align/1xbbA.t2k.a2m.gz, have 244231 columns in 1063 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ydiA/nostruct-align/1ydiA.t2k.a2m.gz
# 1ydiA.t2k.a2m with 170 sequences, total weight= 61.3289 avg weight= 0.360758 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ydiA/info/1ydiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1ydiA/nostruct-align/1ydiA.t2k.a2m.gz, have 244487 columns in 1064 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m6pA/nostruct-align/1m6pA.t2k.a2m.gz
# 1m6pA.t2k.a2m with 307 sequences, total weight= 69.108 avg weight= 0.225108 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30094 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m6pA/info/1m6pA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m6pA/nostruct-align/1m6pA.t2k.a2m.gz, have 244633 columns in 1065 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1z0jB/nostruct-align/1z0jB.t2k.a2m.gz
# 1z0jB.t2k.a2m with 22 sequences, total weight= 3.28624 avg weight= 0.149374 12 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1z0jB/info/1z0jB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1z0jB/nostruct-align/1z0jB.t2k.a2m.gz, have 244684 columns in 1066 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nnlA/nostruct-align/1nnlA.t2k.a2m.gz
# 1nnlA.t2k.a2m with 329 sequences, total weight= 329 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09499 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nnlA/info/1nnlA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nnlA/nostruct-align/1nnlA.t2k.a2m.gz, have 244889 columns in 1067 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hw1A/nostruct-align/1hw1A.t2k.a2m.gz
# 1hw1A.t2k.a2m with 465 sequences, total weight= 465 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1012 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hw1A/info/1hw1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hw1A/nostruct-align/1hw1A.t2k.a2m.gz, have 245115 columns in 1068 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2g30A/nostruct-align/2g30A.t2k.a2m.gz
# 2g30A.t2k.a2m with 113 sequences, total weight= 18.9337 avg weight= 0.167555 32 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2g30A/info/2g30A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2g30A/nostruct-align/2g30A.t2k.a2m.gz, have 245348 columns in 1069 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dptA/nostruct-align/1dptA.t2k.a2m.gz
# 1dptA.t2k.a2m with 81 sequences, total weight= 17.6945 avg weight= 0.21845 32 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dptA/info/1dptA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dptA/nostruct-align/1dptA.t2k.a2m.gz, have 245465 columns in 1070 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1al3/nostruct-align/1al3.t2k.a2m.gz
# 1al3.t2k.a2m with 1118 sequences, total weight= 1118 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04031 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1al3/info/1al3.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1al3/nostruct-align/1al3.t2k.a2m.gz, have 245702 columns in 1071 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w2yA/nostruct-align/1w2yA.t2k.a2m.gz
# 1w2yA.t2k.a2m with 27 sequences, total weight= 19.8742 avg weight= 0.736081 20 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w2yA/info/1w2yA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w2yA/nostruct-align/1w2yA.t2k.a2m.gz, have 245928 columns in 1072 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1ty9A/nostruct-align/1ty9A.t2k.a2m.gz
# 1ty9A.t2k.a2m with 184 sequences, total weight= 28.6836 avg weight= 0.155889 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1ty9A/info/1ty9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1ty9A/nostruct-align/1ty9A.t2k.a2m.gz, have 246130 columns in 1073 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fj2A/nostruct-align/1fj2A.t2k.a2m.gz
# 1fj2A.t2k.a2m with 299 sequences, total weight= 299 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.980355 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fj2A/info/1fj2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fj2A/nostruct-align/1fj2A.t2k.a2m.gz, have 246359 columns in 1074 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gg6A/nostruct-align/2gg6A.t2k.a2m.gz
# 2gg6A.t2k.a2m with 1138 sequences, total weight= 148.738 avg weight= 0.130701 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31234 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gg6A/info/2gg6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gg6A/nostruct-align/2gg6A.t2k.a2m.gz, have 246804 columns in 1075 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w0hA/nostruct-align/1w0hA.t2k.a2m.gz
# 1w0hA.t2k.a2m with 236 sequences, total weight= 236 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28936 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w0hA/info/1w0hA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w0hA/nostruct-align/1w0hA.t2k.a2m.gz, have 247004 columns in 1076 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fwvA/nostruct-align/2fwvA.t2k.a2m.gz
# 2fwvA.t2k.a2m with 38 sequences, total weight= 10.8836 avg weight= 0.286411 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fwvA/info/2fwvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fwvA/nostruct-align/2fwvA.t2k.a2m.gz, have 247194 columns in 1077 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sxrA/nostruct-align/1sxrA.t2k.a2m.gz
# 1sxrA.t2k.a2m with 185 sequences, total weight= 37.5479 avg weight= 0.202961 44 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sxrA/info/1sxrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1sxrA/nostruct-align/1sxrA.t2k.a2m.gz, have 247367 columns in 1078 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c4qA/nostruct-align/1c4qA.t2k.a2m.gz
# 1c4qA.t2k.a2m with 66 sequences, total weight= 2.86201 avg weight= 0.0433638 13 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c4qA/info/1c4qA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1c4qA/nostruct-align/1c4qA.t2k.a2m.gz, have 247436 columns in 1079 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m93A/nostruct-align/1m93A.t2k.a2m.gz
# 1m93A.t2k.a2m with 530 sequences, total weight= 14.2498 avg weight= 0.0268865 42 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m93A/info/1m93A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m93A/nostruct-align/1m93A.t2k.a2m.gz, have 247482 columns in 1080 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t1vA/nostruct-align/1t1vA.t2k.a2m.gz
# 1t1vA.t2k.a2m with 300 sequences, total weight= 57.6755 avg weight= 0.192252 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t1vA/info/1t1vA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1t1vA/nostruct-align/1t1vA.t2k.a2m.gz, have 247575 columns in 1081 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j0pA/nostruct-align/1j0pA.t2k.a2m.gz
# 1j0pA.t2k.a2m with 97 sequences, total weight= 97 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2661 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j0pA/info/1j0pA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1j0pA/nostruct-align/1j0pA.t2k.a2m.gz, have 247683 columns in 1082 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1llfA/nostruct-align/1llfA.t2k.a2m.gz
# 1llfA.t2k.a2m with 829 sequences, total weight= 829 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23038 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1llfA/info/1llfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1llfA/nostruct-align/1llfA.t2k.a2m.gz, have 248217 columns in 1083 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mg4A/nostruct-align/1mg4A.t2k.a2m.gz
# 1mg4A.t2k.a2m with 105 sequences, total weight= 33.765 avg weight= 0.321572 41 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mg4A/info/1mg4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mg4A/nostruct-align/1mg4A.t2k.a2m.gz, have 248318 columns in 1084 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gvp/nostruct-align/1gvp.t2k.a2m.gz
# 1gvp.t2k.a2m with 28 sequences, total weight= 4.53992 avg weight= 0.16214 18 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gvp/info/1gvp.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gvp/nostruct-align/1gvp.t2k.a2m.gz, have 248405 columns in 1085 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2i24N/nostruct-align/2i24N.t2k.a2m.gz
# 2i24N.t2k.a2m with 20110 sequences, total weight= 138.277 avg weight= 0.00687602 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.36015 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2i24N/info/2i24N.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2i24N/nostruct-align/2i24N.t2k.a2m.gz, have 248518 columns in 1086 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1knmA/nostruct-align/1knmA.t2k.a2m.gz
# 1knmA.t2k.a2m with 337 sequences, total weight= 337 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14482 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1knmA/info/1knmA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1knmA/nostruct-align/1knmA.t2k.a2m.gz, have 248647 columns in 1087 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2c3vA/nostruct-align/2c3vA.t2k.a2m.gz
# 2c3vA.t2k.a2m with 20 sequences, total weight= 6.72991 avg weight= 0.336495 22 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2c3vA/info/2c3vA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2c3vA/nostruct-align/2c3vA.t2k.a2m.gz, have 248741 columns in 1088 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t2wA/nostruct-align/1t2wA.t2k.a2m.gz
# 1t2wA.t2k.a2m with 130 sequences, total weight= 31.3842 avg weight= 0.241417 45 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t2wA/info/1t2wA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1t2wA/nostruct-align/1t2wA.t2k.a2m.gz, have 248886 columns in 1089 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y6xA/nostruct-align/1y6xA.t2k.a2m.gz
# 1y6xA.t2k.a2m with 234 sequences, total weight= 14.7558 avg weight= 0.0630589 41 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y6xA/info/1y6xA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1y6xA/nostruct-align/1y6xA.t2k.a2m.gz, have 248973 columns in 1090 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gvkA/nostruct-align/2gvkA.t2k.a2m.gz
# 2gvkA.t2k.a2m with 227 sequences, total weight= 70.4675 avg weight= 0.31043 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30073 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gvkA/info/2gvkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gvkA/nostruct-align/2gvkA.t2k.a2m.gz, have 249282 columns in 1091 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2dbnA/nostruct-align/2dbnA.t2k.a2m.gz
# 2dbnA.t2k.a2m with 87 sequences, total weight= 38.5855 avg weight= 0.443511 38 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2dbnA/info/2dbnA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2dbnA/nostruct-align/2dbnA.t2k.a2m.gz, have 249685 columns in 1092 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o9gA/nostruct-align/1o9gA.t2k.a2m.gz
# 1o9gA.t2k.a2m with 30 sequences, total weight= 21.6522 avg weight= 0.72174 20 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o9gA/info/1o9gA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1o9gA/nostruct-align/1o9gA.t2k.a2m.gz, have 249934 columns in 1093 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1ccwB/nostruct-align/1ccwB.t2k.a2m.gz
# 1ccwB.t2k.a2m with 15 sequences, total weight= 5.0339 avg weight= 0.335593 18 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1ccwB/info/1ccwB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1ccwB/nostruct-align/1ccwB.t2k.a2m.gz, have 250417 columns in 1094 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1ghpA/nostruct-align/1ghpA.t2k.a2m.gz
# 1ghpA.t2k.a2m with 345 sequences, total weight= 37.677 avg weight= 0.109209 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1ghpA/info/1ghpA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1ghpA/nostruct-align/1ghpA.t2k.a2m.gz, have 250674 columns in 1095 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kpf/nostruct-align/1kpf.t2k.a2m.gz
# 1kpf.t2k.a2m with 355 sequences, total weight= 83.3854 avg weight= 0.234888 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30111 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kpf/info/1kpf.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kpf/nostruct-align/1kpf.t2k.a2m.gz, have 250785 columns in 1096 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o26A/nostruct-align/1o26A.t2k.a2m.gz
# 1o26A.t2k.a2m with 78 sequences, total weight= 78 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26499 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o26A/info/1o26A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1o26A/nostruct-align/1o26A.t2k.a2m.gz, have 251004 columns in 1097 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1en2A/nostruct-align/1en2A.t2k.a2m.gz
# 1en2A.t2k.a2m with 283 sequences, total weight= 16.0487 avg weight= 0.0567091 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1en2A/info/1en2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1en2A/nostruct-align/1en2A.t2k.a2m.gz, have 251090 columns in 1098 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sdiA/nostruct-align/1sdiA.t2k.a2m.gz
# 1sdiA.t2k.a2m with 49 sequences, total weight= 8.75368 avg weight= 0.178647 28 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sdiA/info/1sdiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1sdiA/nostruct-align/1sdiA.t2k.a2m.gz, have 251303 columns in 1099 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2brfA/nostruct-align/2brfA.t2k.a2m.gz
# 2brfA.t2k.a2m with 70 sequences, total weight= 13.0954 avg weight= 0.187076 29 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2brfA/info/2brfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2brfA/nostruct-align/2brfA.t2k.a2m.gz, have 251403 columns in 1100 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xmtA/nostruct-align/1xmtA.t2k.a2m.gz
# 1xmtA.t2k.a2m with 100 sequences, total weight= 33.9745 avg weight= 0.339745 41 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xmtA/info/1xmtA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xmtA/nostruct-align/1xmtA.t2k.a2m.gz, have 251498 columns in 1101 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2a15A/nostruct-align/2a15A.t2k.a2m.gz
# 2a15A.t2k.a2m with 70 sequences, total weight= 54.5519 avg weight= 0.779313 45 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2a15A/info/2a15A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2a15A/nostruct-align/2a15A.t2k.a2m.gz, have 251631 columns in 1102 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hxtA/nostruct-align/2hxtA.t2k.a2m.gz
# 2hxtA.t2k.a2m with 1306 sequences, total weight= 1306 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11292 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hxtA/info/2hxtA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hxtA/nostruct-align/2hxtA.t2k.a2m.gz, have 252065 columns in 1103 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jmkC/nostruct-align/1jmkC.t2k.a2m.gz
# 1jmkC.t2k.a2m with 296 sequences, total weight= 296 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08277 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jmkC/info/1jmkC.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jmkC/nostruct-align/1jmkC.t2k.a2m.gz, have 252287 columns in 1104 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v3wA/nostruct-align/1v3wA.t2k.a2m.gz
# 1v3wA.t2k.a2m with 1350 sequences, total weight= 1350 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25017 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v3wA/info/1v3wA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v3wA/nostruct-align/1v3wA.t2k.a2m.gz, have 252460 columns in 1105 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rocA/nostruct-align/1rocA.t2k.a2m.gz
# 1rocA.t2k.a2m with 34 sequences, total weight= 8.43047 avg weight= 0.247955 23 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rocA/info/1rocA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rocA/nostruct-align/1rocA.t2k.a2m.gz, have 252615 columns in 1106 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2ofyA/nostruct-align/2ofyA.t2k.a2m.gz
# 2ofyA.t2k.a2m with 25 sequences, total weight= 7.1835 avg weight= 0.28734 22 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2ofyA/info/2ofyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2ofyA/nostruct-align/2ofyA.t2k.a2m.gz, have 252697 columns in 1107 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2m/2msbA/nostruct-align/2msbA.t2k.a2m.gz
# 2msbA.t2k.a2m with 624 sequences, total weight= 624 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22838 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2m/2msbA/info/2msbA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2m/2msbA/nostruct-align/2msbA.t2k.a2m.gz, have 252808 columns in 1108 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v70A/nostruct-align/1v70A.t2k.a2m.gz
# 1v70A.t2k.a2m with 761 sequences, total weight= 761 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15099 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v70A/info/1v70A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v70A/nostruct-align/1v70A.t2k.a2m.gz, have 252913 columns in 1109 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1umgA/nostruct-align/1umgA.t2k.a2m.gz
# 1umgA.t2k.a2m with 26 sequences, total weight= 3.70732 avg weight= 0.142589 18 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1umgA/info/1umgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1umgA/nostruct-align/1umgA.t2k.a2m.gz, have 253272 columns in 1110 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gkpA/nostruct-align/1gkpA.t2k.a2m.gz
# 1gkpA.t2k.a2m with 608 sequences, total weight= 608 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00745 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gkpA/info/1gkpA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gkpA/nostruct-align/1gkpA.t2k.a2m.gz, have 253730 columns in 1111 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gnlA/nostruct-align/1gnlA.t2k.a2m.gz
# 1gnlA.t2k.a2m with 82 sequences, total weight= 18.5003 avg weight= 0.225613 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gnlA/info/1gnlA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gnlA/nostruct-align/1gnlA.t2k.a2m.gz, have 254273 columns in 1112 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wr8A/nostruct-align/1wr8A.t2k.a2m.gz
# 1wr8A.t2k.a2m with 1268 sequences, total weight= 1268 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07356 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wr8A/info/1wr8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wr8A/nostruct-align/1wr8A.t2k.a2m.gz, have 254503 columns in 1113 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bj7/nostruct-align/1bj7.t2k.a2m.gz
# 1bj7.t2k.a2m with 169 sequences, total weight= 52.3944 avg weight= 0.310026 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bj7/info/1bj7.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1bj7/nostruct-align/1bj7.t2k.a2m.gz, have 254653 columns in 1114 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e2wA/nostruct-align/1e2wA.t2k.a2m.gz
# 1e2wA.t2k.a2m with 69 sequences, total weight= 3.46724 avg weight= 0.0502498 20 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e2wA/info/1e2wA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1e2wA/nostruct-align/1e2wA.t2k.a2m.gz, have 254904 columns in 1115 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ic6A/nostruct-align/1ic6A.t2k.a2m.gz
# 1ic6A.t2k.a2m with 606 sequences, total weight= 144.826 avg weight= 0.238987 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30518 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ic6A/info/1ic6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1ic6A/nostruct-align/1ic6A.t2k.a2m.gz, have 255183 columns in 1116 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wl4A/nostruct-align/1wl4A.t2k.a2m.gz
# 1wl4A.t2k.a2m with 2077 sequences, total weight= 363.776 avg weight= 0.175145 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32705 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wl4A/info/1wl4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wl4A/nostruct-align/1wl4A.t2k.a2m.gz, have 255577 columns in 1117 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v2xA/nostruct-align/1v2xA.t2k.a2m.gz
# 1v2xA.t2k.a2m with 699 sequences, total weight= 221.643 avg weight= 0.317086 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30226 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v2xA/info/1v2xA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v2xA/nostruct-align/1v2xA.t2k.a2m.gz, have 255768 columns in 1118 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vjoA/nostruct-align/1vjoA.t2k.a2m.gz
# 1vjoA.t2k.a2m with 1733 sequences, total weight= 1733 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.98906 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vjoA/info/1vjoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vjoA/nostruct-align/1vjoA.t2k.a2m.gz, have 256145 columns in 1119 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mqvA/nostruct-align/1mqvA.t2k.a2m.gz
# 1mqvA.t2k.a2m with 61 sequences, total weight= 25.4436 avg weight= 0.417108 39 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mqvA/info/1mqvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mqvA/nostruct-align/1mqvA.t2k.a2m.gz, have 256268 columns in 1120 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t0bA/nostruct-align/1t0bA.t2k.a2m.gz
# 1t0bA.t2k.a2m with 17 sequences, total weight= 3.12378 avg weight= 0.183752 15 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t0bA/info/1t0bA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1t0bA/nostruct-align/1t0bA.t2k.a2m.gz, have 256508 columns in 1121 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hy6A/nostruct-align/2hy6A.t2k.a2m.gz
# 2hy6A.t2k.a2m with 32 sequences, total weight= 2.34713 avg weight= 0.0733477 12 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hy6A/info/2hy6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hy6A/nostruct-align/2hy6A.t2k.a2m.gz, have 256539 columns in 1122 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cjwA/nostruct-align/1cjwA.t2k.a2m.gz
# 1cjwA.t2k.a2m with 256 sequences, total weight= 256 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.985499 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cjwA/info/1cjwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1cjwA/nostruct-align/1cjwA.t2k.a2m.gz, have 256705 columns in 1123 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bopA/nostruct-align/2bopA.t2k.a2m.gz
# 2bopA.t2k.a2m with 162 sequences, total weight= 14.1111 avg weight= 0.0871059 36 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bopA/info/2bopA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bopA/nostruct-align/2bopA.t2k.a2m.gz, have 256790 columns in 1124 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e85A/nostruct-align/1e85A.t2k.a2m.gz
# 1e85A.t2k.a2m with 62 sequences, total weight= 30.7723 avg weight= 0.496327 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e85A/info/1e85A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1e85A/nostruct-align/1e85A.t2k.a2m.gz, have 256915 columns in 1125 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c75A/nostruct-align/1c75A.t2k.a2m.gz
# 1c75A.t2k.a2m with 303 sequences, total weight= 118.397 avg weight= 0.390748 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30227 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c75A/info/1c75A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1c75A/nostruct-align/1c75A.t2k.a2m.gz, have 256986 columns in 1126 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xttA/nostruct-align/1xttA.t2k.a2m.gz
# 1xttA.t2k.a2m with 384 sequences, total weight= 54.7784 avg weight= 0.142652 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30032 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xttA/info/1xttA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xttA/nostruct-align/1xttA.t2k.a2m.gz, have 257201 columns in 1127 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a62/nostruct-align/1a62.t2k.a2m.gz
# 1a62.t2k.a2m with 164 sequences, total weight= 11.9798 avg weight= 0.0730474 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a62/info/1a62.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1a62/nostruct-align/1a62.t2k.a2m.gz, have 257326 columns in 1128 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2osxA/nostruct-align/2osxA.t2k.a2m.gz
# 2osxA.t2k.a2m with 357 sequences, total weight= 357 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.871352 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2osxA/info/2osxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2osxA/nostruct-align/2osxA.t2k.a2m.gz, have 257775 columns in 1129 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bgc/nostruct-align/1bgc.t2k.a2m.gz
# 1bgc.t2k.a2m with 59 sequences, total weight= 10.3927 avg weight= 0.176147 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bgc/info/1bgc.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1bgc/nostruct-align/1bgc.t2k.a2m.gz, have 257933 columns in 1130 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2p/2p3zA/nostruct-align/2p3zA.t2k.a2m.gz
# 2p3zA.t2k.a2m with 1080 sequences, total weight= 376.71 avg weight= 0.348806 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31072 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2p/2p3zA/info/2p3zA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2p/2p3zA/nostruct-align/2p3zA.t2k.a2m.gz, have 258338 columns in 1131 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qxyA/nostruct-align/1qxyA.t2k.a2m.gz
# 1qxyA.t2k.a2m with 2074 sequences, total weight= 2074 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27539 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qxyA/info/1qxyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qxyA/nostruct-align/1qxyA.t2k.a2m.gz, have 258587 columns in 1132 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wba/nostruct-align/1wba.t2k.a2m.gz
# 1wba.t2k.a2m with 181 sequences, total weight= 37.3951 avg weight= 0.206603 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wba/info/1wba.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wba/nostruct-align/1wba.t2k.a2m.gz, have 258758 columns in 1133 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vr8A/nostruct-align/1vr8A.t2k.a2m.gz
# 1vr8A.t2k.a2m with 7 sequences, total weight= 5.05648 avg weight= 0.722354 14 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vr8A/info/1vr8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vr8A/nostruct-align/1vr8A.t2k.a2m.gz, have 258893 columns in 1134 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2dbqA/nostruct-align/2dbqA.t2k.a2m.gz
# 2dbqA.t2k.a2m with 2757 sequences, total weight= 1255.58 avg weight= 0.455415 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31756 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2dbqA/info/2dbqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2dbqA/nostruct-align/2dbqA.t2k.a2m.gz, have 259226 columns in 1135 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yxyA/nostruct-align/1yxyA.t2k.a2m.gz
# 1yxyA.t2k.a2m with 544 sequences, total weight= 544 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22868 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yxyA/info/1yxyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yxyA/nostruct-align/1yxyA.t2k.a2m.gz, have 259456 columns in 1136 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2amlA/nostruct-align/2amlA.t2k.a2m.gz
# 2amlA.t2k.a2m with 587 sequences, total weight= 97.7216 avg weight= 0.166476 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30201 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2amlA/info/2amlA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2amlA/nostruct-align/2amlA.t2k.a2m.gz, have 259822 columns in 1137 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sg0A/nostruct-align/1sg0A.t2k.a2m.gz
# 1sg0A.t2k.a2m with 576 sequences, total weight= 576 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13818 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sg0A/info/1sg0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1sg0A/nostruct-align/1sg0A.t2k.a2m.gz, have 260052 columns in 1138 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2blfA/nostruct-align/2blfA.t2k.a2m.gz
# 2blfA.t2k.a2m with 372 sequences, total weight= 107.229 avg weight= 0.28825 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30095 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2blfA/info/2blfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2blfA/nostruct-align/2blfA.t2k.a2m.gz, have 260425 columns in 1139 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2j7qA/nostruct-align/2j7qA.t2k.a2m.gz
# 2j7qA.t2k.a2m with 84 sequences, total weight= 34.4051 avg weight= 0.409585 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2j7qA/info/2j7qA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2j7qA/nostruct-align/2j7qA.t2k.a2m.gz, have 260657 columns in 1140 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nszA/nostruct-align/1nszA.t2k.a2m.gz
# 1nszA.t2k.a2m with 128 sequences, total weight= 78.952 avg weight= 0.616813 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3003 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nszA/info/1nszA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nszA/nostruct-align/1nszA.t2k.a2m.gz, have 260997 columns in 1141 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3d/3dfr/nostruct-align/3dfr.t2k.a2m.gz
# 3dfr.t2k.a2m with 398 sequences, total weight= 59.4782 avg weight= 0.149443 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30086 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3d/3dfr/info/3dfr.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/3d/3dfr/nostruct-align/3dfr.t2k.a2m.gz, have 261159 columns in 1142 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fx5A/nostruct-align/2fx5A.t2k.a2m.gz
# 2fx5A.t2k.a2m with 148 sequences, total weight= 148 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07026 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fx5A/info/2fx5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fx5A/nostruct-align/2fx5A.t2k.a2m.gz, have 261417 columns in 1143 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gzsA/nostruct-align/2gzsA.t2k.a2m.gz
# 2gzsA.t2k.a2m with 139 sequences, total weight= 139 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05955 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gzsA/info/2gzsA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gzsA/nostruct-align/2gzsA.t2k.a2m.gz, have 261666 columns in 1144 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xk4C/nostruct-align/1xk4C.t2k.a2m.gz
# 1xk4C.t2k.a2m with 338 sequences, total weight= 35.9128 avg weight= 0.106251 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xk4C/info/1xk4C.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xk4C/nostruct-align/1xk4C.t2k.a2m.gz, have 261755 columns in 1145 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fafA/nostruct-align/2fafA.t2k.a2m.gz
# 2fafA.t2k.a2m with 538 sequences, total weight= 21.1132 avg weight= 0.0392438 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fafA/info/2fafA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fafA/nostruct-align/2fafA.t2k.a2m.gz, have 262351 columns in 1146 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dd9A/nostruct-align/1dd9A.t2k.a2m.gz
# 1dd9A.t2k.a2m with 211 sequences, total weight= 112.672 avg weight= 0.533991 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30104 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dd9A/info/1dd9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dd9A/nostruct-align/1dd9A.t2k.a2m.gz, have 262661 columns in 1147 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2e/2erfA/nostruct-align/2erfA.t2k.a2m.gz
# 2erfA.t2k.a2m with 206 sequences, total weight= 206 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26369 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2e/2erfA/info/2erfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2e/2erfA/nostruct-align/2erfA.t2k.a2m.gz, have 262870 columns in 1148 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wakA/nostruct-align/1wakA.t2k.a2m.gz
# 1wakA.t2k.a2m with 20193 sequences, total weight= 20193 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00525 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wakA/info/1wakA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wakA/nostruct-align/1wakA.t2k.a2m.gz, have 263223 columns in 1149 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c1dA/nostruct-align/1c1dA.t2k.a2m.gz
# 1c1dA.t2k.a2m with 474 sequences, total weight= 41.5171 avg weight= 0.0875888 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c1dA/info/1c1dA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1c1dA/nostruct-align/1c1dA.t2k.a2m.gz, have 263572 columns in 1150 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m9zA/nostruct-align/1m9zA.t2k.a2m.gz
# 1m9zA.t2k.a2m with 25 sequences, total weight= 3.16454 avg weight= 0.126582 16 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m9zA/info/1m9zA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m9zA/nostruct-align/1m9zA.t2k.a2m.gz, have 263677 columns in 1151 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vk5A/nostruct-align/1vk5A.t2k.a2m.gz
# 1vk5A.t2k.a2m with 7 sequences, total weight= 2.71683 avg weight= 0.388118 10 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vk5A/info/1vk5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vk5A/nostruct-align/1vk5A.t2k.a2m.gz, have 263798 columns in 1152 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ie9A/nostruct-align/1ie9A.t2k.a2m.gz
# 1ie9A.t2k.a2m with 913 sequences, total weight= 913 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13857 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ie9A/info/1ie9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1ie9A/nostruct-align/1ie9A.t2k.a2m.gz, have 264053 columns in 1153 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dyqA/nostruct-align/1dyqA.t2k.a2m.gz
# 1dyqA.t2k.a2m with 207 sequences, total weight= 49.381 avg weight= 0.238556 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dyqA/info/1dyqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dyqA/nostruct-align/1dyqA.t2k.a2m.gz, have 264281 columns in 1154 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nogA/nostruct-align/1nogA.t2k.a2m.gz
# 1nogA.t2k.a2m with 87 sequences, total weight= 14.9883 avg weight= 0.172279 36 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nogA/info/1nogA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nogA/nostruct-align/1nogA.t2k.a2m.gz, have 264430 columns in 1155 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wddS/nostruct-align/1wddS.t2k.a2m.gz
# 1wddS.t2k.a2m with 667 sequences, total weight= 14.1587 avg weight= 0.0212274 32 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wddS/info/1wddS.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wddS/nostruct-align/1wddS.t2k.a2m.gz, have 264552 columns in 1156 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cruA/nostruct-align/1cruA.t2k.a2m.gz
# 1cruA.t2k.a2m with 132 sequences, total weight= 132 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2908 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cruA/info/1cruA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1cruA/nostruct-align/1cruA.t2k.a2m.gz, have 265000 columns in 1157 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dc1A/nostruct-align/1dc1A.t2k.a2m.gz
# 1dc1A.t2k.a2m with 7 sequences, total weight= 2.70154 avg weight= 0.385934 11 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dc1A/info/1dc1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dc1A/nostruct-align/1dc1A.t2k.a2m.gz, have 265310 columns in 1158 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2o2xA/nostruct-align/2o2xA.t2k.a2m.gz
# 2o2xA.t2k.a2m with 1601 sequences, total weight= 1601 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19659 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2o2xA/info/2o2xA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2o2xA/nostruct-align/2o2xA.t2k.a2m.gz, have 265519 columns in 1159 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hhpA/nostruct-align/2hhpA.t2k.a2m.gz
# 2hhpA.t2k.a2m with 315 sequences, total weight= 315 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23338 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hhpA/info/2hhpA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hhpA/nostruct-align/2hhpA.t2k.a2m.gz, have 266027 columns in 1160 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ye8A/nostruct-align/1ye8A.t2k.a2m.gz
# 1ye8A.t2k.a2m with 183 sequences, total weight= 121.493 avg weight= 0.663897 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30062 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ye8A/info/1ye8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1ye8A/nostruct-align/1ye8A.t2k.a2m.gz, have 266199 columns in 1161 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rliA/nostruct-align/1rliA.t2k.a2m.gz
# 1rliA.t2k.a2m with 338 sequences, total weight= 338 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1252 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rliA/info/1rliA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rliA/nostruct-align/1rliA.t2k.a2m.gz, have 266355 columns in 1162 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2axiA/nostruct-align/2axiA.t2k.a2m.gz
# 2axiA.t2k.a2m with 87 sequences, total weight= 3.81336 avg weight= 0.0438317 17 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2axiA/info/2axiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2axiA/nostruct-align/2axiA.t2k.a2m.gz, have 266447 columns in 1163 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1moq/nostruct-align/1moq.t2k.a2m.gz
# 1moq.t2k.a2m with 505 sequences, total weight= 225.861 avg weight= 0.44725 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30555 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1moq/info/1moq.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1moq/nostruct-align/1moq.t2k.a2m.gz, have 266813 columns in 1164 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2iacA/nostruct-align/2iacA.t2k.a2m.gz
# 2iacA.t2k.a2m with 336 sequences, total weight= 67.9498 avg weight= 0.202232 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30061 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2iacA/info/2iacA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2iacA/nostruct-align/2iacA.t2k.a2m.gz, have 266945 columns in 1165 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e7lA/nostruct-align/1e7lA.t2k.a2m.gz
# 1e7lA.t2k.a2m with 30 sequences, total weight= 18.1313 avg weight= 0.604378 22 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e7lA/info/1e7lA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1e7lA/nostruct-align/1e7lA.t2k.a2m.gz, have 267102 columns in 1166 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q92A/nostruct-align/1q92A.t2k.a2m.gz
# 1q92A.t2k.a2m with 52 sequences, total weight= 37.2489 avg weight= 0.716325 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q92A/info/1q92A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1q92A/nostruct-align/1q92A.t2k.a2m.gz, have 267297 columns in 1167 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ub3A/nostruct-align/1ub3A.t2k.a2m.gz
# 1ub3A.t2k.a2m with 107 sequences, total weight= 16.2539 avg weight= 0.151906 36 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ub3A/info/1ub3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1ub3A/nostruct-align/1ub3A.t2k.a2m.gz, have 267508 columns in 1168 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1svfA/nostruct-align/1svfA.t2k.a2m.gz
# 1svfA.t2k.a2m with 398 sequences, total weight= 9.40169 avg weight= 0.0236223 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1svfA/info/1svfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1svfA/nostruct-align/1svfA.t2k.a2m.gz, have 267572 columns in 1169 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jyeA/nostruct-align/1jyeA.t2k.a2m.gz
# 1jyeA.t2k.a2m with 566 sequences, total weight= 566 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10802 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jyeA/info/1jyeA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jyeA/nostruct-align/1jyeA.t2k.a2m.gz, have 267843 columns in 1170 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xm3A/nostruct-align/1xm3A.t2k.a2m.gz
# 1xm3A.t2k.a2m with 1034 sequences, total weight= 1034 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17715 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xm3A/info/1xm3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xm3A/nostruct-align/1xm3A.t2k.a2m.gz, have 268087 columns in 1171 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qwoA/nostruct-align/1qwoA.t2k.a2m.gz
# 1qwoA.t2k.a2m with 131 sequences, total weight= 80.987 avg weight= 0.618221 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30033 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qwoA/info/1qwoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qwoA/nostruct-align/1qwoA.t2k.a2m.gz, have 268522 columns in 1172 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lst/nostruct-align/1lst.t2k.a2m.gz
# 1lst.t2k.a2m with 340 sequences, total weight= 340 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2334 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lst/info/1lst.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lst/nostruct-align/1lst.t2k.a2m.gz, have 268760 columns in 1173 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2e/2eu9A/nostruct-align/2eu9A.t2k.a2m.gz
# 2eu9A.t2k.a2m with 20295 sequences, total weight= 20295 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.027 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2e/2eu9A/info/2eu9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2e/2eu9A/nostruct-align/2eu9A.t2k.a2m.gz, have 269105 columns in 1174 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2i6hA/nostruct-align/2i6hA.t2k.a2m.gz
# 2i6hA.t2k.a2m with 179 sequences, total weight= 21.437 avg weight= 0.119759 44 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2i6hA/info/2i6hA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2i6hA/nostruct-align/2i6hA.t2k.a2m.gz, have 269284 columns in 1175 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xtaA/nostruct-align/1xtaA.t2k.a2m.gz
# 1xtaA.t2k.a2m with 792 sequences, total weight= 792 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28026 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xtaA/info/1xtaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xtaA/nostruct-align/1xtaA.t2k.a2m.gz, have 269504 columns in 1176 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wmdA/nostruct-align/1wmdA.t2k.a2m.gz
# 1wmdA.t2k.a2m with 1205 sequences, total weight= 1205 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13506 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wmdA/info/1wmdA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wmdA/nostruct-align/1wmdA.t2k.a2m.gz, have 269938 columns in 1177 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k1eA/nostruct-align/1k1eA.t2k.a2m.gz
# 1k1eA.t2k.a2m with 406 sequences, total weight= 151.372 avg weight= 0.372837 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30174 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k1eA/info/1k1eA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1k1eA/nostruct-align/1k1eA.t2k.a2m.gz, have 270115 columns in 1178 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/19/19hcA/nostruct-align/19hcA.t2k.a2m.gz
# 19hcA.t2k.a2m with 205 sequences, total weight= 205 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.873826 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/19/19hcA/info/19hcA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/19/19hcA/nostruct-align/19hcA.t2k.a2m.gz, have 270407 columns in 1179 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g66A/nostruct-align/1g66A.t2k.a2m.gz
# 1g66A.t2k.a2m with 73 sequences, total weight= 26.1304 avg weight= 0.35795 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g66A/info/1g66A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1g66A/nostruct-align/1g66A.t2k.a2m.gz, have 270614 columns in 1180 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wmzA/nostruct-align/1wmzA.t2k.a2m.gz
# 1wmzA.t2k.a2m with 1838 sequences, total weight= 1838 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1167 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wmzA/info/1wmzA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wmzA/nostruct-align/1wmzA.t2k.a2m.gz, have 270754 columns in 1181 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1ff4A/nostruct-align/1ff4A.t2k.a2m.gz
# 1ff4A.t2k.a2m with 380 sequences, total weight= 25.0776 avg weight= 0.0659937 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1ff4A/info/1ff4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1ff4A/nostruct-align/1ff4A.t2k.a2m.gz, have 270819 columns in 1182 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i0rA/nostruct-align/1i0rA.t2k.a2m.gz
# 1i0rA.t2k.a2m with 227 sequences, total weight= 86.0967 avg weight= 0.379281 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3005 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i0rA/info/1i0rA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1i0rA/nostruct-align/1i0rA.t2k.a2m.gz, have 270980 columns in 1183 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nbuA/nostruct-align/1nbuA.t2k.a2m.gz
# 1nbuA.t2k.a2m with 151 sequences, total weight= 27.7959 avg weight= 0.184079 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nbuA/info/1nbuA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nbuA/nostruct-align/1nbuA.t2k.a2m.gz, have 271098 columns in 1184 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y6vA/nostruct-align/1y6vA.t2k.a2m.gz
# 1y6vA.t2k.a2m with 396 sequences, total weight= 122.515 avg weight= 0.309382 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30214 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y6vA/info/1y6vA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1y6vA/nostruct-align/1y6vA.t2k.a2m.gz, have 271547 columns in 1185 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sj1A/nostruct-align/1sj1A.t2k.a2m.gz
# 1sj1A.t2k.a2m with 1065 sequences, total weight= 249.111 avg weight= 0.233907 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31506 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sj1A/info/1sj1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1sj1A/nostruct-align/1sj1A.t2k.a2m.gz, have 271613 columns in 1186 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2f5gA/nostruct-align/2f5gA.t2k.a2m.gz
# 2f5gA.t2k.a2m with 377 sequences, total weight= 52.8478 avg weight= 0.14018 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2f5gA/info/2f5gA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2f5gA/nostruct-align/2f5gA.t2k.a2m.gz, have 271743 columns in 1187 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gtvA/nostruct-align/1gtvA.t2k.a2m.gz
# 1gtvA.t2k.a2m with 246 sequences, total weight= 246 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28617 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gtvA/info/1gtvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gtvA/nostruct-align/1gtvA.t2k.a2m.gz, have 271951 columns in 1188 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bqcA/nostruct-align/1bqcA.t2k.a2m.gz
# 1bqcA.t2k.a2m with 219 sequences, total weight= 205.976 avg weight= 0.94053 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30032 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bqcA/info/1bqcA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1bqcA/nostruct-align/1bqcA.t2k.a2m.gz, have 272253 columns in 1189 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vl1A/nostruct-align/1vl1A.t2k.a2m.gz
# 1vl1A.t2k.a2m with 379 sequences, total weight= 87.3896 avg weight= 0.230579 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30381 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vl1A/info/1vl1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vl1A/nostruct-align/1vl1A.t2k.a2m.gz, have 272471 columns in 1190 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cqmA/nostruct-align/1cqmA.t2k.a2m.gz
# 1cqmA.t2k.a2m with 162 sequences, total weight= 34.5267 avg weight= 0.213128 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cqmA/info/1cqmA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1cqmA/nostruct-align/1cqmA.t2k.a2m.gz, have 272569 columns in 1191 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iktA/nostruct-align/1iktA.t2k.a2m.gz
# 1iktA.t2k.a2m with 136 sequences, total weight= 74.3612 avg weight= 0.546773 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iktA/info/1iktA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1iktA/nostruct-align/1iktA.t2k.a2m.gz, have 272684 columns in 1192 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rhs/nostruct-align/1rhs.t2k.a2m.gz
# 1rhs.t2k.a2m with 237 sequences, total weight= 224.106 avg weight= 0.945597 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rhs/info/1rhs.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rhs/nostruct-align/1rhs.t2k.a2m.gz, have 272977 columns in 1193 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iooA/nostruct-align/1iooA.t2k.a2m.gz
# 1iooA.t2k.a2m with 327 sequences, total weight= 60.9828 avg weight= 0.186492 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30063 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iooA/info/1iooA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1iooA/nostruct-align/1iooA.t2k.a2m.gz, have 273173 columns in 1194 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j8rA/nostruct-align/1j8rA.t2k.a2m.gz
# 1j8rA.t2k.a2m with 25 sequences, total weight= 3.6169 avg weight= 0.144676 17 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j8rA/info/1j8rA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1j8rA/nostruct-align/1j8rA.t2k.a2m.gz, have 273369 columns in 1195 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k3xA/nostruct-align/1k3xA.t2k.a2m.gz
# 1k3xA.t2k.a2m with 196 sequences, total weight= 53.4832 avg weight= 0.272873 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k3xA/info/1k3xA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1k3xA/nostruct-align/1k3xA.t2k.a2m.gz, have 273622 columns in 1196 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gweA/nostruct-align/1gweA.t2k.a2m.gz
# 1gweA.t2k.a2m with 347 sequences, total weight= 21.0711 avg weight= 0.0607235 38 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gweA/info/1gweA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gweA/nostruct-align/1gweA.t2k.a2m.gz, have 274120 columns in 1197 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cchB/nostruct-align/2cchB.t2k.a2m.gz
# 2cchB.t2k.a2m with 1224 sequences, total weight= 1224 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15312 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cchB/info/2cchB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cchB/nostruct-align/2cchB.t2k.a2m.gz, have 274380 columns in 1198 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2ifqA/nostruct-align/2ifqA.t2k.a2m.gz
# 2ifqA.t2k.a2m with 5129 sequences, total weight= 5129 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1974 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2ifqA/info/2ifqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2ifqA/nostruct-align/2ifqA.t2k.a2m.gz, have 274485 columns in 1199 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nvhA/nostruct-align/2nvhA.t2k.a2m.gz
# 2nvhA.t2k.a2m with 236 sequences, total weight= 44.9785 avg weight= 0.190587 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nvhA/info/2nvhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2n/2nvhA/nostruct-align/2nvhA.t2k.a2m.gz, have 274637 columns in 1200 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2ilk/nostruct-align/2ilk.t2k.a2m.gz
# 2ilk.t2k.a2m with 99 sequences, total weight= 20.6424 avg weight= 0.208509 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2ilk/info/2ilk.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2ilk/nostruct-align/2ilk.t2k.a2m.gz, have 274792 columns in 1201 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h2eA/nostruct-align/1h2eA.t2k.a2m.gz
# 1h2eA.t2k.a2m with 458 sequences, total weight= 458 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18909 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h2eA/info/1h2eA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h2eA/nostruct-align/1h2eA.t2k.a2m.gz, have 274999 columns in 1202 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w2fA/nostruct-align/1w2fA.t2k.a2m.gz
# 1w2fA.t2k.a2m with 141 sequences, total weight= 23.9887 avg weight= 0.170133 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w2fA/info/1w2fA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w2fA/nostruct-align/1w2fA.t2k.a2m.gz, have 275275 columns in 1203 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2as0A/nostruct-align/2as0A.t2k.a2m.gz
# 2as0A.t2k.a2m with 1805 sequences, total weight= 1805 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.966312 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2as0A/info/2as0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2as0A/nostruct-align/2as0A.t2k.a2m.gz, have 275671 columns in 1204 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qusA/nostruct-align/1qusA.t2k.a2m.gz
# 1qusA.t2k.a2m with 124 sequences, total weight= 33.5767 avg weight= 0.27078 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qusA/info/1qusA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qusA/nostruct-align/1qusA.t2k.a2m.gz, have 275983 columns in 1205 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nszA/nostruct-align/2nszA.t2k.a2m.gz
# 2nszA.t2k.a2m with 296 sequences, total weight= 71.7419 avg weight= 0.242371 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30101 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nszA/info/2nszA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2n/2nszA/nostruct-align/2nszA.t2k.a2m.gz, have 276112 columns in 1206 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lu0A/nostruct-align/1lu0A.t2k.a2m.gz
# 1lu0A.t2k.a2m with 54 sequences, total weight= 2.56215 avg weight= 0.0474472 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lu0A/info/1lu0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lu0A/nostruct-align/1lu0A.t2k.a2m.gz, have 276141 columns in 1207 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mc2A/nostruct-align/1mc2A.t2k.a2m.gz
# 1mc2A.t2k.a2m with 425 sequences, total weight= 16.6741 avg weight= 0.0392331 44 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mc2A/info/1mc2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mc2A/nostruct-align/1mc2A.t2k.a2m.gz, have 276263 columns in 1208 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y9iA/nostruct-align/1y9iA.t2k.a2m.gz
# 1y9iA.t2k.a2m with 59 sequences, total weight= 16.4277 avg weight= 0.278436 32 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y9iA/info/1y9iA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1y9iA/nostruct-align/1y9iA.t2k.a2m.gz, have 276422 columns in 1209 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oe8A/nostruct-align/1oe8A.t2k.a2m.gz
# 1oe8A.t2k.a2m with 679 sequences, total weight= 679 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2594 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oe8A/info/1oe8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oe8A/nostruct-align/1oe8A.t2k.a2m.gz, have 276626 columns in 1210 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2acoA/nostruct-align/2acoA.t2k.a2m.gz
# 2acoA.t2k.a2m with 447 sequences, total weight= 447 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2186 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2acoA/info/2acoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2acoA/nostruct-align/2acoA.t2k.a2m.gz, have 276794 columns in 1211 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1flmA/nostruct-align/1flmA.t2k.a2m.gz
# 1flmA.t2k.a2m with 11 sequences, total weight= 4.44351 avg weight= 0.403956 18 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1flmA/info/1flmA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1flmA/nostruct-align/1flmA.t2k.a2m.gz, have 276916 columns in 1212 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1juvA/nostruct-align/1juvA.t2k.a2m.gz
# 1juvA.t2k.a2m with 296 sequences, total weight= 78.5744 avg weight= 0.265454 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1juvA/info/1juvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1juvA/nostruct-align/1juvA.t2k.a2m.gz, have 277109 columns in 1213 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fl4A/nostruct-align/2fl4A.t2k.a2m.gz
# 2fl4A.t2k.a2m with 2213 sequences, total weight= 2213 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.933365 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fl4A/info/2fl4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fl4A/nostruct-align/2fl4A.t2k.a2m.gz, have 277256 columns in 1214 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r8nA/nostruct-align/1r8nA.t2k.a2m.gz
# 1r8nA.t2k.a2m with 235 sequences, total weight= 55.7151 avg weight= 0.237086 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r8nA/info/1r8nA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r8nA/nostruct-align/1r8nA.t2k.a2m.gz, have 277441 columns in 1215 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1unqA/nostruct-align/1unqA.t2k.a2m.gz
# 1unqA.t2k.a2m with 728 sequences, total weight= 728 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22724 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1unqA/info/1unqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1unqA/nostruct-align/1unqA.t2k.a2m.gz, have 277558 columns in 1216 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g4yB/nostruct-align/1g4yB.t2k.a2m.gz
# 1g4yB.t2k.a2m with 57 sequences, total weight= 5.3217 avg weight= 0.0933632 19 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g4yB/info/1g4yB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1g4yB/nostruct-align/1g4yB.t2k.a2m.gz, have 277639 columns in 1217 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tzpA/nostruct-align/1tzpA.t2k.a2m.gz
# 1tzpA.t2k.a2m with 39 sequences, total weight= 6.1349 avg weight= 0.157305 27 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tzpA/info/1tzpA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tzpA/nostruct-align/1tzpA.t2k.a2m.gz, have 277879 columns in 1218 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2c42A/nostruct-align/2c42A.t2k.a2m.gz
# 2c42A.t2k.a2m with 1994 sequences, total weight= 1994 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2651 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2c42A/info/2c42A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2c42A/nostruct-align/2c42A.t2k.a2m.gz, have 279110 columns in 1219 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1us0A/nostruct-align/1us0A.t2k.a2m.gz
# 1us0A.t2k.a2m with 1453 sequences, total weight= 288.488 avg weight= 0.198546 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31973 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1us0A/info/1us0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1us0A/nostruct-align/1us0A.t2k.a2m.gz, have 279423 columns in 1220 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p9aG/nostruct-align/1p9aG.t2k.a2m.gz
# 1p9aG.t2k.a2m with 4540 sequences, total weight= 4540 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p9aG/info/1p9aG.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1p9aG/nostruct-align/1p9aG.t2k.a2m.gz, have 279689 columns in 1221 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kveB/nostruct-align/1kveB.t2k.a2m.gz
# 1kveB.t2k.a2m with 3 sequences, total weight= 1.72277 avg weight= 0.574257 7 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kveB/info/1kveB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kveB/nostruct-align/1kveB.t2k.a2m.gz, have 279766 columns in 1222 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2g0wA/nostruct-align/2g0wA.t2k.a2m.gz
# 2g0wA.t2k.a2m with 118 sequences, total weight= 118 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18934 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2g0wA/info/2g0wA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2g0wA/nostruct-align/2g0wA.t2k.a2m.gz, have 280041 columns in 1223 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q7eA/nostruct-align/1q7eA.t2k.a2m.gz
# 1q7eA.t2k.a2m with 442 sequences, total weight= 96.5206 avg weight= 0.218372 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30096 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q7eA/info/1q7eA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1q7eA/nostruct-align/1q7eA.t2k.a2m.gz, have 280451 columns in 1224 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hz4A/nostruct-align/1hz4A.t2k.a2m.gz
# 1hz4A.t2k.a2m with 19 sequences, total weight= 7.11776 avg weight= 0.374619 17 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hz4A/info/1hz4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hz4A/nostruct-align/1hz4A.t2k.a2m.gz, have 280817 columns in 1225 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fr3A/nostruct-align/1fr3A.t2k.a2m.gz
# 1fr3A.t2k.a2m with 160 sequences, total weight= 25.9733 avg weight= 0.162333 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fr3A/info/1fr3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fr3A/nostruct-align/1fr3A.t2k.a2m.gz, have 280884 columns in 1226 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2i7cA/nostruct-align/2i7cA.t2k.a2m.gz
# 2i7cA.t2k.a2m with 615 sequences, total weight= 615 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23475 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2i7cA/info/2i7cA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2i7cA/nostruct-align/2i7cA.t2k.a2m.gz, have 281165 columns in 1227 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qe3A/nostruct-align/1qe3A.t2k.a2m.gz
# 1qe3A.t2k.a2m with 733 sequences, total weight= 733 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23302 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qe3A/info/1qe3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qe3A/nostruct-align/1qe3A.t2k.a2m.gz, have 281632 columns in 1228 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lkkA/nostruct-align/1lkkA.t2k.a2m.gz
# 1lkkA.t2k.a2m with 848 sequences, total weight= 86.2259 avg weight= 0.101682 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3049 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lkkA/info/1lkkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lkkA/nostruct-align/1lkkA.t2k.a2m.gz, have 281737 columns in 1229 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2ah6A/nostruct-align/2ah6A.t2k.a2m.gz
# 2ah6A.t2k.a2m with 189 sequences, total weight= 23.9389 avg weight= 0.126661 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2ah6A/info/2ah6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2ah6A/nostruct-align/2ah6A.t2k.a2m.gz, have 281888 columns in 1230 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wouA/nostruct-align/1wouA.t2k.a2m.gz
# 1wouA.t2k.a2m with 178 sequences, total weight= 92.6217 avg weight= 0.520347 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wouA/info/1wouA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wouA/nostruct-align/1wouA.t2k.a2m.gz, have 282007 columns in 1231 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rp0A/nostruct-align/1rp0A.t2k.a2m.gz
# 1rp0A.t2k.a2m with 1576 sequences, total weight= 1576 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.865735 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rp0A/info/1rp0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rp0A/nostruct-align/1rp0A.t2k.a2m.gz, have 282285 columns in 1232 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hi0A/nostruct-align/2hi0A.t2k.a2m.gz
# 2hi0A.t2k.a2m with 2468 sequences, total weight= 2468 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.910883 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hi0A/info/2hi0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hi0A/nostruct-align/2hi0A.t2k.a2m.gz, have 282525 columns in 1233 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i07A/nostruct-align/1i07A.t2k.a2m.gz
# 1i07A.t2k.a2m with 1147 sequences, total weight= 47.8873 avg weight= 0.04175 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30113 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i07A/info/1i07A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1i07A/nostruct-align/1i07A.t2k.a2m.gz, have 282584 columns in 1234 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nvaA/nostruct-align/2nvaA.t2k.a2m.gz
# 2nvaA.t2k.a2m with 1616 sequences, total weight= 1616 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26655 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nvaA/info/2nvaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2n/2nvaA/nostruct-align/2nvaA.t2k.a2m.gz, have 282953 columns in 1235 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nz0A/nostruct-align/1nz0A.t2k.a2m.gz
# 1nz0A.t2k.a2m with 132 sequences, total weight= 47.6268 avg weight= 0.360809 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nz0A/info/1nz0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nz0A/nostruct-align/1nz0A.t2k.a2m.gz, have 283062 columns in 1236 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w7cA/nostruct-align/1w7cA.t2k.a2m.gz
# 1w7cA.t2k.a2m with 274 sequences, total weight= 111.543 avg weight= 0.407092 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30087 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w7cA/info/1w7cA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w7cA/nostruct-align/1w7cA.t2k.a2m.gz, have 283798 columns in 1237 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bogX/nostruct-align/2bogX.t2k.a2m.gz
# 2bogX.t2k.a2m with 118 sequences, total weight= 32.0816 avg weight= 0.271878 44 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bogX/info/2bogX.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bogX/nostruct-align/2bogX.t2k.a2m.gz, have 284078 columns in 1238 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zw0A/nostruct-align/1zw0A.t2k.a2m.gz
# 1zw0A.t2k.a2m with 11 sequences, total weight= 5.11896 avg weight= 0.46536 15 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zw0A/info/1zw0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zw0A/nostruct-align/1zw0A.t2k.a2m.gz, have 284143 columns in 1239 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kw3B/nostruct-align/1kw3B.t2k.a2m.gz
# 1kw3B.t2k.a2m with 205 sequences, total weight= 149.987 avg weight= 0.731642 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30071 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kw3B/info/1kw3B.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kw3B/nostruct-align/1kw3B.t2k.a2m.gz, have 284431 columns in 1240 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2awkA/nostruct-align/2awkA.t2k.a2m.gz
# 2awkA.t2k.a2m with 501 sequences, total weight= 15.0635 avg weight= 0.0300669 36 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2awkA/info/2awkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2awkA/nostruct-align/2awkA.t2k.a2m.gz, have 284655 columns in 1241 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zodA/nostruct-align/1zodA.t2k.a2m.gz
# 1zodA.t2k.a2m with 3296 sequences, total weight= 1253.61 avg weight= 0.380344 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32533 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zodA/info/1zodA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zodA/nostruct-align/1zodA.t2k.a2m.gz, have 285086 columns in 1242 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yqsA/nostruct-align/1yqsA.t2k.a2m.gz
# 1yqsA.t2k.a2m with 1078 sequences, total weight= 1078 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.99681 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yqsA/info/1yqsA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yqsA/nostruct-align/1yqsA.t2k.a2m.gz, have 285431 columns in 1243 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fas/nostruct-align/1fas.t2k.a2m.gz
# 1fas.t2k.a2m with 327 sequences, total weight= 20.999 avg weight= 0.0642171 41 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fas/info/1fas.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fas/nostruct-align/1fas.t2k.a2m.gz, have 285492 columns in 1244 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2dekA/nostruct-align/2dekA.t2k.a2m.gz
# 2dekA.t2k.a2m with 384 sequences, total weight= 384 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27787 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2dekA/info/2dekA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2dekA/nostruct-align/2dekA.t2k.a2m.gz, have 285757 columns in 1245 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oi2A/nostruct-align/1oi2A.t2k.a2m.gz
# 1oi2A.t2k.a2m with 99 sequences, total weight= 11.1572 avg weight= 0.112699 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oi2A/info/1oi2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oi2A/nostruct-align/1oi2A.t2k.a2m.gz, have 286093 columns in 1246 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2br9A/nostruct-align/2br9A.t2k.a2m.gz
# 2br9A.t2k.a2m with 507 sequences, total weight= 17.0735 avg weight= 0.0336756 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2br9A/info/2br9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2br9A/nostruct-align/2br9A.t2k.a2m.gz, have 286323 columns in 1247 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gudA/nostruct-align/1gudA.t2k.a2m.gz
# 1gudA.t2k.a2m with 769 sequences, total weight= 769 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01209 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gudA/info/1gudA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gudA/nostruct-align/1gudA.t2k.a2m.gz, have 286611 columns in 1248 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b6a/nostruct-align/1b6a.t2k.a2m.gz
# 1b6a.t2k.a2m with 392 sequences, total weight= 147.673 avg weight= 0.376717 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30147 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b6a/info/1b6a.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1b6a/nostruct-align/1b6a.t2k.a2m.gz, have 286966 columns in 1249 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j09A/nostruct-align/1j09A.t2k.a2m.gz
# 1j09A.t2k.a2m with 313 sequences, total weight= 76.3194 avg weight= 0.243832 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30095 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j09A/info/1j09A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1j09A/nostruct-align/1j09A.t2k.a2m.gz, have 287434 columns in 1250 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3v/3vub/nostruct-align/3vub.t2k.a2m.gz
# 3vub.t2k.a2m with 21 sequences, total weight= 5.1754 avg weight= 0.246447 18 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3v/3vub/info/3vub.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/3v/3vub/nostruct-align/3vub.t2k.a2m.gz, have 287535 columns in 1251 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rweA/nostruct-align/1rweA.t2k.a2m.gz
# 1rweA.t2k.a2m with 174 sequences, total weight= 2.46285 avg weight= 0.0141543 20 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rweA/info/1rweA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rweA/nostruct-align/1rweA.t2k.a2m.gz, have 287556 columns in 1252 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ew4A/nostruct-align/1ew4A.t2k.a2m.gz
# 1ew4A.t2k.a2m with 61 sequences, total weight= 13.4164 avg weight= 0.219941 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ew4A/info/1ew4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1ew4A/nostruct-align/1ew4A.t2k.a2m.gz, have 287662 columns in 1253 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1smbA/nostruct-align/1smbA.t2k.a2m.gz
# 1smbA.t2k.a2m with 516 sequences, total weight= 130.716 avg weight= 0.253326 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30548 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1smbA/info/1smbA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1smbA/nostruct-align/1smbA.t2k.a2m.gz, have 287811 columns in 1254 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t82A/nostruct-align/1t82A.t2k.a2m.gz
# 1t82A.t2k.a2m with 25 sequences, total weight= 9.21463 avg weight= 0.368585 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t82A/info/1t82A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1t82A/nostruct-align/1t82A.t2k.a2m.gz, have 287954 columns in 1255 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y1pA/nostruct-align/1y1pA.t2k.a2m.gz
# 1y1pA.t2k.a2m with 3368 sequences, total weight= 3368 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.934663 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y1pA/info/1y1pA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1y1pA/nostruct-align/1y1pA.t2k.a2m.gz, have 288296 columns in 1256 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f7dA/nostruct-align/1f7dA.t2k.a2m.gz
# 1f7dA.t2k.a2m with 592 sequences, total weight= 153.513 avg weight= 0.259312 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30093 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f7dA/info/1f7dA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1f7dA/nostruct-align/1f7dA.t2k.a2m.gz, have 288414 columns in 1257 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wohA/nostruct-align/1wohA.t2k.a2m.gz
# 1wohA.t2k.a2m with 364 sequences, total weight= 145.274 avg weight= 0.399105 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30244 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wohA/info/1wohA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wohA/nostruct-align/1wohA.t2k.a2m.gz, have 288717 columns in 1258 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2ox7A/nostruct-align/2ox7A.t2k.a2m.gz
# 2ox7A.t2k.a2m with 71 sequences, total weight= 71 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11241 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2ox7A/info/2ox7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2ox7A/nostruct-align/2ox7A.t2k.a2m.gz, have 288861 columns in 1259 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pmhX/nostruct-align/1pmhX.t2k.a2m.gz
# 1pmhX.t2k.a2m with 12 sequences, total weight= 6.00792 avg weight= 0.50066 15 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pmhX/info/1pmhX.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pmhX/nostruct-align/1pmhX.t2k.a2m.gz, have 289044 columns in 1260 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yv4A/nostruct-align/1yv4A.t2k.a2m.gz
# 1yv4A.t2k.a2m with 421 sequences, total weight= 15.6228 avg weight= 0.0371088 39 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yv4A/info/1yv4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yv4A/nostruct-align/1yv4A.t2k.a2m.gz, have 289148 columns in 1261 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2iiaA/nostruct-align/2iiaA.t2k.a2m.gz
# 2iiaA.t2k.a2m with 21 sequences, total weight= 5.49399 avg weight= 0.261618 20 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2iiaA/info/2iiaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2iiaA/nostruct-align/2iiaA.t2k.a2m.gz, have 289237 columns in 1262 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bkpA/nostruct-align/1bkpA.t2k.a2m.gz
# 1bkpA.t2k.a2m with 324 sequences, total weight= 31.099 avg weight= 0.0959845 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bkpA/info/1bkpA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1bkpA/nostruct-align/1bkpA.t2k.a2m.gz, have 289515 columns in 1263 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nnxA/nostruct-align/1nnxA.t2k.a2m.gz
# 1nnxA.t2k.a2m with 40 sequences, total weight= 12.0262 avg weight= 0.300655 30 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nnxA/info/1nnxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nnxA/nostruct-align/1nnxA.t2k.a2m.gz, have 289608 columns in 1264 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fm0D/nostruct-align/1fm0D.t2k.a2m.gz
# 1fm0D.t2k.a2m with 135 sequences, total weight= 38.1199 avg weight= 0.28237 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fm0D/info/1fm0D.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fm0D/nostruct-align/1fm0D.t2k.a2m.gz, have 289689 columns in 1265 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1krhA/nostruct-align/1krhA.t2k.a2m.gz
# 1krhA.t2k.a2m with 822 sequences, total weight= 822 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22827 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1krhA/info/1krhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1krhA/nostruct-align/1krhA.t2k.a2m.gz, have 290026 columns in 1266 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cl5A/nostruct-align/2cl5A.t2k.a2m.gz
# 2cl5A.t2k.a2m with 818 sequences, total weight= 818 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11911 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cl5A/info/2cl5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cl5A/nostruct-align/2cl5A.t2k.a2m.gz, have 290240 columns in 1267 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oksA/nostruct-align/1oksA.t2k.a2m.gz
# 1oksA.t2k.a2m with 47 sequences, total weight= 3.54279 avg weight= 0.0753785 16 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oksA/info/1oksA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oksA/nostruct-align/1oksA.t2k.a2m.gz, have 290293 columns in 1268 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fd4A/nostruct-align/2fd4A.t2k.a2m.gz
# 2fd4A.t2k.a2m with 12 sequences, total weight= 2.8473 avg weight= 0.237275 12 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fd4A/info/2fd4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fd4A/nostruct-align/2fd4A.t2k.a2m.gz, have 290398 columns in 1269 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2aqjA/nostruct-align/2aqjA.t2k.a2m.gz
# 2aqjA.t2k.a2m with 623 sequences, total weight= 623 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03986 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2aqjA/info/2aqjA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2aqjA/nostruct-align/2aqjA.t2k.a2m.gz, have 290915 columns in 1270 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zuyA/nostruct-align/1zuyA.t2k.a2m.gz
# 1zuyA.t2k.a2m with 32 sequences, total weight= 7.25727 avg weight= 0.22679 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zuyA/info/1zuyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zuyA/nostruct-align/1zuyA.t2k.a2m.gz, have 290973 columns in 1271 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fcbA/nostruct-align/2fcbA.t2k.a2m.gz
# 2fcbA.t2k.a2m with 2027 sequences, total weight= 2027 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01407 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fcbA/info/2fcbA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fcbA/nostruct-align/2fcbA.t2k.a2m.gz, have 291146 columns in 1272 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gsoA/nostruct-align/2gsoA.t2k.a2m.gz
# 2gsoA.t2k.a2m with 1099 sequences, total weight= 1099 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.920388 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gsoA/info/2gsoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gsoA/nostruct-align/2gsoA.t2k.a2m.gz, have 291528 columns in 1273 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iq6A/nostruct-align/1iq6A.t2k.a2m.gz
# 1iq6A.t2k.a2m with 260 sequences, total weight= 260 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27081 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iq6A/info/1iq6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1iq6A/nostruct-align/1iq6A.t2k.a2m.gz, have 291660 columns in 1274 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2arcA/nostruct-align/2arcA.t2k.a2m.gz
# 2arcA.t2k.a2m with 37 sequences, total weight= 19.9102 avg weight= 0.538114 26 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2arcA/info/2arcA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2arcA/nostruct-align/2arcA.t2k.a2m.gz, have 291821 columns in 1275 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v05A/nostruct-align/1v05A.t2k.a2m.gz
# 1v05A.t2k.a2m with 556 sequences, total weight= 71.9328 avg weight= 0.129375 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30085 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v05A/info/1v05A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v05A/nostruct-align/1v05A.t2k.a2m.gz, have 291917 columns in 1276 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nfp/nostruct-align/1nfp.t2k.a2m.gz
# 1nfp.t2k.a2m with 56 sequences, total weight= 23.1247 avg weight= 0.412942 31 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nfp/info/1nfp.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nfp/nostruct-align/1nfp.t2k.a2m.gz, have 292145 columns in 1277 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wzaA/nostruct-align/1wzaA.t2k.a2m.gz
# 1wzaA.t2k.a2m with 3777 sequences, total weight= 3777 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.952102 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wzaA/info/1wzaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wzaA/nostruct-align/1wzaA.t2k.a2m.gz, have 292633 columns in 1278 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pq1B/nostruct-align/1pq1B.t2k.a2m.gz
# 1pq1B.t2k.a2m with 13 sequences, total weight= 2.2026 avg weight= 0.169431 8 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pq1B/info/1pq1B.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pq1B/nostruct-align/1pq1B.t2k.a2m.gz, have 292666 columns in 1279 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zxtA/nostruct-align/1zxtA.t2k.a2m.gz
# 1zxtA.t2k.a2m with 422 sequences, total weight= 43.4886 avg weight= 0.103054 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zxtA/info/1zxtA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zxtA/nostruct-align/1zxtA.t2k.a2m.gz, have 292735 columns in 1280 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eca/nostruct-align/1eca.t2k.a2m.gz
# 1eca.t2k.a2m with 467 sequences, total weight= 67.6703 avg weight= 0.144904 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30243 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eca/info/1eca.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1eca/nostruct-align/1eca.t2k.a2m.gz, have 292871 columns in 1281 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2e/2ew0A/nostruct-align/2ew0A.t2k.a2m.gz
# 2ew0A.t2k.a2m with 228 sequences, total weight= 31.9457 avg weight= 0.140113 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2e/2ew0A/info/2ew0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2e/2ew0A/nostruct-align/2ew0A.t2k.a2m.gz, have 293046 columns in 1282 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h6fA/nostruct-align/1h6fA.t2k.a2m.gz
# 1h6fA.t2k.a2m with 304 sequences, total weight= 15.3053 avg weight= 0.0503464 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h6fA/info/1h6fA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h6fA/nostruct-align/1h6fA.t2k.a2m.gz, have 293230 columns in 1283 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1ja1A/nostruct-align/1ja1A.t2k.a2m.gz
# 1ja1A.t2k.a2m with 437 sequences, total weight= 186.642 avg weight= 0.427099 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30223 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1ja1A/info/1ja1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1ja1A/nostruct-align/1ja1A.t2k.a2m.gz, have 293846 columns in 1284 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p80A/nostruct-align/1p80A.t2k.a2m.gz
# 1p80A.t2k.a2m with 470 sequences, total weight= 42.4611 avg weight= 0.0903428 44 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p80A/info/1p80A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1p80A/nostruct-align/1p80A.t2k.a2m.gz, have 294573 columns in 1285 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wnaA/nostruct-align/1wnaA.t2k.a2m.gz
# 1wnaA.t2k.a2m with 5 sequences, total weight= 3.47312 avg weight= 0.694625 12 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wnaA/info/1wnaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wnaA/nostruct-align/1wnaA.t2k.a2m.gz, have 294700 columns in 1286 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2g8sA/nostruct-align/2g8sA.t2k.a2m.gz
# 2g8sA.t2k.a2m with 536 sequences, total weight= 536 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22089 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2g8sA/info/2g8sA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2g8sA/nostruct-align/2g8sA.t2k.a2m.gz, have 295048 columns in 1287 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bcmA/nostruct-align/2bcmA.t2k.a2m.gz
# 2bcmA.t2k.a2m with 16 sequences, total weight= 5.40364 avg weight= 0.337727 18 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bcmA/info/2bcmA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bcmA/nostruct-align/2bcmA.t2k.a2m.gz, have 295186 columns in 1288 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gciA/nostruct-align/2gciA.t2k.a2m.gz
# 2gciA.t2k.a2m with 2004 sequences, total weight= 161.395 avg weight= 0.0805365 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31821 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gciA/info/2gciA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gciA/nostruct-align/2gciA.t2k.a2m.gz, have 295540 columns in 1289 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yqdA/nostruct-align/1yqdA.t2k.a2m.gz
# 1yqdA.t2k.a2m with 4582 sequences, total weight= 4582 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21932 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yqdA/info/1yqdA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yqdA/nostruct-align/1yqdA.t2k.a2m.gz, have 295899 columns in 1290 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2j73A/nostruct-align/2j73A.t2k.a2m.gz
# 2j73A.t2k.a2m with 75 sequences, total weight= 40.0597 avg weight= 0.534129 44 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2j73A/info/2j73A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2j73A/nostruct-align/2j73A.t2k.a2m.gz, have 296002 columns in 1291 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fulA/nostruct-align/2fulA.t2k.a2m.gz
# 2fulA.t2k.a2m with 145 sequences, total weight= 145 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18901 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fulA/info/2fulA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fulA/nostruct-align/2fulA.t2k.a2m.gz, have 296163 columns in 1292 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r1gA/nostruct-align/1r1gA.t2k.a2m.gz
# 1r1gA.t2k.a2m with 3 sequences, total weight= 1.74067 avg weight= 0.580223 9 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r1gA/info/1r1gA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r1gA/nostruct-align/1r1gA.t2k.a2m.gz, have 296194 columns in 1293 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m2dA/nostruct-align/1m2dA.t2k.a2m.gz
# 1m2dA.t2k.a2m with 139 sequences, total weight= 94.1204 avg weight= 0.677125 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m2dA/info/1m2dA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m2dA/nostruct-align/1m2dA.t2k.a2m.gz, have 296295 columns in 1294 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2g64A/nostruct-align/2g64A.t2k.a2m.gz
# 2g64A.t2k.a2m with 372 sequences, total weight= 135.695 avg weight= 0.364773 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30063 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2g64A/info/2g64A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2g64A/nostruct-align/2g64A.t2k.a2m.gz, have 296435 columns in 1295 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m7gA/nostruct-align/1m7gA.t2k.a2m.gz
# 1m7gA.t2k.a2m with 194 sequences, total weight= 23.6699 avg weight= 0.12201 41 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m7gA/info/1m7gA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m7gA/nostruct-align/1m7gA.t2k.a2m.gz, have 296643 columns in 1296 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bjiA/nostruct-align/2bjiA.t2k.a2m.gz
# 2bjiA.t2k.a2m with 734 sequences, total weight= 734 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27727 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bjiA/info/2bjiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bjiA/nostruct-align/2bjiA.t2k.a2m.gz, have 296917 columns in 1297 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f46A/nostruct-align/1f46A.t2k.a2m.gz
# 1f46A.t2k.a2m with 45 sequences, total weight= 13.1125 avg weight= 0.291389 29 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f46A/info/1f46A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1f46A/nostruct-align/1f46A.t2k.a2m.gz, have 297056 columns in 1298 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tu9A/nostruct-align/1tu9A.t2k.a2m.gz
# 1tu9A.t2k.a2m with 49 sequences, total weight= 26.3668 avg weight= 0.538098 30 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tu9A/info/1tu9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tu9A/nostruct-align/1tu9A.t2k.a2m.gz, have 297187 columns in 1299 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ru4A/nostruct-align/1ru4A.t2k.a2m.gz
# 1ru4A.t2k.a2m with 270 sequences, total weight= 270 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.997262 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ru4A/info/1ru4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1ru4A/nostruct-align/1ru4A.t2k.a2m.gz, have 297587 columns in 1300 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m33A/nostruct-align/1m33A.t2k.a2m.gz
# 1m33A.t2k.a2m with 1361 sequences, total weight= 1361 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.839149 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m33A/info/1m33A.stride-mixed.strand_sep
WARNING: skipping h, since it is lower case.
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m33A/nostruct-align/1m33A.t2k.a2m.gz, have 297842 columns in 1301 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1igqA/nostruct-align/1igqA.t2k.a2m.gz
# 1igqA.t2k.a2m with 20 sequences, total weight= 3.19208 avg weight= 0.159604 14 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1igqA/info/1igqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1igqA/nostruct-align/1igqA.t2k.a2m.gz, have 297896 columns in 1302 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hdoA/nostruct-align/2hdoA.t2k.a2m.gz
# 2hdoA.t2k.a2m with 2383 sequences, total weight= 2383 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04976 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hdoA/info/2hdoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hdoA/nostruct-align/2hdoA.t2k.a2m.gz, have 298103 columns in 1303 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w70A/nostruct-align/1w70A.t2k.a2m.gz
# 1w70A.t2k.a2m with 2769 sequences, total weight= 42.6569 avg weight= 0.0154052 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30091 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w70A/info/1w70A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w70A/nostruct-align/1w70A.t2k.a2m.gz, have 298163 columns in 1304 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o98A/nostruct-align/1o98A.t2k.a2m.gz
# 1o98A.t2k.a2m with 238 sequences, total weight= 222.605 avg weight= 0.935314 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o98A/info/1o98A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1o98A/nostruct-align/1o98A.t2k.a2m.gz, have 298672 columns in 1305 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2oebA/nostruct-align/2oebA.t2k.a2m.gz
# 2oebA.t2k.a2m with 20 sequences, total weight= 20 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12776 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2oebA/info/2oebA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2oebA/nostruct-align/2oebA.t2k.a2m.gz, have 298824 columns in 1306 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qnrA/nostruct-align/1qnrA.t2k.a2m.gz
# 1qnrA.t2k.a2m with 153 sequences, total weight= 153 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05877 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qnrA/info/1qnrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qnrA/nostruct-align/1qnrA.t2k.a2m.gz, have 299168 columns in 1307 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3p/3pviA/nostruct-align/3pviA.t2k.a2m.gz
# 3pviA.t2k.a2m with 9 sequences, total weight= 2.39752 avg weight= 0.266392 11 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3p/3pviA/info/3pviA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/3p/3pviA/nostruct-align/3pviA.t2k.a2m.gz, have 299324 columns in 1308 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sh8A/nostruct-align/1sh8A.t2k.a2m.gz
# 1sh8A.t2k.a2m with 137 sequences, total weight= 137 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19237 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sh8A/info/1sh8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1sh8A/nostruct-align/1sh8A.t2k.a2m.gz, have 299477 columns in 1309 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n0wA/nostruct-align/1n0wA.t2k.a2m.gz
# 1n0wA.t2k.a2m with 837 sequences, total weight= 163.74 avg weight= 0.195627 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31268 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n0wA/info/1n0wA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1n0wA/nostruct-align/1n0wA.t2k.a2m.gz, have 299687 columns in 1310 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xknA/nostruct-align/1xknA.t2k.a2m.gz
# 1xknA.t2k.a2m with 96 sequences, total weight= 21.6804 avg weight= 0.225837 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xknA/info/1xknA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xknA/nostruct-align/1xknA.t2k.a2m.gz, have 300040 columns in 1311 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1idpA/nostruct-align/1idpA.t2k.a2m.gz
# 1idpA.t2k.a2m with 20 sequences, total weight= 2.56403 avg weight= 0.128202 12 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1idpA/info/1idpA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1idpA/nostruct-align/1idpA.t2k.a2m.gz, have 300187 columns in 1312 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n7hA/nostruct-align/1n7hA.t2k.a2m.gz
# 1n7hA.t2k.a2m with 1222 sequences, total weight= 1222 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19578 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n7hA/info/1n7hA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1n7hA/nostruct-align/1n7hA.t2k.a2m.gz, have 300518 columns in 1313 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uq5A/nostruct-align/1uq5A.t2k.a2m.gz
# 1uq5A.t2k.a2m with 273 sequences, total weight= 53.9298 avg weight= 0.197545 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uq5A/info/1uq5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uq5A/nostruct-align/1uq5A.t2k.a2m.gz, have 300781 columns in 1314 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nwwA/nostruct-align/1nwwA.t2k.a2m.gz
# 1nwwA.t2k.a2m with 31 sequences, total weight= 31 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17888 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nwwA/info/1nwwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nwwA/nostruct-align/1nwwA.t2k.a2m.gz, have 300926 columns in 1315 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bbkH/nostruct-align/2bbkH.t2k.a2m.gz
# 2bbkH.t2k.a2m with 156 sequences, total weight= 156 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1479 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bbkH/info/2bbkH.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bbkH/nostruct-align/2bbkH.t2k.a2m.gz, have 301281 columns in 1316 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oxjA/nostruct-align/1oxjA.t2k.a2m.gz
# 1oxjA.t2k.a2m with 32 sequences, total weight= 9.83441 avg weight= 0.307325 18 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oxjA/info/1oxjA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oxjA/nostruct-align/1oxjA.t2k.a2m.gz, have 301451 columns in 1317 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rh9A/nostruct-align/1rh9A.t2k.a2m.gz
# 1rh9A.t2k.a2m with 122 sequences, total weight= 122 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14077 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rh9A/info/1rh9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rh9A/nostruct-align/1rh9A.t2k.a2m.gz, have 301821 columns in 1318 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fnuA/nostruct-align/2fnuA.t2k.a2m.gz
# 2fnuA.t2k.a2m with 1367 sequences, total weight= 1367 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04945 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fnuA/info/2fnuA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fnuA/nostruct-align/2fnuA.t2k.a2m.gz, have 302194 columns in 1319 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2d29A/nostruct-align/2d29A.t2k.a2m.gz
# 2d29A.t2k.a2m with 4138 sequences, total weight= 4138 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1763 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2d29A/info/2d29A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2d29A/nostruct-align/2d29A.t2k.a2m.gz, have 302580 columns in 1320 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ybxA/nostruct-align/1ybxA.t2k.a2m.gz
# 1ybxA.t2k.a2m with 217 sequences, total weight= 24.1185 avg weight= 0.111145 42 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ybxA/info/1ybxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1ybxA/nostruct-align/1ybxA.t2k.a2m.gz, have 302671 columns in 1321 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wckA/nostruct-align/1wckA.t2k.a2m.gz
# 1wckA.t2k.a2m with 20 sequences, total weight= 2.46006 avg weight= 0.123003 13 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wckA/info/1wckA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wckA/nostruct-align/1wckA.t2k.a2m.gz, have 302807 columns in 1322 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i6lA/nostruct-align/1i6lA.t2k.a2m.gz
# 1i6lA.t2k.a2m with 349 sequences, total weight= 74.4492 avg weight= 0.213322 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30128 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i6lA/info/1i6lA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1i6lA/nostruct-align/1i6lA.t2k.a2m.gz, have 303133 columns in 1323 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fkkA/nostruct-align/2fkkA.t2k.a2m.gz
# 2fkkA.t2k.a2m with 23 sequences, total weight= 12.4717 avg weight= 0.542246 20 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fkkA/info/2fkkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fkkA/nostruct-align/2fkkA.t2k.a2m.gz, have 303317 columns in 1324 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2d48A/nostruct-align/2d48A.t2k.a2m.gz
# 2d48A.t2k.a2m with 83 sequences, total weight= 9.42532 avg weight= 0.113558 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2d48A/info/2d48A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2d48A/nostruct-align/2d48A.t2k.a2m.gz, have 303446 columns in 1325 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2askA/nostruct-align/2askA.t2k.a2m.gz
# 2askA.t2k.a2m with 94 sequences, total weight= 13.7013 avg weight= 0.145759 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2askA/info/2askA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2askA/nostruct-align/2askA.t2k.a2m.gz, have 303547 columns in 1326 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/5r/5rubA/nostruct-align/5rubA.t2k.a2m.gz
# 5rubA.t2k.a2m with 5513 sequences, total weight= 9.56335 avg weight= 0.00173469 30 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/5r/5rubA/info/5rubA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/5r/5rubA/nostruct-align/5rubA.t2k.a2m.gz, have 303983 columns in 1327 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gaxA/nostruct-align/2gaxA.t2k.a2m.gz
# 2gaxA.t2k.a2m with 28 sequences, total weight= 10.2601 avg weight= 0.366431 24 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gaxA/info/2gaxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gaxA/nostruct-align/2gaxA.t2k.a2m.gz, have 304118 columns in 1328 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2jenA/nostruct-align/2jenA.t2k.a2m.gz
# 2jenA.t2k.a2m with 141 sequences, total weight= 87.5057 avg weight= 0.620608 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2jenA/info/2jenA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2jenA/nostruct-align/2jenA.t2k.a2m.gz, have 304351 columns in 1329 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rzhM/nostruct-align/1rzhM.t2k.a2m.gz
# 1rzhM.t2k.a2m with 844 sequences, total weight= 16.1628 avg weight= 0.0191502 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rzhM/info/1rzhM.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rzhM/nostruct-align/1rzhM.t2k.a2m.gz, have 304652 columns in 1330 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2f5tX/nostruct-align/2f5tX.t2k.a2m.gz
# 2f5tX.t2k.a2m with 24 sequences, total weight= 24 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02893 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2f5tX/info/2f5tX.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2f5tX/nostruct-align/2f5tX.t2k.a2m.gz, have 304885 columns in 1331 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2jbaA/nostruct-align/2jbaA.t2k.a2m.gz
# 2jbaA.t2k.a2m with 21052 sequences, total weight= 15509.6 avg weight= 0.736727 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3106 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2jbaA/info/2jbaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2jbaA/nostruct-align/2jbaA.t2k.a2m.gz, have 305010 columns in 1332 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2e/2erbA/nostruct-align/2erbA.t2k.a2m.gz
# 2erbA.t2k.a2m with 221 sequences, total weight= 221 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12504 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2e/2erbA/info/2erbA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2e/2erbA/nostruct-align/2erbA.t2k.a2m.gz, have 305133 columns in 1333 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2o0mA/nostruct-align/2o0mA.t2k.a2m.gz
# 2o0mA.t2k.a2m with 206 sequences, total weight= 69.7668 avg weight= 0.338674 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30167 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2o0mA/info/2o0mA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2o0mA/nostruct-align/2o0mA.t2k.a2m.gz, have 305380 columns in 1334 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t6eX/nostruct-align/1t6eX.t2k.a2m.gz
# 1t6eX.t2k.a2m with 232 sequences, total weight= 170.628 avg weight= 0.735466 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30193 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t6eX/info/1t6eX.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1t6eX/nostruct-align/1t6eX.t2k.a2m.gz, have 305742 columns in 1335 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o08A/nostruct-align/1o08A.t2k.a2m.gz
# 1o08A.t2k.a2m with 702 sequences, total weight= 702 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03199 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o08A/info/1o08A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1o08A/nostruct-align/1o08A.t2k.a2m.gz, have 305963 columns in 1336 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xkzA/nostruct-align/1xkzA.t2k.a2m.gz
# 1xkzA.t2k.a2m with 217 sequences, total weight= 97.3071 avg weight= 0.44842 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3011 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xkzA/info/1xkzA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xkzA/nostruct-align/1xkzA.t2k.a2m.gz, have 306207 columns in 1337 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jbeA/nostruct-align/1jbeA.t2k.a2m.gz
# 1jbeA.t2k.a2m with 2167 sequences, total weight= 570.653 avg weight= 0.263338 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32565 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jbeA/info/1jbeA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jbeA/nostruct-align/1jbeA.t2k.a2m.gz, have 306333 columns in 1338 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w4vA/nostruct-align/1w4vA.t2k.a2m.gz
# 1w4vA.t2k.a2m with 3653 sequences, total weight= 3653 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22005 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w4vA/info/1w4vA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w4vA/nostruct-align/1w4vA.t2k.a2m.gz, have 306443 columns in 1339 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1ci9A/nostruct-align/1ci9A.t2k.a2m.gz
# 1ci9A.t2k.a2m with 538 sequences, total weight= 538 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03169 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1ci9A/info/1ci9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1ci9A/nostruct-align/1ci9A.t2k.a2m.gz, have 306820 columns in 1340 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kqfB/nostruct-align/1kqfB.t2k.a2m.gz
# 1kqfB.t2k.a2m with 846 sequences, total weight= 846 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03151 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kqfB/info/1kqfB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kqfB/nostruct-align/1kqfB.t2k.a2m.gz, have 307109 columns in 1341 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2olgA/nostruct-align/2olgA.t2k.a2m.gz
# 2olgA.t2k.a2m with 6421 sequences, total weight= 6421 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18168 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2olgA/info/2olgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2olgA/nostruct-align/2olgA.t2k.a2m.gz, have 307385 columns in 1342 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oflA/nostruct-align/1oflA.t2k.a2m.gz
# 1oflA.t2k.a2m with 31 sequences, total weight= 31 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16746 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oflA/info/1oflA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oflA/nostruct-align/1oflA.t2k.a2m.gz, have 307866 columns in 1343 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2jekA/nostruct-align/2jekA.t2k.a2m.gz
# 2jekA.t2k.a2m with 61 sequences, total weight= 7.93664 avg weight= 0.130109 27 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2jekA/info/2jekA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2jekA/nostruct-align/2jekA.t2k.a2m.gz, have 308006 columns in 1344 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jwqA/nostruct-align/1jwqA.t2k.a2m.gz
# 1jwqA.t2k.a2m with 267 sequences, total weight= 60.1063 avg weight= 0.225117 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30049 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jwqA/info/1jwqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jwqA/nostruct-align/1jwqA.t2k.a2m.gz, have 308185 columns in 1345 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2dkoA/nostruct-align/2dkoA.t2k.a2m.gz
# 2dkoA.t2k.a2m with 498 sequences, total weight= 52.1669 avg weight= 0.104753 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30045 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2dkoA/info/2dkoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2dkoA/nostruct-align/2dkoA.t2k.a2m.gz, have 308331 columns in 1346 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2heoA/nostruct-align/2heoA.t2k.a2m.gz
# 2heoA.t2k.a2m with 16 sequences, total weight= 4.14104 avg weight= 0.258815 16 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2heoA/info/2heoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2heoA/nostruct-align/2heoA.t2k.a2m.gz, have 308390 columns in 1347 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2g7iA/nostruct-align/2g7iA.t2k.a2m.gz
# 2g7iA.t2k.a2m with 3172 sequences, total weight= 3172 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10282 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2g7iA/info/2g7iA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2g7iA/nostruct-align/2g7iA.t2k.a2m.gz, have 308514 columns in 1348 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2ffuA/nostruct-align/2ffuA.t2k.a2m.gz
# 2ffuA.t2k.a2m with 1299 sequences, total weight= 1299 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12374 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2ffuA/info/2ffuA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2ffuA/nostruct-align/2ffuA.t2k.a2m.gz, have 309008 columns in 1349 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2arrA/nostruct-align/2arrA.t2k.a2m.gz
# 2arrA.t2k.a2m with 1750 sequences, total weight= 513.588 avg weight= 0.293479 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32366 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2arrA/info/2arrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2arrA/nostruct-align/2arrA.t2k.a2m.gz, have 309366 columns in 1350 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dmgA/nostruct-align/1dmgA.t2k.a2m.gz
# 1dmgA.t2k.a2m with 211 sequences, total weight= 58.664 avg weight= 0.278028 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dmgA/info/1dmgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dmgA/nostruct-align/1dmgA.t2k.a2m.gz, have 309538 columns in 1351 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2iwrA/nostruct-align/2iwrA.t2k.a2m.gz
# 2iwrA.t2k.a2m with 2752 sequences, total weight= 293.831 avg weight= 0.10677 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32522 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2iwrA/info/2iwrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2iwrA/nostruct-align/2iwrA.t2k.a2m.gz, have 309714 columns in 1352 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v96A/nostruct-align/1v96A.t2k.a2m.gz
# 1v96A.t2k.a2m with 56 sequences, total weight= 34.516 avg weight= 0.616357 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v96A/info/1v96A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v96A/nostruct-align/1v96A.t2k.a2m.gz, have 309860 columns in 1353 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2o62A/nostruct-align/2o62A.t2k.a2m.gz
# 2o62A.t2k.a2m with 37 sequences, total weight= 35.3623 avg weight= 0.955737 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2o62A/info/2o62A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2o62A/nostruct-align/2o62A.t2k.a2m.gz, have 310129 columns in 1354 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xt5A/nostruct-align/1xt5A.t2k.a2m.gz
# 1xt5A.t2k.a2m with 1954 sequences, total weight= 1954 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.867964 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xt5A/info/1xt5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xt5A/nostruct-align/1xt5A.t2k.a2m.gz, have 310264 columns in 1355 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zceA/nostruct-align/1zceA.t2k.a2m.gz
# 1zceA.t2k.a2m with 109 sequences, total weight= 14.7306 avg weight= 0.135143 31 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zceA/info/1zceA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zceA/nostruct-align/1zceA.t2k.a2m.gz, have 310410 columns in 1356 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1htrB/nostruct-align/1htrB.t2k.a2m.gz
# 1htrB.t2k.a2m with 473 sequences, total weight= 104.295 avg weight= 0.220496 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30458 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1htrB/info/1htrB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1htrB/nostruct-align/1htrB.t2k.a2m.gz, have 310739 columns in 1357 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bl8A/nostruct-align/2bl8A.t2k.a2m.gz
# 2bl8A.t2k.a2m with 13 sequences, total weight= 4.29123 avg weight= 0.330095 16 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bl8A/info/2bl8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bl8A/nostruct-align/2bl8A.t2k.a2m.gz, have 310832 columns in 1358 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yrbA/nostruct-align/1yrbA.t2k.a2m.gz
# 1yrbA.t2k.a2m with 269 sequences, total weight= 124.552 avg weight= 0.463019 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30042 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yrbA/info/1yrbA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yrbA/nostruct-align/1yrbA.t2k.a2m.gz, have 311091 columns in 1359 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ofzA/nostruct-align/1ofzA.t2k.a2m.gz
# 1ofzA.t2k.a2m with 27 sequences, total weight= 27 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27366 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ofzA/info/1ofzA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1ofzA/nostruct-align/1ofzA.t2k.a2m.gz, have 311403 columns in 1360 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gs9A/nostruct-align/1gs9A.t2k.a2m.gz
# 1gs9A.t2k.a2m with 209 sequences, total weight= 36.7521 avg weight= 0.175847 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gs9A/info/1gs9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gs9A/nostruct-align/1gs9A.t2k.a2m.gz, have 311547 columns in 1361 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hqsA/nostruct-align/1hqsA.t2k.a2m.gz
# 1hqsA.t2k.a2m with 407 sequences, total weight= 38.4581 avg weight= 0.0944917 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hqsA/info/1hqsA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hqsA/nostruct-align/1hqsA.t2k.a2m.gz, have 311970 columns in 1362 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1ntyA/nostruct-align/1ntyA.t2k.a2m.gz
# 1ntyA.t2k.a2m with 829 sequences, total weight= 829 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15758 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1ntyA/info/1ntyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1ntyA/nostruct-align/1ntyA.t2k.a2m.gz, have 312275 columns in 1363 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uj8A/nostruct-align/1uj8A.t2k.a2m.gz
# 1uj8A.t2k.a2m with 60 sequences, total weight= 8.65933 avg weight= 0.144322 26 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uj8A/info/1uj8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uj8A/nostruct-align/1uj8A.t2k.a2m.gz, have 312348 columns in 1364 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zkoA/nostruct-align/1zkoA.t2k.a2m.gz
# 1zkoA.t2k.a2m with 336 sequences, total weight= 30.7263 avg weight= 0.0914472 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zkoA/info/1zkoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zkoA/nostruct-align/1zkoA.t2k.a2m.gz, have 312476 columns in 1365 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bd0A/nostruct-align/1bd0A.t2k.a2m.gz
# 1bd0A.t2k.a2m with 255 sequences, total weight= 66.4428 avg weight= 0.26056 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3005 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bd0A/info/1bd0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1bd0A/nostruct-align/1bd0A.t2k.a2m.gz, have 312857 columns in 1366 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ig0A/nostruct-align/1ig0A.t2k.a2m.gz
# 1ig0A.t2k.a2m with 40 sequences, total weight= 23.5997 avg weight= 0.589992 22 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ig0A/info/1ig0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1ig0A/nostruct-align/1ig0A.t2k.a2m.gz, have 313174 columns in 1367 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1ddwA/nostruct-align/1ddwA.t2k.a2m.gz
# 1ddwA.t2k.a2m with 89 sequences, total weight= 5.02178 avg weight= 0.0564244 19 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1ddwA/info/1ddwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1ddwA/nostruct-align/1ddwA.t2k.a2m.gz, have 313285 columns in 1368 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yt3A/nostruct-align/1yt3A.t2k.a2m.gz
# 1yt3A.t2k.a2m with 377 sequences, total weight= 377 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17211 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yt3A/info/1yt3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yt3A/nostruct-align/1yt3A.t2k.a2m.gz, have 313660 columns in 1369 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dljA/nostruct-align/1dljA.t2k.a2m.gz
# 1dljA.t2k.a2m with 427 sequences, total weight= 76.4909 avg weight= 0.179136 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30103 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dljA/info/1dljA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dljA/nostruct-align/1dljA.t2k.a2m.gz, have 314062 columns in 1370 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vmeA/nostruct-align/1vmeA.t2k.a2m.gz
# 1vmeA.t2k.a2m with 477 sequences, total weight= 477 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20147 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vmeA/info/1vmeA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vmeA/nostruct-align/1vmeA.t2k.a2m.gz, have 314463 columns in 1371 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gcuA/nostruct-align/2gcuA.t2k.a2m.gz
# 2gcuA.t2k.a2m with 1568 sequences, total weight= 1568 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16549 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gcuA/info/2gcuA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gcuA/nostruct-align/2gcuA.t2k.a2m.gz, have 314707 columns in 1372 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bdo/nostruct-align/1bdo.t2k.a2m.gz
# 1bdo.t2k.a2m with 457 sequences, total weight= 44.6721 avg weight= 0.0977507 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30056 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bdo/info/1bdo.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1bdo/nostruct-align/1bdo.t2k.a2m.gz, have 314787 columns in 1373 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2b3nA/nostruct-align/2b3nA.t2k.a2m.gz
# 2b3nA.t2k.a2m with 612 sequences, total weight= 612 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22566 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2b3nA/info/2b3nA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2b3nA/nostruct-align/2b3nA.t2k.a2m.gz, have 314942 columns in 1374 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ukkA/nostruct-align/1ukkA.t2k.a2m.gz
# 1ukkA.t2k.a2m with 210 sequences, total weight= 210 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29943 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ukkA/info/1ukkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1ukkA/nostruct-align/1ukkA.t2k.a2m.gz, have 315083 columns in 1375 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bkrA/nostruct-align/1bkrA.t2k.a2m.gz
# 1bkrA.t2k.a2m with 444 sequences, total weight= 54.7778 avg weight= 0.123373 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30081 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bkrA/info/1bkrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1bkrA/nostruct-align/1bkrA.t2k.a2m.gz, have 315191 columns in 1376 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2je6A/nostruct-align/2je6A.t2k.a2m.gz
# 2je6A.t2k.a2m with 1610 sequences, total weight= 1610 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27984 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2je6A/info/2je6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2je6A/nostruct-align/2je6A.t2k.a2m.gz, have 315465 columns in 1377 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t6cA/nostruct-align/1t6cA.t2k.a2m.gz
# 1t6cA.t2k.a2m with 241 sequences, total weight= 164.12 avg weight= 0.680995 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30198 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t6cA/info/1t6cA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1t6cA/nostruct-align/1t6cA.t2k.a2m.gz, have 315771 columns in 1378 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2c0hA/nostruct-align/2c0hA.t2k.a2m.gz
# 2c0hA.t2k.a2m with 78 sequences, total weight= 78 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07271 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2c0hA/info/2c0hA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2c0hA/nostruct-align/2c0hA.t2k.a2m.gz, have 316124 columns in 1379 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2c46A/nostruct-align/2c46A.t2k.a2m.gz
# 2c46A.t2k.a2m with 1053 sequences, total weight= 1053 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07034 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2c46A/info/2c46A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2c46A/nostruct-align/2c46A.t2k.a2m.gz, have 316324 columns in 1380 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x8vA/nostruct-align/1x8vA.t2k.a2m.gz
# 1x8vA.t2k.a2m with 5036 sequences, total weight= 5036 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0503 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x8vA/info/1x8vA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1x8vA/nostruct-align/1x8vA.t2k.a2m.gz, have 316753 columns in 1381 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2axcA/nostruct-align/2axcA.t2k.a2m.gz
# 2axcA.t2k.a2m with 29 sequences, total weight= 14.437 avg weight= 0.497828 20 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2axcA/info/2axcA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2axcA/nostruct-align/2axcA.t2k.a2m.gz, have 316985 columns in 1382 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1ak0/nostruct-align/1ak0.t2k.a2m.gz
# 1ak0.t2k.a2m with 55 sequences, total weight= 36.9735 avg weight= 0.672246 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1ak0/info/1ak0.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1ak0/nostruct-align/1ak0.t2k.a2m.gz, have 317249 columns in 1383 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r8sA/nostruct-align/1r8sA.t2k.a2m.gz
# 1r8sA.t2k.a2m with 3051 sequences, total weight= 3051 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27436 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r8sA/info/1r8sA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r8sA/nostruct-align/1r8sA.t2k.a2m.gz, have 317409 columns in 1384 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q2hA/nostruct-align/1q2hA.t2k.a2m.gz
# 1q2hA.t2k.a2m with 25 sequences, total weight= 5.07239 avg weight= 0.202895 20 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q2hA/info/1q2hA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1q2hA/nostruct-align/1q2hA.t2k.a2m.gz, have 317472 columns in 1385 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nyiA/nostruct-align/2nyiA.t2k.a2m.gz
# 2nyiA.t2k.a2m with 330 sequences, total weight= 330 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15862 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nyiA/info/2nyiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2n/2nyiA/nostruct-align/2nyiA.t2k.a2m.gz, have 317643 columns in 1386 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2oy9A/nostruct-align/2oy9A.t2k.a2m.gz
# 2oy9A.t2k.a2m with 51 sequences, total weight= 8.61132 avg weight= 0.168849 26 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2oy9A/info/2oy9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2oy9A/nostruct-align/2oy9A.t2k.a2m.gz, have 317728 columns in 1387 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rgxA/nostruct-align/1rgxA.t2k.a2m.gz
# 1rgxA.t2k.a2m with 20 sequences, total weight= 3.24738 avg weight= 0.162369 19 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rgxA/info/1rgxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rgxA/nostruct-align/1rgxA.t2k.a2m.gz, have 317817 columns in 1388 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cnzA/nostruct-align/1cnzA.t2k.a2m.gz
# 1cnzA.t2k.a2m with 381 sequences, total weight= 28.4122 avg weight= 0.0745726 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cnzA/info/1cnzA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1cnzA/nostruct-align/1cnzA.t2k.a2m.gz, have 318180 columns in 1389 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k4nA/nostruct-align/1k4nA.t2k.a2m.gz
# 1k4nA.t2k.a2m with 25 sequences, total weight= 5.56466 avg weight= 0.222586 22 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k4nA/info/1k4nA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1k4nA/nostruct-align/1k4nA.t2k.a2m.gz, have 318363 columns in 1390 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gxrA/nostruct-align/1gxrA.t2k.a2m.gz
# 1gxrA.t2k.a2m with 2437 sequences, total weight= 2437 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.873229 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gxrA/info/1gxrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gxrA/nostruct-align/1gxrA.t2k.a2m.gz, have 318698 columns in 1391 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2h88A/nostruct-align/2h88A.t2k.a2m.gz
# 2h88A.t2k.a2m with 1471 sequences, total weight= 751.535 avg weight= 0.510901 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30995 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2h88A/info/2h88A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2h88A/nostruct-align/2h88A.t2k.a2m.gz, have 319310 columns in 1392 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jd0A/nostruct-align/1jd0A.t2k.a2m.gz
# 1jd0A.t2k.a2m with 388 sequences, total weight= 75.6539 avg weight= 0.194984 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3014 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jd0A/info/1jd0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jd0A/nostruct-align/1jd0A.t2k.a2m.gz, have 319570 columns in 1393 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jjfA/nostruct-align/1jjfA.t2k.a2m.gz
# 1jjfA.t2k.a2m with 294 sequences, total weight= 294 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.980569 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jjfA/info/1jjfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jjfA/nostruct-align/1jjfA.t2k.a2m.gz, have 319825 columns in 1394 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nrrA/nostruct-align/2nrrA.t2k.a2m.gz
# 2nrrA.t2k.a2m with 658 sequences, total weight= 25.0426 avg weight= 0.0380587 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nrrA/info/2nrrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2n/2nrrA/nostruct-align/2nrrA.t2k.a2m.gz, have 319964 columns in 1395 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2g1uA/nostruct-align/2g1uA.t2k.a2m.gz
# 2g1uA.t2k.a2m with 1139 sequences, total weight= 1139 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27347 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2g1uA/info/2g1uA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2g1uA/nostruct-align/2g1uA.t2k.a2m.gz, have 320101 columns in 1396 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oqjA/nostruct-align/1oqjA.t2k.a2m.gz
# 1oqjA.t2k.a2m with 79 sequences, total weight= 8.61158 avg weight= 0.109007 27 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oqjA/info/1oqjA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oqjA/nostruct-align/1oqjA.t2k.a2m.gz, have 320191 columns in 1397 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b0uA/nostruct-align/1b0uA.t2k.a2m.gz
# 1b0uA.t2k.a2m with 6696 sequences, total weight= 6696 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22841 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b0uA/info/1b0uA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1b0uA/nostruct-align/1b0uA.t2k.a2m.gz, have 320449 columns in 1398 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2h6fA/nostruct-align/2h6fA.t2k.a2m.gz
# 2h6fA.t2k.a2m with 609 sequences, total weight= 609 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.986808 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2h6fA/info/2h6fA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2h6fA/nostruct-align/2h6fA.t2k.a2m.gz, have 320764 columns in 1399 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2e/2erl/nostruct-align/2erl.t2k.a2m.gz
# 2erl.t2k.a2m with 5 sequences, total weight= 1.67057 avg weight= 0.334113 6 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2e/2erl/info/2erl.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2e/2erl/nostruct-align/2erl.t2k.a2m.gz, have 320804 columns in 1400 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a73A/nostruct-align/1a73A.t2k.a2m.gz
# 1a73A.t2k.a2m with 14 sequences, total weight= 5.86325 avg weight= 0.418804 12 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a73A/info/1a73A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1a73A/nostruct-align/1a73A.t2k.a2m.gz, have 320966 columns in 1401 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hfuA/nostruct-align/1hfuA.t2k.a2m.gz
# 1hfuA.t2k.a2m with 370 sequences, total weight= 370 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25679 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hfuA/info/1hfuA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hfuA/nostruct-align/1hfuA.t2k.a2m.gz, have 321466 columns in 1402 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2imrA/nostruct-align/2imrA.t2k.a2m.gz
# 2imrA.t2k.a2m with 750 sequences, total weight= 750 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19014 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2imrA/info/2imrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2imrA/nostruct-align/2imrA.t2k.a2m.gz, have 321846 columns in 1403 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2acfA/nostruct-align/2acfA.t2k.a2m.gz
# 2acfA.t2k.a2m with 537 sequences, total weight= 120.941 avg weight= 0.225215 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30167 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2acfA/info/2acfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2acfA/nostruct-align/2acfA.t2k.a2m.gz, have 322018 columns in 1404 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2a14A/nostruct-align/2a14A.t2k.a2m.gz
# 2a14A.t2k.a2m with 63 sequences, total weight= 20.0312 avg weight= 0.317955 31 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2a14A/info/2a14A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2a14A/nostruct-align/2a14A.t2k.a2m.gz, have 322275 columns in 1405 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oxxK/nostruct-align/1oxxK.t2k.a2m.gz
# 1oxxK.t2k.a2m with 14956 sequences, total weight= 14591.5 avg weight= 0.975627 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30083 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oxxK/info/1oxxK.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oxxK/nostruct-align/1oxxK.t2k.a2m.gz, have 322627 columns in 1406 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zv9A/nostruct-align/1zv9A.t2k.a2m.gz
# 1zv9A.t2k.a2m with 17 sequences, total weight= 8.13639 avg weight= 0.478611 20 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zv9A/info/1zv9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zv9A/nostruct-align/1zv9A.t2k.a2m.gz, have 322799 columns in 1407 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a6m/nostruct-align/1a6m.t2k.a2m.gz
# 1a6m.t2k.a2m with 1422 sequences, total weight= 72.1939 avg weight= 0.0507693 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30488 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a6m/info/1a6m.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1a6m/nostruct-align/1a6m.t2k.a2m.gz, have 322950 columns in 1408 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2ig6A/nostruct-align/2ig6A.t2k.a2m.gz
# 2ig6A.t2k.a2m with 57 sequences, total weight= 57 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25352 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2ig6A/info/2ig6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2ig6A/nostruct-align/2ig6A.t2k.a2m.gz, have 323093 columns in 1409 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vmhA/nostruct-align/1vmhA.t2k.a2m.gz
# 1vmhA.t2k.a2m with 146 sequences, total weight= 17.2408 avg weight= 0.118088 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vmhA/info/1vmhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vmhA/nostruct-align/1vmhA.t2k.a2m.gz, have 323222 columns in 1410 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2iimA/nostruct-align/2iimA.t2k.a2m.gz
# 2iimA.t2k.a2m with 3993 sequences, total weight= 65.2813 avg weight= 0.0163489 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30247 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2iimA/info/2iimA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2iimA/nostruct-align/2iimA.t2k.a2m.gz, have 323284 columns in 1411 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2g8jA/nostruct-align/2g8jA.t2k.a2m.gz
# 2g8jA.t2k.a2m with 650 sequences, total weight= 650 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27173 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2g8jA/info/2g8jA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2g8jA/nostruct-align/2g8jA.t2k.a2m.gz, have 323606 columns in 1412 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p9hA/nostruct-align/1p9hA.t2k.a2m.gz
# 1p9hA.t2k.a2m with 389 sequences, total weight= 101.503 avg weight= 0.260933 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30061 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p9hA/info/1p9hA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1p9hA/nostruct-align/1p9hA.t2k.a2m.gz, have 323785 columns in 1413 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bw8A/nostruct-align/2bw8A.t2k.a2m.gz
# 2bw8A.t2k.a2m with 99 sequences, total weight= 55.9316 avg weight= 0.564966 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bw8A/info/2bw8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bw8A/nostruct-align/2bw8A.t2k.a2m.gz, have 324011 columns in 1414 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r6wA/nostruct-align/1r6wA.t2k.a2m.gz
# 1r6wA.t2k.a2m with 227 sequences, total weight= 227 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25737 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r6wA/info/1r6wA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r6wA/nostruct-align/1r6wA.t2k.a2m.gz, have 324332 columns in 1415 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u9cA/nostruct-align/1u9cA.t2k.a2m.gz
# 1u9cA.t2k.a2m with 465 sequences, total weight= 465 avg weight= 1 clipped 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u9cA/info/1u9cA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1u9cA/nostruct-align/1u9cA.t2k.a2m.gz, have 324553 columns in 1416 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kptA/nostruct-align/1kptA.t2k.a2m.gz
# 1kptA.t2k.a2m with 14 sequences, total weight= 7.72967 avg weight= 0.552119 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kptA/info/1kptA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kptA/nostruct-align/1kptA.t2k.a2m.gz, have 324658 columns in 1417 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1ns5A/nostruct-align/1ns5A.t2k.a2m.gz
# 1ns5A.t2k.a2m with 80 sequences, total weight= 14.0764 avg weight= 0.175955 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1ns5A/info/1ns5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1ns5A/nostruct-align/1ns5A.t2k.a2m.gz, have 324811 columns in 1418 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mwqA/nostruct-align/1mwqA.t2k.a2m.gz
# 1mwqA.t2k.a2m with 81 sequences, total weight= 31.7436 avg weight= 0.391896 41 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mwqA/info/1mwqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mwqA/nostruct-align/1mwqA.t2k.a2m.gz, have 324911 columns in 1419 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nvmB/nostruct-align/1nvmB.t2k.a2m.gz
# 1nvmB.t2k.a2m with 51 sequences, total weight= 5.07588 avg weight= 0.099527 23 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nvmB/info/1nvmB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nvmB/nostruct-align/1nvmB.t2k.a2m.gz, have 325223 columns in 1420 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nox/nostruct-align/1nox.t2k.a2m.gz
# 1nox.t2k.a2m with 524 sequences, total weight= 524 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10768 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nox/info/1nox.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nox/nostruct-align/1nox.t2k.a2m.gz, have 325423 columns in 1421 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zgyA/nostruct-align/1zgyA.t2k.a2m.gz
# 1zgyA.t2k.a2m with 1887 sequences, total weight= 1887 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2817 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zgyA/info/1zgyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zgyA/nostruct-align/1zgyA.t2k.a2m.gz, have 325695 columns in 1422 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1afwA/nostruct-align/1afwA.t2k.a2m.gz
# 1afwA.t2k.a2m with 443 sequences, total weight= 117.014 avg weight= 0.26414 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3024 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1afwA/info/1afwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1afwA/nostruct-align/1afwA.t2k.a2m.gz, have 326085 columns in 1423 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2olmA/nostruct-align/2olmA.t2k.a2m.gz
# 2olmA.t2k.a2m with 1032 sequences, total weight= 73.7655 avg weight= 0.0714782 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30122 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2olmA/info/2olmA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2olmA/nostruct-align/2olmA.t2k.a2m.gz, have 326218 columns in 1424 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2i7aA/nostruct-align/2i7aA.t2k.a2m.gz
# 2i7aA.t2k.a2m with 472 sequences, total weight= 53.5206 avg weight= 0.113391 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2i7aA/info/2i7aA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2i7aA/nostruct-align/2i7aA.t2k.a2m.gz, have 326375 columns in 1425 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pqhA/nostruct-align/1pqhA.t2k.a2m.gz
# 1pqhA.t2k.a2m with 80 sequences, total weight= 6.63463 avg weight= 0.0829329 28 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pqhA/info/1pqhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pqhA/nostruct-align/1pqhA.t2k.a2m.gz, have 326494 columns in 1426 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fd3A/nostruct-align/1fd3A.t2k.a2m.gz
# 1fd3A.t2k.a2m with 68 sequences, total weight= 6.99175 avg weight= 0.10282 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fd3A/info/1fd3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fd3A/nostruct-align/1fd3A.t2k.a2m.gz, have 326535 columns in 1427 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hqyA/nostruct-align/2hqyA.t2k.a2m.gz
# 2hqyA.t2k.a2m with 48 sequences, total weight= 37.9515 avg weight= 0.790655 38 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hqyA/info/2hqyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hqyA/nostruct-align/2hqyA.t2k.a2m.gz, have 326833 columns in 1428 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2he2A/nostruct-align/2he2A.t2k.a2m.gz
# 2he2A.t2k.a2m with 5419 sequences, total weight= 896.307 avg weight= 0.165401 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.34181 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2he2A/info/2he2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2he2A/nostruct-align/2he2A.t2k.a2m.gz, have 326935 columns in 1429 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2ggcA/nostruct-align/2ggcA.t2k.a2m.gz
# 2ggcA.t2k.a2m with 1850 sequences, total weight= 605.333 avg weight= 0.327207 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31893 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2ggcA/info/2ggcA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2ggcA/nostruct-align/2ggcA.t2k.a2m.gz, have 327198 columns in 1430 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ijqA/nostruct-align/1ijqA.t2k.a2m.gz
# 1ijqA.t2k.a2m with 536 sequences, total weight= 536 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29146 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ijqA/info/1ijqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1ijqA/nostruct-align/1ijqA.t2k.a2m.gz, have 327506 columns in 1431 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1snyA/nostruct-align/1snyA.t2k.a2m.gz
# 1snyA.t2k.a2m with 5133 sequences, total weight= 5133 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2932 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1snyA/info/1snyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1snyA/nostruct-align/1snyA.t2k.a2m.gz, have 327754 columns in 1432 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hhvA/nostruct-align/2hhvA.t2k.a2m.gz
# 2hhvA.t2k.a2m with 1070 sequences, total weight= 1070 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24642 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hhvA/info/2hhvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hhvA/nostruct-align/2hhvA.t2k.a2m.gz, have 328334 columns in 1433 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fs1B/nostruct-align/1fs1B.t2k.a2m.gz
# 1fs1B.t2k.a2m with 161 sequences, total weight= 27.0187 avg weight= 0.167818 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fs1B/info/1fs1B.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fs1B/nostruct-align/1fs1B.t2k.a2m.gz, have 328450 columns in 1434 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jl1A/nostruct-align/1jl1A.t2k.a2m.gz
# 1jl1A.t2k.a2m with 979 sequences, total weight= 69.0142 avg weight= 0.0704946 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30059 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jl1A/info/1jl1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jl1A/nostruct-align/1jl1A.t2k.a2m.gz, have 328602 columns in 1435 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x6oA/nostruct-align/1x6oA.t2k.a2m.gz
# 1x6oA.t2k.a2m with 161 sequences, total weight= 30.0337 avg weight= 0.186545 36 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x6oA/info/1x6oA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1x6oA/nostruct-align/1x6oA.t2k.a2m.gz, have 328745 columns in 1436 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bzlA/nostruct-align/2bzlA.t2k.a2m.gz
# 2bzlA.t2k.a2m with 2245 sequences, total weight= 1634.34 avg weight= 0.72799 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30841 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bzlA/info/2bzlA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bzlA/nostruct-align/2bzlA.t2k.a2m.gz, have 329029 columns in 1437 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bw4A/nostruct-align/2bw4A.t2k.a2m.gz
# 2bw4A.t2k.a2m with 1419 sequences, total weight= 1419 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16955 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bw4A/info/2bw4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bw4A/nostruct-align/2bw4A.t2k.a2m.gz, have 329363 columns in 1438 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2ghaA/nostruct-align/2ghaA.t2k.a2m.gz
# 2ghaA.t2k.a2m with 1782 sequences, total weight= 1782 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.853776 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2ghaA/info/2ghaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2ghaA/nostruct-align/2ghaA.t2k.a2m.gz, have 329737 columns in 1439 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2t/2tnfA/nostruct-align/2tnfA.t2k.a2m.gz
# 2tnfA.t2k.a2m with 256 sequences, total weight= 34.2611 avg weight= 0.133832 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2t/2tnfA/info/2tnfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2t/2tnfA/nostruct-align/2tnfA.t2k.a2m.gz, have 329885 columns in 1440 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1orrA/nostruct-align/1orrA.t2k.a2m.gz
# 1orrA.t2k.a2m with 2032 sequences, total weight= 2032 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0522 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1orrA/info/1orrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1orrA/nostruct-align/1orrA.t2k.a2m.gz, have 330223 columns in 1441 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hm9A/nostruct-align/1hm9A.t2k.a2m.gz
# 1hm9A.t2k.a2m with 973 sequences, total weight= 973 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11375 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hm9A/info/1hm9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hm9A/nostruct-align/1hm9A.t2k.a2m.gz, have 330681 columns in 1442 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2o9cA/nostruct-align/2o9cA.t2k.a2m.gz
# 2o9cA.t2k.a2m with 1585 sequences, total weight= 233.268 avg weight= 0.147172 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30982 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2o9cA/info/2o9cA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2o9cA/nostruct-align/2o9cA.t2k.a2m.gz, have 331000 columns in 1443 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m4lA/nostruct-align/1m4lA.t2k.a2m.gz
# 1m4lA.t2k.a2m with 270 sequences, total weight= 104.154 avg weight= 0.385757 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30165 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m4lA/info/1m4lA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m4lA/nostruct-align/1m4lA.t2k.a2m.gz, have 331307 columns in 1444 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cybA/nostruct-align/2cybA.t2k.a2m.gz
# 2cybA.t2k.a2m with 1128 sequences, total weight= 1128 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28095 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cybA/info/2cybA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cybA/nostruct-align/2cybA.t2k.a2m.gz, have 331626 columns in 1445 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1juhA/nostruct-align/1juhA.t2k.a2m.gz
# 1juhA.t2k.a2m with 42 sequences, total weight= 13.9838 avg weight= 0.332948 14 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1juhA/info/1juhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1juhA/nostruct-align/1juhA.t2k.a2m.gz, have 331960 columns in 1446 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hwwA/nostruct-align/2hwwA.t2k.a2m.gz
# 2hwwA.t2k.a2m with 174 sequences, total weight= 174 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29485 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hwwA/info/2hwwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hwwA/nostruct-align/2hwwA.t2k.a2m.gz, have 332120 columns in 1447 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fprA/nostruct-align/2fprA.t2k.a2m.gz
# 2fprA.t2k.a2m with 756 sequences, total weight= 497.884 avg weight= 0.658576 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30596 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fprA/info/2fprA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fprA/nostruct-align/2fprA.t2k.a2m.gz, have 332276 columns in 1448 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2ikbA/nostruct-align/2ikbA.t2k.a2m.gz
# 2ikbA.t2k.a2m with 90 sequences, total weight= 32.1144 avg weight= 0.356826 42 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2ikbA/info/2ikbA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2ikbA/nostruct-align/2ikbA.t2k.a2m.gz, have 332439 columns in 1449 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e29A/nostruct-align/1e29A.t2k.a2m.gz
# 1e29A.t2k.a2m with 191 sequences, total weight= 52.9628 avg weight= 0.277292 43 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e29A/info/1e29A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1e29A/nostruct-align/1e29A.t2k.a2m.gz, have 332574 columns in 1450 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pxzA/nostruct-align/1pxzA.t2k.a2m.gz
# 1pxzA.t2k.a2m with 258 sequences, total weight= 70.1913 avg weight= 0.272059 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30031 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pxzA/info/1pxzA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pxzA/nostruct-align/1pxzA.t2k.a2m.gz, have 332920 columns in 1451 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g2nA/nostruct-align/1g2nA.t2k.a2m.gz
# 1g2nA.t2k.a2m with 1003 sequences, total weight= 1003 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07481 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g2nA/info/1g2nA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1g2nA/nostruct-align/1g2nA.t2k.a2m.gz, have 333166 columns in 1452 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jo8A/nostruct-align/1jo8A.t2k.a2m.gz
# 1jo8A.t2k.a2m with 1274 sequences, total weight= 47.3702 avg weight= 0.0371823 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3018 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jo8A/info/1jo8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jo8A/nostruct-align/1jo8A.t2k.a2m.gz, have 333224 columns in 1453 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2iaiA/nostruct-align/2iaiA.t2k.a2m.gz
# 2iaiA.t2k.a2m with 5545 sequences, total weight= 5545 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.891524 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2iaiA/info/2iaiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2iaiA/nostruct-align/2iaiA.t2k.a2m.gz, have 333425 columns in 1454 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fn9A/nostruct-align/2fn9A.t2k.a2m.gz
# 2fn9A.t2k.a2m with 2600 sequences, total weight= 2600 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04771 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fn9A/info/2fn9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fn9A/nostruct-align/2fn9A.t2k.a2m.gz, have 333705 columns in 1455 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cuaA/nostruct-align/2cuaA.t2k.a2m.gz
# 2cuaA.t2k.a2m with 2782 sequences, total weight= 40.7787 avg weight= 0.0146581 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cuaA/info/2cuaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cuaA/nostruct-align/2cuaA.t2k.a2m.gz, have 333827 columns in 1456 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sqsA/nostruct-align/1sqsA.t2k.a2m.gz
# 1sqsA.t2k.a2m with 183 sequences, total weight= 183 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25405 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sqsA/info/1sqsA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1sqsA/nostruct-align/1sqsA.t2k.a2m.gz, have 334059 columns in 1457 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fi1A/nostruct-align/2fi1A.t2k.a2m.gz
# 2fi1A.t2k.a2m with 1133 sequences, total weight= 1133 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05275 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fi1A/info/2fi1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fi1A/nostruct-align/2fi1A.t2k.a2m.gz, have 334246 columns in 1458 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ix9A/nostruct-align/1ix9A.t2k.a2m.gz
# 1ix9A.t2k.a2m with 824 sequences, total weight= 21.6753 avg weight= 0.026305 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ix9A/info/1ix9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1ix9A/nostruct-align/1ix9A.t2k.a2m.gz, have 334451 columns in 1459 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2d5mA/nostruct-align/2d5mA.t2k.a2m.gz
# 2d5mA.t2k.a2m with 551 sequences, total weight= 551 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24029 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2d5mA/info/2d5mA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2d5mA/nostruct-align/2d5mA.t2k.a2m.gz, have 334634 columns in 1460 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s2oA/nostruct-align/1s2oA.t2k.a2m.gz
# 1s2oA.t2k.a2m with 789 sequences, total weight= 789 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10955 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s2oA/info/1s2oA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1s2oA/nostruct-align/1s2oA.t2k.a2m.gz, have 334878 columns in 1461 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fssA/nostruct-align/2fssA.t2k.a2m.gz
# 2fssA.t2k.a2m with 3150 sequences, total weight= 905.392 avg weight= 0.287426 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32447 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fssA/info/2fssA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fssA/nostruct-align/2fssA.t2k.a2m.gz, have 335231 columns in 1462 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ornA/nostruct-align/1ornA.t2k.a2m.gz
# 1ornA.t2k.a2m with 517 sequences, total weight= 243.391 avg weight= 0.470776 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3028 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ornA/info/1ornA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1ornA/nostruct-align/1ornA.t2k.a2m.gz, have 335445 columns in 1463 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bwrA/nostruct-align/2bwrA.t2k.a2m.gz
# 2bwrA.t2k.a2m with 278 sequences, total weight= 278 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.867066 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bwrA/info/2bwrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bwrA/nostruct-align/2bwrA.t2k.a2m.gz, have 335846 columns in 1464 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e87A/nostruct-align/1e87A.t2k.a2m.gz
# 1e87A.t2k.a2m with 842 sequences, total weight= 842 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15339 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e87A/info/1e87A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1e87A/nostruct-align/1e87A.t2k.a2m.gz, have 335963 columns in 1465 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2f7vA/nostruct-align/2f7vA.t2k.a2m.gz
# 2f7vA.t2k.a2m with 840 sequences, total weight= 840 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17863 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2f7vA/info/2f7vA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2f7vA/nostruct-align/2f7vA.t2k.a2m.gz, have 336323 columns in 1466 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kjqA/nostruct-align/1kjqA.t2k.a2m.gz
# 1kjqA.t2k.a2m with 809 sequences, total weight= 809 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20451 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kjqA/info/1kjqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kjqA/nostruct-align/1kjqA.t2k.a2m.gz, have 336711 columns in 1467 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2h3lA/nostruct-align/2h3lA.t2k.a2m.gz
# 2h3lA.t2k.a2m with 4010 sequences, total weight= 618.302 avg weight= 0.15419 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.33346 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2h3lA/info/2h3lA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2h3lA/nostruct-align/2h3lA.t2k.a2m.gz, have 336814 columns in 1468 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tif/nostruct-align/1tif.t2k.a2m.gz
# 1tif.t2k.a2m with 186 sequences, total weight= 8.39689 avg weight= 0.0451446 32 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tif/info/1tif.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tif/nostruct-align/1tif.t2k.a2m.gz, have 336890 columns in 1469 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2ibdA/nostruct-align/2ibdA.t2k.a2m.gz
# 2ibdA.t2k.a2m with 6208 sequences, total weight= 6208 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.846572 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2ibdA/info/2ibdA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2ibdA/nostruct-align/2ibdA.t2k.a2m.gz, have 337082 columns in 1470 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dqpA/nostruct-align/1dqpA.t2k.a2m.gz
# 1dqpA.t2k.a2m with 232 sequences, total weight= 37.0352 avg weight= 0.159634 35 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dqpA/info/1dqpA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dqpA/nostruct-align/1dqpA.t2k.a2m.gz, have 337312 columns in 1471 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qveA/nostruct-align/1qveA.t2k.a2m.gz
# 1qveA.t2k.a2m with 289 sequences, total weight= 55.6713 avg weight= 0.192634 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qveA/info/1qveA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qveA/nostruct-align/1qveA.t2k.a2m.gz, have 337438 columns in 1472 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2j5iA/nostruct-align/2j5iA.t2k.a2m.gz
# 2j5iA.t2k.a2m with 4974 sequences, total weight= 4974 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29447 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2j5iA/info/2j5iA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2j5iA/nostruct-align/2j5iA.t2k.a2m.gz, have 337685 columns in 1473 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hsjA/nostruct-align/2hsjA.t2k.a2m.gz
# 2hsjA.t2k.a2m with 474 sequences, total weight= 474 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.999177 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hsjA/info/2hsjA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hsjA/nostruct-align/2hsjA.t2k.a2m.gz, have 337896 columns in 1474 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1ms9A/nostruct-align/1ms9A.t2k.a2m.gz
# 1ms9A.t2k.a2m with 134 sequences, total weight= 57.0712 avg weight= 0.425905 41 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1ms9A/info/1ms9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1ms9A/nostruct-align/1ms9A.t2k.a2m.gz, have 338518 columns in 1475 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zkrA/nostruct-align/1zkrA.t2k.a2m.gz
# 1zkrA.t2k.a2m with 74 sequences, total weight= 11.0796 avg weight= 0.149724 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zkrA/info/1zkrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zkrA/nostruct-align/1zkrA.t2k.a2m.gz, have 338664 columns in 1476 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w66A/nostruct-align/1w66A.t2k.a2m.gz
# 1w66A.t2k.a2m with 320 sequences, total weight= 46.2356 avg weight= 0.144486 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w66A/info/1w66A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w66A/nostruct-align/1w66A.t2k.a2m.gz, have 338882 columns in 1477 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wolA/nostruct-align/1wolA.t2k.a2m.gz
# 1wolA.t2k.a2m with 85 sequences, total weight= 85 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2165 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wolA/info/1wolA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wolA/nostruct-align/1wolA.t2k.a2m.gz, have 339004 columns in 1478 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uv4A/nostruct-align/1uv4A.t2k.a2m.gz
# 1uv4A.t2k.a2m with 247 sequences, total weight= 247 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1282 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uv4A/info/1uv4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uv4A/nostruct-align/1uv4A.t2k.a2m.gz, have 339295 columns in 1479 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2a0b/nostruct-align/2a0b.t2k.a2m.gz
# 2a0b.t2k.a2m with 82 sequences, total weight= 82 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21866 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2a0b/info/2a0b.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2a0b/nostruct-align/2a0b.t2k.a2m.gz, have 339413 columns in 1480 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o4yA/nostruct-align/1o4yA.t2k.a2m.gz
# 1o4yA.t2k.a2m with 74 sequences, total weight= 70.4024 avg weight= 0.951383 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o4yA/info/1o4yA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1o4yA/nostruct-align/1o4yA.t2k.a2m.gz, have 339683 columns in 1481 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uvqB/nostruct-align/1uvqB.t2k.a2m.gz
# 1uvqB.t2k.a2m with 10402 sequences, total weight= 7872.44 avg weight= 0.75682 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30931 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uvqB/info/1uvqB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uvqB/nostruct-align/1uvqB.t2k.a2m.gz, have 339864 columns in 1482 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1ju3A/nostruct-align/1ju3A.t2k.a2m.gz
# 1ju3A.t2k.a2m with 127 sequences, total weight= 127 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10567 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1ju3A/info/1ju3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1ju3A/nostruct-align/1ju3A.t2k.a2m.gz, have 340434 columns in 1483 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2b82A/nostruct-align/2b82A.t2k.a2m.gz
# 2b82A.t2k.a2m with 74 sequences, total weight= 28.1903 avg weight= 0.38095 31 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2b82A/info/2b82A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2b82A/nostruct-align/2b82A.t2k.a2m.gz, have 340645 columns in 1484 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k.a2m.gz
# 1b8oA.t2k.a2m with 189 sequences, total weight= 36.3315 avg weight= 0.19223 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b8oA/info/1b8oA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k.a2m.gz, have 340925 columns in 1485 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fyqA/nostruct-align/2fyqA.t2k.a2m.gz
# 2fyqA.t2k.a2m with 47 sequences, total weight= 3.1351 avg weight= 0.0667042 15 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fyqA/info/2fyqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fyqA/nostruct-align/2fyqA.t2k.a2m.gz, have 341095 columns in 1486 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2a9iA/nostruct-align/2a9iA.t2k.a2m.gz
# 2a9iA.t2k.a2m with 66 sequences, total weight= 19.8585 avg weight= 0.300887 28 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2a9iA/info/2a9iA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2a9iA/nostruct-align/2a9iA.t2k.a2m.gz, have 341200 columns in 1487 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q6oA/nostruct-align/1q6oA.t2k.a2m.gz
# 1q6oA.t2k.a2m with 136 sequences, total weight= 58.4529 avg weight= 0.429801 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q6oA/info/1q6oA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1q6oA/nostruct-align/1q6oA.t2k.a2m.gz, have 341413 columns in 1488 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jo0A/nostruct-align/1jo0A.t2k.a2m.gz
# 1jo0A.t2k.a2m with 129 sequences, total weight= 45.6876 avg weight= 0.354168 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jo0A/info/1jo0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jo0A/nostruct-align/1jo0A.t2k.a2m.gz, have 341510 columns in 1489 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ru0A/nostruct-align/1ru0A.t2k.a2m.gz
# 1ru0A.t2k.a2m with 163 sequences, total weight= 32.199 avg weight= 0.19754 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ru0A/info/1ru0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1ru0A/nostruct-align/1ru0A.t2k.a2m.gz, have 341610 columns in 1490 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f0lA/nostruct-align/1f0lA.t2k.a2m.gz
# 1f0lA.t2k.a2m with 22 sequences, total weight= 2.50403 avg weight= 0.113819 10 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f0lA/info/1f0lA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1f0lA/nostruct-align/1f0lA.t2k.a2m.gz, have 342130 columns in 1491 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qhqA/nostruct-align/1qhqA.t2k.a2m.gz
# 1qhqA.t2k.a2m with 282 sequences, total weight= 216.466 avg weight= 0.767608 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30076 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qhqA/info/1qhqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qhqA/nostruct-align/1qhqA.t2k.a2m.gz, have 342269 columns in 1492 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2ih3C/nostruct-align/2ih3C.t2k.a2m.gz
# 2ih3C.t2k.a2m with 2565 sequences, total weight= 1732.76 avg weight= 0.675541 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31085 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2ih3C/info/2ih3C.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2ih3C/nostruct-align/2ih3C.t2k.a2m.gz, have 342367 columns in 1493 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bjkA/nostruct-align/2bjkA.t2k.a2m.gz
# 2bjkA.t2k.a2m with 5126 sequences, total weight= 1189.81 avg weight= 0.232113 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.33648 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bjkA/info/2bjkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bjkA/nostruct-align/2bjkA.t2k.a2m.gz, have 342883 columns in 1494 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vzwA/nostruct-align/1vzwA.t2k.a2m.gz
# 1vzwA.t2k.a2m with 679 sequences, total weight= 118.02 avg weight= 0.173815 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30495 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vzwA/info/1vzwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vzwA/nostruct-align/1vzwA.t2k.a2m.gz, have 343107 columns in 1495 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y9lA/nostruct-align/1y9lA.t2k.a2m.gz
# 1y9lA.t2k.a2m with 5 sequences, total weight= 1.82932 avg weight= 0.365863 10 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y9lA/info/1y9lA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1y9lA/nostruct-align/1y9lA.t2k.a2m.gz, have 343217 columns in 1496 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xqoA/nostruct-align/1xqoA.t2k.a2m.gz
# 1xqoA.t2k.a2m with 29 sequences, total weight= 16.3475 avg weight= 0.563706 26 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xqoA/info/1xqoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xqoA/nostruct-align/1xqoA.t2k.a2m.gz, have 343470 columns in 1497 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vhqA/nostruct-align/1vhqA.t2k.a2m.gz
# 1vhqA.t2k.a2m with 115 sequences, total weight= 49.2663 avg weight= 0.428403 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vhqA/info/1vhqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vhqA/nostruct-align/1vhqA.t2k.a2m.gz, have 343687 columns in 1498 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e43A/nostruct-align/1e43A.t2k.a2m.gz
# 1e43A.t2k.a2m with 780 sequences, total weight= 780 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14787 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e43A/info/1e43A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1e43A/nostruct-align/1e43A.t2k.a2m.gz, have 344170 columns in 1499 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wbeA/nostruct-align/1wbeA.t2k.a2m.gz
# 1wbeA.t2k.a2m with 125 sequences, total weight= 51.9584 avg weight= 0.415667 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wbeA/info/1wbeA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wbeA/nostruct-align/1wbeA.t2k.a2m.gz, have 344374 columns in 1500 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2dvkA/nostruct-align/2dvkA.t2k.a2m.gz
# 2dvkA.t2k.a2m with 75 sequences, total weight= 32.1077 avg weight= 0.428102 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2dvkA/info/2dvkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2dvkA/nostruct-align/2dvkA.t2k.a2m.gz, have 344540 columns in 1501 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2b5hA/nostruct-align/2b5hA.t2k.a2m.gz
# 2b5hA.t2k.a2m with 130 sequences, total weight= 124.395 avg weight= 0.956886 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2b5hA/info/2b5hA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2b5hA/nostruct-align/2b5hA.t2k.a2m.gz, have 344726 columns in 1502 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yyaA/nostruct-align/1yyaA.t2k.a2m.gz
# 1yyaA.t2k.a2m with 664 sequences, total weight= 26.3058 avg weight= 0.0396171 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yyaA/info/1yyaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yyaA/nostruct-align/1yyaA.t2k.a2m.gz, have 344976 columns in 1503 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2iu1A/nostruct-align/2iu1A.t2k.a2m.gz
# 2iu1A.t2k.a2m with 240 sequences, total weight= 164.565 avg weight= 0.685688 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30049 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2iu1A/info/2iu1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2iu1A/nostruct-align/2iu1A.t2k.a2m.gz, have 345154 columns in 1504 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jayA/nostruct-align/1jayA.t2k.a2m.gz
# 1jayA.t2k.a2m with 1385 sequences, total weight= 1385 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02237 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jayA/info/1jayA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jayA/nostruct-align/1jayA.t2k.a2m.gz, have 345366 columns in 1505 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r26A/nostruct-align/1r26A.t2k.a2m.gz
# 1r26A.t2k.a2m with 1542 sequences, total weight= 1542 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27435 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r26A/info/1r26A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r26A/nostruct-align/1r26A.t2k.a2m.gz, have 345479 columns in 1506 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mugA/nostruct-align/1mugA.t2k.a2m.gz
# 1mugA.t2k.a2m with 55 sequences, total weight= 43.7506 avg weight= 0.795466 41 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mugA/info/1mugA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mugA/nostruct-align/1mugA.t2k.a2m.gz, have 345644 columns in 1507 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vioA/nostruct-align/1vioA.t2k.a2m.gz
# 1vioA.t2k.a2m with 532 sequences, total weight= 107.636 avg weight= 0.202323 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30566 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vioA/info/1vioA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vioA/nostruct-align/1vioA.t2k.a2m.gz, have 345874 columns in 1508 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fstX/nostruct-align/2fstX.t2k.a2m.gz
# 2fstX.t2k.a2m with 20451 sequences, total weight= 20451 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15124 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fstX/info/2fstX.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fstX/nostruct-align/2fstX.t2k.a2m.gz, have 346198 columns in 1509 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cxaA/nostruct-align/2cxaA.t2k.a2m.gz
# 2cxaA.t2k.a2m with 209 sequences, total weight= 17.7555 avg weight= 0.0849546 42 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cxaA/info/2cxaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cxaA/nostruct-align/2cxaA.t2k.a2m.gz, have 346427 columns in 1510 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fbqA/nostruct-align/2fbqA.t2k.a2m.gz
# 2fbqA.t2k.a2m with 3526 sequences, total weight= 3526 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.819044 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fbqA/info/2fbqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fbqA/nostruct-align/2fbqA.t2k.a2m.gz, have 346640 columns in 1511 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kr7A/nostruct-align/1kr7A.t2k.a2m.gz
# 1kr7A.t2k.a2m with 187 sequences, total weight= 53.6772 avg weight= 0.287044 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30034 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kr7A/info/1kr7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kr7A/nostruct-align/1kr7A.t2k.a2m.gz, have 346750 columns in 1512 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fcjA/nostruct-align/2fcjA.t2k.a2m.gz
# 2fcjA.t2k.a2m with 88 sequences, total weight= 18.7667 avg weight= 0.213258 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fcjA/info/2fcjA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fcjA/nostruct-align/2fcjA.t2k.a2m.gz, have 346864 columns in 1513 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2covD/nostruct-align/2covD.t2k.a2m.gz
# 2covD.t2k.a2m with 7 sequences, total weight= 3.52854 avg weight= 0.504078 14 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2covD/info/2covD.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2covD/nostruct-align/2covD.t2k.a2m.gz, have 346956 columns in 1514 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hx6A/nostruct-align/1hx6A.t2k.a2m.gz
# 1hx6A.t2k.a2m with 13 sequences, total weight= 1.89271 avg weight= 0.145593 8 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hx6A/info/1hx6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hx6A/nostruct-align/1hx6A.t2k.a2m.gz, have 347326 columns in 1515 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2oo2A/nostruct-align/2oo2A.t2k.a2m.gz
# 2oo2A.t2k.a2m with 44 sequences, total weight= 17.496 avg weight= 0.397637 31 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2oo2A/info/2oo2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2oo2A/nostruct-align/2oo2A.t2k.a2m.gz, have 347402 columns in 1516 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sw5A/nostruct-align/1sw5A.t2k.a2m.gz
# 1sw5A.t2k.a2m with 170 sequences, total weight= 51.8814 avg weight= 0.305184 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sw5A/info/1sw5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1sw5A/nostruct-align/1sw5A.t2k.a2m.gz, have 347672 columns in 1517 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i12A/nostruct-align/1i12A.t2k.a2m.gz
# 1i12A.t2k.a2m with 531 sequences, total weight= 531 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.939539 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i12A/info/1i12A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1i12A/nostruct-align/1i12A.t2k.a2m.gz, have 347826 columns in 1518 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xk7A/nostruct-align/1xk7A.t2k.a2m.gz
# 1xk7A.t2k.a2m with 717 sequences, total weight= 116.775 avg weight= 0.162867 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30337 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xk7A/info/1xk7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xk7A/nostruct-align/1xk7A.t2k.a2m.gz, have 348233 columns in 1519 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lqaA/nostruct-align/1lqaA.t2k.a2m.gz
# 1lqaA.t2k.a2m with 1244 sequences, total weight= 1244 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28698 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lqaA/info/1lqaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lqaA/nostruct-align/1lqaA.t2k.a2m.gz, have 348579 columns in 1520 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r4pA/nostruct-align/1r4pA.t2k.a2m.gz
# 1r4pA.t2k.a2m with 281 sequences, total weight= 56.6819 avg weight= 0.201715 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r4pA/info/1r4pA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r4pA/nostruct-align/1r4pA.t2k.a2m.gz, have 348860 columns in 1521 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gomA/nostruct-align/2gomA.t2k.a2m.gz
# 2gomA.t2k.a2m with 15 sequences, total weight= 2.84776 avg weight= 0.189851 11 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gomA/info/2gomA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gomA/nostruct-align/2gomA.t2k.a2m.gz, have 348921 columns in 1522 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1z6fA/nostruct-align/1z6fA.t2k.a2m.gz
# 1z6fA.t2k.a2m with 588 sequences, total weight= 164.687 avg weight= 0.28008 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30498 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1z6fA/info/1z6fA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1z6fA/nostruct-align/1z6fA.t2k.a2m.gz, have 349275 columns in 1523 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tvgA/nostruct-align/1tvgA.t2k.a2m.gz
# 1tvgA.t2k.a2m with 35 sequences, total weight= 10.0592 avg weight= 0.287406 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tvgA/info/1tvgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tvgA/nostruct-align/1tvgA.t2k.a2m.gz, have 349411 columns in 1524 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zjcA/nostruct-align/1zjcA.t2k.a2m.gz
# 1zjcA.t2k.a2m with 106 sequences, total weight= 34.4672 avg weight= 0.325163 42 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zjcA/info/1zjcA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zjcA/nostruct-align/1zjcA.t2k.a2m.gz, have 349824 columns in 1525 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h4xA/nostruct-align/1h4xA.t2k.a2m.gz
# 1h4xA.t2k.a2m with 199 sequences, total weight= 199 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28705 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h4xA/info/1h4xA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h4xA/nostruct-align/1h4xA.t2k.a2m.gz, have 349935 columns in 1526 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cjlA/nostruct-align/2cjlA.t2k.a2m.gz
# 2cjlA.t2k.a2m with 656 sequences, total weight= 80.0818 avg weight= 0.122076 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3008 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cjlA/info/2cjlA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cjlA/nostruct-align/2cjlA.t2k.a2m.gz, have 350139 columns in 1527 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k94A/nostruct-align/1k94A.t2k.a2m.gz
# 1k94A.t2k.a2m with 1096 sequences, total weight= 241.615 avg weight= 0.220452 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31156 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k94A/info/1k94A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1k94A/nostruct-align/1k94A.t2k.a2m.gz, have 350304 columns in 1528 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2oemA/nostruct-align/2oemA.t2k.a2m.gz
# 2oemA.t2k.a2m with 17873 sequences, total weight= 20.3582 avg weight= 0.00113904 41 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2oemA/info/2oemA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2oemA/nostruct-align/2oemA.t2k.a2m.gz, have 350712 columns in 1529 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2dc4A/nostruct-align/2dc4A.t2k.a2m.gz
# 2dc4A.t2k.a2m with 87 sequences, total weight= 52.1357 avg weight= 0.599261 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2dc4A/info/2dc4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2dc4A/nostruct-align/2dc4A.t2k.a2m.gz, have 350876 columns in 1530 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v4pA/nostruct-align/1v4pA.t2k.a2m.gz
# 1v4pA.t2k.a2m with 587 sequences, total weight= 103.355 avg weight= 0.176072 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30433 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v4pA/info/1v4pA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v4pA/nostruct-align/1v4pA.t2k.a2m.gz, have 351027 columns in 1531 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hb5A/nostruct-align/2hb5A.t2k.a2m.gz
# 2hb5A.t2k.a2m with 2187 sequences, total weight= 73.2414 avg weight= 0.0334895 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30142 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hb5A/info/2hb5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hb5A/nostruct-align/2hb5A.t2k.a2m.gz, have 351177 columns in 1532 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r62A/nostruct-align/1r62A.t2k.a2m.gz
# 1r62A.t2k.a2m with 5099 sequences, total weight= 5099 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23804 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r62A/info/1r62A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r62A/nostruct-align/1r62A.t2k.a2m.gz, have 351313 columns in 1533 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nofA/nostruct-align/1nofA.t2k.a2m.gz
# 1nofA.t2k.a2m with 71 sequences, total weight= 55.3523 avg weight= 0.77961 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nofA/info/1nofA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nofA/nostruct-align/1nofA.t2k.a2m.gz, have 351696 columns in 1534 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2b0vA/nostruct-align/2b0vA.t2k.a2m.gz
# 2b0vA.t2k.a2m with 1990 sequences, total weight= 1990 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0936 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2b0vA/info/2b0vA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2b0vA/nostruct-align/2b0vA.t2k.a2m.gz, have 351844 columns in 1535 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q1fA/nostruct-align/1q1fA.t2k.a2m.gz
# 1q1fA.t2k.a2m with 1583 sequences, total weight= 797.868 avg weight= 0.504023 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31648 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q1fA/info/1q1fA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1q1fA/nostruct-align/1q1fA.t2k.a2m.gz, have 351992 columns in 1536 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hx0A/nostruct-align/2hx0A.t2k.a2m.gz
# 2hx0A.t2k.a2m with 144 sequences, total weight= 53.0314 avg weight= 0.368273 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hx0A/info/2hx0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hx0A/nostruct-align/2hx0A.t2k.a2m.gz, have 352130 columns in 1537 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gz4A/nostruct-align/2gz4A.t2k.a2m.gz
# 2gz4A.t2k.a2m with 95 sequences, total weight= 23.0211 avg weight= 0.242328 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gz4A/info/2gz4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gz4A/nostruct-align/2gz4A.t2k.a2m.gz, have 352330 columns in 1538 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w9pA/nostruct-align/1w9pA.t2k.a2m.gz
# 1w9pA.t2k.a2m with 1196 sequences, total weight= 1196 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25075 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w9pA/info/1w9pA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w9pA/nostruct-align/1w9pA.t2k.a2m.gz, have 352725 columns in 1539 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2a35A/nostruct-align/2a35A.t2k.a2m.gz
# 2a35A.t2k.a2m with 634 sequences, total weight= 634 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10415 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2a35A/info/2a35A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2a35A/nostruct-align/2a35A.t2k.a2m.gz, have 352933 columns in 1540 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2g8oA/nostruct-align/2g8oA.t2k.a2m.gz
# 2g8oA.t2k.a2m with 616 sequences, total weight= 44.9365 avg weight= 0.0729489 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2g8oA/info/2g8oA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2g8oA/nostruct-align/2g8oA.t2k.a2m.gz, have 353197 columns in 1541 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jakA/nostruct-align/1jakA.t2k.a2m.gz
# 1jakA.t2k.a2m with 180 sequences, total weight= 180 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27202 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jakA/info/1jakA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jakA/nostruct-align/1jakA.t2k.a2m.gz, have 353696 columns in 1542 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n7sB/nostruct-align/1n7sB.t2k.a2m.gz
# 1n7sB.t2k.a2m with 209 sequences, total weight= 27.8301 avg weight= 0.133158 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n7sB/info/1n7sB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1n7sB/nostruct-align/1n7sB.t2k.a2m.gz, have 353764 columns in 1543 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2imlA/nostruct-align/2imlA.t2k.a2m.gz
# 2imlA.t2k.a2m with 34 sequences, total weight= 34 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27653 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2imlA/info/2imlA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2imlA/nostruct-align/2imlA.t2k.a2m.gz, have 353955 columns in 1544 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mn8A/nostruct-align/1mn8A.t2k.a2m.gz
# 1mn8A.t2k.a2m with 177 sequences, total weight= 22.2761 avg weight= 0.125854 30 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mn8A/info/1mn8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mn8A/nostruct-align/1mn8A.t2k.a2m.gz, have 354050 columns in 1545 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2ossA/nostruct-align/2ossA.t2k.a2m.gz
# 2ossA.t2k.a2m with 2420 sequences, total weight= 710.327 avg weight= 0.293524 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32626 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2ossA/info/2ossA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2ossA/nostruct-align/2ossA.t2k.a2m.gz, have 354177 columns in 1546 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d2sA/nostruct-align/1d2sA.t2k.a2m.gz
# 1d2sA.t2k.a2m with 533 sequences, total weight= 533 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09692 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d2sA/info/1d2sA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1d2sA/nostruct-align/1d2sA.t2k.a2m.gz, have 354347 columns in 1547 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jixA/nostruct-align/1jixA.t2k.a2m.gz
# 1jixA.t2k.a2m with 6 sequences, total weight= 2.88219 avg weight= 0.480366 9 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jixA/info/1jixA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jixA/nostruct-align/1jixA.t2k.a2m.gz, have 354698 columns in 1548 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rl0A/nostruct-align/1rl0A.t2k.a2m.gz
# 1rl0A.t2k.a2m with 317 sequences, total weight= 30.7785 avg weight= 0.0970932 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rl0A/info/1rl0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rl0A/nostruct-align/1rl0A.t2k.a2m.gz, have 354953 columns in 1549 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2g2nA/nostruct-align/2g2nA.t2k.a2m.gz
# 2g2nA.t2k.a2m with 289 sequences, total weight= 12.9716 avg weight= 0.0448844 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2g2nA/info/2g2nA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2g2nA/nostruct-align/2g2nA.t2k.a2m.gz, have 355064 columns in 1550 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e4cP/nostruct-align/1e4cP.t2k.a2m.gz
# 1e4cP.t2k.a2m with 358 sequences, total weight= 162.174 avg weight= 0.453001 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30319 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e4cP/info/1e4cP.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1e4cP/nostruct-align/1e4cP.t2k.a2m.gz, have 355270 columns in 1551 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ezwA/nostruct-align/1ezwA.t2k.a2m.gz
# 1ezwA.t2k.a2m with 431 sequences, total weight= 431 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11018 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ezwA/info/1ezwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1ezwA/nostruct-align/1ezwA.t2k.a2m.gz, have 355617 columns in 1552 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2c81A/nostruct-align/2c81A.t2k.a2m.gz
# 2c81A.t2k.a2m with 2569 sequences, total weight= 2569 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02808 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2c81A/info/2c81A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2c81A/nostruct-align/2c81A.t2k.a2m.gz, have 356025 columns in 1553 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2c9jA/nostruct-align/2c9jA.t2k.a2m.gz
# 2c9jA.t2k.a2m with 584 sequences, total weight= 15.287 avg weight= 0.0261764 36 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2c9jA/info/2c9jA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2c9jA/nostruct-align/2c9jA.t2k.a2m.gz, have 356238 columns in 1554 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p9gA/nostruct-align/1p9gA.t2k.a2m.gz
# 1p9gA.t2k.a2m with 21 sequences, total weight= 2.33423 avg weight= 0.111154 14 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p9gA/info/1p9gA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1p9gA/nostruct-align/1p9gA.t2k.a2m.gz, have 356279 columns in 1555 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2j1aA/nostruct-align/2j1aA.t2k.a2m.gz
# 2j1aA.t2k.a2m with 392 sequences, total weight= 392 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04619 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2j1aA/info/2j1aA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2j1aA/nostruct-align/2j1aA.t2k.a2m.gz, have 356420 columns in 1556 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ryoA/nostruct-align/1ryoA.t2k.a2m.gz
# 1ryoA.t2k.a2m with 444 sequences, total weight= 64.6735 avg weight= 0.145661 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30069 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ryoA/info/1ryoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1ryoA/nostruct-align/1ryoA.t2k.a2m.gz, have 356744 columns in 1557 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kr4A/nostruct-align/1kr4A.t2k.a2m.gz
# 1kr4A.t2k.a2m with 84 sequences, total weight= 18.2757 avg weight= 0.217568 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kr4A/info/1kr4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kr4A/nostruct-align/1kr4A.t2k.a2m.gz, have 356854 columns in 1558 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kxoA/nostruct-align/1kxoA.t2k.a2m.gz
# 1kxoA.t2k.a2m with 90 sequences, total weight= 87.2514 avg weight= 0.96946 42 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kxoA/info/1kxoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kxoA/nostruct-align/1kxoA.t2k.a2m.gz, have 357019 columns in 1559 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bu8A/nostruct-align/1bu8A.t2k.a2m.gz
# 1bu8A.t2k.a2m with 277 sequences, total weight= 93.6215 avg weight= 0.337984 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bu8A/info/1bu8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1bu8A/nostruct-align/1bu8A.t2k.a2m.gz, have 357465 columns in 1560 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ys1X/nostruct-align/1ys1X.t2k.a2m.gz
# 1ys1X.t2k.a2m with 1135 sequences, total weight= 1135 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.926584 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ys1X/info/1ys1X.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1ys1X/nostruct-align/1ys1X.t2k.a2m.gz, have 357785 columns in 1561 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vr9A/nostruct-align/1vr9A.t2k.a2m.gz
# 1vr9A.t2k.a2m with 1002 sequences, total weight= 1002 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28489 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vr9A/info/1vr9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vr9A/nostruct-align/1vr9A.t2k.a2m.gz, have 357906 columns in 1562 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1ta8A/nostruct-align/1ta8A.t2k.a2m.gz
# 1ta8A.t2k.a2m with 298 sequences, total weight= 23.1135 avg weight= 0.0775622 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1ta8A/info/1ta8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1ta8A/nostruct-align/1ta8A.t2k.a2m.gz, have 358219 columns in 1563 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lvmA/nostruct-align/1lvmA.t2k.a2m.gz
# 1lvmA.t2k.a2m with 257 sequences, total weight= 15.7385 avg weight= 0.0612392 36 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lvmA/info/1lvmA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lvmA/nostruct-align/1lvmA.t2k.a2m.gz, have 358448 columns in 1564 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gwyA/nostruct-align/1gwyA.t2k.a2m.gz
# 1gwyA.t2k.a2m with 14 sequences, total weight= 2.72373 avg weight= 0.194552 13 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gwyA/info/1gwyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gwyA/nostruct-align/1gwyA.t2k.a2m.gz, have 358623 columns in 1565 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cveA/nostruct-align/2cveA.t2k.a2m.gz
# 2cveA.t2k.a2m with 302 sequences, total weight= 44.3349 avg weight= 0.146804 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30038 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cveA/info/2cveA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cveA/nostruct-align/2cveA.t2k.a2m.gz, have 358813 columns in 1566 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j24A/nostruct-align/1j24A.t2k.a2m.gz
# 1j24A.t2k.a2m with 65 sequences, total weight= 31.9179 avg weight= 0.491045 45 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j24A/info/1j24A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1j24A/nostruct-align/1j24A.t2k.a2m.gz, have 358946 columns in 1567 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2ob3A/nostruct-align/2ob3A.t2k.a2m.gz
# 2ob3A.t2k.a2m with 138 sequences, total weight= 35.6832 avg weight= 0.258574 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2ob3A/info/2ob3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2ob3A/nostruct-align/2ob3A.t2k.a2m.gz, have 359276 columns in 1568 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hxhA/nostruct-align/1hxhA.t2k.a2m.gz
# 1hxhA.t2k.a2m with 4081 sequences, total weight= 4081 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25948 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hxhA/info/1hxhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hxhA/nostruct-align/1hxhA.t2k.a2m.gz, have 359529 columns in 1569 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gz2A/nostruct-align/1gz2A.t2k.a2m.gz
# 1gz2A.t2k.a2m with 851 sequences, total weight= 851 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11802 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gz2A/info/1gz2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gz2A/nostruct-align/1gz2A.t2k.a2m.gz, have 359668 columns in 1570 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/4u/4ubpA/nostruct-align/4ubpA.t2k.a2m.gz
# 4ubpA.t2k.a2m with 153 sequences, total weight= 4.8802 avg weight= 0.0318967 22 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/4u/4ubpA/info/4ubpA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/4u/4ubpA/nostruct-align/4ubpA.t2k.a2m.gz, have 359768 columns in 1571 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fufA/nostruct-align/2fufA.t2k.a2m.gz
# 2fufA.t2k.a2m with 219 sequences, total weight= 8.16968 avg weight= 0.0373045 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fufA/info/2fufA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fufA/nostruct-align/2fufA.t2k.a2m.gz, have 359894 columns in 1572 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fpqA/nostruct-align/2fpqA.t2k.a2m.gz
# 2fpqA.t2k.a2m with 128 sequences, total weight= 14.6706 avg weight= 0.114614 28 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fpqA/info/2fpqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fpqA/nostruct-align/2fpqA.t2k.a2m.gz, have 360307 columns in 1573 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iukA/nostruct-align/1iukA.t2k.a2m.gz
# 1iukA.t2k.a2m with 145 sequences, total weight= 38.0133 avg weight= 0.262161 45 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iukA/info/1iukA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1iukA/nostruct-align/1iukA.t2k.a2m.gz, have 360443 columns in 1574 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1ccwA/nostruct-align/1ccwA.t2k.a2m.gz
# 1ccwA.t2k.a2m with 307 sequences, total weight= 58.3234 avg weight= 0.189978 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30033 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1ccwA/info/1ccwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1ccwA/nostruct-align/1ccwA.t2k.a2m.gz, have 360580 columns in 1575 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mtpA/nostruct-align/1mtpA.t2k.a2m.gz
# 1mtpA.t2k.a2m with 685 sequences, total weight= 108.238 avg weight= 0.158011 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30824 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mtpA/info/1mtpA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mtpA/nostruct-align/1mtpA.t2k.a2m.gz, have 360900 columns in 1576 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1senA/nostruct-align/1senA.t2k.a2m.gz
# 1senA.t2k.a2m with 1126 sequences, total weight= 825.374 avg weight= 0.733014 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30524 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1senA/info/1senA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1senA/nostruct-align/1senA.t2k.a2m.gz, have 361034 columns in 1577 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y8aA/nostruct-align/1y8aA.t2k.a2m.gz
# 1y8aA.t2k.a2m with 167 sequences, total weight= 126.68 avg weight= 0.758566 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y8aA/info/1y8aA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1y8aA/nostruct-align/1y8aA.t2k.a2m.gz, have 361347 columns in 1578 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pg4A/nostruct-align/1pg4A.t2k.a2m.gz
# 1pg4A.t2k.a2m with 2465 sequences, total weight= 2465 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10851 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pg4A/info/1pg4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pg4A/nostruct-align/1pg4A.t2k.a2m.gz, have 361980 columns in 1579 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b5eA/nostruct-align/1b5eA.t2k.a2m.gz
# 1b5eA.t2k.a2m with 186 sequences, total weight= 32.7727 avg weight= 0.176197 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b5eA/info/1b5eA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1b5eA/nostruct-align/1b5eA.t2k.a2m.gz, have 362221 columns in 1580 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2akfA/nostruct-align/2akfA.t2k.a2m.gz
# 2akfA.t2k.a2m with 23 sequences, total weight= 2.27446 avg weight= 0.0988897 9 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2akfA/info/2akfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2akfA/nostruct-align/2akfA.t2k.a2m.gz, have 362253 columns in 1581 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yr2A/nostruct-align/1yr2A.t2k.a2m.gz
# 1yr2A.t2k.a2m with 490 sequences, total weight= 490 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.988496 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yr2A/info/1yr2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yr2A/nostruct-align/1yr2A.t2k.a2m.gz, have 362933 columns in 1582 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hahA/nostruct-align/2hahA.t2k.a2m.gz
# 2hahA.t2k.a2m with 20004 sequences, total weight= 7.82281 avg weight= 0.000391062 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hahA/info/2hahA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hahA/nostruct-align/2hahA.t2k.a2m.gz, have 363045 columns in 1583 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1ft5A/nostruct-align/1ft5A.t2k.a2m.gz
# 1ft5A.t2k.a2m with 65 sequences, total weight= 65 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.898972 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1ft5A/info/1ft5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1ft5A/nostruct-align/1ft5A.t2k.a2m.gz, have 363256 columns in 1584 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2h14A/nostruct-align/2h14A.t2k.a2m.gz
# 2h14A.t2k.a2m with 13769 sequences, total weight= 13769 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.861059 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2h14A/info/2h14A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2h14A/nostruct-align/2h14A.t2k.a2m.gz, have 363559 columns in 1585 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fbaA/nostruct-align/2fbaA.t2k.a2m.gz
# 2fbaA.t2k.a2m with 163 sequences, total weight= 163 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22749 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fbaA/info/2fbaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fbaA/nostruct-align/2fbaA.t2k.a2m.gz, have 364051 columns in 1586 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hsaA/nostruct-align/2hsaA.t2k.a2m.gz
# 2hsaA.t2k.a2m with 1519 sequences, total weight= 387.007 avg weight= 0.254777 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32443 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hsaA/info/2hsaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hsaA/nostruct-align/2hsaA.t2k.a2m.gz, have 364427 columns in 1587 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1z2nX/nostruct-align/1z2nX.t2k.a2m.gz
# 1z2nX.t2k.a2m with 147 sequences, total weight= 147 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22672 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1z2nX/info/1z2nX.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1z2nX/nostruct-align/1z2nX.t2k.a2m.gz, have 364738 columns in 1588 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bkxA/nostruct-align/2bkxA.t2k.a2m.gz
# 2bkxA.t2k.a2m with 402 sequences, total weight= 122.292 avg weight= 0.304209 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30531 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bkxA/info/2bkxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bkxA/nostruct-align/2bkxA.t2k.a2m.gz, have 364980 columns in 1589 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qgvA/nostruct-align/1qgvA.t2k.a2m.gz
# 1qgvA.t2k.a2m with 314 sequences, total weight= 95.9675 avg weight= 0.305629 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qgvA/info/1qgvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qgvA/nostruct-align/1qgvA.t2k.a2m.gz, have 365110 columns in 1590 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dpjB/nostruct-align/1dpjB.t2k.a2m.gz
# 1dpjB.t2k.a2m with 5 sequences, total weight= 2.06851 avg weight= 0.413703 7 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dpjB/info/1dpjB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dpjB/nostruct-align/1dpjB.t2k.a2m.gz, have 365139 columns in 1591 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gnrA/nostruct-align/2gnrA.t2k.a2m.gz
# 2gnrA.t2k.a2m with 164 sequences, total weight= 164 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26592 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gnrA/info/2gnrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gnrA/nostruct-align/2gnrA.t2k.a2m.gz, have 365276 columns in 1592 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2ds5A/nostruct-align/2ds5A.t2k.a2m.gz
# 2ds5A.t2k.a2m with 499 sequences, total weight= 5.08926 avg weight= 0.0101989 30 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2ds5A/info/2ds5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2ds5A/nostruct-align/2ds5A.t2k.a2m.gz, have 365319 columns in 1593 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bupA/nostruct-align/1bupA.t2k.a2m.gz
# 1bupA.t2k.a2m with 1172 sequences, total weight= 80.0594 avg weight= 0.06831 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30335 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bupA/info/1bupA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1bupA/nostruct-align/1bupA.t2k.a2m.gz, have 365697 columns in 1594 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u69A/nostruct-align/1u69A.t2k.a2m.gz
# 1u69A.t2k.a2m with 97 sequences, total weight= 18.3065 avg weight= 0.188727 36 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u69A/info/1u69A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1u69A/nostruct-align/1u69A.t2k.a2m.gz, have 365853 columns in 1595 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1z0pA/nostruct-align/1z0pA.t2k.a2m.gz
# 1z0pA.t2k.a2m with 11 sequences, total weight= 2.81668 avg weight= 0.256062 12 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1z0pA/info/1z0pA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1z0pA/nostruct-align/1z0pA.t2k.a2m.gz, have 365926 columns in 1596 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p6oA/nostruct-align/1p6oA.t2k.a2m.gz
# 1p6oA.t2k.a2m with 452 sequences, total weight= 150.276 avg weight= 0.33247 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30189 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p6oA/info/1p6oA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1p6oA/nostruct-align/1p6oA.t2k.a2m.gz, have 366082 columns in 1597 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2i9wA/nostruct-align/2i9wA.t2k.a2m.gz
# 2i9wA.t2k.a2m with 599 sequences, total weight= 50.7171 avg weight= 0.0846696 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2i9wA/info/2i9wA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2i9wA/nostruct-align/2i9wA.t2k.a2m.gz, have 366259 columns in 1598 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xodA/nostruct-align/1xodA.t2k.a2m.gz
# 1xodA.t2k.a2m with 120 sequences, total weight= 10.5585 avg weight= 0.0879875 27 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xodA/info/1xodA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xodA/nostruct-align/1xodA.t2k.a2m.gz, have 366364 columns in 1599 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l7mA/nostruct-align/1l7mA.t2k.a2m.gz
# 1l7mA.t2k.a2m with 885 sequences, total weight= 885 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.965137 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l7mA/info/1l7mA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1l7mA/nostruct-align/1l7mA.t2k.a2m.gz, have 366573 columns in 1600 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vprA/nostruct-align/1vprA.t2k.a2m.gz
# 1vprA.t2k.a2m with 27 sequences, total weight= 2.36306 avg weight= 0.0875207 13 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vprA/info/1vprA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vprA/nostruct-align/1vprA.t2k.a2m.gz, have 366924 columns in 1601 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i4uA/nostruct-align/1i4uA.t2k.a2m.gz
# 1i4uA.t2k.a2m with 162 sequences, total weight= 162 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22159 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i4uA/info/1i4uA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1i4uA/nostruct-align/1i4uA.t2k.a2m.gz, have 367105 columns in 1602 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2a7mA/nostruct-align/2a7mA.t2k.a2m.gz
# 2a7mA.t2k.a2m with 1029 sequences, total weight= 1029 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.98923 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2a7mA/info/2a7mA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2a7mA/nostruct-align/2a7mA.t2k.a2m.gz, have 367355 columns in 1603 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wqjB/nostruct-align/1wqjB.t2k.a2m.gz
# 1wqjB.t2k.a2m with 272 sequences, total weight= 37.5256 avg weight= 0.137962 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wqjB/info/1wqjB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wqjB/nostruct-align/1wqjB.t2k.a2m.gz, have 367435 columns in 1604 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2b06A/nostruct-align/2b06A.t2k.a2m.gz
# 2b06A.t2k.a2m with 2719 sequences, total weight= 2719 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11376 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2b06A/info/2b06A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2b06A/nostruct-align/2b06A.t2k.a2m.gz, have 367585 columns in 1605 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f3uA/nostruct-align/1f3uA.t2k.a2m.gz
# 1f3uA.t2k.a2m with 19 sequences, total weight= 11.4342 avg weight= 0.601797 20 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f3uA/info/1f3uA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1f3uA/nostruct-align/1f3uA.t2k.a2m.gz, have 367703 columns in 1606 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2p/2p02A/nostruct-align/2p02A.t2k.a2m.gz
# 2p02A.t2k.a2m with 975 sequences, total weight= 10.3368 avg weight= 0.0106019 35 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2p/2p02A/info/2p02A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2p/2p02A/nostruct-align/2p02A.t2k.a2m.gz, have 368083 columns in 1607 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2opoA/nostruct-align/2opoA.t2k.a2m.gz
# 2opoA.t2k.a2m with 7697 sequences, total weight= 568.525 avg weight= 0.0738632 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3511 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2opoA/info/2opoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2opoA/nostruct-align/2opoA.t2k.a2m.gz, have 368164 columns in 1608 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2odiA/nostruct-align/2odiA.t2k.a2m.gz
# 2odiA.t2k.a2m with 13 sequences, total weight= 12.0775 avg weight= 0.929039 16 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2odiA/info/2odiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2odiA/nostruct-align/2odiA.t2k.a2m.gz, have 368402 columns in 1609 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h7zA/nostruct-align/1h7zA.t2k.a2m.gz
# 1h7zA.t2k.a2m with 69 sequences, total weight= 15.434 avg weight= 0.223681 31 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h7zA/info/1h7zA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h7zA/nostruct-align/1h7zA.t2k.a2m.gz, have 368593 columns in 1610 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m0wA/nostruct-align/1m0wA.t2k.a2m.gz
# 1m0wA.t2k.a2m with 52 sequences, total weight= 14.1194 avg weight= 0.271527 31 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m0wA/info/1m0wA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m0wA/nostruct-align/1m0wA.t2k.a2m.gz, have 369074 columns in 1611 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fa5A/nostruct-align/2fa5A.t2k.a2m.gz
# 2fa5A.t2k.a2m with 2873 sequences, total weight= 2873 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08216 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fa5A/info/2fa5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fa5A/nostruct-align/2fa5A.t2k.a2m.gz, have 369213 columns in 1612 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wo8A/nostruct-align/1wo8A.t2k.a2m.gz
# 1wo8A.t2k.a2m with 111 sequences, total weight= 9.37753 avg weight= 0.0844822 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wo8A/info/1wo8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wo8A/nostruct-align/1wo8A.t2k.a2m.gz, have 369339 columns in 1613 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2aqmA/nostruct-align/2aqmA.t2k.a2m.gz
# 2aqmA.t2k.a2m with 849 sequences, total weight= 38.4825 avg weight= 0.0453269 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2aqmA/info/2aqmA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2aqmA/nostruct-align/2aqmA.t2k.a2m.gz, have 369493 columns in 1614 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cwrA/nostruct-align/2cwrA.t2k.a2m.gz
# 2cwrA.t2k.a2m with 105 sequences, total weight= 24.2356 avg weight= 0.230815 35 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cwrA/info/2cwrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cwrA/nostruct-align/2cwrA.t2k.a2m.gz, have 369590 columns in 1615 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s5dA/nostruct-align/1s5dA.t2k.a2m.gz
# 1s5dA.t2k.a2m with 47 sequences, total weight= 14.4542 avg weight= 0.307536 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s5dA/info/1s5dA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1s5dA/nostruct-align/1s5dA.t2k.a2m.gz, have 369808 columns in 1616 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m40A/nostruct-align/1m40A.t2k.a2m.gz
# 1m40A.t2k.a2m with 480 sequences, total weight= 80.664 avg weight= 0.16805 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30154 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m40A/info/1m40A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m40A/nostruct-align/1m40A.t2k.a2m.gz, have 370071 columns in 1617 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1z0nA/nostruct-align/1z0nA.t2k.a2m.gz
# 1z0nA.t2k.a2m with 179 sequences, total weight= 45.4988 avg weight= 0.254183 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1z0nA/info/1z0nA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1z0nA/nostruct-align/1z0nA.t2k.a2m.gz, have 370158 columns in 1618 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2izrA/nostruct-align/2izrA.t2k.a2m.gz
# 2izrA.t2k.a2m with 20422 sequences, total weight= 20422 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11076 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2izrA/info/2izrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2izrA/nostruct-align/2izrA.t2k.a2m.gz, have 370456 columns in 1619 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2g7oA/nostruct-align/2g7oA.t2k.a2m.gz
# 2g7oA.t2k.a2m with 20 sequences, total weight= 3.7668 avg weight= 0.18834 14 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2g7oA/info/2g7oA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2g7oA/nostruct-align/2g7oA.t2k.a2m.gz, have 370524 columns in 1620 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g5tA/nostruct-align/1g5tA.t2k.a2m.gz
# 1g5tA.t2k.a2m with 114 sequences, total weight= 14.7585 avg weight= 0.12946 38 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g5tA/info/1g5tA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1g5tA/nostruct-align/1g5tA.t2k.a2m.gz, have 370681 columns in 1621 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d2vA/nostruct-align/1d2vA.t2k.a2m.gz
# 1d2vA.t2k.a2m with 125 sequences, total weight= 15.7323 avg weight= 0.125859 35 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d2vA/info/1d2vA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1d2vA/nostruct-align/1d2vA.t2k.a2m.gz, have 370785 columns in 1622 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sbp/nostruct-align/1sbp.t2k.a2m.gz
# 1sbp.t2k.a2m with 219 sequences, total weight= 219 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18963 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sbp/info/1sbp.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1sbp/nostruct-align/1sbp.t2k.a2m.gz, have 371094 columns in 1623 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rqwA/nostruct-align/1rqwA.t2k.a2m.gz
# 1rqwA.t2k.a2m with 247 sequences, total weight= 12.3743 avg weight= 0.0500984 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rqwA/info/1rqwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rqwA/nostruct-align/1rqwA.t2k.a2m.gz, have 371301 columns in 1624 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cs7A/nostruct-align/2cs7A.t2k.a2m.gz
# 2cs7A.t2k.a2m with 154 sequences, total weight= 9.37676 avg weight= 0.060888 26 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cs7A/info/2cs7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cs7A/nostruct-align/2cs7A.t2k.a2m.gz, have 371356 columns in 1625 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2a3nA/nostruct-align/2a3nA.t2k.a2m.gz
# 2a3nA.t2k.a2m with 992 sequences, total weight= 992 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25247 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2a3nA/info/2a3nA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2a3nA/nostruct-align/2a3nA.t2k.a2m.gz, have 371692 columns in 1626 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pvgA/nostruct-align/1pvgA.t2k.a2m.gz
# 1pvgA.t2k.a2m with 1516 sequences, total weight= 31.3672 avg weight= 0.0206908 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pvgA/info/1pvgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pvgA/nostruct-align/1pvgA.t2k.a2m.gz, have 372070 columns in 1627 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pzsA/nostruct-align/1pzsA.t2k.a2m.gz
# 1pzsA.t2k.a2m with 510 sequences, total weight= 28.1677 avg weight= 0.0552308 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pzsA/info/1pzsA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pzsA/nostruct-align/1pzsA.t2k.a2m.gz, have 372241 columns in 1628 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vkpA/nostruct-align/1vkpA.t2k.a2m.gz
# 1vkpA.t2k.a2m with 89 sequences, total weight= 20.9836 avg weight= 0.235771 39 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vkpA/info/1vkpA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vkpA/nostruct-align/1vkpA.t2k.a2m.gz, have 372606 columns in 1629 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bm8/nostruct-align/1bm8.t2k.a2m.gz
# 1bm8.t2k.a2m with 30 sequences, total weight= 9.642 avg weight= 0.3214 24 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bm8/info/1bm8.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1bm8/nostruct-align/1bm8.t2k.a2m.gz, have 372705 columns in 1630 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2o6sA/nostruct-align/2o6sA.t2k.a2m.gz
# 2o6sA.t2k.a2m with 13356 sequences, total weight= 13356 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04776 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2o6sA/info/2o6sA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2o6sA/nostruct-align/2o6sA.t2k.a2m.gz, have 372913 columns in 1631 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2j2jA/nostruct-align/2j2jA.t2k.a2m.gz
# 2j2jA.t2k.a2m with 104 sequences, total weight= 15.7892 avg weight= 0.151819 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2j2jA/info/2j2jA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2j2jA/nostruct-align/2j2jA.t2k.a2m.gz, have 373095 columns in 1632 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2j5gA/nostruct-align/2j5gA.t2k.a2m.gz
# 2j5gA.t2k.a2m with 3496 sequences, total weight= 375.829 avg weight= 0.107503 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3379 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2j5gA/info/2j5gA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2j5gA/nostruct-align/2j5gA.t2k.a2m.gz, have 373343 columns in 1633 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rutX/nostruct-align/1rutX.t2k.a2m.gz
# 1rutX.t2k.a2m with 1296 sequences, total weight= 396.491 avg weight= 0.305935 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3139 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rutX/info/1rutX.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rutX/nostruct-align/1rutX.t2k.a2m.gz, have 373500 columns in 1634 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2m/2mcm/nostruct-align/2mcm.t2k.a2m.gz
# 2mcm.t2k.a2m with 20 sequences, total weight= 3.54203 avg weight= 0.177101 16 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2m/2mcm/info/2mcm.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2m/2mcm/nostruct-align/2mcm.t2k.a2m.gz, have 373612 columns in 1635 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1ht6A/nostruct-align/1ht6A.t2k.a2m.gz
# 1ht6A.t2k.a2m with 1333 sequences, total weight= 1333 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15787 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1ht6A/info/1ht6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1ht6A/nostruct-align/1ht6A.t2k.a2m.gz, have 374016 columns in 1636 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rreA/nostruct-align/1rreA.t2k.a2m.gz
# 1rreA.t2k.a2m with 580 sequences, total weight= 147.223 avg weight= 0.253832 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30631 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rreA/info/1rreA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rreA/nostruct-align/1rreA.t2k.a2m.gz, have 374198 columns in 1637 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1czpA/nostruct-align/1czpA.t2k.a2m.gz
# 1czpA.t2k.a2m with 383 sequences, total weight= 76.1063 avg weight= 0.198711 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30108 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1czpA/info/1czpA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1czpA/nostruct-align/1czpA.t2k.a2m.gz, have 374296 columns in 1638 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ok7A/nostruct-align/1ok7A.t2k.a2m.gz
# 1ok7A.t2k.a2m with 279 sequences, total weight= 72.7951 avg weight= 0.260914 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30226 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ok7A/info/1ok7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1ok7A/nostruct-align/1ok7A.t2k.a2m.gz, have 374662 columns in 1639 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2ia1A/nostruct-align/2ia1A.t2k.a2m.gz
# 2ia1A.t2k.a2m with 59 sequences, total weight= 13.2285 avg weight= 0.224213 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2ia1A/info/2ia1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2ia1A/nostruct-align/2ia1A.t2k.a2m.gz, have 374831 columns in 1640 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2aebA/nostruct-align/2aebA.t2k.a2m.gz
# 2aebA.t2k.a2m with 548 sequences, total weight= 457.351 avg weight= 0.834582 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30186 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2aebA/info/2aebA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2aebA/nostruct-align/2aebA.t2k.a2m.gz, have 375145 columns in 1641 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2j8kA/nostruct-align/2j8kA.t2k.a2m.gz
# 2j8kA.t2k.a2m with 1364 sequences, total weight= 1364 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18146 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2j8kA/info/2j8kA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2j8kA/nostruct-align/2j8kA.t2k.a2m.gz, have 375326 columns in 1642 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wvhA/nostruct-align/1wvhA.t2k.a2m.gz
# 1wvhA.t2k.a2m with 92 sequences, total weight= 6.70712 avg weight= 0.0729035 22 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wvhA/info/1wvhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wvhA/nostruct-align/1wvhA.t2k.a2m.gz, have 375458 columns in 1643 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1ve4A/nostruct-align/1ve4A.t2k.a2m.gz
# 1ve4A.t2k.a2m with 273 sequences, total weight= 28.6179 avg weight= 0.104827 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1ve4A/info/1ve4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1ve4A/nostruct-align/1ve4A.t2k.a2m.gz, have 375659 columns in 1644 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2b1yA/nostruct-align/2b1yA.t2k.a2m.gz
# 2b1yA.t2k.a2m with 25 sequences, total weight= 10.4473 avg weight= 0.417891 23 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2b1yA/info/2b1yA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2b1yA/nostruct-align/2b1yA.t2k.a2m.gz, have 375760 columns in 1645 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1in4A/nostruct-align/1in4A.t2k.a2m.gz
# 1in4A.t2k.a2m with 1724 sequences, total weight= 1724 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05122 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1in4A/info/1in4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1in4A/nostruct-align/1in4A.t2k.a2m.gz, have 376058 columns in 1646 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bkyX/nostruct-align/2bkyX.t2k.a2m.gz
# 2bkyX.t2k.a2m with 31 sequences, total weight= 8.08584 avg weight= 0.260834 22 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bkyX/info/2bkyX.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bkyX/nostruct-align/2bkyX.t2k.a2m.gz, have 376144 columns in 1647 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2p/2pvbA/nostruct-align/2pvbA.t2k.a2m.gz
# 2pvbA.t2k.a2m with 1397 sequences, total weight= 788.91 avg weight= 0.564718 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31366 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2p/2pvbA/info/2pvbA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2p/2pvbA/nostruct-align/2pvbA.t2k.a2m.gz, have 376251 columns in 1648 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fr2A/nostruct-align/2fr2A.t2k.a2m.gz
# 2fr2A.t2k.a2m with 69 sequences, total weight= 25.7058 avg weight= 0.372548 36 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fr2A/info/2fr2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fr2A/nostruct-align/2fr2A.t2k.a2m.gz, have 376412 columns in 1649 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nu4A/nostruct-align/1nu4A.t2k.a2m.gz
# 1nu4A.t2k.a2m with 3419 sequences, total weight= 3419 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28294 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nu4A/info/1nu4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nu4A/nostruct-align/1nu4A.t2k.a2m.gz, have 376503 columns in 1650 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j77A/nostruct-align/1j77A.t2k.a2m.gz
# 1j77A.t2k.a2m with 41 sequences, total weight= 16.5894 avg weight= 0.404619 26 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j77A/info/1j77A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1j77A/nostruct-align/1j77A.t2k.a2m.gz, have 376702 columns in 1651 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n1jB/nostruct-align/1n1jB.t2k.a2m.gz
# 1n1jB.t2k.a2m with 344 sequences, total weight= 34.5562 avg weight= 0.100454 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n1jB/info/1n1jB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1n1jB/nostruct-align/1n1jB.t2k.a2m.gz, have 376780 columns in 1652 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hxrA/nostruct-align/1hxrA.t2k.a2m.gz
# 1hxrA.t2k.a2m with 15 sequences, total weight= 6.56916 avg weight= 0.437944 19 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hxrA/info/1hxrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hxrA/nostruct-align/1hxrA.t2k.a2m.gz, have 376887 columns in 1653 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j27A/nostruct-align/1j27A.t2k.a2m.gz
# 1j27A.t2k.a2m with 24 sequences, total weight= 12.2637 avg weight= 0.510988 26 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j27A/info/1j27A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1j27A/nostruct-align/1j27A.t2k.a2m.gz, have 376985 columns in 1654 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kq1A/nostruct-align/1kq1A.t2k.a2m.gz
# 1kq1A.t2k.a2m with 77 sequences, total weight= 5.11889 avg weight= 0.0664791 23 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kq1A/info/1kq1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kq1A/nostruct-align/1kq1A.t2k.a2m.gz, have 377045 columns in 1655 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vbuA/nostruct-align/1vbuA.t2k.a2m.gz
# 1vbuA.t2k.a2m with 429 sequences, total weight= 127.911 avg weight= 0.298162 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30186 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vbuA/info/1vbuA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vbuA/nostruct-align/1vbuA.t2k.a2m.gz, have 377369 columns in 1656 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1ktgA/nostruct-align/1ktgA.t2k.a2m.gz
# 1ktgA.t2k.a2m with 740 sequences, total weight= 740 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09466 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1ktgA/info/1ktgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1ktgA/nostruct-align/1ktgA.t2k.a2m.gz, have 377506 columns in 1657 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g61A/nostruct-align/1g61A.t2k.a2m.gz
# 1g61A.t2k.a2m with 56 sequences, total weight= 10.3734 avg weight= 0.185239 29 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g61A/info/1g61A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1g61A/nostruct-align/1g61A.t2k.a2m.gz, have 377731 columns in 1658 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ockA/nostruct-align/1ockA.t2k.a2m.gz
# 1ockA.t2k.a2m with 408 sequences, total weight= 166.985 avg weight= 0.409276 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30647 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ockA/info/1ockA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1ockA/nostruct-align/1ockA.t2k.a2m.gz, have 378143 columns in 1659 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2ou6A/nostruct-align/2ou6A.t2k.a2m.gz
# 2ou6A.t2k.a2m with 59 sequences, total weight= 59 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11165 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2ou6A/info/2ou6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2ou6A/nostruct-align/2ou6A.t2k.a2m.gz, have 378326 columns in 1660 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nqwA/nostruct-align/2nqwA.t2k.a2m.gz
# 2nqwA.t2k.a2m with 883 sequences, total weight= 118.494 avg weight= 0.134194 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30534 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nqwA/info/2nqwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2n/2nqwA/nostruct-align/2nqwA.t2k.a2m.gz, have 378413 columns in 1661 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2df8A/nostruct-align/2df8A.t2k.a2m.gz
# 2df8A.t2k.a2m with 1025 sequences, total weight= 400.564 avg weight= 0.390794 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3117 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2df8A/info/2df8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2df8A/nostruct-align/2df8A.t2k.a2m.gz, have 378738 columns in 1662 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2c4eA/nostruct-align/2c4eA.t2k.a2m.gz
# 2c4eA.t2k.a2m with 2217 sequences, total weight= 2217 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06019 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2c4eA/info/2c4eA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2c4eA/nostruct-align/2c4eA.t2k.a2m.gz, have 379037 columns in 1663 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vc4A/nostruct-align/1vc4A.t2k.a2m.gz
# 1vc4A.t2k.a2m with 751 sequences, total weight= 30.5477 avg weight= 0.040676 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vc4A/info/1vc4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vc4A/nostruct-align/1vc4A.t2k.a2m.gz, have 379291 columns in 1664 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vcc/nostruct-align/1vcc.t2k.a2m.gz
# 1vcc.t2k.a2m with 26 sequences, total weight= 4.49533 avg weight= 0.172897 18 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vcc/info/1vcc.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vcc/nostruct-align/1vcc.t2k.a2m.gz, have 379368 columns in 1665 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cvzA/nostruct-align/2cvzA.t2k.a2m.gz
# 2cvzA.t2k.a2m with 1367 sequences, total weight= 1367 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24182 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cvzA/info/2cvzA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cvzA/nostruct-align/2cvzA.t2k.a2m.gz, have 379656 columns in 1666 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bkmA/nostruct-align/2bkmA.t2k.a2m.gz
# 2bkmA.t2k.a2m with 356 sequences, total weight= 194.874 avg weight= 0.547398 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30145 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bkmA/info/2bkmA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bkmA/nostruct-align/2bkmA.t2k.a2m.gz, have 379784 columns in 1667 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bv5A/nostruct-align/2bv5A.t2k.a2m.gz
# 2bv5A.t2k.a2m with 1904 sequences, total weight= 940.313 avg weight= 0.493862 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.315 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bv5A/info/2bv5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bv5A/nostruct-align/2bv5A.t2k.a2m.gz, have 380066 columns in 1668 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cg5A/nostruct-align/1cg5A.t2k.a2m.gz
# 1cg5A.t2k.a2m with 1256 sequences, total weight= 56.8763 avg weight= 0.0452837 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.302 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cg5A/info/1cg5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1cg5A/nostruct-align/1cg5A.t2k.a2m.gz, have 380207 columns in 1669 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sjwA/nostruct-align/1sjwA.t2k.a2m.gz
# 1sjwA.t2k.a2m with 40 sequences, total weight= 40 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27216 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sjwA/info/1sjwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1sjwA/nostruct-align/1sjwA.t2k.a2m.gz, have 380349 columns in 1670 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f2tB/nostruct-align/1f2tB.t2k.a2m.gz
# 1f2tB.t2k.a2m with 10338 sequences, total weight= 10338 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.258 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f2tB/info/1f2tB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1f2tB/nostruct-align/1f2tB.t2k.a2m.gz, have 380492 columns in 1671 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1su8A/nostruct-align/1su8A.t2k.a2m.gz
# 1su8A.t2k.a2m with 110 sequences, total weight= 34.618 avg weight= 0.314709 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1su8A/info/1su8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1su8A/nostruct-align/1su8A.t2k.a2m.gz, have 381125 columns in 1672 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xk4A/nostruct-align/1xk4A.t2k.a2m.gz
# 1xk4A.t2k.a2m with 342 sequences, total weight= 28.9281 avg weight= 0.084585 43 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xk4A/info/1xk4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xk4A/nostruct-align/1xk4A.t2k.a2m.gz, have 381212 columns in 1673 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2de6A/nostruct-align/2de6A.t2k.a2m.gz
# 2de6A.t2k.a2m with 1443 sequences, total weight= 1443 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.885146 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2de6A/info/2de6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2de6A/nostruct-align/2de6A.t2k.a2m.gz, have 381601 columns in 1674 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p2fA/nostruct-align/1p2fA.t2k.a2m.gz
# 1p2fA.t2k.a2m with 4618 sequences, total weight= 4618 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18591 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p2fA/info/1p2fA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1p2fA/nostruct-align/1p2fA.t2k.a2m.gz, have 381818 columns in 1675 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pbjA/nostruct-align/1pbjA.t2k.a2m.gz
# 1pbjA.t2k.a2m with 1239 sequences, total weight= 1239 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23402 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pbjA/info/1pbjA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pbjA/nostruct-align/1pbjA.t2k.a2m.gz, have 381938 columns in 1676 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ufiA/nostruct-align/1ufiA.t2k.a2m.gz
# 1ufiA.t2k.a2m with 12 sequences, total weight= 1.92833 avg weight= 0.160694 7 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ufiA/info/1ufiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1ufiA/nostruct-align/1ufiA.t2k.a2m.gz, have 381986 columns in 1677 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2aydA/nostruct-align/2aydA.t2k.a2m.gz
# 2aydA.t2k.a2m with 644 sequences, total weight= 16.9037 avg weight= 0.026248 39 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2aydA/info/2aydA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2aydA/nostruct-align/2aydA.t2k.a2m.gz, have 382062 columns in 1678 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vm9A/nostruct-align/1vm9A.t2k.a2m.gz
# 1vm9A.t2k.a2m with 593 sequences, total weight= 376.638 avg weight= 0.63514 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30533 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vm9A/info/1vm9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vm9A/nostruct-align/1vm9A.t2k.a2m.gz, have 382171 columns in 1679 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sixA/nostruct-align/1sixA.t2k.a2m.gz
# 1sixA.t2k.a2m with 508 sequences, total weight= 172.499 avg weight= 0.339564 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30254 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sixA/info/1sixA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1sixA/nostruct-align/1sixA.t2k.a2m.gz, have 382324 columns in 1680 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fg7A/nostruct-align/1fg7A.t2k.a2m.gz
# 1fg7A.t2k.a2m with 815 sequences, total weight= 815 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09889 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fg7A/info/1fg7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fg7A/nostruct-align/1fg7A.t2k.a2m.gz, have 382678 columns in 1681 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2dg5B/nostruct-align/2dg5B.t2k.a2m.gz
# 2dg5B.t2k.a2m with 719 sequences, total weight= 60.3737 avg weight= 0.083969 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30118 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2dg5B/info/2dg5B.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2dg5B/nostruct-align/2dg5B.t2k.a2m.gz, have 382868 columns in 1682 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2czqA/nostruct-align/2czqA.t2k.a2m.gz
# 2czqA.t2k.a2m with 190 sequences, total weight= 120.646 avg weight= 0.634978 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2czqA/info/2czqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2czqA/nostruct-align/2czqA.t2k.a2m.gz, have 383073 columns in 1683 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x8dA/nostruct-align/1x8dA.t2k.a2m.gz
# 1x8dA.t2k.a2m with 63 sequences, total weight= 24.3532 avg weight= 0.386559 38 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x8dA/info/1x8dA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1x8dA/nostruct-align/1x8dA.t2k.a2m.gz, have 383177 columns in 1684 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pbyA/nostruct-align/1pbyA.t2k.a2m.gz
# 1pbyA.t2k.a2m with 22 sequences, total weight= 8.75419 avg weight= 0.397918 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pbyA/info/1pbyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pbyA/nostruct-align/1pbyA.t2k.a2m.gz, have 383666 columns in 1685 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fcwB/nostruct-align/2fcwB.t2k.a2m.gz
# 2fcwB.t2k.a2m with 2503 sequences, total weight= 90.734 avg weight= 0.0362501 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30322 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fcwB/info/2fcwB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fcwB/nostruct-align/2fcwB.t2k.a2m.gz, have 383744 columns in 1686 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2a40B/nostruct-align/2a40B.t2k.a2m.gz
# 2a40B.t2k.a2m with 130 sequences, total weight= 54.9903 avg weight= 0.423003 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2a40B/info/2a40B.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2a40B/nostruct-align/2a40B.t2k.a2m.gz, have 384004 columns in 1687 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zd8A/nostruct-align/1zd8A.t2k.a2m.gz
# 1zd8A.t2k.a2m with 940 sequences, total weight= 330.033 avg weight= 0.351099 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3092 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zd8A/info/1zd8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zd8A/nostruct-align/1zd8A.t2k.a2m.gz, have 384216 columns in 1688 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wpnA/nostruct-align/1wpnA.t2k.a2m.gz
# 1wpnA.t2k.a2m with 256 sequences, total weight= 256 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27849 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wpnA/info/1wpnA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wpnA/nostruct-align/1wpnA.t2k.a2m.gz, have 384403 columns in 1689 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2dg1A/nostruct-align/2dg1A.t2k.a2m.gz
# 2dg1A.t2k.a2m with 893 sequences, total weight= 893 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03162 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2dg1A/info/2dg1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2dg1A/nostruct-align/2dg1A.t2k.a2m.gz, have 384724 columns in 1690 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hs1A/nostruct-align/2hs1A.t2k.a2m.gz
# 2hs1A.t2k.a2m with 20002 sequences, total weight= 2.48594 avg weight= 0.000124284 23 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hs1A/info/2hs1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hs1A/nostruct-align/2hs1A.t2k.a2m.gz, have 384823 columns in 1691 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qopB/nostruct-align/1qopB.t2k.a2m.gz
# 1qopB.t2k.a2m with 462 sequences, total weight= 137.82 avg weight= 0.298312 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30279 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qopB/info/1qopB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qopB/nostruct-align/1qopB.t2k.a2m.gz, have 385213 columns in 1692 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2h1cA/nostruct-align/2h1cA.t2k.a2m.gz
# 2h1cA.t2k.a2m with 253 sequences, total weight= 57.2682 avg weight= 0.226356 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3006 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2h1cA/info/2h1cA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2h1cA/nostruct-align/2h1cA.t2k.a2m.gz, have 385352 columns in 1693 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cb8A/nostruct-align/2cb8A.t2k.a2m.gz
# 2cb8A.t2k.a2m with 439 sequences, total weight= 46.4576 avg weight= 0.105826 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cb8A/info/2cb8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cb8A/nostruct-align/2cb8A.t2k.a2m.gz, have 385438 columns in 1694 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l3lA/nostruct-align/1l3lA.t2k.a2m.gz
# 1l3lA.t2k.a2m with 407 sequences, total weight= 407 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12555 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l3lA/info/1l3lA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1l3lA/nostruct-align/1l3lA.t2k.a2m.gz, have 385671 columns in 1695 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gwmA/nostruct-align/1gwmA.t2k.a2m.gz
# 1gwmA.t2k.a2m with 13 sequences, total weight= 2.85753 avg weight= 0.21981 12 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gwmA/info/1gwmA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gwmA/nostruct-align/1gwmA.t2k.a2m.gz, have 385824 columns in 1696 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wcuA/nostruct-align/1wcuA.t2k.a2m.gz
# 1wcuA.t2k.a2m with 13 sequences, total weight= 2.81017 avg weight= 0.216167 12 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wcuA/info/1wcuA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wcuA/nostruct-align/1wcuA.t2k.a2m.gz, have 385973 columns in 1697 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d0dA/nostruct-align/1d0dA.t2k.a2m.gz
# 1d0dA.t2k.a2m with 6 sequences, total weight= 2.20965 avg weight= 0.368274 9 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d0dA/info/1d0dA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1d0dA/nostruct-align/1d0dA.t2k.a2m.gz, have 386033 columns in 1698 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vjvA/nostruct-align/1vjvA.t2k.a2m.gz
# 1vjvA.t2k.a2m with 996 sequences, total weight= 996 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11537 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vjvA/info/1vjvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vjvA/nostruct-align/1vjvA.t2k.a2m.gz, have 386400 columns in 1699 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fvkA/nostruct-align/1fvkA.t2k.a2m.gz
# 1fvkA.t2k.a2m with 165 sequences, total weight= 165 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29372 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fvkA/info/1fvkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fvkA/nostruct-align/1fvkA.t2k.a2m.gz, have 386588 columns in 1700 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ibyA/nostruct-align/1ibyA.t2k.a2m.gz
# 1ibyA.t2k.a2m with 1001 sequences, total weight= 38.4085 avg weight= 0.0383702 45 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ibyA/info/1ibyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1ibyA/nostruct-align/1ibyA.t2k.a2m.gz, have 386700 columns in 1701 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pmi/nostruct-align/1pmi.t2k.a2m.gz
# 1pmi.t2k.a2m with 93 sequences, total weight= 47.7646 avg weight= 0.513598 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pmi/info/1pmi.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pmi/nostruct-align/1pmi.t2k.a2m.gz, have 387140 columns in 1702 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uaiA/nostruct-align/1uaiA.t2k.a2m.gz
# 1uaiA.t2k.a2m with 34 sequences, total weight= 19.6028 avg weight= 0.576554 31 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uaiA/info/1uaiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uaiA/nostruct-align/1uaiA.t2k.a2m.gz, have 387363 columns in 1703 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q1aA/nostruct-align/1q1aA.t2k.a2m.gz
# 1q1aA.t2k.a2m with 255 sequences, total weight= 100.02 avg weight= 0.392237 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30082 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q1aA/info/1q1aA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1q1aA/nostruct-align/1q1aA.t2k.a2m.gz, have 387648 columns in 1704 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wmhB/nostruct-align/1wmhB.t2k.a2m.gz
# 1wmhB.t2k.a2m with 33 sequences, total weight= 3.88942 avg weight= 0.117861 18 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wmhB/info/1wmhB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wmhB/nostruct-align/1wmhB.t2k.a2m.gz, have 387730 columns in 1705 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1ve1A/nostruct-align/1ve1A.t2k.a2m.gz
# 1ve1A.t2k.a2m with 1580 sequences, total weight= 354.497 avg weight= 0.224365 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32451 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1ve1A/info/1ve1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1ve1A/nostruct-align/1ve1A.t2k.a2m.gz, have 388032 columns in 1706 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jr8A/nostruct-align/1jr8A.t2k.a2m.gz
# 1jr8A.t2k.a2m with 80 sequences, total weight= 30.2229 avg weight= 0.377787 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jr8A/info/1jr8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jr8A/nostruct-align/1jr8A.t2k.a2m.gz, have 388137 columns in 1707 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tfzA/nostruct-align/1tfzA.t2k.a2m.gz
# 1tfzA.t2k.a2m with 181 sequences, total weight= 40.1527 avg weight= 0.221838 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tfzA/info/1tfzA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tfzA/nostruct-align/1tfzA.t2k.a2m.gz, have 388501 columns in 1708 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2h26A/nostruct-align/2h26A.t2k.a2m.gz
# 2h26A.t2k.a2m with 9804 sequences, total weight= 7632.34 avg weight= 0.778492 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30818 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2h26A/info/2h26A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2h26A/nostruct-align/2h26A.t2k.a2m.gz, have 388784 columns in 1709 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1evhA/nostruct-align/1evhA.t2k.a2m.gz
# 1evhA.t2k.a2m with 104 sequences, total weight= 8.45557 avg weight= 0.0813035 26 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1evhA/info/1evhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1evhA/nostruct-align/1evhA.t2k.a2m.gz, have 388895 columns in 1710 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eexA/nostruct-align/1eexA.t2k.a2m.gz
# 1eexA.t2k.a2m with 20 sequences, total weight= 3.0197 avg weight= 0.150985 13 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eexA/info/1eexA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1eexA/nostruct-align/1eexA.t2k.a2m.gz, have 389446 columns in 1711 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mg7A/nostruct-align/1mg7A.t2k.a2m.gz
# 1mg7A.t2k.a2m with 6 sequences, total weight= 3.6794 avg weight= 0.613234 10 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mg7A/info/1mg7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mg7A/nostruct-align/1mg7A.t2k.a2m.gz, have 389797 columns in 1712 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1z41A/nostruct-align/1z41A.t2k.a2m.gz
# 1z41A.t2k.a2m with 785 sequences, total weight= 156.797 avg weight= 0.199742 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3104 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1z41A/info/1z41A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1z41A/nostruct-align/1z41A.t2k.a2m.gz, have 390134 columns in 1713 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1atg/nostruct-align/1atg.t2k.a2m.gz
# 1atg.t2k.a2m with 135 sequences, total weight= 91.5498 avg weight= 0.678147 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30045 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1atg/info/1atg.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1atg/nostruct-align/1atg.t2k.a2m.gz, have 390365 columns in 1714 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2ookA/nostruct-align/2ookA.t2k.a2m.gz
# 2ookA.t2k.a2m with 114 sequences, total weight= 97.279 avg weight= 0.853324 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2ookA/info/2ookA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2ookA/nostruct-align/2ookA.t2k.a2m.gz, have 390490 columns in 1715 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fc6A/nostruct-align/1fc6A.t2k.a2m.gz
# 1fc6A.t2k.a2m with 818 sequences, total weight= 818 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28917 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fc6A/info/1fc6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fc6A/nostruct-align/1fc6A.t2k.a2m.gz, have 390876 columns in 1716 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mtyG/nostruct-align/1mtyG.t2k.a2m.gz
# 1mtyG.t2k.a2m with 16 sequences, total weight= 4.2624 avg weight= 0.2664 17 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mtyG/info/1mtyG.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mtyG/nostruct-align/1mtyG.t2k.a2m.gz, have 391038 columns in 1717 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jekA/nostruct-align/1jekA.t2k.a2m.gz
# 1jekA.t2k.a2m with 38 sequences, total weight= 2.21208 avg weight= 0.0582126 9 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jekA/info/1jekA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jekA/nostruct-align/1jekA.t2k.a2m.gz, have 391078 columns in 1718 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u53A/nostruct-align/1u53A.t2k.a2m.gz
# 1u53A.t2k.a2m with 710 sequences, total weight= 710 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26331 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u53A/info/1u53A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1u53A/nostruct-align/1u53A.t2k.a2m.gz, have 391271 columns in 1719 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sx7A/nostruct-align/1sx7A.t2k.a2m.gz
# 1sx7A.t2k.a2m with 385 sequences, total weight= 20.8981 avg weight= 0.0542807 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sx7A/info/1sx7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1sx7A/nostruct-align/1sx7A.t2k.a2m.gz, have 391435 columns in 1720 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s29A/nostruct-align/1s29A.t2k.a2m.gz
# 1s29A.t2k.a2m with 148 sequences, total weight= 22.4119 avg weight= 0.151432 44 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s29A/info/1s29A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1s29A/nostruct-align/1s29A.t2k.a2m.gz, have 391527 columns in 1721 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yn8A/nostruct-align/1yn8A.t2k.a2m.gz
# 1yn8A.t2k.a2m with 3909 sequences, total weight= 66.66 avg weight= 0.017053 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30509 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yn8A/info/1yn8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yn8A/nostruct-align/1yn8A.t2k.a2m.gz, have 391586 columns in 1722 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kyhA/nostruct-align/1kyhA.t2k.a2m.gz
# 1kyhA.t2k.a2m with 236 sequences, total weight= 205.14 avg weight= 0.869237 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30073 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kyhA/info/1kyhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kyhA/nostruct-align/1kyhA.t2k.a2m.gz, have 391854 columns in 1723 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x54A/nostruct-align/1x54A.t2k.a2m.gz
# 1x54A.t2k.a2m with 1764 sequences, total weight= 195.09 avg weight= 0.110595 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3214 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x54A/info/1x54A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1x54A/nostruct-align/1x54A.t2k.a2m.gz, have 392288 columns in 1724 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x1nA/nostruct-align/1x1nA.t2k.a2m.gz
# 1x1nA.t2k.a2m with 303 sequences, total weight= 54.9666 avg weight= 0.181408 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30047 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x1nA/info/1x1nA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1x1nA/nostruct-align/1x1nA.t2k.a2m.gz, have 392811 columns in 1725 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nu0A/nostruct-align/1nu0A.t2k.a2m.gz
# 1nu0A.t2k.a2m with 176 sequences, total weight= 31.091 avg weight= 0.176653 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nu0A/info/1nu0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nu0A/nostruct-align/1nu0A.t2k.a2m.gz, have 392942 columns in 1726 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xdnA/nostruct-align/1xdnA.t2k.a2m.gz
# 1xdnA.t2k.a2m with 15 sequences, total weight= 5.37853 avg weight= 0.358568 17 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xdnA/info/1xdnA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xdnA/nostruct-align/1xdnA.t2k.a2m.gz, have 393207 columns in 1727 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2o3fA/nostruct-align/2o3fA.t2k.a2m.gz
# 2o3fA.t2k.a2m with 754 sequences, total weight= 82.5442 avg weight= 0.109475 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30109 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2o3fA/info/2o3fA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2o3fA/nostruct-align/2o3fA.t2k.a2m.gz, have 393290 columns in 1728 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sgpE/nostruct-align/1sgpE.t2k.a2m.gz
# 1sgpE.t2k.a2m with 498 sequences, total weight= 247.011 avg weight= 0.496005 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30626 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sgpE/info/1sgpE.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1sgpE/nostruct-align/1sgpE.t2k.a2m.gz, have 393475 columns in 1729 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w2lA/nostruct-align/1w2lA.t2k.a2m.gz
# 1w2lA.t2k.a2m with 395 sequences, total weight= 71.4251 avg weight= 0.180823 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30032 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w2lA/info/1w2lA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w2lA/nostruct-align/1w2lA.t2k.a2m.gz, have 393572 columns in 1730 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2grrA/nostruct-align/2grrA.t2k.a2m.gz
# 2grrA.t2k.a2m with 1867 sequences, total weight= 243.944 avg weight= 0.130661 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32121 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2grrA/info/2grrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2grrA/nostruct-align/2grrA.t2k.a2m.gz, have 393729 columns in 1731 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1woqA/nostruct-align/1woqA.t2k.a2m.gz
# 1woqA.t2k.a2m with 720 sequences, total weight= 720 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24498 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1woqA/info/1woqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1woqA/nostruct-align/1woqA.t2k.a2m.gz, have 393982 columns in 1732 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lv7A/nostruct-align/1lv7A.t2k.a2m.gz
# 1lv7A.t2k.a2m with 2949 sequences, total weight= 2949 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13228 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lv7A/info/1lv7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lv7A/nostruct-align/1lv7A.t2k.a2m.gz, have 394233 columns in 1733 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xubA/nostruct-align/1xubA.t2k.a2m.gz
# 1xubA.t2k.a2m with 227 sequences, total weight= 89.8059 avg weight= 0.395621 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30217 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xubA/info/1xubA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xubA/nostruct-align/1xubA.t2k.a2m.gz, have 394511 columns in 1734 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2p/2por/nostruct-align/2por.t2k.a2m.gz
# 2por.t2k.a2m with 278 sequences, total weight= 129.876 avg weight= 0.46718 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30297 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2p/2por/info/2por.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2p/2por/nostruct-align/2por.t2k.a2m.gz, have 394812 columns in 1735 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s9uA/nostruct-align/1s9uA.t2k.a2m.gz
# 1s9uA.t2k.a2m with 89 sequences, total weight= 79.3771 avg weight= 0.891877 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s9uA/info/1s9uA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1s9uA/nostruct-align/1s9uA.t2k.a2m.gz, have 395013 columns in 1736 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2d2eA/nostruct-align/2d2eA.t2k.a2m.gz
# 2d2eA.t2k.a2m with 23045 sequences, total weight= 23045 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29136 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2d2eA/info/2d2eA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2d2eA/nostruct-align/2d2eA.t2k.a2m.gz, have 395252 columns in 1737 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hlyA/nostruct-align/2hlyA.t2k.a2m.gz
# 2hlyA.t2k.a2m with 6 sequences, total weight= 4.63006 avg weight= 0.771676 13 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hlyA/info/2hlyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hlyA/nostruct-align/2hlyA.t2k.a2m.gz, have 395457 columns in 1738 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yksA/nostruct-align/1yksA.t2k.a2m.gz
# 1yksA.t2k.a2m with 1457 sequences, total weight= 1457 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20551 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yksA/info/1yksA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yksA/nostruct-align/1yksA.t2k.a2m.gz, have 395888 columns in 1739 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bjbA/nostruct-align/2bjbA.t2k.a2m.gz
# 2bjbA.t2k.a2m with 878 sequences, total weight= 107.139 avg weight= 0.122026 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30643 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bjbA/info/2bjbA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bjbA/nostruct-align/2bjbA.t2k.a2m.gz, have 396309 columns in 1740 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k0mA/nostruct-align/1k0mA.t2k.a2m.gz
# 1k0mA.t2k.a2m with 283 sequences, total weight= 283 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2285 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k0mA/info/1k0mA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1k0mA/nostruct-align/1k0mA.t2k.a2m.gz, have 396544 columns in 1741 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xocA/nostruct-align/1xocA.t2k.a2m.gz
# 1xocA.t2k.a2m with 1528 sequences, total weight= 1528 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0626 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xocA/info/1xocA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xocA/nostruct-align/1xocA.t2k.a2m.gz, have 397048 columns in 1742 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i2mA/nostruct-align/1i2mA.t2k.a2m.gz
# 1i2mA.t2k.a2m with 1707 sequences, total weight= 257.966 avg weight= 0.151122 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32333 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i2mA/info/1i2mA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1i2mA/nostruct-align/1i2mA.t2k.a2m.gz, have 397213 columns in 1743 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hx0A/nostruct-align/1hx0A.t2k.a2m.gz
# 1hx0A.t2k.a2m with 651 sequences, total weight= 651 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20612 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hx0A/info/1hx0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hx0A/nostruct-align/1hx0A.t2k.a2m.gz, have 397709 columns in 1744 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uz3A/nostruct-align/1uz3A.t2k.a2m.gz
# 1uz3A.t2k.a2m with 45 sequences, total weight= 10.1835 avg weight= 0.226299 23 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uz3A/info/1uz3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uz3A/nostruct-align/1uz3A.t2k.a2m.gz, have 397811 columns in 1745 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y0hA/nostruct-align/1y0hA.t2k.a2m.gz
# 1y0hA.t2k.a2m with 175 sequences, total weight= 149.145 avg weight= 0.852255 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y0hA/info/1y0hA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1y0hA/nostruct-align/1y0hA.t2k.a2m.gz, have 397912 columns in 1746 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dfmA/nostruct-align/1dfmA.t2k.a2m.gz
# 1dfmA.t2k.a2m with 14 sequences, total weight= 12.2636 avg weight= 0.875975 14 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dfmA/info/1dfmA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dfmA/nostruct-align/1dfmA.t2k.a2m.gz, have 398135 columns in 1747 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xkgA/nostruct-align/1xkgA.t2k.a2m.gz
# 1xkgA.t2k.a2m with 1942 sequences, total weight= 741.498 avg weight= 0.381822 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31788 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xkgA/info/1xkgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xkgA/nostruct-align/1xkgA.t2k.a2m.gz, have 398433 columns in 1748 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ekgA/nostruct-align/1ekgA.t2k.a2m.gz
# 1ekgA.t2k.a2m with 66 sequences, total weight= 16.1616 avg weight= 0.244872 30 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ekgA/info/1ekgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1ekgA/nostruct-align/1ekgA.t2k.a2m.gz, have 398552 columns in 1749 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v33A/nostruct-align/1v33A.t2k.a2m.gz
# 1v33A.t2k.a2m with 67 sequences, total weight= 53.6875 avg weight= 0.801306 43 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v33A/info/1v33A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v33A/nostruct-align/1v33A.t2k.a2m.gz, have 398898 columns in 1750 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2j6bA/nostruct-align/2j6bA.t2k.a2m.gz
# 2j6bA.t2k.a2m with 12 sequences, total weight= 8.84457 avg weight= 0.737048 20 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2j6bA/info/2j6bA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2j6bA/nostruct-align/2j6bA.t2k.a2m.gz, have 399007 columns in 1751 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ymiA/nostruct-align/1ymiA.t2k.a2m.gz
# 1ymiA.t2k.a2m with 19047 sequences, total weight= 19047 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11281 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ymiA/info/1ymiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1ymiA/nostruct-align/1ymiA.t2k.a2m.gz, have 399341 columns in 1752 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wn5A/nostruct-align/1wn5A.t2k.a2m.gz
# 1wn5A.t2k.a2m with 320 sequences, total weight= 66.8256 avg weight= 0.20883 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30052 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wn5A/info/1wn5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wn5A/nostruct-align/1wn5A.t2k.a2m.gz, have 399466 columns in 1753 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hz6A/nostruct-align/1hz6A.t2k.a2m.gz
# 1hz6A.t2k.a2m with 16 sequences, total weight= 2.78215 avg weight= 0.173884 11 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hz6A/info/1hz6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hz6A/nostruct-align/1hz6A.t2k.a2m.gz, have 399533 columns in 1754 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fvgA/nostruct-align/1fvgA.t2k.a2m.gz
# 1fvgA.t2k.a2m with 284 sequences, total weight= 19.2011 avg weight= 0.0676094 43 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fvgA/info/1fvgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fvgA/nostruct-align/1fvgA.t2k.a2m.gz, have 399725 columns in 1755 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k66A/nostruct-align/1k66A.t2k.a2m.gz
# 1k66A.t2k.a2m with 5155 sequences, total weight= 2695.16 avg weight= 0.522825 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31905 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k66A/info/1k66A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1k66A/nostruct-align/1k66A.t2k.a2m.gz, have 399874 columns in 1756 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wlzA/nostruct-align/1wlzA.t2k.a2m.gz
# 1wlzA.t2k.a2m with 1700 sequences, total weight= 153.534 avg weight= 0.0903139 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30663 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wlzA/info/1wlzA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wlzA/nostruct-align/1wlzA.t2k.a2m.gz, have 399959 columns in 1757 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2d1sA/nostruct-align/2d1sA.t2k.a2m.gz
# 2d1sA.t2k.a2m with 9236 sequences, total weight= 9236 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08677 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2d1sA/info/2d1sA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2d1sA/nostruct-align/2d1sA.t2k.a2m.gz, have 400498 columns in 1758 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g8eA/nostruct-align/1g8eA.t2k.a2m.gz
# 1g8eA.t2k.a2m with 21 sequences, total weight= 5.4537 avg weight= 0.2597 18 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g8eA/info/1g8eA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1g8eA/nostruct-align/1g8eA.t2k.a2m.gz, have 400596 columns in 1759 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2ckkA/nostruct-align/2ckkA.t2k.a2m.gz
# 2ckkA.t2k.a2m with 88 sequences, total weight= 35.1678 avg weight= 0.399634 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2ckkA/info/2ckkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2ckkA/nostruct-align/2ckkA.t2k.a2m.gz, have 400716 columns in 1760 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1ne2A/nostruct-align/1ne2A.t2k.a2m.gz
# 1ne2A.t2k.a2m with 806 sequences, total weight= 806 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.969389 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1ne2A/info/1ne2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1ne2A/nostruct-align/1ne2A.t2k.a2m.gz, have 400892 columns in 1761 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uv7A/nostruct-align/1uv7A.t2k.a2m.gz
# 1uv7A.t2k.a2m with 29 sequences, total weight= 10.2638 avg weight= 0.353925 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uv7A/info/1uv7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uv7A/nostruct-align/1uv7A.t2k.a2m.gz, have 400968 columns in 1762 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u0kA/nostruct-align/1u0kA.t2k.a2m.gz
# 1u0kA.t2k.a2m with 195 sequences, total weight= 85.4209 avg weight= 0.438056 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3015 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u0kA/info/1u0kA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1u0kA/nostruct-align/1u0kA.t2k.a2m.gz, have 401252 columns in 1763 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fdiA/nostruct-align/2fdiA.t2k.a2m.gz
# 2fdiA.t2k.a2m with 247 sequences, total weight= 247 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16944 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fdiA/info/2fdiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fdiA/nostruct-align/2fdiA.t2k.a2m.gz, have 401451 columns in 1764 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ooyA/nostruct-align/1ooyA.t2k.a2m.gz
# 1ooyA.t2k.a2m with 405 sequences, total weight= 136.793 avg weight= 0.337761 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30067 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ooyA/info/1ooyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1ooyA/nostruct-align/1ooyA.t2k.a2m.gz, have 401914 columns in 1765 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2agyA/nostruct-align/2agyA.t2k.a2m.gz
# 2agyA.t2k.a2m with 49 sequences, total weight= 23.4908 avg weight= 0.479404 30 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2agyA/info/2agyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2agyA/nostruct-align/2agyA.t2k.a2m.gz, have 402274 columns in 1766 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bs0A/nostruct-align/1bs0A.t2k.a2m.gz
# 1bs0A.t2k.a2m with 638 sequences, total weight= 638 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11784 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bs0A/info/1bs0A.stride-mixed.strand_sep
WARNING: skipping u, since it is lower case.
# After reading /projects/compbio/experiments/models.97/pdb/1b/1bs0A/nostruct-align/1bs0A.t2k.a2m.gz, have 402656 columns in 1767 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sbxA/nostruct-align/1sbxA.t2k.a2m.gz
# 1sbxA.t2k.a2m with 100 sequences, total weight= 7.10312 avg weight= 0.0710312 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sbxA/info/1sbxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1sbxA/nostruct-align/1sbxA.t2k.a2m.gz, have 402762 columns in 1768 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3s/3sil/nostruct-align/3sil.t2k.a2m.gz
# 3sil.t2k.a2m with 151 sequences, total weight= 151 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28786 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3s/3sil/info/3sil.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/3s/3sil/nostruct-align/3sil.t2k.a2m.gz, have 403140 columns in 1769 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1up9A/nostruct-align/1up9A.t2k.a2m.gz
# 1up9A.t2k.a2m with 78 sequences, total weight= 50.8644 avg weight= 0.652108 45 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1up9A/info/1up9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1up9A/nostruct-align/1up9A.t2k.a2m.gz, have 403247 columns in 1770 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cv8/nostruct-align/1cv8.t2k.a2m.gz
# 1cv8.t2k.a2m with 22 sequences, total weight= 2.76297 avg weight= 0.12559 12 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cv8/info/1cv8.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1cv8/nostruct-align/1cv8.t2k.a2m.gz, have 403420 columns in 1771 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c0pA/nostruct-align/1c0pA.t2k.a2m.gz
# 1c0pA.t2k.a2m with 325 sequences, total weight= 325 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.915443 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c0pA/info/1c0pA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1c0pA/nostruct-align/1c0pA.t2k.a2m.gz, have 403783 columns in 1772 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r6vA/nostruct-align/1r6vA.t2k.a2m.gz
# 1r6vA.t2k.a2m with 1462 sequences, total weight= 1462 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05439 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r6vA/info/1r6vA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r6vA/nostruct-align/1r6vA.t2k.a2m.gz, have 404454 columns in 1773 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xffA/nostruct-align/1xffA.t2k.a2m.gz
# 1xffA.t2k.a2m with 967 sequences, total weight= 341.551 avg weight= 0.353206 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31686 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xffA/info/1xffA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xffA/nostruct-align/1xffA.t2k.a2m.gz, have 404692 columns in 1774 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nw2A/nostruct-align/2nw2A.t2k.a2m.gz
# 2nw2A.t2k.a2m with 20705 sequences, total weight= 1609.06 avg weight= 0.0777136 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.37213 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nw2A/info/2nw2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2n/2nw2A/nostruct-align/2nw2A.t2k.a2m.gz, have 404888 columns in 1775 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2c07A/nostruct-align/2c07A.t2k.a2m.gz
# 2c07A.t2k.a2m with 11932 sequences, total weight= 10666.4 avg weight= 0.893936 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3037 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2c07A/info/2c07A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2c07A/nostruct-align/2c07A.t2k.a2m.gz, have 405134 columns in 1776 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gv9A/nostruct-align/1gv9A.t2k.a2m.gz
# 1gv9A.t2k.a2m with 104 sequences, total weight= 50.8525 avg weight= 0.488967 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gv9A/info/1gv9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gv9A/nostruct-align/1gv9A.t2k.a2m.gz, have 405357 columns in 1777 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1koe/nostruct-align/1koe.t2k.a2m.gz
# 1koe.t2k.a2m with 48 sequences, total weight= 3.4876 avg weight= 0.0726583 17 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1koe/info/1koe.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1koe/nostruct-align/1koe.t2k.a2m.gz, have 405529 columns in 1778 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dfuP/nostruct-align/1dfuP.t2k.a2m.gz
# 1dfuP.t2k.a2m with 116 sequences, total weight= 26.8671 avg weight= 0.231613 44 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dfuP/info/1dfuP.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dfuP/nostruct-align/1dfuP.t2k.a2m.gz, have 405623 columns in 1779 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vj2A/nostruct-align/1vj2A.t2k.a2m.gz
# 1vj2A.t2k.a2m with 344 sequences, total weight= 344 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.977399 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vj2A/info/1vj2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vj2A/nostruct-align/1vj2A.t2k.a2m.gz, have 405737 columns in 1780 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2d1gA/nostruct-align/2d1gA.t2k.a2m.gz
# 2d1gA.t2k.a2m with 263 sequences, total weight= 263 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27727 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2d1gA/info/2d1gA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2d1gA/nostruct-align/2d1gA.t2k.a2m.gz, have 406218 columns in 1781 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2a4vA/nostruct-align/2a4vA.t2k.a2m.gz
# 2a4vA.t2k.a2m with 806 sequences, total weight= 140.333 avg weight= 0.17411 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30604 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2a4vA/info/2a4vA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2a4vA/nostruct-align/2a4vA.t2k.a2m.gz, have 406374 columns in 1782 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x2iA/nostruct-align/1x2iA.t2k.a2m.gz
# 1x2iA.t2k.a2m with 225 sequences, total weight= 26.9465 avg weight= 0.119762 44 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x2iA/info/1x2iA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1x2iA/nostruct-align/1x2iA.t2k.a2m.gz, have 406442 columns in 1783 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cc6A/nostruct-align/2cc6A.t2k.a2m.gz
# 2cc6A.t2k.a2m with 59 sequences, total weight= 6.35713 avg weight= 0.107748 27 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cc6A/info/2cc6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cc6A/nostruct-align/2cc6A.t2k.a2m.gz, have 406506 columns in 1784 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uwkA/nostruct-align/1uwkA.t2k.a2m.gz
# 1uwkA.t2k.a2m with 102 sequences, total weight= 5.53757 avg weight= 0.0542899 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uwkA/info/1uwkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uwkA/nostruct-align/1uwkA.t2k.a2m.gz, have 407060 columns in 1785 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2o28A/nostruct-align/2o28A.t2k.a2m.gz
# 2o28A.t2k.a2m with 107 sequences, total weight= 43.6123 avg weight= 0.407592 38 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2o28A/info/2o28A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2o28A/nostruct-align/2o28A.t2k.a2m.gz, have 407242 columns in 1786 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oaqL/nostruct-align/1oaqL.t2k.a2m.gz
# 1oaqL.t2k.a2m with 20375 sequences, total weight= 35.8227 avg weight= 0.00175817 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30071 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oaqL/info/1oaqL.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oaqL/nostruct-align/1oaqL.t2k.a2m.gz, have 407352 columns in 1787 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hdhA/nostruct-align/1hdhA.t2k.a2m.gz
# 1hdhA.t2k.a2m with 521 sequences, total weight= 521 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06572 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hdhA/info/1hdhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hdhA/nostruct-align/1hdhA.t2k.a2m.gz, have 407877 columns in 1788 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oi7A/nostruct-align/1oi7A.t2k.a2m.gz
# 1oi7A.t2k.a2m with 325 sequences, total weight= 50.5099 avg weight= 0.155415 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oi7A/info/1oi7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oi7A/nostruct-align/1oi7A.t2k.a2m.gz, have 408147 columns in 1789 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l7lA/nostruct-align/1l7lA.t2k.a2m.gz
# 1l7lA.t2k.a2m with 6 sequences, total weight= 2.67596 avg weight= 0.445993 11 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l7lA/info/1l7lA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1l7lA/nostruct-align/1l7lA.t2k.a2m.gz, have 408268 columns in 1790 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v77A/nostruct-align/1v77A.t2k.a2m.gz
# 1v77A.t2k.a2m with 26 sequences, total weight= 20.8441 avg weight= 0.801695 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v77A/info/1v77A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v77A/nostruct-align/1v77A.t2k.a2m.gz, have 408470 columns in 1791 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vp6A/nostruct-align/1vp6A.t2k.a2m.gz
# 1vp6A.t2k.a2m with 1291 sequences, total weight= 1291 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24743 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vp6A/info/1vp6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vp6A/nostruct-align/1vp6A.t2k.a2m.gz, have 408603 columns in 1792 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v5vA/nostruct-align/1v5vA.t2k.a2m.gz
# 1v5vA.t2k.a2m with 446 sequences, total weight= 231.281 avg weight= 0.518567 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30142 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v5vA/info/1v5vA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v5vA/nostruct-align/1v5vA.t2k.a2m.gz, have 409002 columns in 1793 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kolA/nostruct-align/1kolA.t2k.a2m.gz
# 1kolA.t2k.a2m with 1910 sequences, total weight= 1910 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23518 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kolA/info/1kolA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kolA/nostruct-align/1kolA.t2k.a2m.gz, have 409398 columns in 1794 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yo3A/nostruct-align/1yo3A.t2k.a2m.gz
# 1yo3A.t2k.a2m with 140 sequences, total weight= 21.7386 avg weight= 0.155276 42 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yo3A/info/1yo3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yo3A/nostruct-align/1yo3A.t2k.a2m.gz, have 409483 columns in 1795 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g2qA/nostruct-align/1g2qA.t2k.a2m.gz
# 1g2qA.t2k.a2m with 367 sequences, total weight= 365.234 avg weight= 0.995187 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g2qA/info/1g2qA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1g2qA/nostruct-align/1g2qA.t2k.a2m.gz, have 409661 columns in 1796 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l9lA/nostruct-align/1l9lA.t2k.a2m.gz
# 1l9lA.t2k.a2m with 135 sequences, total weight= 60.0092 avg weight= 0.444513 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30119 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l9lA/info/1l9lA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1l9lA/nostruct-align/1l9lA.t2k.a2m.gz, have 409735 columns in 1797 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x91A/nostruct-align/1x91A.t2k.a2m.gz
# 1x91A.t2k.a2m with 164 sequences, total weight= 164 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15393 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x91A/info/1x91A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1x91A/nostruct-align/1x91A.t2k.a2m.gz, have 409884 columns in 1798 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vlpA/nostruct-align/1vlpA.t2k.a2m.gz
# 1vlpA.t2k.a2m with 192 sequences, total weight= 30.7523 avg weight= 0.160168 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vlpA/info/1vlpA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vlpA/nostruct-align/1vlpA.t2k.a2m.gz, have 410302 columns in 1799 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hfeS/nostruct-align/1hfeS.t2k.a2m.gz
# 1hfeS.t2k.a2m with 40 sequences, total weight= 13.6681 avg weight= 0.341703 26 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hfeS/info/1hfeS.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hfeS/nostruct-align/1hfeS.t2k.a2m.gz, have 410390 columns in 1800 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jw9B/nostruct-align/1jw9B.t2k.a2m.gz
# 1jw9B.t2k.a2m with 558 sequences, total weight= 558 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28986 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jw9B/info/1jw9B.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jw9B/nostruct-align/1jw9B.t2k.a2m.gz, have 410630 columns in 1801 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h03P/nostruct-align/1h03P.t2k.a2m.gz
# 1h03P.t2k.a2m with 1416 sequences, total weight= 1416 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1545 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h03P/info/1h03P.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h03P/nostruct-align/1h03P.t2k.a2m.gz, have 410755 columns in 1802 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vjpA/nostruct-align/1vjpA.t2k.a2m.gz
# 1vjpA.t2k.a2m with 159 sequences, total weight= 24.3509 avg weight= 0.153151 36 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vjpA/info/1vjpA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vjpA/nostruct-align/1vjpA.t2k.a2m.gz, have 411137 columns in 1803 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cyjA/nostruct-align/2cyjA.t2k.a2m.gz
# 2cyjA.t2k.a2m with 19 sequences, total weight= 9.3818 avg weight= 0.493779 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cyjA/info/2cyjA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cyjA/nostruct-align/2cyjA.t2k.a2m.gz, have 411255 columns in 1804 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vicA/nostruct-align/1vicA.t2k.a2m.gz
# 1vicA.t2k.a2m with 499 sequences, total weight= 499 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09327 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vicA/info/1vicA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vicA/nostruct-align/1vicA.t2k.a2m.gz, have 411510 columns in 1805 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tukA/nostruct-align/1tukA.t2k.a2m.gz
# 1tukA.t2k.a2m with 56 sequences, total weight= 7.22094 avg weight= 0.128945 32 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tukA/info/1tukA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tukA/nostruct-align/1tukA.t2k.a2m.gz, have 411577 columns in 1806 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3c/3chbD/nostruct-align/3chbD.t2k.a2m.gz
# 3chbD.t2k.a2m with 40 sequences, total weight= 2.43688 avg weight= 0.060922 11 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3c/3chbD/info/3chbD.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/3c/3chbD/nostruct-align/3chbD.t2k.a2m.gz, have 411680 columns in 1807 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2dskA/nostruct-align/2dskA.t2k.a2m.gz
# 2dskA.t2k.a2m with 174 sequences, total weight= 174 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15742 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2dskA/info/2dskA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2dskA/nostruct-align/2dskA.t2k.a2m.gz, have 411980 columns in 1808 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xteA/nostruct-align/1xteA.t2k.a2m.gz
# 1xteA.t2k.a2m with 625 sequences, total weight= 240.74 avg weight= 0.385184 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30478 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xteA/info/1xteA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xteA/nostruct-align/1xteA.t2k.a2m.gz, have 412096 columns in 1809 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1my7A/nostruct-align/1my7A.t2k.a2m.gz
# 1my7A.t2k.a2m with 186 sequences, total weight= 12.4867 avg weight= 0.0671329 31 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1my7A/info/1my7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1my7A/nostruct-align/1my7A.t2k.a2m.gz, have 412203 columns in 1810 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nbcA/nostruct-align/1nbcA.t2k.a2m.gz
# 1nbcA.t2k.a2m with 110 sequences, total weight= 32.057 avg weight= 0.291427 43 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nbcA/info/1nbcA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nbcA/nostruct-align/1nbcA.t2k.a2m.gz, have 412358 columns in 1811 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2anxA/nostruct-align/2anxA.t2k.a2m.gz
# 2anxA.t2k.a2m with 615 sequences, total weight= 80.7407 avg weight= 0.131286 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30113 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2anxA/info/2anxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2anxA/nostruct-align/2anxA.t2k.a2m.gz, have 412504 columns in 1812 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fp1A/nostruct-align/2fp1A.t2k.a2m.gz
# 2fp1A.t2k.a2m with 216 sequences, total weight= 92.9644 avg weight= 0.430391 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30031 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fp1A/info/2fp1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fp1A/nostruct-align/2fp1A.t2k.a2m.gz, have 412669 columns in 1813 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ek6A/nostruct-align/1ek6A.t2k.a2m.gz
# 1ek6A.t2k.a2m with 988 sequences, total weight= 988 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02589 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ek6A/info/1ek6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1ek6A/nostruct-align/1ek6A.t2k.a2m.gz, have 413015 columns in 1814 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t6t1/nostruct-align/1t6t1.t2k.a2m.gz
# 1t6t1.t2k.a2m with 142 sequences, total weight= 44.5975 avg weight= 0.314067 44 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t6t1/info/1t6t1.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1t6t1/nostruct-align/1t6t1.t2k.a2m.gz, have 413123 columns in 1815 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cvlA/nostruct-align/2cvlA.t2k.a2m.gz
# 2cvlA.t2k.a2m with 1040 sequences, total weight= 222.625 avg weight= 0.214062 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30935 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cvlA/info/2cvlA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cvlA/nostruct-align/2cvlA.t2k.a2m.gz, have 413247 columns in 1816 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hjeA/nostruct-align/2hjeA.t2k.a2m.gz
# 2hjeA.t2k.a2m with 21 sequences, total weight= 11.2424 avg weight= 0.535352 22 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hjeA/info/2hjeA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hjeA/nostruct-align/2hjeA.t2k.a2m.gz, have 413457 columns in 1817 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gz8A/nostruct-align/1gz8A.t2k.a2m.gz
# 1gz8A.t2k.a2m with 12611 sequences, total weight= 12611 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14322 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gz8A/info/1gz8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gz8A/nostruct-align/1gz8A.t2k.a2m.gz, have 413748 columns in 1818 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2e/2ev1A/nostruct-align/2ev1A.t2k.a2m.gz
# 2ev1A.t2k.a2m with 19 sequences, total weight= 7.25687 avg weight= 0.381941 18 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2e/2ev1A/info/2ev1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2e/2ev1A/nostruct-align/2ev1A.t2k.a2m.gz, have 413933 columns in 1819 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fjhA/nostruct-align/1fjhA.t2k.a2m.gz
# 1fjhA.t2k.a2m with 1650 sequences, total weight= 207.916 avg weight= 0.12601 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31564 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fjhA/info/1fjhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fjhA/nostruct-align/1fjhA.t2k.a2m.gz, have 414169 columns in 1820 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1evlA/nostruct-align/1evlA.t2k.a2m.gz
# 1evlA.t2k.a2m with 333 sequences, total weight= 333 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27221 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1evlA/info/1evlA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1evlA/nostruct-align/1evlA.t2k.a2m.gz, have 414570 columns in 1821 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hyoA/nostruct-align/1hyoA.t2k.a2m.gz
# 1hyoA.t2k.a2m with 224 sequences, total weight= 57.9931 avg weight= 0.258898 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hyoA/info/1hyoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hyoA/nostruct-align/1hyoA.t2k.a2m.gz, have 414986 columns in 1822 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sc3B/nostruct-align/1sc3B.t2k.a2m.gz
# 1sc3B.t2k.a2m with 196 sequences, total weight= 14.8167 avg weight= 0.0755956 36 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sc3B/info/1sc3B.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1sc3B/nostruct-align/1sc3B.t2k.a2m.gz, have 415074 columns in 1823 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pu6A/nostruct-align/1pu6A.t2k.a2m.gz
# 1pu6A.t2k.a2m with 284 sequences, total weight= 177.407 avg weight= 0.624671 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30132 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pu6A/info/1pu6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pu6A/nostruct-align/1pu6A.t2k.a2m.gz, have 415291 columns in 1824 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kqpA/nostruct-align/1kqpA.t2k.a2m.gz
# 1kqpA.t2k.a2m with 245 sequences, total weight= 91.4677 avg weight= 0.373337 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30128 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kqpA/info/1kqpA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kqpA/nostruct-align/1kqpA.t2k.a2m.gz, have 415562 columns in 1825 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vqqA/nostruct-align/1vqqA.t2k.a2m.gz
# 1vqqA.t2k.a2m with 1385 sequences, total weight= 1385 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26877 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vqqA/info/1vqqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vqqA/nostruct-align/1vqqA.t2k.a2m.gz, have 416197 columns in 1826 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2b2hA/nostruct-align/2b2hA.t2k.a2m.gz
# 2b2hA.t2k.a2m with 619 sequences, total weight= 41.1985 avg weight= 0.0665565 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2b2hA/info/2b2hA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2b2hA/nostruct-align/2b2hA.t2k.a2m.gz, have 416588 columns in 1827 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wn2A/nostruct-align/1wn2A.t2k.a2m.gz
# 1wn2A.t2k.a2m with 147 sequences, total weight= 22.7021 avg weight= 0.154436 38 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wn2A/info/1wn2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wn2A/nostruct-align/1wn2A.t2k.a2m.gz, have 416706 columns in 1828 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oh0A/nostruct-align/1oh0A.t2k.a2m.gz
# 1oh0A.t2k.a2m with 74 sequences, total weight= 74 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14741 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oh0A/info/1oh0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oh0A/nostruct-align/1oh0A.t2k.a2m.gz, have 416831 columns in 1829 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/4u/4ubpB/nostruct-align/4ubpB.t2k.a2m.gz
# 4ubpB.t2k.a2m with 181 sequences, total weight= 6.88797 avg weight= 0.0380551 32 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/4u/4ubpB/info/4ubpB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/4u/4ubpB/nostruct-align/4ubpB.t2k.a2m.gz, have 416953 columns in 1830 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t0tV/nostruct-align/1t0tV.t2k.a2m.gz
# 1t0tV.t2k.a2m with 42 sequences, total weight= 20.4941 avg weight= 0.487956 31 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t0tV/info/1t0tV.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1t0tV/nostruct-align/1t0tV.t2k.a2m.gz, have 417196 columns in 1831 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e6uA/nostruct-align/1e6uA.t2k.a2m.gz
# 1e6uA.t2k.a2m with 680 sequences, total weight= 680 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22708 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e6uA/info/1e6uA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1e6uA/nostruct-align/1e6uA.t2k.a2m.gz, have 417511 columns in 1832 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q5yA/nostruct-align/1q5yA.t2k.a2m.gz
# 1q5yA.t2k.a2m with 43 sequences, total weight= 13.323 avg weight= 0.309837 29 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q5yA/info/1q5yA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1q5yA/nostruct-align/1q5yA.t2k.a2m.gz, have 417595 columns in 1833 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fk5A/nostruct-align/1fk5A.t2k.a2m.gz
# 1fk5A.t2k.a2m with 273 sequences, total weight= 38.7572 avg weight= 0.141968 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fk5A/info/1fk5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fk5A/nostruct-align/1fk5A.t2k.a2m.gz, have 417688 columns in 1834 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cz2A/nostruct-align/2cz2A.t2k.a2m.gz
# 2cz2A.t2k.a2m with 2776 sequences, total weight= 2776 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08895 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cz2A/info/2cz2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cz2A/nostruct-align/2cz2A.t2k.a2m.gz, have 417900 columns in 1835 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a8d/nostruct-align/1a8d.t2k.a2m.gz
# 1a8d.t2k.a2m with 90 sequences, total weight= 19.8426 avg weight= 0.220473 29 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a8d/info/1a8d.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1a8d/nostruct-align/1a8d.t2k.a2m.gz, have 418352 columns in 1836 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pidA/nostruct-align/1pidA.t2k.a2m.gz
# 1pidA.t2k.a2m with 175 sequences, total weight= 2.40858 avg weight= 0.0137633 19 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pidA/info/1pidA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pidA/nostruct-align/1pidA.t2k.a2m.gz, have 418373 columns in 1837 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n0qA/nostruct-align/1n0qA.t2k.a2m.gz
# 1n0qA.t2k.a2m with 3807 sequences, total weight= 3575.78 avg weight= 0.939265 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30201 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n0qA/info/1n0qA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1n0qA/nostruct-align/1n0qA.t2k.a2m.gz, have 418464 columns in 1838 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2f69A/nostruct-align/2f69A.t2k.a2m.gz
# 2f69A.t2k.a2m with 325 sequences, total weight= 231.763 avg weight= 0.713118 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30064 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2f69A/info/2f69A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2f69A/nostruct-align/2f69A.t2k.a2m.gz, have 418708 columns in 1839 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2burA/nostruct-align/2burA.t2k.a2m.gz
# 2burA.t2k.a2m with 602 sequences, total weight= 89.7996 avg weight= 0.149169 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30269 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2burA/info/2burA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2burA/nostruct-align/2burA.t2k.a2m.gz, have 418910 columns in 1840 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h0hB/nostruct-align/1h0hB.t2k.a2m.gz
# 1h0hB.t2k.a2m with 404 sequences, total weight= 404 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27906 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h0hB/info/1h0hB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h0hB/nostruct-align/1h0hB.t2k.a2m.gz, have 419124 columns in 1841 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jm1A/nostruct-align/1jm1A.t2k.a2m.gz
# 1jm1A.t2k.a2m with 296 sequences, total weight= 120.734 avg weight= 0.407886 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jm1A/info/1jm1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jm1A/nostruct-align/1jm1A.t2k.a2m.gz, have 419326 columns in 1842 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gwgA/nostruct-align/2gwgA.t2k.a2m.gz
# 2gwgA.t2k.a2m with 297 sequences, total weight= 297 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06328 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gwgA/info/2gwgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gwgA/nostruct-align/2gwgA.t2k.a2m.gz, have 419655 columns in 1843 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fna/nostruct-align/1fna.t2k.a2m.gz
# 1fna.t2k.a2m with 2401 sequences, total weight= 2401 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13081 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fna/info/1fna.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fna/nostruct-align/1fna.t2k.a2m.gz, have 419746 columns in 1844 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fy7A/nostruct-align/2fy7A.t2k.a2m.gz
# 2fy7A.t2k.a2m with 381 sequences, total weight= 381 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25379 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fy7A/info/2fy7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fy7A/nostruct-align/2fy7A.t2k.a2m.gz, have 420014 columns in 1845 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2s/2sicI/nostruct-align/2sicI.t2k.a2m.gz
# 2sicI.t2k.a2m with 43 sequences, total weight= 9.25704 avg weight= 0.21528 27 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2s/2sicI/info/2sicI.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2s/2sicI/nostruct-align/2sicI.t2k.a2m.gz, have 420121 columns in 1846 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lniA/nostruct-align/1lniA.t2k.a2m.gz
# 1lniA.t2k.a2m with 33 sequences, total weight= 5.44893 avg weight= 0.165119 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lniA/info/1lniA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lniA/nostruct-align/1lniA.t2k.a2m.gz, have 420217 columns in 1847 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bryA/nostruct-align/2bryA.t2k.a2m.gz
# 2bryA.t2k.a2m with 2785 sequences, total weight= 2785 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.860125 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bryA/info/2bryA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bryA/nostruct-align/2bryA.t2k.a2m.gz, have 420696 columns in 1848 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zoiA/nostruct-align/1zoiA.t2k.a2m.gz
# 1zoiA.t2k.a2m with 3643 sequences, total weight= 3643 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.824514 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zoiA/info/1zoiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zoiA/nostruct-align/1zoiA.t2k.a2m.gz, have 420971 columns in 1849 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eu3A/nostruct-align/1eu3A.t2k.a2m.gz
# 1eu3A.t2k.a2m with 207 sequences, total weight= 49.255 avg weight= 0.237947 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eu3A/info/1eu3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1eu3A/nostruct-align/1eu3A.t2k.a2m.gz, have 421181 columns in 1850 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2c4nA/nostruct-align/2c4nA.t2k.a2m.gz
# 2c4nA.t2k.a2m with 1201 sequences, total weight= 1201 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.920079 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2c4nA/info/2c4nA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2c4nA/nostruct-align/2c4nA.t2k.a2m.gz, have 421431 columns in 1851 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t8kA/nostruct-align/1t8kA.t2k.a2m.gz
# 1t8kA.t2k.a2m with 686 sequences, total weight= 126.895 avg weight= 0.184978 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30359 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t8kA/info/1t8kA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1t8kA/nostruct-align/1t8kA.t2k.a2m.gz, have 421508 columns in 1852 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n40A/nostruct-align/1n40A.t2k.a2m.gz
# 1n40A.t2k.a2m with 1498 sequences, total weight= 1498 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11424 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n40A/info/1n40A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1n40A/nostruct-align/1n40A.t2k.a2m.gz, have 421902 columns in 1853 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rw7A/nostruct-align/1rw7A.t2k.a2m.gz
# 1rw7A.t2k.a2m with 158 sequences, total weight= 95.558 avg weight= 0.604797 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30052 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rw7A/info/1rw7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rw7A/nostruct-align/1rw7A.t2k.a2m.gz, have 422137 columns in 1854 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m7sA/nostruct-align/1m7sA.t2k.a2m.gz
# 1m7sA.t2k.a2m with 397 sequences, total weight= 29.3792 avg weight= 0.0740031 42 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m7sA/info/1m7sA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m7sA/nostruct-align/1m7sA.t2k.a2m.gz, have 422621 columns in 1855 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vp2A/nostruct-align/1vp2A.t2k.a2m.gz
# 1vp2A.t2k.a2m with 273 sequences, total weight= 25.3527 avg weight= 0.0928669 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vp2A/info/1vp2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vp2A/nostruct-align/1vp2A.t2k.a2m.gz, have 422810 columns in 1856 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e58A/nostruct-align/1e58A.t2k.a2m.gz
# 1e58A.t2k.a2m with 313 sequences, total weight= 313 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29281 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e58A/info/1e58A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1e58A/nostruct-align/1e58A.t2k.a2m.gz, have 423057 columns in 1857 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fmaA/nostruct-align/2fmaA.t2k.a2m.gz
# 2fmaA.t2k.a2m with 189 sequences, total weight= 5.12185 avg weight= 0.0270997 28 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fmaA/info/2fmaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fmaA/nostruct-align/2fmaA.t2k.a2m.gz, have 423116 columns in 1858 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2d5cA/nostruct-align/2d5cA.t2k.a2m.gz
# 2d5cA.t2k.a2m with 933 sequences, total weight= 90.4193 avg weight= 0.0969125 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30562 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2d5cA/info/2d5cA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2d5cA/nostruct-align/2d5cA.t2k.a2m.gz, have 423377 columns in 1859 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w3iA/nostruct-align/1w3iA.t2k.a2m.gz
# 1w3iA.t2k.a2m with 572 sequences, total weight= 174.959 avg weight= 0.305873 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30295 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w3iA/info/1w3iA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w3iA/nostruct-align/1w3iA.t2k.a2m.gz, have 423670 columns in 1860 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qczA/nostruct-align/1qczA.t2k.a2m.gz
# 1qczA.t2k.a2m with 236 sequences, total weight= 17.2972 avg weight= 0.0732933 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qczA/info/1qczA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qczA/nostruct-align/1qczA.t2k.a2m.gz, have 423832 columns in 1861 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kugA/nostruct-align/1kugA.t2k.a2m.gz
# 1kugA.t2k.a2m with 429 sequences, total weight= 157.637 avg weight= 0.367451 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30639 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kugA/info/1kugA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kugA/nostruct-align/1kugA.t2k.a2m.gz, have 424033 columns in 1862 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y2mA/nostruct-align/1y2mA.t2k.a2m.gz
# 1y2mA.t2k.a2m with 513 sequences, total weight= 42.3622 avg weight= 0.0825773 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y2mA/info/1y2mA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1y2mA/nostruct-align/1y2mA.t2k.a2m.gz, have 424698 columns in 1863 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gyqA/nostruct-align/2gyqA.t2k.a2m.gz
# 2gyqA.t2k.a2m with 164 sequences, total weight= 23.6269 avg weight= 0.144066 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gyqA/info/2gyqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gyqA/nostruct-align/2gyqA.t2k.a2m.gz, have 424860 columns in 1864 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v9tA/nostruct-align/1v9tA.t2k.a2m.gz
# 1v9tA.t2k.a2m with 1090 sequences, total weight= 49.895 avg weight= 0.0457752 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30036 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v9tA/info/1v9tA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v9tA/nostruct-align/1v9tA.t2k.a2m.gz, have 425026 columns in 1865 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vfyA/nostruct-align/1vfyA.t2k.a2m.gz
# 1vfyA.t2k.a2m with 347 sequences, total weight= 32.664 avg weight= 0.0941325 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vfyA/info/1vfyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vfyA/nostruct-align/1vfyA.t2k.a2m.gz, have 425093 columns in 1866 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cz1A/nostruct-align/2cz1A.t2k.a2m.gz
# 2cz1A.t2k.a2m with 77 sequences, total weight= 7.24188 avg weight= 0.0940504 24 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cz1A/info/2cz1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cz1A/nostruct-align/2cz1A.t2k.a2m.gz, have 425289 columns in 1867 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2d3dA/nostruct-align/2d3dA.t2k.a2m.gz
# 2d3dA.t2k.a2m with 79 sequences, total weight= 12.3547 avg weight= 0.156388 30 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2d3dA/info/2d3dA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2d3dA/nostruct-align/2d3dA.t2k.a2m.gz, have 425372 columns in 1868 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2co3A/nostruct-align/2co3A.t2k.a2m.gz
# 2co3A.t2k.a2m with 11 sequences, total weight= 4.49727 avg weight= 0.408843 15 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2co3A/info/2co3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2co3A/nostruct-align/2co3A.t2k.a2m.gz, have 425506 columns in 1869 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r12A/nostruct-align/1r12A.t2k.a2m.gz
# 1r12A.t2k.a2m with 22 sequences, total weight= 6.3607 avg weight= 0.289123 20 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r12A/info/1r12A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r12A/nostruct-align/1r12A.t2k.a2m.gz, have 425757 columns in 1870 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wm3A/nostruct-align/1wm3A.t2k.a2m.gz
# 1wm3A.t2k.a2m with 201 sequences, total weight= 31.7537 avg weight= 0.157979 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wm3A/info/1wm3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wm3A/nostruct-align/1wm3A.t2k.a2m.gz, have 425829 columns in 1871 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r3sA/nostruct-align/1r3sA.t2k.a2m.gz
# 1r3sA.t2k.a2m with 216 sequences, total weight= 69.0601 avg weight= 0.319723 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r3sA/info/1r3sA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r3sA/nostruct-align/1r3sA.t2k.a2m.gz, have 426185 columns in 1872 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nycA/nostruct-align/1nycA.t2k.a2m.gz
# 1nycA.t2k.a2m with 7 sequences, total weight= 2.41171 avg weight= 0.34453 8 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nycA/info/1nycA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nycA/nostruct-align/1nycA.t2k.a2m.gz, have 426296 columns in 1873 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1olrA/nostruct-align/1olrA.t2k.a2m.gz
# 1olrA.t2k.a2m with 62 sequences, total weight= 20.5165 avg weight= 0.330911 35 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1olrA/info/1olrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1olrA/nostruct-align/1olrA.t2k.a2m.gz, have 426520 columns in 1874 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dqgA/nostruct-align/1dqgA.t2k.a2m.gz
# 1dqgA.t2k.a2m with 45 sequences, total weight= 17.0159 avg weight= 0.378132 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dqgA/info/1dqgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dqgA/nostruct-align/1dqgA.t2k.a2m.gz, have 426654 columns in 1875 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2e/2e2oA/nostruct-align/2e2oA.t2k.a2m.gz
# 2e2oA.t2k.a2m with 453 sequences, total weight= 453 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14757 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2e/2e2oA/info/2e2oA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2e/2e2oA/nostruct-align/2e2oA.t2k.a2m.gz, have 426953 columns in 1876 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nqlA/nostruct-align/2nqlA.t2k.a2m.gz
# 2nqlA.t2k.a2m with 890 sequences, total weight= 707.062 avg weight= 0.794452 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30397 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nqlA/info/2nqlA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2n/2nqlA/nostruct-align/2nqlA.t2k.a2m.gz, have 427341 columns in 1877 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zzwA/nostruct-align/1zzwA.t2k.a2m.gz
# 1zzwA.t2k.a2m with 1847 sequences, total weight= 1847 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14483 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zzwA/info/1zzwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zzwA/nostruct-align/1zzwA.t2k.a2m.gz, have 427488 columns in 1878 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lwbA/nostruct-align/1lwbA.t2k.a2m.gz
# 1lwbA.t2k.a2m with 12 sequences, total weight= 6.59312 avg weight= 0.549427 15 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lwbA/info/1lwbA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lwbA/nostruct-align/1lwbA.t2k.a2m.gz, have 427610 columns in 1879 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gteA/nostruct-align/1gteA.t2k.a2m.gz
# 1gteA.t2k.a2m with 1169 sequences, total weight= 1169 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.993882 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gteA/info/1gteA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gteA/nostruct-align/1gteA.t2k.a2m.gz, have 428615 columns in 1880 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pq7A/nostruct-align/1pq7A.t2k.a2m.gz
# 1pq7A.t2k.a2m with 2861 sequences, total weight= 431.468 avg weight= 0.15081 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.33635 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pq7A/info/1pq7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pq7A/nostruct-align/1pq7A.t2k.a2m.gz, have 428839 columns in 1881 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gkmA/nostruct-align/2gkmA.t2k.a2m.gz
# 2gkmA.t2k.a2m with 197 sequences, total weight= 96.2893 avg weight= 0.488778 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30056 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gkmA/info/2gkmA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gkmA/nostruct-align/2gkmA.t2k.a2m.gz, have 428966 columns in 1882 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wu4A/nostruct-align/1wu4A.t2k.a2m.gz
# 1wu4A.t2k.a2m with 90 sequences, total weight= 54.8846 avg weight= 0.609829 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wu4A/info/1wu4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wu4A/nostruct-align/1wu4A.t2k.a2m.gz, have 429340 columns in 1883 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lam/nostruct-align/1lam.t2k.a2m.gz
# 1lam.t2k.a2m with 258 sequences, total weight= 43.5448 avg weight= 0.168778 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30042 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lam/info/1lam.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lam/nostruct-align/1lam.t2k.a2m.gz, have 429824 columns in 1884 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xiyA/nostruct-align/1xiyA.t2k.a2m.gz
# 1xiyA.t2k.a2m with 435 sequences, total weight= 64.0851 avg weight= 0.147322 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30074 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xiyA/info/1xiyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xiyA/nostruct-align/1xiyA.t2k.a2m.gz, have 429996 columns in 1885 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2igpA/nostruct-align/2igpA.t2k.a2m.gz
# 2igpA.t2k.a2m with 72 sequences, total weight= 26.6626 avg weight= 0.370314 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2igpA/info/2igpA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2igpA/nostruct-align/2igpA.t2k.a2m.gz, have 430110 columns in 1886 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hoxA/nostruct-align/2hoxA.t2k.a2m.gz
# 2hoxA.t2k.a2m with 284 sequences, total weight= 284 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27791 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hoxA/info/2hoxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hoxA/nostruct-align/2hoxA.t2k.a2m.gz, have 430535 columns in 1887 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2c0gA/nostruct-align/2c0gA.t2k.a2m.gz
# 2c0gA.t2k.a2m with 98 sequences, total weight= 51.3196 avg weight= 0.52367 41 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2c0gA/info/2c0gA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2c0gA/nostruct-align/2c0gA.t2k.a2m.gz, have 430763 columns in 1888 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nar/nostruct-align/1nar.t2k.a2m.gz
# 1nar.t2k.a2m with 296 sequences, total weight= 93.7818 avg weight= 0.31683 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30088 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nar/info/1nar.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nar/nostruct-align/1nar.t2k.a2m.gz, have 431052 columns in 1889 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bs2C/nostruct-align/2bs2C.t2k.a2m.gz
# 2bs2C.t2k.a2m with 89 sequences, total weight= 31.0288 avg weight= 0.348638 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bs2C/info/2bs2C.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bs2C/nostruct-align/2bs2C.t2k.a2m.gz, have 431306 columns in 1890 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mof/nostruct-align/1mof.t2k.a2m.gz
# 1mof.t2k.a2m with 415 sequences, total weight= 5.48127 avg weight= 0.0132079 23 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mof/info/1mof.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mof/nostruct-align/1mof.t2k.a2m.gz, have 431359 columns in 1891 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kyfA/nostruct-align/1kyfA.t2k.a2m.gz
# 1kyfA.t2k.a2m with 37 sequences, total weight= 14.2791 avg weight= 0.38592 26 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kyfA/info/1kyfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kyfA/nostruct-align/1kyfA.t2k.a2m.gz, have 431606 columns in 1892 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xrkA/nostruct-align/1xrkA.t2k.a2m.gz
# 1xrkA.t2k.a2m with 155 sequences, total weight= 155 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15002 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xrkA/info/1xrkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xrkA/nostruct-align/1xrkA.t2k.a2m.gz, have 431726 columns in 1893 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2iruA/nostruct-align/2iruA.t2k.a2m.gz
# 2iruA.t2k.a2m with 217 sequences, total weight= 21.8065 avg weight= 0.100491 43 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2iruA/info/2iruA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2iruA/nostruct-align/2iruA.t2k.a2m.gz, have 432012 columns in 1894 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2f23A/nostruct-align/2f23A.t2k.a2m.gz
# 2f23A.t2k.a2m with 744 sequences, total weight= 61.483 avg weight= 0.0826385 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30041 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2f23A/info/2f23A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2f23A/nostruct-align/2f23A.t2k.a2m.gz, have 432166 columns in 1895 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3h/3htsB/nostruct-align/3htsB.t2k.a2m.gz
# 3htsB.t2k.a2m with 166 sequences, total weight= 16.4566 avg weight= 0.0991362 35 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3h/3htsB/info/3htsB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/3h/3htsB/nostruct-align/3htsB.t2k.a2m.gz, have 432248 columns in 1896 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lfpA/nostruct-align/1lfpA.t2k.a2m.gz
# 1lfpA.t2k.a2m with 187 sequences, total weight= 17.5074 avg weight= 0.0936224 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lfpA/info/1lfpA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lfpA/nostruct-align/1lfpA.t2k.a2m.gz, have 432491 columns in 1897 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x3xA/nostruct-align/1x3xA.t2k.a2m.gz
# 1x3xA.t2k.a2m with 948 sequences, total weight= 53.206 avg weight= 0.0561245 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x3xA/info/1x3xA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1x3xA/nostruct-align/1x3xA.t2k.a2m.gz, have 432573 columns in 1898 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mjuL/nostruct-align/1mjuL.t2k.a2m.gz
# 1mjuL.t2k.a2m with 21023 sequences, total weight= 395.636 avg weight= 0.0188192 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.37318 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mjuL/info/1mjuL.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mjuL/nostruct-align/1mjuL.t2k.a2m.gz, have 432792 columns in 1899 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bs2B/nostruct-align/2bs2B.t2k.a2m.gz
# 2bs2B.t2k.a2m with 888 sequences, total weight= 121.556 avg weight= 0.136888 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30306 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bs2B/info/2bs2B.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bs2B/nostruct-align/2bs2B.t2k.a2m.gz, have 433031 columns in 1900 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hnjA/nostruct-align/1hnjA.t2k.a2m.gz
# 1hnjA.t2k.a2m with 614 sequences, total weight= 614 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25011 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hnjA/info/1hnjA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hnjA/nostruct-align/1hnjA.t2k.a2m.gz, have 433348 columns in 1901 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jfbA/nostruct-align/1jfbA.t2k.a2m.gz
# 1jfbA.t2k.a2m with 1633 sequences, total weight= 1633 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11778 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jfbA/info/1jfbA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jfbA/nostruct-align/1jfbA.t2k.a2m.gz, have 433747 columns in 1902 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qq5A/nostruct-align/1qq5A.t2k.a2m.gz
# 1qq5A.t2k.a2m with 336 sequences, total weight= 336 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04072 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qq5A/info/1qq5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qq5A/nostruct-align/1qq5A.t2k.a2m.gz, have 433992 columns in 1903 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fd5A/nostruct-align/2fd5A.t2k.a2m.gz
# 2fd5A.t2k.a2m with 2639 sequences, total weight= 2639 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.875506 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fd5A/info/2fd5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fd5A/nostruct-align/2fd5A.t2k.a2m.gz, have 434172 columns in 1904 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f8eA/nostruct-align/1f8eA.t2k.a2m.gz
# 1f8eA.t2k.a2m with 366 sequences, total weight= 5.27025 avg weight= 0.0143996 24 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f8eA/info/1f8eA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1f8eA/nostruct-align/1f8eA.t2k.a2m.gz, have 434560 columns in 1905 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f9zA/nostruct-align/1f9zA.t2k.a2m.gz
# 1f9zA.t2k.a2m with 371 sequences, total weight= 371 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.998604 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f9zA/info/1f9zA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1f9zA/nostruct-align/1f9zA.t2k.a2m.gz, have 434688 columns in 1906 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1si6X/nostruct-align/1si6X.t2k.a2m.gz
# 1si6X.t2k.a2m with 349 sequences, total weight= 58.6347 avg weight= 0.168008 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30169 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1si6X/info/1si6X.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1si6X/nostruct-align/1si6X.t2k.a2m.gz, have 434968 columns in 1907 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uoyA/nostruct-align/1uoyA.t2k.a2m.gz
# 1uoyA.t2k.a2m with 5 sequences, total weight= 2.27278 avg weight= 0.454557 10 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uoyA/info/1uoyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uoyA/nostruct-align/1uoyA.t2k.a2m.gz, have 435032 columns in 1908 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hnxA/nostruct-align/2hnxA.t2k.a2m.gz
# 2hnxA.t2k.a2m with 542 sequences, total weight= 46.7076 avg weight= 0.0861764 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hnxA/info/2hnxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hnxA/nostruct-align/2hnxA.t2k.a2m.gz, have 435168 columns in 1909 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t9hA/nostruct-align/1t9hA.t2k.a2m.gz
# 1t9hA.t2k.a2m with 318 sequences, total weight= 92.6002 avg weight= 0.291196 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3014 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t9hA/info/1t9hA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1t9hA/nostruct-align/1t9hA.t2k.a2m.gz, have 435455 columns in 1910 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2ccyA/nostruct-align/2ccyA.t2k.a2m.gz
# 2ccyA.t2k.a2m with 56 sequences, total weight= 23.732 avg weight= 0.423785 36 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2ccyA/info/2ccyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2ccyA/nostruct-align/2ccyA.t2k.a2m.gz, have 435582 columns in 1911 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rkiA/nostruct-align/1rkiA.t2k.a2m.gz
# 1rkiA.t2k.a2m with 6 sequences, total weight= 2.78235 avg weight= 0.463724 12 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rkiA/info/1rkiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rkiA/nostruct-align/1rkiA.t2k.a2m.gz, have 435683 columns in 1912 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vkfA/nostruct-align/1vkfA.t2k.a2m.gz
# 1vkfA.t2k.a2m with 35 sequences, total weight= 8.88437 avg weight= 0.253839 29 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vkfA/info/1vkfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vkfA/nostruct-align/1vkfA.t2k.a2m.gz, have 435855 columns in 1913 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v4vA/nostruct-align/1v4vA.t2k.a2m.gz
# 1v4vA.t2k.a2m with 209 sequences, total weight= 60.4625 avg weight= 0.289294 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v4vA/info/1v4vA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v4vA/nostruct-align/1v4vA.t2k.a2m.gz, have 436228 columns in 1914 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wy2A/nostruct-align/1wy2A.t2k.a2m.gz
# 1wy2A.t2k.a2m with 1283 sequences, total weight= 1283 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15388 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wy2A/info/1wy2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wy2A/nostruct-align/1wy2A.t2k.a2m.gz, have 436579 columns in 1915 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wd3A/nostruct-align/1wd3A.t2k.a2m.gz
# 1wd3A.t2k.a2m with 27 sequences, total weight= 6.25764 avg weight= 0.231764 16 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wd3A/info/1wd3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wd3A/nostruct-align/1wd3A.t2k.a2m.gz, have 437061 columns in 1916 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iuaA/nostruct-align/1iuaA.t2k.a2m.gz
# 1iuaA.t2k.a2m with 29 sequences, total weight= 7.49961 avg weight= 0.258607 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iuaA/info/1iuaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1iuaA/nostruct-align/1iuaA.t2k.a2m.gz, have 437144 columns in 1917 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2j43A/nostruct-align/2j43A.t2k.a2m.gz
# 2j43A.t2k.a2m with 52 sequences, total weight= 26.8326 avg weight= 0.516012 29 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2j43A/info/2j43A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2j43A/nostruct-align/2j43A.t2k.a2m.gz, have 437363 columns in 1918 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r7aA/nostruct-align/1r7aA.t2k.a2m.gz
# 1r7aA.t2k.a2m with 420 sequences, total weight= 420 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28771 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r7aA/info/1r7aA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r7aA/nostruct-align/1r7aA.t2k.a2m.gz, have 437867 columns in 1919 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lqtA/nostruct-align/1lqtA.t2k.a2m.gz
# 1lqtA.t2k.a2m with 412 sequences, total weight= 412 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20478 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lqtA/info/1lqtA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lqtA/nostruct-align/1lqtA.t2k.a2m.gz, have 438319 columns in 1920 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2ba2A/nostruct-align/2ba2A.t2k.a2m.gz
# 2ba2A.t2k.a2m with 25 sequences, total weight= 6.55971 avg weight= 0.262388 18 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2ba2A/info/2ba2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2ba2A/nostruct-align/2ba2A.t2k.a2m.gz, have 438400 columns in 1921 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t6gC/nostruct-align/1t6gC.t2k.a2m.gz
# 1t6gC.t2k.a2m with 216 sequences, total weight= 10.9971 avg weight= 0.0509123 31 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t6gC/info/1t6gC.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1t6gC/nostruct-align/1t6gC.t2k.a2m.gz, have 438582 columns in 1922 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qsgA/nostruct-align/1qsgA.t2k.a2m.gz
# 1qsgA.t2k.a2m with 1213 sequences, total weight= 289.266 avg weight= 0.238471 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31535 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qsgA/info/1qsgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qsgA/nostruct-align/1qsgA.t2k.a2m.gz, have 438840 columns in 1923 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2imjA/nostruct-align/2imjA.t2k.a2m.gz
# 2imjA.t2k.a2m with 125 sequences, total weight= 5.34876 avg weight= 0.0427901 22 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2imjA/info/2imjA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2imjA/nostruct-align/2imjA.t2k.a2m.gz, have 438998 columns in 1924 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bfxC/nostruct-align/2bfxC.t2k.a2m.gz
# 2bfxC.t2k.a2m with 12 sequences, total weight= 2.96275 avg weight= 0.246896 15 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bfxC/info/2bfxC.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bfxC/nostruct-align/2bfxC.t2k.a2m.gz, have 439038 columns in 1925 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2guyA/nostruct-align/2guyA.t2k.a2m.gz
# 2guyA.t2k.a2m with 3857 sequences, total weight= 3857 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.982651 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2guyA/info/2guyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2guyA/nostruct-align/2guyA.t2k.a2m.gz, have 439514 columns in 1926 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jyhA/nostruct-align/1jyhA.t2k.a2m.gz
# 1jyhA.t2k.a2m with 57 sequences, total weight= 52.7878 avg weight= 0.926102 38 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jyhA/info/1jyhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jyhA/nostruct-align/1jyhA.t2k.a2m.gz, have 439669 columns in 1927 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cxyA/nostruct-align/1cxyA.t2k.a2m.gz
# 1cxyA.t2k.a2m with 426 sequences, total weight= 45.9121 avg weight= 0.107775 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30041 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cxyA/info/1cxyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1cxyA/nostruct-align/1cxyA.t2k.a2m.gz, have 439750 columns in 1928 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cb9A/nostruct-align/2cb9A.t2k.a2m.gz
# 2cb9A.t2k.a2m with 991 sequences, total weight= 991 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04174 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cb9A/info/2cb9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cb9A/nostruct-align/2cb9A.t2k.a2m.gz, have 439962 columns in 1929 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lbvA/nostruct-align/1lbvA.t2k.a2m.gz
# 1lbvA.t2k.a2m with 516 sequences, total weight= 516 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24221 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lbvA/info/1lbvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lbvA/nostruct-align/1lbvA.t2k.a2m.gz, have 440214 columns in 1930 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1luzA/nostruct-align/1luzA.t2k.a2m.gz
# 1luzA.t2k.a2m with 246 sequences, total weight= 41.4628 avg weight= 0.168548 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1luzA/info/1luzA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1luzA/nostruct-align/1luzA.t2k.a2m.gz, have 440299 columns in 1931 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hx5A/nostruct-align/2hx5A.t2k.a2m.gz
# 2hx5A.t2k.a2m with 253 sequences, total weight= 253 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28787 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hx5A/info/2hx5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hx5A/nostruct-align/2hx5A.t2k.a2m.gz, have 440443 columns in 1932 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hlrA/nostruct-align/2hlrA.t2k.a2m.gz
# 2hlrA.t2k.a2m with 74 sequences, total weight= 6.87448 avg weight= 0.0928984 14 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hlrA/info/2hlrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hlrA/nostruct-align/2hlrA.t2k.a2m.gz, have 440510 columns in 1933 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2dy0A/nostruct-align/2dy0A.t2k.a2m.gz
# 2dy0A.t2k.a2m with 2317 sequences, total weight= 2317 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21167 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2dy0A/info/2dy0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2dy0A/nostruct-align/2dy0A.t2k.a2m.gz, have 440692 columns in 1934 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2o1rA/nostruct-align/2o1rA.t2k.a2m.gz
# 2o1rA.t2k.a2m with 839 sequences, total weight= 64.4965 avg weight= 0.076873 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30294 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2o1rA/info/2o1rA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2o1rA/nostruct-align/2o1rA.t2k.a2m.gz, have 440773 columns in 1935 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1snnA/nostruct-align/1snnA.t2k.a2m.gz
# 1snnA.t2k.a2m with 282 sequences, total weight= 14.1226 avg weight= 0.0500802 38 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1snnA/info/1snnA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1snnA/nostruct-align/1snnA.t2k.a2m.gz, have 440992 columns in 1936 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iqzA/nostruct-align/1iqzA.t2k.a2m.gz
# 1iqzA.t2k.a2m with 442 sequences, total weight= 442 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29189 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iqzA/info/1iqzA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1iqzA/nostruct-align/1iqzA.t2k.a2m.gz, have 441073 columns in 1937 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d7pM/nostruct-align/1d7pM.t2k.a2m.gz
# 1d7pM.t2k.a2m with 350 sequences, total weight= 42.3611 avg weight= 0.121032 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d7pM/info/1d7pM.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1d7pM/nostruct-align/1d7pM.t2k.a2m.gz, have 441232 columns in 1938 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hdkA/nostruct-align/1hdkA.t2k.a2m.gz
# 1hdkA.t2k.a2m with 357 sequences, total weight= 90.0178 avg weight= 0.252151 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30128 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hdkA/info/1hdkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hdkA/nostruct-align/1hdkA.t2k.a2m.gz, have 441371 columns in 1939 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2e/2ex4A/nostruct-align/2ex4A.t2k.a2m.gz
# 2ex4A.t2k.a2m with 738 sequences, total weight= 738 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.979132 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2e/2ex4A/info/2ex4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2e/2ex4A/nostruct-align/2ex4A.t2k.a2m.gz, have 441592 columns in 1940 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zb9A/nostruct-align/1zb9A.t2k.a2m.gz
# 1zb9A.t2k.a2m with 376 sequences, total weight= 87.0518 avg weight= 0.231521 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30089 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zb9A/info/1zb9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zb9A/nostruct-align/1zb9A.t2k.a2m.gz, have 441734 columns in 1941 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x9dA/nostruct-align/1x9dA.t2k.a2m.gz
# 1x9dA.t2k.a2m with 238 sequences, total weight= 29.2562 avg weight= 0.122925 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x9dA/info/1x9dA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1x9dA/nostruct-align/1x9dA.t2k.a2m.gz, have 442185 columns in 1942 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2a5lA/nostruct-align/2a5lA.t2k.a2m.gz
# 2a5lA.t2k.a2m with 367 sequences, total weight= 349.932 avg weight= 0.953493 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30054 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2a5lA/info/2a5lA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2a5lA/nostruct-align/2a5lA.t2k.a2m.gz, have 442356 columns in 1943 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2c5qA/nostruct-align/2c5qA.t2k.a2m.gz
# 2c5qA.t2k.a2m with 217 sequences, total weight= 131.164 avg weight= 0.604441 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30078 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2c5qA/info/2c5qA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2c5qA/nostruct-align/2c5qA.t2k.a2m.gz, have 442588 columns in 1944 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fe3A/nostruct-align/2fe3A.t2k.a2m.gz
# 2fe3A.t2k.a2m with 1153 sequences, total weight= 207.269 avg weight= 0.179765 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31047 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fe3A/info/2fe3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fe3A/nostruct-align/2fe3A.t2k.a2m.gz, have 442729 columns in 1945 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dp7P/nostruct-align/1dp7P.t2k.a2m.gz
# 1dp7P.t2k.a2m with 59 sequences, total weight= 6.35566 avg weight= 0.107723 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dp7P/info/1dp7P.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dp7P/nostruct-align/1dp7P.t2k.a2m.gz, have 442805 columns in 1946 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yocA/nostruct-align/1yocA.t2k.a2m.gz
# 1yocA.t2k.a2m with 95 sequences, total weight= 95 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28744 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yocA/info/1yocA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yocA/nostruct-align/1yocA.t2k.a2m.gz, have 442950 columns in 1947 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gp6A/nostruct-align/1gp6A.t2k.a2m.gz
# 1gp6A.t2k.a2m with 561 sequences, total weight= 213.359 avg weight= 0.380319 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30635 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gp6A/info/1gp6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gp6A/nostruct-align/1gp6A.t2k.a2m.gz, have 443299 columns in 1948 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2g8cO/nostruct-align/2g8cO.t2k.a2m.gz
# 2g8cO.t2k.a2m with 334 sequences, total weight= 6.019 avg weight= 0.018021 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2g8cO/info/2g8cO.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2g8cO/nostruct-align/2g8cO.t2k.a2m.gz, have 443545 columns in 1949 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zhvA/nostruct-align/1zhvA.t2k.a2m.gz
# 1zhvA.t2k.a2m with 90 sequences, total weight= 44.4842 avg weight= 0.494269 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zhvA/info/1zhvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zhvA/nostruct-align/1zhvA.t2k.a2m.gz, have 443679 columns in 1950 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rz2A/nostruct-align/1rz2A.t2k.a2m.gz
# 1rz2A.t2k.a2m with 52 sequences, total weight= 23.9383 avg weight= 0.460352 30 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rz2A/info/1rz2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rz2A/nostruct-align/1rz2A.t2k.a2m.gz, have 443893 columns in 1951 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uwwA/nostruct-align/1uwwA.t2k.a2m.gz
# 1uwwA.t2k.a2m with 12 sequences, total weight= 2.8683 avg weight= 0.239025 13 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uwwA/info/1uwwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uwwA/nostruct-align/1uwwA.t2k.a2m.gz, have 444077 columns in 1952 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x46A/nostruct-align/1x46A.t2k.a2m.gz
# 1x46A.t2k.a2m with 743 sequences, total weight= 743 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27402 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x46A/info/1x46A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1x46A/nostruct-align/1x46A.t2k.a2m.gz, have 444227 columns in 1953 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2ic7A/nostruct-align/2ic7A.t2k.a2m.gz
# 2ic7A.t2k.a2m with 4822 sequences, total weight= 4822 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15922 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2ic7A/info/2ic7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2ic7A/nostruct-align/2ic7A.t2k.a2m.gz, have 444412 columns in 1954 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2ob0A/nostruct-align/2ob0A.t2k.a2m.gz
# 2ob0A.t2k.a2m with 2864 sequences, total weight= 2864 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.964425 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2ob0A/info/2ob0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2ob0A/nostruct-align/2ob0A.t2k.a2m.gz, have 444566 columns in 1955 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2amjA/nostruct-align/2amjA.t2k.a2m.gz
# 2amjA.t2k.a2m with 485 sequences, total weight= 485 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25834 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2amjA/info/2amjA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2amjA/nostruct-align/2amjA.t2k.a2m.gz, have 444746 columns in 1956 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fsxA/nostruct-align/2fsxA.t2k.a2m.gz
# 2fsxA.t2k.a2m with 790 sequences, total weight= 790 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29752 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fsxA/info/2fsxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fsxA/nostruct-align/2fsxA.t2k.a2m.gz, have 444878 columns in 1957 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h75A/nostruct-align/1h75A.t2k.a2m.gz
# 1h75A.t2k.a2m with 262 sequences, total weight= 105.582 avg weight= 0.402986 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30053 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h75A/info/1h75A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h75A/nostruct-align/1h75A.t2k.a2m.gz, have 444954 columns in 1958 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xp2A/nostruct-align/1xp2A.t2k.a2m.gz
# 1xp2A.t2k.a2m with 277 sequences, total weight= 277 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13553 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xp2A/info/1xp2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xp2A/nostruct-align/1xp2A.t2k.a2m.gz, have 445103 columns in 1959 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cs1A/nostruct-align/1cs1A.t2k.a2m.gz
# 1cs1A.t2k.a2m with 531 sequences, total weight= 531 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15768 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cs1A/info/1cs1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1cs1A/nostruct-align/1cs1A.t2k.a2m.gz, have 445487 columns in 1960 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n08A/nostruct-align/1n08A.t2k.a2m.gz
# 1n08A.t2k.a2m with 130 sequences, total weight= 23.9763 avg weight= 0.184433 42 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n08A/info/1n08A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1n08A/nostruct-align/1n08A.t2k.a2m.gz, have 445641 columns in 1961 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2c2qA/nostruct-align/2c2qA.t2k.a2m.gz
# 2c2qA.t2k.a2m with 113 sequences, total weight= 46.3306 avg weight= 0.410005 45 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2c2qA/info/2c2qA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2c2qA/nostruct-align/2c2qA.t2k.a2m.gz, have 445824 columns in 1962 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2ff7A/nostruct-align/2ff7A.t2k.a2m.gz
# 2ff7A.t2k.a2m with 22672 sequences, total weight= 1158.92 avg weight= 0.0511167 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.38778 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2ff7A/info/2ff7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2ff7A/nostruct-align/2ff7A.t2k.a2m.gz, have 446067 columns in 1963 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n13B/nostruct-align/1n13B.t2k.a2m.gz
# 1n13B.t2k.a2m with 21 sequences, total weight= 8.65496 avg weight= 0.412141 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n13B/info/1n13B.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1n13B/nostruct-align/1n13B.t2k.a2m.gz, have 446179 columns in 1964 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2oztA/nostruct-align/2oztA.t2k.a2m.gz
# 2oztA.t2k.a2m with 565 sequences, total weight= 565 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22982 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2oztA/info/2oztA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2oztA/nostruct-align/2oztA.t2k.a2m.gz, have 446500 columns in 1965 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uwcA/nostruct-align/1uwcA.t2k.a2m.gz
# 1uwcA.t2k.a2m with 281 sequences, total weight= 281 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0799 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uwcA/info/1uwcA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uwcA/nostruct-align/1uwcA.t2k.a2m.gz, have 446761 columns in 1966 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bz1A/nostruct-align/2bz1A.t2k.a2m.gz
# 2bz1A.t2k.a2m with 464 sequences, total weight= 38.2055 avg weight= 0.0823394 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bz1A/info/2bz1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bz1A/nostruct-align/2bz1A.t2k.a2m.gz, have 446934 columns in 1967 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ooeA/nostruct-align/1ooeA.t2k.a2m.gz
# 1ooeA.t2k.a2m with 1009 sequences, total weight= 749.012 avg weight= 0.742331 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30565 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ooeA/info/1ooeA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1ooeA/nostruct-align/1ooeA.t2k.a2m.gz, have 447169 columns in 1968 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o7jA/nostruct-align/1o7jA.t2k.a2m.gz
# 1o7jA.t2k.a2m with 184 sequences, total weight= 53.0047 avg weight= 0.288069 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30046 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o7jA/info/1o7jA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1o7jA/nostruct-align/1o7jA.t2k.a2m.gz, have 447494 columns in 1969 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rzhL/nostruct-align/1rzhL.t2k.a2m.gz
# 1rzhL.t2k.a2m with 826 sequences, total weight= 15.6333 avg weight= 0.0189265 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rzhL/info/1rzhL.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rzhL/nostruct-align/1rzhL.t2k.a2m.gz, have 447775 columns in 1970 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vf8A/nostruct-align/1vf8A.t2k.a2m.gz
# 1vf8A.t2k.a2m with 1090 sequences, total weight= 1090 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28398 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vf8A/info/1vf8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vf8A/nostruct-align/1vf8A.t2k.a2m.gz, have 448148 columns in 1971 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cioA/nostruct-align/2cioA.t2k.a2m.gz
# 2cioA.t2k.a2m with 2296 sequences, total weight= 421.982 avg weight= 0.18379 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32273 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cioA/info/2cioA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cioA/nostruct-align/2cioA.t2k.a2m.gz, have 448360 columns in 1972 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sg4A/nostruct-align/1sg4A.t2k.a2m.gz
# 1sg4A.t2k.a2m with 1833 sequences, total weight= 1313.19 avg weight= 0.716416 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30903 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sg4A/info/1sg4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1sg4A/nostruct-align/1sg4A.t2k.a2m.gz, have 448609 columns in 1973 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2dpxA/nostruct-align/2dpxA.t2k.a2m.gz
# 2dpxA.t2k.a2m with 6289 sequences, total weight= 1745.07 avg weight= 0.277479 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.33874 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2dpxA/info/2dpxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2dpxA/nostruct-align/2dpxA.t2k.a2m.gz, have 448755 columns in 1974 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e0cA/nostruct-align/1e0cA.t2k.a2m.gz
# 1e0cA.t2k.a2m with 379 sequences, total weight= 379 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28763 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e0cA/info/1e0cA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1e0cA/nostruct-align/1e0cA.t2k.a2m.gz, have 449026 columns in 1975 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1usgA/nostruct-align/1usgA.t2k.a2m.gz
# 1usgA.t2k.a2m with 603 sequences, total weight= 603 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07428 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1usgA/info/1usgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1usgA/nostruct-align/1usgA.t2k.a2m.gz, have 449371 columns in 1976 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2f2bA/nostruct-align/2f2bA.t2k.a2m.gz
# 2f2bA.t2k.a2m with 1488 sequences, total weight= 152.24 avg weight= 0.102312 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31105 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2f2bA/info/2f2bA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2f2bA/nostruct-align/2f2bA.t2k.a2m.gz, have 449616 columns in 1977 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zhsA/nostruct-align/1zhsA.t2k.a2m.gz
# 1zhsA.t2k.a2m with 7 sequences, total weight= 4.54813 avg weight= 0.649732 12 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zhsA/info/1zhsA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zhsA/nostruct-align/1zhsA.t2k.a2m.gz, have 449729 columns in 1978 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1agjA/nostruct-align/1agjA.t2k.a2m.gz
# 1agjA.t2k.a2m with 515 sequences, total weight= 515 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18639 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1agjA/info/1agjA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1agjA/nostruct-align/1agjA.t2k.a2m.gz, have 449971 columns in 1979 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1se8A/nostruct-align/1se8A.t2k.a2m.gz
# 1se8A.t2k.a2m with 458 sequences, total weight= 55.6955 avg weight= 0.121606 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1se8A/info/1se8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1se8A/nostruct-align/1se8A.t2k.a2m.gz, have 450184 columns in 1980 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wxcA/nostruct-align/1wxcA.t2k.a2m.gz
# 1wxcA.t2k.a2m with 785 sequences, total weight= 785 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11703 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wxcA/info/1wxcA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wxcA/nostruct-align/1wxcA.t2k.a2m.gz, have 450457 columns in 1981 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2iwnA/nostruct-align/2iwnA.t2k.a2m.gz
# 2iwnA.t2k.a2m with 4388 sequences, total weight= 182.099 avg weight= 0.0414992 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31564 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2iwnA/info/2iwnA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2iwnA/nostruct-align/2iwnA.t2k.a2m.gz, have 450550 columns in 1982 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2apjA/nostruct-align/2apjA.t2k.a2m.gz
# 2apjA.t2k.a2m with 95 sequences, total weight= 63.5305 avg weight= 0.668742 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2apjA/info/2apjA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2apjA/nostruct-align/2apjA.t2k.a2m.gz, have 450794 columns in 1983 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pot/nostruct-align/1pot.t2k.a2m.gz
# 1pot.t2k.a2m with 562 sequences, total weight= 562 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02658 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pot/info/1pot.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pot/nostruct-align/1pot.t2k.a2m.gz, have 451116 columns in 1984 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vie/nostruct-align/1vie.t2k.a2m.gz
# 1vie.t2k.a2m with 9 sequences, total weight= 1.86527 avg weight= 0.207252 9 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vie/info/1vie.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vie/nostruct-align/1vie.t2k.a2m.gz, have 451176 columns in 1985 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dk0A/nostruct-align/1dk0A.t2k.a2m.gz
# 1dk0A.t2k.a2m with 30 sequences, total weight= 14.0474 avg weight= 0.468246 26 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dk0A/info/1dk0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dk0A/nostruct-align/1dk0A.t2k.a2m.gz, have 451349 columns in 1986 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2j1vA/nostruct-align/2j1vA.t2k.a2m.gz
# 2j1vA.t2k.a2m with 130 sequences, total weight= 106.66 avg weight= 0.820464 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2j1vA/info/2j1vA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2j1vA/nostruct-align/2j1vA.t2k.a2m.gz, have 451490 columns in 1987 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2genA/nostruct-align/2genA.t2k.a2m.gz
# 2genA.t2k.a2m with 4186 sequences, total weight= 4186 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.849271 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2genA/info/2genA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2genA/nostruct-align/2genA.t2k.a2m.gz, have 451678 columns in 1988 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mvfD/nostruct-align/1mvfD.t2k.a2m.gz
# 1mvfD.t2k.a2m with 13 sequences, total weight= 4.43739 avg weight= 0.341337 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mvfD/info/1mvfD.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mvfD/nostruct-align/1mvfD.t2k.a2m.gz, have 451722 columns in 1989 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zeqX/nostruct-align/1zeqX.t2k.a2m.gz
# 1zeqX.t2k.a2m with 90 sequences, total weight= 30.9686 avg weight= 0.344096 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zeqX/info/1zeqX.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zeqX/nostruct-align/1zeqX.t2k.a2m.gz, have 451806 columns in 1990 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1elwA/nostruct-align/1elwA.t2k.a2m.gz
# 1elwA.t2k.a2m with 1120 sequences, total weight= 1120 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10537 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1elwA/info/1elwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1elwA/nostruct-align/1elwA.t2k.a2m.gz, have 451923 columns in 1991 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oznA/nostruct-align/1oznA.t2k.a2m.gz
# 1oznA.t2k.a2m with 3264 sequences, total weight= 3264 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07634 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oznA/info/1oznA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oznA/nostruct-align/1oznA.t2k.a2m.gz, have 452207 columns in 1992 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2b8mA/nostruct-align/2b8mA.t2k.a2m.gz
# 2b8mA.t2k.a2m with 209 sequences, total weight= 209 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15448 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2b8mA/info/2b8mA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2b8mA/nostruct-align/2b8mA.t2k.a2m.gz, have 452316 columns in 1993 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1aho/nostruct-align/1aho.t2k.a2m.gz
# 1aho.t2k.a2m with 204 sequences, total weight= 10.6733 avg weight= 0.0523203 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1aho/info/1aho.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1aho/nostruct-align/1aho.t2k.a2m.gz, have 452380 columns in 1994 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yg9A/nostruct-align/1yg9A.t2k.a2m.gz
# 1yg9A.t2k.a2m with 791 sequences, total weight= 98.7331 avg weight= 0.124821 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30431 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yg9A/info/1yg9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yg9A/nostruct-align/1yg9A.t2k.a2m.gz, have 452710 columns in 1995 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rk6A/nostruct-align/1rk6A.t2k.a2m.gz
# 1rk6A.t2k.a2m with 1870 sequences, total weight= 1870 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.923072 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rk6A/info/1rk6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rk6A/nostruct-align/1rk6A.t2k.a2m.gz, have 453184 columns in 1996 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2f60K/nostruct-align/2f60K.t2k.a2m.gz
# 2f60K.t2k.a2m with 32 sequences, total weight= 5.95899 avg weight= 0.186218 17 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2f60K/info/2f60K.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2f60K/nostruct-align/2f60K.t2k.a2m.gz, have 453244 columns in 1997 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jboA/nostruct-align/1jboA.t2k.a2m.gz
# 1jboA.t2k.a2m with 406 sequences, total weight= 20.668 avg weight= 0.0509064 39 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jboA/info/1jboA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jboA/nostruct-align/1jboA.t2k.a2m.gz, have 453406 columns in 1998 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nwaA/nostruct-align/1nwaA.t2k.a2m.gz
# 1nwaA.t2k.a2m with 269 sequences, total weight= 16.7403 avg weight= 0.0622316 41 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nwaA/info/1nwaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nwaA/nostruct-align/1nwaA.t2k.a2m.gz, have 453574 columns in 1999 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j83A/nostruct-align/1j83A.t2k.a2m.gz
# 1j83A.t2k.a2m with 14 sequences, total weight= 2.99427 avg weight= 0.213876 14 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j83A/info/1j83A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1j83A/nostruct-align/1j83A.t2k.a2m.gz, have 453754 columns in 2000 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2iblA/nostruct-align/2iblA.t2k.a2m.gz
# 2iblA.t2k.a2m with 32 sequences, total weight= 11.6635 avg weight= 0.364483 22 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2iblA/info/2iblA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2iblA/nostruct-align/2iblA.t2k.a2m.gz, have 453862 columns in 2001 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vphA/nostruct-align/1vphA.t2k.a2m.gz
# 1vphA.t2k.a2m with 153 sequences, total weight= 18.3474 avg weight= 0.119918 42 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vphA/info/1vphA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vphA/nostruct-align/1vphA.t2k.a2m.gz, have 454000 columns in 2002 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54E/nostruct-align/1v54E.t2k.a2m.gz
# 1v54E.t2k.a2m with 27 sequences, total weight= 4.18494 avg weight= 0.154998 17 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54E/info/1v54E.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v54E/nostruct-align/1v54E.t2k.a2m.gz, have 454105 columns in 2003 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1odzA/nostruct-align/1odzA.t2k.a2m.gz
# 1odzA.t2k.a2m with 47 sequences, total weight= 35.6577 avg weight= 0.758674 26 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1odzA/info/1odzA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1odzA/nostruct-align/1odzA.t2k.a2m.gz, have 454484 columns in 2004 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2oaaA/nostruct-align/2oaaA.t2k.a2m.gz
# 2oaaA.t2k.a2m with 14 sequences, total weight= 13.3647 avg weight= 0.954624 17 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2oaaA/info/2oaaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2oaaA/nostruct-align/2oaaA.t2k.a2m.gz, have 454731 columns in 2005 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2h7mA/nostruct-align/2h7mA.t2k.a2m.gz
# 2h7mA.t2k.a2m with 5340 sequences, total weight= 1216.2 avg weight= 0.227753 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3386 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2h7mA/info/2h7mA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2h7mA/nostruct-align/2h7mA.t2k.a2m.gz, have 454999 columns in 2006 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nkd/nostruct-align/1nkd.t2k.a2m.gz
# 1nkd.t2k.a2m with 25 sequences, total weight= 3.69647 avg weight= 0.147859 15 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nkd/info/1nkd.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nkd/nostruct-align/1nkd.t2k.a2m.gz, have 455058 columns in 2007 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ug6A/nostruct-align/1ug6A.t2k.a2m.gz
# 1ug6A.t2k.a2m with 603 sequences, total weight= 47.4956 avg weight= 0.0787655 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30058 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ug6A/info/1ug6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1ug6A/nostruct-align/1ug6A.t2k.a2m.gz, have 455484 columns in 2008 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wzdA/nostruct-align/1wzdA.t2k.a2m.gz
# 1wzdA.t2k.a2m with 173 sequences, total weight= 54.8139 avg weight= 0.316843 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wzdA/info/1wzdA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wzdA/nostruct-align/1wzdA.t2k.a2m.gz, have 455693 columns in 2009 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p4oA/nostruct-align/1p4oA.t2k.a2m.gz
# 1p4oA.t2k.a2m with 10055 sequences, total weight= 10055 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1951 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p4oA/info/1p4oA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1p4oA/nostruct-align/1p4oA.t2k.a2m.gz, have 456001 columns in 2010 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xfiA/nostruct-align/1xfiA.t2k.a2m.gz
# 1xfiA.t2k.a2m with 44 sequences, total weight= 21.1811 avg weight= 0.481389 28 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xfiA/info/1xfiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xfiA/nostruct-align/1xfiA.t2k.a2m.gz, have 456344 columns in 2011 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1ajsA/nostruct-align/1ajsA.t2k.a2m.gz
# 1ajsA.t2k.a2m with 463 sequences, total weight= 463 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27474 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1ajsA/info/1ajsA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1ajsA/nostruct-align/1ajsA.t2k.a2m.gz, have 456756 columns in 2012 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zndA/nostruct-align/1zndA.t2k.a2m.gz
# 1zndA.t2k.a2m with 376 sequences, total weight= 376 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19451 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zndA/info/1zndA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zndA/nostruct-align/1zndA.t2k.a2m.gz, have 456913 columns in 2013 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cpq/nostruct-align/1cpq.t2k.a2m.gz
# 1cpq.t2k.a2m with 62 sequences, total weight= 31.1444 avg weight= 0.502328 38 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cpq/info/1cpq.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1cpq/nostruct-align/1cpq.t2k.a2m.gz, have 457042 columns in 2014 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2b7uA/nostruct-align/2b7uA.t2k.a2m.gz
# 2b7uA.t2k.a2m with 119 sequences, total weight= 34.2956 avg weight= 0.288199 43 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2b7uA/info/2b7uA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2b7uA/nostruct-align/2b7uA.t2k.a2m.gz, have 457293 columns in 2015 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c1kA/nostruct-align/1c1kA.t2k.a2m.gz
# 1c1kA.t2k.a2m with 18 sequences, total weight= 7.97624 avg weight= 0.443124 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c1kA/info/1c1kA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1c1kA/nostruct-align/1c1kA.t2k.a2m.gz, have 457510 columns in 2016 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o54A/nostruct-align/1o54A.t2k.a2m.gz
# 1o54A.t2k.a2m with 1115 sequences, total weight= 1115 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.914447 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o54A/info/1o54A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1o54A/nostruct-align/1o54A.t2k.a2m.gz, have 457775 columns in 2017 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gutA/nostruct-align/1gutA.t2k.a2m.gz
# 1gutA.t2k.a2m with 171 sequences, total weight= 26.4878 avg weight= 0.1549 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gutA/info/1gutA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gutA/nostruct-align/1gutA.t2k.a2m.gz, have 457842 columns in 2018 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oruA/nostruct-align/1oruA.t2k.a2m.gz
# 1oruA.t2k.a2m with 20 sequences, total weight= 14.8786 avg weight= 0.743929 20 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oruA/info/1oruA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oruA/nostruct-align/1oruA.t2k.a2m.gz, have 458024 columns in 2019 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g55A/nostruct-align/1g55A.t2k.a2m.gz
# 1g55A.t2k.a2m with 410 sequences, total weight= 410 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16385 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g55A/info/1g55A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1g55A/nostruct-align/1g55A.t2k.a2m.gz, have 458337 columns in 2020 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cqxA/nostruct-align/1cqxA.t2k.a2m.gz
# 1cqxA.t2k.a2m with 1148 sequences, total weight= 1148 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19678 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cqxA/info/1cqxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1cqxA/nostruct-align/1cqxA.t2k.a2m.gz, have 458740 columns in 2021 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wz8A/nostruct-align/1wz8A.t2k.a2m.gz
# 1wz8A.t2k.a2m with 1877 sequences, total weight= 741.412 avg weight= 0.394999 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.319 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wz8A/info/1wz8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wz8A/nostruct-align/1wz8A.t2k.a2m.gz, have 459003 columns in 2022 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2ipiA/nostruct-align/2ipiA.t2k.a2m.gz
# 2ipiA.t2k.a2m with 633 sequences, total weight= 633 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.945931 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2ipiA/info/2ipiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2ipiA/nostruct-align/2ipiA.t2k.a2m.gz, have 459495 columns in 2023 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lmb3/nostruct-align/1lmb3.t2k.a2m.gz
# 1lmb3.t2k.a2m with 339 sequences, total weight= 119.972 avg weight= 0.3539 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lmb3/info/1lmb3.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lmb3/nostruct-align/1lmb3.t2k.a2m.gz, have 459582 columns in 2024 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2ddxA/nostruct-align/2ddxA.t2k.a2m.gz
# 2ddxA.t2k.a2m with 74 sequences, total weight= 74 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08351 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2ddxA/info/2ddxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2ddxA/nostruct-align/2ddxA.t2k.a2m.gz, have 459906 columns in 2025 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zuhA/nostruct-align/1zuhA.t2k.a2m.gz
# 1zuhA.t2k.a2m with 746 sequences, total weight= 746 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1926 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zuhA/info/1zuhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zuhA/nostruct-align/1zuhA.t2k.a2m.gz, have 460057 columns in 2026 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1of8A/nostruct-align/1of8A.t2k.a2m.gz
# 1of8A.t2k.a2m with 470 sequences, total weight= 23.2845 avg weight= 0.0495415 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1of8A/info/1of8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1of8A/nostruct-align/1of8A.t2k.a2m.gz, have 460396 columns in 2027 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wleA/nostruct-align/1wleA.t2k.a2m.gz
# 1wleA.t2k.a2m with 629 sequences, total weight= 88.269 avg weight= 0.140332 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30053 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wleA/info/1wleA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wleA/nostruct-align/1wleA.t2k.a2m.gz, have 460861 columns in 2028 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vzmA/nostruct-align/1vzmA.t2k.a2m.gz
# 1vzmA.t2k.a2m with 30 sequences, total weight= 3.50865 avg weight= 0.116955 17 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vzmA/info/1vzmA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vzmA/nostruct-align/1vzmA.t2k.a2m.gz, have 460904 columns in 2029 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2iteA/nostruct-align/2iteA.t2k.a2m.gz
# 2iteA.t2k.a2m with 140 sequences, total weight= 23.4473 avg weight= 0.167481 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2iteA/info/2iteA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2iteA/nostruct-align/2iteA.t2k.a2m.gz, have 461025 columns in 2030 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cx7A/nostruct-align/2cx7A.t2k.a2m.gz
# 2cx7A.t2k.a2m with 42 sequences, total weight= 26.9148 avg weight= 0.640828 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cx7A/info/2cx7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cx7A/nostruct-align/2cx7A.t2k.a2m.gz, have 461154 columns in 2031 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nmlA/nostruct-align/2nmlA.t2k.a2m.gz
# 2nmlA.t2k.a2m with 49 sequences, total weight= 5.1068 avg weight= 0.10422 22 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nmlA/info/2nmlA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2n/2nmlA/nostruct-align/2nmlA.t2k.a2m.gz, have 461254 columns in 2032 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gn0A/nostruct-align/2gn0A.t2k.a2m.gz
# 2gn0A.t2k.a2m with 2594 sequences, total weight= 878.12 avg weight= 0.33852 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32484 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gn0A/info/2gn0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gn0A/nostruct-align/2gn0A.t2k.a2m.gz, have 461581 columns in 2033 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yx1A/nostruct-align/1yx1A.t2k.a2m.gz
# 1yx1A.t2k.a2m with 21 sequences, total weight= 14.1257 avg weight= 0.672651 24 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yx1A/info/1yx1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yx1A/nostruct-align/1yx1A.t2k.a2m.gz, have 461831 columns in 2034 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1euwA/nostruct-align/1euwA.t2k.a2m.gz
# 1euwA.t2k.a2m with 478 sequences, total weight= 123.203 avg weight= 0.257748 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30064 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1euwA/info/1euwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1euwA/nostruct-align/1euwA.t2k.a2m.gz, have 461967 columns in 2035 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1ah7/nostruct-align/1ah7.t2k.a2m.gz
# 1ah7.t2k.a2m with 61 sequences, total weight= 16.2458 avg weight= 0.266325 26 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1ah7/info/1ah7.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1ah7/nostruct-align/1ah7.t2k.a2m.gz, have 462212 columns in 2036 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2jc9A/nostruct-align/2jc9A.t2k.a2m.gz
# 2jc9A.t2k.a2m with 172 sequences, total weight= 38.9689 avg weight= 0.226563 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2jc9A/info/2jc9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2jc9A/nostruct-align/2jc9A.t2k.a2m.gz, have 462679 columns in 2037 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wt6A/nostruct-align/1wt6A.t2k.a2m.gz
# 1wt6A.t2k.a2m with 33 sequences, total weight= 2.24033 avg weight= 0.0678887 8 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wt6A/info/1wt6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wt6A/nostruct-align/1wt6A.t2k.a2m.gz, have 462744 columns in 2038 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mkzA/nostruct-align/1mkzA.t2k.a2m.gz
# 1mkzA.t2k.a2m with 209 sequences, total weight= 99.6763 avg weight= 0.47692 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30066 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mkzA/info/1mkzA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mkzA/nostruct-align/1mkzA.t2k.a2m.gz, have 462914 columns in 2039 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vqsA/nostruct-align/1vqsA.t2k.a2m.gz
# 1vqsA.t2k.a2m with 166 sequences, total weight= 67.1336 avg weight= 0.404419 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vqsA/info/1vqsA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vqsA/nostruct-align/1vqsA.t2k.a2m.gz, have 463024 columns in 2040 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gdgA/nostruct-align/2gdgA.t2k.a2m.gz
# 2gdgA.t2k.a2m with 144 sequences, total weight= 37.3878 avg weight= 0.259638 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gdgA/info/2gdgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gdgA/nostruct-align/2gdgA.t2k.a2m.gz, have 463138 columns in 2041 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i88A/nostruct-align/1i88A.t2k.a2m.gz
# 1i88A.t2k.a2m with 526 sequences, total weight= 76.32 avg weight= 0.145095 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30124 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i88A/info/1i88A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1i88A/nostruct-align/1i88A.t2k.a2m.gz, have 463527 columns in 2042 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qksA/nostruct-align/1qksA.t2k.a2m.gz
# 1qksA.t2k.a2m with 518 sequences, total weight= 76.85 avg weight= 0.148359 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qksA/info/1qksA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qksA/nostruct-align/1qksA.t2k.a2m.gz, have 464086 columns in 2043 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rzhH/nostruct-align/1rzhH.t2k.a2m.gz
# 1rzhH.t2k.a2m with 39 sequences, total weight= 5.74622 avg weight= 0.147339 23 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rzhH/info/1rzhH.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rzhH/nostruct-align/1rzhH.t2k.a2m.gz, have 464324 columns in 2044 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gkpA/nostruct-align/2gkpA.t2k.a2m.gz
# 2gkpA.t2k.a2m with 13 sequences, total weight= 7.87141 avg weight= 0.605493 18 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gkpA/info/2gkpA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gkpA/nostruct-align/2gkpA.t2k.a2m.gz, have 464488 columns in 2045 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zhrA/nostruct-align/1zhrA.t2k.a2m.gz
# 1zhrA.t2k.a2m with 4733 sequences, total weight= 4733 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28427 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zhrA/info/1zhrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zhrA/nostruct-align/1zhrA.t2k.a2m.gz, have 464726 columns in 2046 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x1eA/nostruct-align/1x1eA.t2k.a2m.gz
# 1x1eA.t2k.a2m with 14979 sequences, total weight= 14979 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26128 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x1eA/info/1x1eA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1x1eA/nostruct-align/1x1eA.t2k.a2m.gz, have 464965 columns in 2047 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2oj5A/nostruct-align/2oj5A.t2k.a2m.gz
# 2oj5A.t2k.a2m with 43 sequences, total weight= 4.45573 avg weight= 0.103622 17 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2oj5A/info/2oj5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2oj5A/nostruct-align/2oj5A.t2k.a2m.gz, have 465127 columns in 2048 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p1mA/nostruct-align/1p1mA.t2k.a2m.gz
# 1p1mA.t2k.a2m with 445 sequences, total weight= 445 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.963731 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p1mA/info/1p1mA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1p1mA/nostruct-align/1p1mA.t2k.a2m.gz, have 465531 columns in 2049 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ycdA/nostruct-align/1ycdA.t2k.a2m.gz
# 1ycdA.t2k.a2m with 103 sequences, total weight= 103 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07211 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ycdA/info/1ycdA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1ycdA/nostruct-align/1ycdA.t2k.a2m.gz, have 465768 columns in 2050 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n9pA/nostruct-align/1n9pA.t2k.a2m.gz
# 1n9pA.t2k.a2m with 186 sequences, total weight= 11.3725 avg weight= 0.0611423 31 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n9pA/info/1n9pA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1n9pA/nostruct-align/1n9pA.t2k.a2m.gz, have 465965 columns in 2051 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2o3sA/nostruct-align/2o3sA.t2k.a2m.gz
# 2o3sA.t2k.a2m with 57 sequences, total weight= 12.5038 avg weight= 0.219364 28 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2o3sA/info/2o3sA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2o3sA/nostruct-align/2o3sA.t2k.a2m.gz, have 466217 columns in 2052 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2c78A/nostruct-align/2c78A.t2k.a2m.gz
# 2c78A.t2k.a2m with 10713 sequences, total weight= 10713 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26354 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2c78A/info/2c78A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2c78A/nostruct-align/2c78A.t2k.a2m.gz, have 466614 columns in 2053 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dszA/nostruct-align/1dszA.t2k.a2m.gz
# 1dszA.t2k.a2m with 1319 sequences, total weight= 17.6073 avg weight= 0.013349 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dszA/info/1dszA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dszA/nostruct-align/1dszA.t2k.a2m.gz, have 466689 columns in 2054 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j34A/nostruct-align/1j34A.t2k.a2m.gz
# 1j34A.t2k.a2m with 1499 sequences, total weight= 1499 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08631 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j34A/info/1j34A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1j34A/nostruct-align/1j34A.t2k.a2m.gz, have 466818 columns in 2055 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vziA/nostruct-align/1vziA.t2k.a2m.gz
# 1vziA.t2k.a2m with 33 sequences, total weight= 10.9483 avg weight= 0.331767 26 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vziA/info/1vziA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vziA/nostruct-align/1vziA.t2k.a2m.gz, have 466943 columns in 2056 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fxlA/nostruct-align/1fxlA.t2k.a2m.gz
# 1fxlA.t2k.a2m with 1623 sequences, total weight= 1623 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25747 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fxlA/info/1fxlA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fxlA/nostruct-align/1fxlA.t2k.a2m.gz, have 467110 columns in 2057 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fpeA/nostruct-align/2fpeA.t2k.a2m.gz
# 2fpeA.t2k.a2m with 490 sequences, total weight= 25.9 avg weight= 0.0528571 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fpeA/info/2fpeA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fpeA/nostruct-align/2fpeA.t2k.a2m.gz, have 467172 columns in 2058 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2jbhA/nostruct-align/2jbhA.t2k.a2m.gz
# 2jbhA.t2k.a2m with 1515 sequences, total weight= 1515 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27847 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2jbhA/info/2jbhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2jbhA/nostruct-align/2jbhA.t2k.a2m.gz, have 467380 columns in 2059 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uxoA/nostruct-align/1uxoA.t2k.a2m.gz
# 1uxoA.t2k.a2m with 90 sequences, total weight= 90 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24016 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uxoA/info/1uxoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uxoA/nostruct-align/1uxoA.t2k.a2m.gz, have 467566 columns in 2060 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2dlbA/nostruct-align/2dlbA.t2k.a2m.gz
# 2dlbA.t2k.a2m with 3 sequences, total weight= 1.89535 avg weight= 0.631783 9 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2dlbA/info/2dlbA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2dlbA/nostruct-align/2dlbA.t2k.a2m.gz, have 467636 columns in 2061 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2dpoA/nostruct-align/2dpoA.t2k.a2m.gz
# 2dpoA.t2k.a2m with 2264 sequences, total weight= 172.818 avg weight= 0.0763332 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31026 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2dpoA/info/2dpoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2dpoA/nostruct-align/2dpoA.t2k.a2m.gz, have 467946 columns in 2062 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2e/2ex0A/nostruct-align/2ex0A.t2k.a2m.gz
# 2ex0A.t2k.a2m with 12 sequences, total weight= 5.26437 avg weight= 0.438697 14 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2e/2ex0A/info/2ex0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2e/2ex0A/nostruct-align/2ex0A.t2k.a2m.gz, have 468338 columns in 2063 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1z7aA/nostruct-align/1z7aA.t2k.a2m.gz
# 1z7aA.t2k.a2m with 426 sequences, total weight= 426 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16342 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1z7aA/info/1z7aA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1z7aA/nostruct-align/1z7aA.t2k.a2m.gz, have 468639 columns in 2064 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qmvA/nostruct-align/1qmvA.t2k.a2m.gz
# 1qmvA.t2k.a2m with 459 sequences, total weight= 113.269 avg weight= 0.246773 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30129 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qmvA/info/1qmvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qmvA/nostruct-align/1qmvA.t2k.a2m.gz, have 468836 columns in 2065 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mdc/nostruct-align/1mdc.t2k.a2m.gz
# 1mdc.t2k.a2m with 265 sequences, total weight= 26.0914 avg weight= 0.0984583 39 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mdc/info/1mdc.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mdc/nostruct-align/1mdc.t2k.a2m.gz, have 468967 columns in 2066 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nx4A/nostruct-align/2nx4A.t2k.a2m.gz
# 2nx4A.t2k.a2m with 4302 sequences, total weight= 4302 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.892362 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nx4A/info/2nx4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2n/2nx4A/nostruct-align/2nx4A.t2k.a2m.gz, have 469161 columns in 2067 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jf3A/nostruct-align/1jf3A.t2k.a2m.gz
# 1jf3A.t2k.a2m with 1173 sequences, total weight= 115.561 avg weight= 0.0985177 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30873 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jf3A/info/1jf3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jf3A/nostruct-align/1jf3A.t2k.a2m.gz, have 469308 columns in 2068 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mkkA/nostruct-align/1mkkA.t2k.a2m.gz
# 1mkkA.t2k.a2m with 185 sequences, total weight= 13.8354 avg weight= 0.0747859 38 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mkkA/info/1mkkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mkkA/nostruct-align/1mkkA.t2k.a2m.gz, have 469401 columns in 2069 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n55A/nostruct-align/1n55A.t2k.a2m.gz
# 1n55A.t2k.a2m with 353 sequences, total weight= 26.3015 avg weight= 0.0745086 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n55A/info/1n55A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1n55A/nostruct-align/1n55A.t2k.a2m.gz, have 469650 columns in 2070 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xzoA/nostruct-align/1xzoA.t2k.a2m.gz
# 1xzoA.t2k.a2m with 722 sequences, total weight= 722 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2432 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xzoA/info/1xzoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xzoA/nostruct-align/1xzoA.t2k.a2m.gz, have 469822 columns in 2071 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2htdA/nostruct-align/2htdA.t2k.a2m.gz
# 2htdA.t2k.a2m with 136 sequences, total weight= 136 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19175 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2htdA/info/2htdA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2htdA/nostruct-align/2htdA.t2k.a2m.gz, have 469943 columns in 2072 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fu4A/nostruct-align/2fu4A.t2k.a2m.gz
# 2fu4A.t2k.a2m with 728 sequences, total weight= 56.4461 avg weight= 0.0775358 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30129 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fu4A/info/2fu4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fu4A/nostruct-align/2fu4A.t2k.a2m.gz, have 470024 columns in 2073 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cdcA/nostruct-align/2cdcA.t2k.a2m.gz
# 2cdcA.t2k.a2m with 2875 sequences, total weight= 2875 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26702 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cdcA/info/2cdcA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cdcA/nostruct-align/2cdcA.t2k.a2m.gz, have 470383 columns in 2074 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u07A/nostruct-align/1u07A.t2k.a2m.gz
# 1u07A.t2k.a2m with 271 sequences, total weight= 86.5288 avg weight= 0.319294 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30064 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u07A/info/1u07A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1u07A/nostruct-align/1u07A.t2k.a2m.gz, have 470473 columns in 2075 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cjsC/nostruct-align/2cjsC.t2k.a2m.gz
# 2cjsC.t2k.a2m with 71 sequences, total weight= 2.38521 avg weight= 0.0335945 15 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cjsC/info/2cjsC.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cjsC/nostruct-align/2cjsC.t2k.a2m.gz, have 470527 columns in 2076 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q9uA/nostruct-align/1q9uA.t2k.a2m.gz
# 1q9uA.t2k.a2m with 46 sequences, total weight= 46 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25164 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q9uA/info/1q9uA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1q9uA/nostruct-align/1q9uA.t2k.a2m.gz, have 470655 columns in 2077 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fvvA/nostruct-align/2fvvA.t2k.a2m.gz
# 2fvvA.t2k.a2m with 230 sequences, total weight= 230 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21506 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fvvA/info/2fvvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fvvA/nostruct-align/2fvvA.t2k.a2m.gz, have 470790 columns in 2078 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bkfA/nostruct-align/2bkfA.t2k.a2m.gz
# 2bkfA.t2k.a2m with 34 sequences, total weight= 6.11783 avg weight= 0.179936 17 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bkfA/info/2bkfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bkfA/nostruct-align/2bkfA.t2k.a2m.gz, have 470876 columns in 2079 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j71A/nostruct-align/1j71A.t2k.a2m.gz
# 1j71A.t2k.a2m with 508 sequences, total weight= 113.833 avg weight= 0.22408 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30467 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j71A/info/1j71A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1j71A/nostruct-align/1j71A.t2k.a2m.gz, have 471210 columns in 2080 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h32A/nostruct-align/1h32A.t2k.a2m.gz
# 1h32A.t2k.a2m with 50 sequences, total weight= 39.4239 avg weight= 0.788478 27 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h32A/info/1h32A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h32A/nostruct-align/1h32A.t2k.a2m.gz, have 471471 columns in 2081 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2h88B/nostruct-align/2h88B.t2k.a2m.gz
# 2h88B.t2k.a2m with 1174 sequences, total weight= 340.236 avg weight= 0.289809 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30669 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2h88B/info/2h88B.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2h88B/nostruct-align/2h88B.t2k.a2m.gz, have 471710 columns in 2082 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3l/3lzt/nostruct-align/3lzt.t2k.a2m.gz
# 3lzt.t2k.a2m with 448 sequences, total weight= 8.60143 avg weight= 0.0191996 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3l/3lzt/info/3lzt.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/3l/3lzt/nostruct-align/3lzt.t2k.a2m.gz, have 471839 columns in 2083 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kmvA/nostruct-align/1kmvA.t2k.a2m.gz
# 1kmvA.t2k.a2m with 392 sequences, total weight= 87.1975 avg weight= 0.222443 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3019 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kmvA/info/1kmvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kmvA/nostruct-align/1kmvA.t2k.a2m.gz, have 472024 columns in 2084 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2dqwA/nostruct-align/2dqwA.t2k.a2m.gz
# 2dqwA.t2k.a2m with 1071 sequences, total weight= 61.3618 avg weight= 0.0572939 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30113 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2dqwA/info/2dqwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2dqwA/nostruct-align/2dqwA.t2k.a2m.gz, have 472274 columns in 2085 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bv2A/nostruct-align/2bv2A.t2k.a2m.gz
# 2bv2A.t2k.a2m with 875 sequences, total weight= 47.3507 avg weight= 0.054115 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3004 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bv2A/info/2bv2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bv2A/nostruct-align/2bv2A.t2k.a2m.gz, have 472357 columns in 2086 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nxmA/nostruct-align/1nxmA.t2k.a2m.gz
# 1nxmA.t2k.a2m with 229 sequences, total weight= 19.6702 avg weight= 0.085896 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nxmA/info/1nxmA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nxmA/nostruct-align/1nxmA.t2k.a2m.gz, have 472551 columns in 2087 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s9rA/nostruct-align/1s9rA.t2k.a2m.gz
# 1s9rA.t2k.a2m with 180 sequences, total weight= 108.845 avg weight= 0.604697 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30035 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s9rA/info/1s9rA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1s9rA/nostruct-align/1s9rA.t2k.a2m.gz, have 472960 columns in 2088 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eaqA/nostruct-align/1eaqA.t2k.a2m.gz
# 1eaqA.t2k.a2m with 102 sequences, total weight= 3.34364 avg weight= 0.0327808 15 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eaqA/info/1eaqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1eaqA/nostruct-align/1eaqA.t2k.a2m.gz, have 473084 columns in 2089 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2jbzA/nostruct-align/2jbzA.t2k.a2m.gz
# 2jbzA.t2k.a2m with 311 sequences, total weight= 18.717 avg weight= 0.0601832 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2jbzA/info/2jbzA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2jbzA/nostruct-align/2jbzA.t2k.a2m.gz, have 473208 columns in 2090 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1ls1A/nostruct-align/1ls1A.t2k.a2m.gz
# 1ls1A.t2k.a2m with 838 sequences, total weight= 838 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2049 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1ls1A/info/1ls1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1ls1A/nostruct-align/1ls1A.t2k.a2m.gz, have 473497 columns in 2091 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r85A/nostruct-align/1r85A.t2k.a2m.gz
# 1r85A.t2k.a2m with 289 sequences, total weight= 92.3389 avg weight= 0.319512 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3004 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r85A/info/1r85A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r85A/nostruct-align/1r85A.t2k.a2m.gz, have 473868 columns in 2092 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xakA/nostruct-align/1xakA.t2k.a2m.gz
# 1xakA.t2k.a2m with 13 sequences, total weight= 1.91719 avg weight= 0.147476 7 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xakA/info/1xakA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xakA/nostruct-align/1xakA.t2k.a2m.gz, have 473936 columns in 2093 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hp1A/nostruct-align/1hp1A.t2k.a2m.gz
# 1hp1A.t2k.a2m with 309 sequences, total weight= 309 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25075 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hp1A/info/1hp1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hp1A/nostruct-align/1hp1A.t2k.a2m.gz, have 474452 columns in 2094 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3s/3seb/nostruct-align/3seb.t2k.a2m.gz
# 3seb.t2k.a2m with 202 sequences, total weight= 48.9276 avg weight= 0.242216 45 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3s/3seb/info/3seb.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/3s/3seb/nostruct-align/3seb.t2k.a2m.gz, have 474690 columns in 2095 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fhfA/nostruct-align/2fhfA.t2k.a2m.gz
# 2fhfA.t2k.a2m with 1119 sequences, total weight= 1119 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0984 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fhfA/info/2fhfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fhfA/nostruct-align/2fhfA.t2k.a2m.gz, have 475742 columns in 2096 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p5vB/nostruct-align/1p5vB.t2k.a2m.gz
# 1p5vB.t2k.a2m with 11 sequences, total weight= 1.85207 avg weight= 0.16837 8 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p5vB/info/1p5vB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1p5vB/nostruct-align/1p5vB.t2k.a2m.gz, have 475878 columns in 2097 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gf3A/nostruct-align/2gf3A.t2k.a2m.gz
# 2gf3A.t2k.a2m with 1436 sequences, total weight= 1436 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.983533 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gf3A/info/2gf3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gf3A/nostruct-align/2gf3A.t2k.a2m.gz, have 476263 columns in 2098 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2i5iA/nostruct-align/2i5iA.t2k.a2m.gz
# 2i5iA.t2k.a2m with 189 sequences, total weight= 186.214 avg weight= 0.985261 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2i5iA/info/2i5iA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2i5iA/nostruct-align/2i5iA.t2k.a2m.gz, have 476524 columns in 2099 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cfcA/nostruct-align/2cfcA.t2k.a2m.gz
# 2cfcA.t2k.a2m with 15452 sequences, total weight= 15452 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2718 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cfcA/info/2cfcA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cfcA/nostruct-align/2cfcA.t2k.a2m.gz, have 476774 columns in 2100 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vh4A/nostruct-align/1vh4A.t2k.a2m.gz
# 1vh4A.t2k.a2m with 262 sequences, total weight= 262 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28995 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vh4A/info/1vh4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vh4A/nostruct-align/1vh4A.t2k.a2m.gz, have 477184 columns in 2101 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o97C/nostruct-align/1o97C.t2k.a2m.gz
# 1o97C.t2k.a2m with 182 sequences, total weight= 59.2766 avg weight= 0.325696 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o97C/info/1o97C.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1o97C/nostruct-align/1o97C.t2k.a2m.gz, have 477435 columns in 2102 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qreA/nostruct-align/1qreA.t2k.a2m.gz
# 1qreA.t2k.a2m with 331 sequences, total weight= 331 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19743 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qreA/info/1qreA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qreA/nostruct-align/1qreA.t2k.a2m.gz, have 477645 columns in 2103 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fueA/nostruct-align/2fueA.t2k.a2m.gz
# 2fueA.t2k.a2m with 232 sequences, total weight= 232 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14879 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fueA/info/2fueA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fueA/nostruct-align/2fueA.t2k.a2m.gz, have 477891 columns in 2104 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gqiA/nostruct-align/1gqiA.t2k.a2m.gz
# 1gqiA.t2k.a2m with 23 sequences, total weight= 5.35699 avg weight= 0.232913 22 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gqiA/info/1gqiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gqiA/nostruct-align/1gqiA.t2k.a2m.gz, have 478599 columns in 2105 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mw9X/nostruct-align/1mw9X.t2k.a2m.gz
# 1mw9X.t2k.a2m with 386 sequences, total weight= 68.0783 avg weight= 0.176369 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30177 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mw9X/info/1mw9X.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mw9X/nostruct-align/1mw9X.t2k.a2m.gz, have 479155 columns in 2106 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zvtA/nostruct-align/1zvtA.t2k.a2m.gz
# 1zvtA.t2k.a2m with 726 sequences, total weight= 70.2027 avg weight= 0.096698 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30118 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zvtA/info/1zvtA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zvtA/nostruct-align/1zvtA.t2k.a2m.gz, have 479400 columns in 2107 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rwzA/nostruct-align/1rwzA.t2k.a2m.gz
# 1rwzA.t2k.a2m with 136 sequences, total weight= 33.4433 avg weight= 0.245906 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rwzA/info/1rwzA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rwzA/nostruct-align/1rwzA.t2k.a2m.gz, have 479644 columns in 2108 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h12A/nostruct-align/1h12A.t2k.a2m.gz
# 1h12A.t2k.a2m with 48 sequences, total weight= 41.8814 avg weight= 0.872529 30 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h12A/info/1h12A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h12A/nostruct-align/1h12A.t2k.a2m.gz, have 480048 columns in 2109 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2jc5A/nostruct-align/2jc5A.t2k.a2m.gz
# 2jc5A.t2k.a2m with 1158 sequences, total weight= 676.3 avg weight= 0.584024 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3107 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2jc5A/info/2jc5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2jc5A/nostruct-align/2jc5A.t2k.a2m.gz, have 480307 columns in 2110 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kqfC/nostruct-align/1kqfC.t2k.a2m.gz
# 1kqfC.t2k.a2m with 102 sequences, total weight= 102 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25437 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kqfC/info/1kqfC.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kqfC/nostruct-align/1kqfC.t2k.a2m.gz, have 480523 columns in 2111 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n0wB/nostruct-align/1n0wB.t2k.a2m.gz
# 1n0wB.t2k.a2m with 25 sequences, total weight= 3.14461 avg weight= 0.125784 13 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n0wB/info/1n0wB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1n0wB/nostruct-align/1n0wB.t2k.a2m.gz, have 480556 columns in 2112 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l6xB/nostruct-align/1l6xB.t2k.a2m.gz
# 1l6xB.t2k.a2m with 25 sequences, total weight= 3.25122 avg weight= 0.130049 12 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l6xB/info/1l6xB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1l6xB/nostruct-align/1l6xB.t2k.a2m.gz, have 480590 columns in 2113 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hxiA/nostruct-align/1hxiA.t2k.a2m.gz
# 1hxiA.t2k.a2m with 553 sequences, total weight= 553 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13107 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hxiA/info/1hxiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hxiA/nostruct-align/1hxiA.t2k.a2m.gz, have 480702 columns in 2114 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kshB/nostruct-align/1kshB.t2k.a2m.gz
# 1kshB.t2k.a2m with 34 sequences, total weight= 6.92396 avg weight= 0.203646 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kshB/info/1kshB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kshB/nostruct-align/1kshB.t2k.a2m.gz, have 480844 columns in 2115 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a4iA/nostruct-align/1a4iA.t2k.a2m.gz
# 1a4iA.t2k.a2m with 252 sequences, total weight= 21.0085 avg weight= 0.0833671 43 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a4iA/info/1a4iA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1a4iA/nostruct-align/1a4iA.t2k.a2m.gz, have 481129 columns in 2116 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fr5A/nostruct-align/2fr5A.t2k.a2m.gz
# 2fr5A.t2k.a2m with 499 sequences, total weight= 92.1223 avg weight= 0.184614 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30116 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fr5A/info/2fr5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fr5A/nostruct-align/2fr5A.t2k.a2m.gz, have 481265 columns in 2117 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hq1A/nostruct-align/1hq1A.t2k.a2m.gz
# 1hq1A.t2k.a2m with 237 sequences, total weight= 12.6468 avg weight= 0.053362 38 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hq1A/info/1hq1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hq1A/nostruct-align/1hq1A.t2k.a2m.gz, have 481341 columns in 2118 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1aoeA/nostruct-align/1aoeA.t2k.a2m.gz
# 1aoeA.t2k.a2m with 403 sequences, total weight= 107.026 avg weight= 0.265574 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30153 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1aoeA/info/1aoeA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1aoeA/nostruct-align/1aoeA.t2k.a2m.gz, have 481533 columns in 2119 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wcv1/nostruct-align/1wcv1.t2k.a2m.gz
# 1wcv1.t2k.a2m with 3199 sequences, total weight= 3199 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03376 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wcv1/info/1wcv1.stride-mixed.strand_sep
WARNING: skipping f, since it is lower case.
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wcv1/nostruct-align/1wcv1.t2k.a2m.gz, have 481776 columns in 2120 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gkeA/nostruct-align/2gkeA.t2k.a2m.gz
# 2gkeA.t2k.a2m with 457 sequences, total weight= 37.7986 avg weight= 0.0827104 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30059 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gkeA/info/2gkeA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gkeA/nostruct-align/2gkeA.t2k.a2m.gz, have 482050 columns in 2121 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ea5A/nostruct-align/1ea5A.t2k.a2m.gz
# 1ea5A.t2k.a2m with 534 sequences, total weight= 476.402 avg weight= 0.892138 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30169 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ea5A/info/1ea5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1ea5A/nostruct-align/1ea5A.t2k.a2m.gz, have 482582 columns in 2122 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wojA/nostruct-align/1wojA.t2k.a2m.gz
# 1wojA.t2k.a2m with 23 sequences, total weight= 3.02274 avg weight= 0.131423 15 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wojA/info/1wojA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wojA/nostruct-align/1wojA.t2k.a2m.gz, have 482791 columns in 2123 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c5eA/nostruct-align/1c5eA.t2k.a2m.gz
# 1c5eA.t2k.a2m with 15 sequences, total weight= 3.27302 avg weight= 0.218201 14 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c5eA/info/1c5eA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1c5eA/nostruct-align/1c5eA.t2k.a2m.gz, have 482886 columns in 2124 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2d73A/nostruct-align/2d73A.t2k.a2m.gz
# 2d73A.t2k.a2m with 81 sequences, total weight= 28.2628 avg weight= 0.348924 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2d73A/info/2d73A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2d73A/nostruct-align/2d73A.t2k.a2m.gz, have 483603 columns in 2125 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bk8A/nostruct-align/2bk8A.t2k.a2m.gz
# 2bk8A.t2k.a2m with 10048 sequences, total weight= 10048 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09883 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bk8A/info/2bk8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bk8A/nostruct-align/2bk8A.t2k.a2m.gz, have 483700 columns in 2126 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p3dA/nostruct-align/1p3dA.t2k.a2m.gz
# 1p3dA.t2k.a2m with 734 sequences, total weight= 734 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15941 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p3dA/info/1p3dA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1p3dA/nostruct-align/1p3dA.t2k.a2m.gz, have 484163 columns in 2127 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fctA/nostruct-align/2fctA.t2k.a2m.gz
# 2fctA.t2k.a2m with 177 sequences, total weight= 177 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13668 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fctA/info/2fctA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fctA/nostruct-align/2fctA.t2k.a2m.gz, have 484467 columns in 2128 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x8qA/nostruct-align/1x8qA.t2k.a2m.gz
# 1x8qA.t2k.a2m with 34 sequences, total weight= 16.9773 avg weight= 0.499333 26 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x8qA/info/1x8qA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1x8qA/nostruct-align/1x8qA.t2k.a2m.gz, have 484651 columns in 2129 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d0qA/nostruct-align/1d0qA.t2k.a2m.gz
# 1d0qA.t2k.a2m with 191 sequences, total weight= 23.7869 avg weight= 0.124539 44 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d0qA/info/1d0qA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1d0qA/nostruct-align/1d0qA.t2k.a2m.gz, have 484753 columns in 2130 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gpuA/nostruct-align/2gpuA.t2k.a2m.gz
# 2gpuA.t2k.a2m with 2763 sequences, total weight= 2763 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2321 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gpuA/info/2gpuA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gpuA/nostruct-align/2gpuA.t2k.a2m.gz, have 484975 columns in 2131 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2a2kA/nostruct-align/2a2kA.t2k.a2m.gz
# 2a2kA.t2k.a2m with 803 sequences, total weight= 803 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15277 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2a2kA/info/2a2kA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2a2kA/nostruct-align/2a2kA.t2k.a2m.gz, have 485146 columns in 2132 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nzaA/nostruct-align/1nzaA.t2k.a2m.gz
# 1nzaA.t2k.a2m with 64 sequences, total weight= 13.2412 avg weight= 0.206893 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nzaA/info/1nzaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nzaA/nostruct-align/1nzaA.t2k.a2m.gz, have 485249 columns in 2133 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hbwA/nostruct-align/2hbwA.t2k.a2m.gz
# 2hbwA.t2k.a2m with 1103 sequences, total weight= 1103 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23149 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hbwA/info/2hbwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hbwA/nostruct-align/2hbwA.t2k.a2m.gz, have 485469 columns in 2134 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dkiA/nostruct-align/1dkiA.t2k.a2m.gz
# 1dkiA.t2k.a2m with 28 sequences, total weight= 7.1318 avg weight= 0.254707 18 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dkiA/info/1dkiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dkiA/nostruct-align/1dkiA.t2k.a2m.gz, have 485772 columns in 2135 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2onsA/nostruct-align/2onsA.t2k.a2m.gz
# 2onsA.t2k.a2m with 484 sequences, total weight= 484 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.949048 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2onsA/info/2onsA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2onsA/nostruct-align/2onsA.t2k.a2m.gz, have 486086 columns in 2136 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fs7A/nostruct-align/1fs7A.t2k.a2m.gz
# 1fs7A.t2k.a2m with 35 sequences, total weight= 10.4951 avg weight= 0.29986 24 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fs7A/info/1fs7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fs7A/nostruct-align/1fs7A.t2k.a2m.gz, have 486557 columns in 2137 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eazA/nostruct-align/1eazA.t2k.a2m.gz
# 1eazA.t2k.a2m with 841 sequences, total weight= 841 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14191 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eazA/info/1eazA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1eazA/nostruct-align/1eazA.t2k.a2m.gz, have 486660 columns in 2138 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xy7A/nostruct-align/1xy7A.t2k.a2m.gz
# 1xy7A.t2k.a2m with 107 sequences, total weight= 77.0523 avg weight= 0.720115 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xy7A/info/1xy7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xy7A/nostruct-align/1xy7A.t2k.a2m.gz, have 486780 columns in 2139 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1ds1A/nostruct-align/1ds1A.t2k.a2m.gz
# 1ds1A.t2k.a2m with 51 sequences, total weight= 51 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10703 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1ds1A/info/1ds1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1ds1A/nostruct-align/1ds1A.t2k.a2m.gz, have 487103 columns in 2140 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g8qA/nostruct-align/1g8qA.t2k.a2m.gz
# 1g8qA.t2k.a2m with 41 sequences, total weight= 15.1361 avg weight= 0.369173 31 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g8qA/info/1g8qA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1g8qA/nostruct-align/1g8qA.t2k.a2m.gz, have 487193 columns in 2141 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zd0A/nostruct-align/1zd0A.t2k.a2m.gz
# 1zd0A.t2k.a2m with 21 sequences, total weight= 19.3799 avg weight= 0.922854 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zd0A/info/1zd0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zd0A/nostruct-align/1zd0A.t2k.a2m.gz, have 487334 columns in 2142 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pjxA/nostruct-align/1pjxA.t2k.a2m.gz
# 1pjxA.t2k.a2m with 271 sequences, total weight= 271 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20043 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pjxA/info/1pjxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pjxA/nostruct-align/1pjxA.t2k.a2m.gz, have 487648 columns in 2143 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1npsA/nostruct-align/1npsA.t2k.a2m.gz
# 1npsA.t2k.a2m with 88 sequences, total weight= 53.6169 avg weight= 0.609283 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1npsA/info/1npsA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1npsA/nostruct-align/1npsA.t2k.a2m.gz, have 487736 columns in 2144 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fmpA/nostruct-align/2fmpA.t2k.a2m.gz
# 2fmpA.t2k.a2m with 311 sequences, total weight= 111.41 avg weight= 0.35823 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30252 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fmpA/info/2fmpA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fmpA/nostruct-align/2fmpA.t2k.a2m.gz, have 488062 columns in 2145 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ypqA/nostruct-align/1ypqA.t2k.a2m.gz
# 1ypqA.t2k.a2m with 1745 sequences, total weight= 1745 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17484 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ypqA/info/1ypqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1ypqA/nostruct-align/1ypqA.t2k.a2m.gz, have 488193 columns in 2146 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hiyA/nostruct-align/2hiyA.t2k.a2m.gz
# 2hiyA.t2k.a2m with 91 sequences, total weight= 64.5646 avg weight= 0.709502 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hiyA/info/2hiyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hiyA/nostruct-align/2hiyA.t2k.a2m.gz, have 488373 columns in 2147 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kw4A/nostruct-align/1kw4A.t2k.a2m.gz
# 1kw4A.t2k.a2m with 244 sequences, total weight= 49.3693 avg weight= 0.202333 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30031 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kw4A/info/1kw4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kw4A/nostruct-align/1kw4A.t2k.a2m.gz, have 488443 columns in 2148 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iq5B/nostruct-align/1iq5B.t2k.a2m.gz
# 1iq5B.t2k.a2m with 7 sequences, total weight= 1.7499 avg weight= 0.249986 8 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iq5B/info/1iq5B.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1iq5B/nostruct-align/1iq5B.t2k.a2m.gz, have 488467 columns in 2149 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2ijaA/nostruct-align/2ijaA.t2k.a2m.gz
# 2ijaA.t2k.a2m with 285 sequences, total weight= 285 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24208 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2ijaA/info/2ijaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2ijaA/nostruct-align/2ijaA.t2k.a2m.gz, have 488759 columns in 2150 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2odkA/nostruct-align/2odkA.t2k.a2m.gz
# 2odkA.t2k.a2m with 13 sequences, total weight= 4.75181 avg weight= 0.365524 17 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2odkA/info/2odkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2odkA/nostruct-align/2odkA.t2k.a2m.gz, have 488810 columns in 2151 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m4jA/nostruct-align/1m4jA.t2k.a2m.gz
# 1m4jA.t2k.a2m with 172 sequences, total weight= 64.8833 avg weight= 0.377228 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m4jA/info/1m4jA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m4jA/nostruct-align/1m4jA.t2k.a2m.gz, have 488943 columns in 2152 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mnnA/nostruct-align/1mnnA.t2k.a2m.gz
# 1mnnA.t2k.a2m with 58 sequences, total weight= 58 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2741 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mnnA/info/1mnnA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mnnA/nostruct-align/1mnnA.t2k.a2m.gz, have 489233 columns in 2153 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fe5A/nostruct-align/2fe5A.t2k.a2m.gz
# 2fe5A.t2k.a2m with 4409 sequences, total weight= 313.904 avg weight= 0.0711961 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.33655 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fe5A/info/2fe5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fe5A/nostruct-align/2fe5A.t2k.a2m.gz, have 489327 columns in 2154 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w27A/nostruct-align/1w27A.t2k.a2m.gz
# 1w27A.t2k.a2m with 366 sequences, total weight= 30.3377 avg weight= 0.0828898 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w27A/info/1w27A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w27A/nostruct-align/1w27A.t2k.a2m.gz, have 490017 columns in 2155 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yspA/nostruct-align/1yspA.t2k.a2m.gz
# 1yspA.t2k.a2m with 701 sequences, total weight= 701 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27273 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yspA/info/1yspA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yspA/nostruct-align/1yspA.t2k.a2m.gz, have 490181 columns in 2156 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hrcA/nostruct-align/2hrcA.t2k.a2m.gz
# 2hrcA.t2k.a2m with 724 sequences, total weight= 91.9186 avg weight= 0.126959 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30265 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hrcA/info/2hrcA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hrcA/nostruct-align/2hrcA.t2k.a2m.gz, have 490540 columns in 2157 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mdoA/nostruct-align/1mdoA.t2k.a2m.gz
# 1mdoA.t2k.a2m with 959 sequences, total weight= 959 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00442 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mdoA/info/1mdoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mdoA/nostruct-align/1mdoA.t2k.a2m.gz, have 490905 columns in 2158 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f1mA/nostruct-align/1f1mA.t2k.a2m.gz
# 1f1mA.t2k.a2m with 304 sequences, total weight= 5.90031 avg weight= 0.0194089 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f1mA/info/1f1mA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1f1mA/nostruct-align/1f1mA.t2k.a2m.gz, have 491067 columns in 2159 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vkkA/nostruct-align/1vkkA.t2k.a2m.gz
# 1vkkA.t2k.a2m with 248 sequences, total weight= 56.733 avg weight= 0.228762 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vkkA/info/1vkkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vkkA/nostruct-align/1vkkA.t2k.a2m.gz, have 491204 columns in 2160 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2aj6A/nostruct-align/2aj6A.t2k.a2m.gz
# 2aj6A.t2k.a2m with 1046 sequences, total weight= 1046 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.90321 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2aj6A/info/2aj6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2aj6A/nostruct-align/2aj6A.t2k.a2m.gz, have 491324 columns in 2161 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pp0A/nostruct-align/1pp0A.t2k.a2m.gz
# 1pp0A.t2k.a2m with 20 sequences, total weight= 6.95882 avg weight= 0.347941 18 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pp0A/info/1pp0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pp0A/nostruct-align/1pp0A.t2k.a2m.gz, have 491515 columns in 2162 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2ckiA/nostruct-align/2ckiA.t2k.a2m.gz
# 2ckiA.t2k.a2m with 94 sequences, total weight= 67.4581 avg weight= 0.717639 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2ckiA/info/2ckiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2ckiA/nostruct-align/2ckiA.t2k.a2m.gz, have 491777 columns in 2163 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n7sA/nostruct-align/1n7sA.t2k.a2m.gz
# 1n7sA.t2k.a2m with 140 sequences, total weight= 20.5833 avg weight= 0.147024 43 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n7sA/info/1n7sA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1n7sA/nostruct-align/1n7sA.t2k.a2m.gz, have 491840 columns in 2164 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2d4pA/nostruct-align/2d4pA.t2k.a2m.gz
# 2d4pA.t2k.a2m with 5 sequences, total weight= 3.03369 avg weight= 0.606739 9 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2d4pA/info/2d4pA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2d4pA/nostruct-align/2d4pA.t2k.a2m.gz, have 491970 columns in 2165 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kgsA/nostruct-align/1kgsA.t2k.a2m.gz
# 1kgsA.t2k.a2m with 2190 sequences, total weight= 2190 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20682 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kgsA/info/1kgsA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kgsA/nostruct-align/1kgsA.t2k.a2m.gz, have 492189 columns in 2166 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hp0A/nostruct-align/2hp0A.t2k.a2m.gz
# 2hp0A.t2k.a2m with 284 sequences, total weight= 217.101 avg weight= 0.764442 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30189 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hp0A/info/2hp0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hp0A/nostruct-align/2hp0A.t2k.a2m.gz, have 492636 columns in 2167 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bwkA/nostruct-align/2bwkA.t2k.a2m.gz
# 2bwkA.t2k.a2m with 464 sequences, total weight= 48.0654 avg weight= 0.103589 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bwkA/info/2bwkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bwkA/nostruct-align/2bwkA.t2k.a2m.gz, have 492753 columns in 2168 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rwiA/nostruct-align/1rwiA.t2k.a2m.gz
# 1rwiA.t2k.a2m with 1051 sequences, total weight= 1051 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.948514 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rwiA/info/1rwiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rwiA/nostruct-align/1rwiA.t2k.a2m.gz, have 493009 columns in 2169 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yj1A/nostruct-align/1yj1A.t2k.a2m.gz
# 1yj1A.t2k.a2m with 1511 sequences, total weight= 64.9986 avg weight= 0.0430169 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30318 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yj1A/info/1yj1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yj1A/nostruct-align/1yj1A.t2k.a2m.gz, have 493080 columns in 2170 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tqhA/nostruct-align/1tqhA.t2k.a2m.gz
# 1tqhA.t2k.a2m with 881 sequences, total weight= 881 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.894832 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tqhA/info/1tqhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tqhA/nostruct-align/1tqhA.t2k.a2m.gz, have 493322 columns in 2171 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u14A/nostruct-align/1u14A.t2k.a2m.gz
# 1u14A.t2k.a2m with 43 sequences, total weight= 12.9966 avg weight= 0.302246 32 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u14A/info/1u14A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1u14A/nostruct-align/1u14A.t2k.a2m.gz, have 493491 columns in 2172 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fdr/nostruct-align/1fdr.t2k.a2m.gz
# 1fdr.t2k.a2m with 362 sequences, total weight= 362 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26323 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fdr/info/1fdr.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fdr/nostruct-align/1fdr.t2k.a2m.gz, have 493735 columns in 2173 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xyiA/nostruct-align/1xyiA.t2k.a2m.gz
# 1xyiA.t2k.a2m with 19 sequences, total weight= 2.30489 avg weight= 0.12131 10 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xyiA/info/1xyiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xyiA/nostruct-align/1xyiA.t2k.a2m.gz, have 493801 columns in 2174 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zq6A/nostruct-align/1zq6A.t2k.a2m.gz
# 1zq6A.t2k.a2m with 1267 sequences, total weight= 68.2215 avg weight= 0.0538449 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30196 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zq6A/info/1zq6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zq6A/nostruct-align/1zq6A.t2k.a2m.gz, have 494133 columns in 2175 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ox0A/nostruct-align/1ox0A.t2k.a2m.gz
# 1ox0A.t2k.a2m with 1330 sequences, total weight= 520.353 avg weight= 0.391242 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31528 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ox0A/info/1ox0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1ox0A/nostruct-align/1ox0A.t2k.a2m.gz, have 494547 columns in 2176 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wc2A/nostruct-align/1wc2A.t2k.a2m.gz
# 1wc2A.t2k.a2m with 42 sequences, total weight= 15.6323 avg weight= 0.372197 23 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wc2A/info/1wc2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wc2A/nostruct-align/1wc2A.t2k.a2m.gz, have 494727 columns in 2177 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2t/2tpsA/nostruct-align/2tpsA.t2k.a2m.gz
# 2tpsA.t2k.a2m with 306 sequences, total weight= 306 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06424 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2t/2tpsA/info/2tpsA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2t/2tpsA/nostruct-align/2tpsA.t2k.a2m.gz, have 494953 columns in 2178 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2a65A/nostruct-align/2a65A.t2k.a2m.gz
# 2a65A.t2k.a2m with 804 sequences, total weight= 234.768 avg weight= 0.292 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30429 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2a65A/info/2a65A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2a65A/nostruct-align/2a65A.t2k.a2m.gz, have 495462 columns in 2179 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tmxA/nostruct-align/1tmxA.t2k.a2m.gz
# 1tmxA.t2k.a2m with 328 sequences, total weight= 61.4958 avg weight= 0.187487 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tmxA/info/1tmxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tmxA/nostruct-align/1tmxA.t2k.a2m.gz, have 495754 columns in 2180 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hzfA/nostruct-align/2hzfA.t2k.a2m.gz
# 2hzfA.t2k.a2m with 1027 sequences, total weight= 104.796 avg weight= 0.102041 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30074 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hzfA/info/2hzfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hzfA/nostruct-align/2hzfA.t2k.a2m.gz, have 495864 columns in 2181 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dbwA/nostruct-align/1dbwA.t2k.a2m.gz
# 1dbwA.t2k.a2m with 1954 sequences, total weight= 278.361 avg weight= 0.142457 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32333 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dbwA/info/1dbwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dbwA/nostruct-align/1dbwA.t2k.a2m.gz, have 495987 columns in 2182 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2o6pA/nostruct-align/2o6pA.t2k.a2m.gz
# 2o6pA.t2k.a2m with 153 sequences, total weight= 33.6089 avg weight= 0.219666 38 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2o6pA/info/2o6pA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2o6pA/nostruct-align/2o6pA.t2k.a2m.gz, have 496110 columns in 2183 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ia8A/nostruct-align/1ia8A.t2k.a2m.gz
# 1ia8A.t2k.a2m with 7225 sequences, total weight= 7225 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2142 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ia8A/info/1ia8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1ia8A/nostruct-align/1ia8A.t2k.a2m.gz, have 496382 columns in 2184 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jkxA/nostruct-align/1jkxA.t2k.a2m.gz
# 1jkxA.t2k.a2m with 542 sequences, total weight= 118.474 avg weight= 0.218587 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3022 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jkxA/info/1jkxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jkxA/nostruct-align/1jkxA.t2k.a2m.gz, have 496591 columns in 2185 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2ftrA/nostruct-align/2ftrA.t2k.a2m.gz
# 2ftrA.t2k.a2m with 42 sequences, total weight= 35.1664 avg weight= 0.837296 32 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2ftrA/info/2ftrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2ftrA/nostruct-align/2ftrA.t2k.a2m.gz, have 496694 columns in 2186 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qkrA/nostruct-align/1qkrA.t2k.a2m.gz
# 1qkrA.t2k.a2m with 75 sequences, total weight= 9.96222 avg weight= 0.13283 22 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qkrA/info/1qkrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qkrA/nostruct-align/1qkrA.t2k.a2m.gz, have 496875 columns in 2187 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1giqA/nostruct-align/1giqA.t2k.a2m.gz
# 1giqA.t2k.a2m with 34 sequences, total weight= 15.4235 avg weight= 0.453632 20 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1giqA/info/1giqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1giqA/nostruct-align/1giqA.t2k.a2m.gz, have 497286 columns in 2188 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ui0A/nostruct-align/1ui0A.t2k.a2m.gz
# 1ui0A.t2k.a2m with 160 sequences, total weight= 99.5009 avg weight= 0.621881 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ui0A/info/1ui0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1ui0A/nostruct-align/1ui0A.t2k.a2m.gz, have 497478 columns in 2189 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h6tA/nostruct-align/1h6tA.t2k.a2m.gz
# 1h6tA.t2k.a2m with 2348 sequences, total weight= 2348 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01103 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h6tA/info/1h6tA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h6tA/nostruct-align/1h6tA.t2k.a2m.gz, have 497769 columns in 2190 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g8kB/nostruct-align/1g8kB.t2k.a2m.gz
# 1g8kB.t2k.a2m with 303 sequences, total weight= 178.505 avg weight= 0.589126 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30051 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g8kB/info/1g8kB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1g8kB/nostruct-align/1g8kB.t2k.a2m.gz, have 497902 columns in 2191 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nooA/nostruct-align/2nooA.t2k.a2m.gz
# 2nooA.t2k.a2m with 3349 sequences, total weight= 3349 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02849 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nooA/info/2nooA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2n/2nooA/nostruct-align/2nooA.t2k.a2m.gz, have 498398 columns in 2192 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cnv/nostruct-align/1cnv.t2k.a2m.gz
# 1cnv.t2k.a2m with 180 sequences, total weight= 33.7554 avg weight= 0.18753 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cnv/info/1cnv.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1cnv/nostruct-align/1cnv.t2k.a2m.gz, have 498681 columns in 2193 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fcyA/nostruct-align/1fcyA.t2k.a2m.gz
# 1fcyA.t2k.a2m with 980 sequences, total weight= 980 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25953 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fcyA/info/1fcyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fcyA/nostruct-align/1fcyA.t2k.a2m.gz, have 498917 columns in 2194 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2b0jA/nostruct-align/2b0jA.t2k.a2m.gz
# 2b0jA.t2k.a2m with 157 sequences, total weight= 31.5861 avg weight= 0.201186 31 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2b0jA/info/2b0jA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2b0jA/nostruct-align/2b0jA.t2k.a2m.gz, have 499261 columns in 2195 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ifrA/nostruct-align/1ifrA.t2k.a2m.gz
# 1ifrA.t2k.a2m with 146 sequences, total weight= 23.3997 avg weight= 0.160272 41 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ifrA/info/1ifrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1ifrA/nostruct-align/1ifrA.t2k.a2m.gz, have 499374 columns in 2196 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2ci1A/nostruct-align/2ci1A.t2k.a2m.gz
# 2ci1A.t2k.a2m with 213 sequences, total weight= 139.45 avg weight= 0.654693 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3019 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2ci1A/info/2ci1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2ci1A/nostruct-align/2ci1A.t2k.a2m.gz, have 499649 columns in 2197 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u55A/nostruct-align/1u55A.t2k.a2m.gz
# 1u55A.t2k.a2m with 41 sequences, total weight= 29.8409 avg weight= 0.727827 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u55A/info/1u55A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1u55A/nostruct-align/1u55A.t2k.a2m.gz, have 499837 columns in 2198 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2dkoB/nostruct-align/2dkoB.t2k.a2m.gz
# 2dkoB.t2k.a2m with 427 sequences, total weight= 58.331 avg weight= 0.136607 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30037 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2dkoB/info/2dkoB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2dkoB/nostruct-align/2dkoB.t2k.a2m.gz, have 499940 columns in 2199 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cseI/nostruct-align/1cseI.t2k.a2m.gz
# 1cseI.t2k.a2m with 97 sequences, total weight= 9.67337 avg weight= 0.0997255 28 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cseI/info/1cseI.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1cseI/nostruct-align/1cseI.t2k.a2m.gz, have 500003 columns in 2200 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2o23A/nostruct-align/2o23A.t2k.a2m.gz
# 2o23A.t2k.a2m with 15761 sequences, total weight= 4199.25 avg weight= 0.266433 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.34357 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2o23A/info/2o23A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2o23A/nostruct-align/2o23A.t2k.a2m.gz, have 500251 columns in 2201 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f3uB/nostruct-align/1f3uB.t2k.a2m.gz
# 1f3uB.t2k.a2m with 19 sequences, total weight= 4.87658 avg weight= 0.256662 17 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f3uB/info/1f3uB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1f3uB/nostruct-align/1f3uB.t2k.a2m.gz, have 500390 columns in 2202 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tbfA/nostruct-align/1tbfA.t2k.a2m.gz
# 1tbfA.t2k.a2m with 465 sequences, total weight= 48.5817 avg weight= 0.104477 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3005 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tbfA/info/1tbfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tbfA/nostruct-align/1tbfA.t2k.a2m.gz, have 500716 columns in 2203 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xcrA/nostruct-align/1xcrA.t2k.a2m.gz
# 1xcrA.t2k.a2m with 35 sequences, total weight= 5.76676 avg weight= 0.164764 22 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xcrA/info/1xcrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xcrA/nostruct-align/1xcrA.t2k.a2m.gz, have 501029 columns in 2204 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f86A/nostruct-align/1f86A.t2k.a2m.gz
# 1f86A.t2k.a2m with 100 sequences, total weight= 8.9938 avg weight= 0.089938 30 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f86A/info/1f86A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1f86A/nostruct-align/1f86A.t2k.a2m.gz, have 501144 columns in 2205 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jfxA/nostruct-align/1jfxA.t2k.a2m.gz
# 1jfxA.t2k.a2m with 117 sequences, total weight= 117 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24146 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jfxA/info/1jfxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jfxA/nostruct-align/1jfxA.t2k.a2m.gz, have 501361 columns in 2206 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oboA/nostruct-align/1oboA.t2k.a2m.gz
# 1oboA.t2k.a2m with 259 sequences, total weight= 164.735 avg weight= 0.636044 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30143 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oboA/info/1oboA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oboA/nostruct-align/1oboA.t2k.a2m.gz, have 501530 columns in 2207 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xfjA/nostruct-align/1xfjA.t2k.a2m.gz
# 1xfjA.t2k.a2m with 185 sequences, total weight= 44.0693 avg weight= 0.238212 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xfjA/info/1xfjA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xfjA/nostruct-align/1xfjA.t2k.a2m.gz, have 501786 columns in 2208 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fomB/nostruct-align/2fomB.t2k.a2m.gz
# 2fomB.t2k.a2m with 578 sequences, total weight= 12.5178 avg weight= 0.0216571 32 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fomB/info/2fomB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fomB/nostruct-align/2fomB.t2k.a2m.gz, have 501936 columns in 2209 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qwnA/nostruct-align/1qwnA.t2k.a2m.gz
# 1qwnA.t2k.a2m with 156 sequences, total weight= 156 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25907 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qwnA/info/1qwnA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qwnA/nostruct-align/1qwnA.t2k.a2m.gz, have 502950 columns in 2210 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2giyA/nostruct-align/2giyA.t2k.a2m.gz
# 2giyA.t2k.a2m with 82 sequences, total weight= 26.4991 avg weight= 0.323159 35 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2giyA/info/2giyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2giyA/nostruct-align/2giyA.t2k.a2m.gz, have 503129 columns in 2211 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iuqA/nostruct-align/1iuqA.t2k.a2m.gz
# 1iuqA.t2k.a2m with 32 sequences, total weight= 8.1764 avg weight= 0.255513 19 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iuqA/info/1iuqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1iuqA/nostruct-align/1iuqA.t2k.a2m.gz, have 503486 columns in 2212 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bn3A/nostruct-align/2bn3A.t2k.a2m.gz
# 2bn3A.t2k.a2m with 110 sequences, total weight= 2.37049 avg weight= 0.0215499 16 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bn3A/info/2bn3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bn3A/nostruct-align/2bn3A.t2k.a2m.gz, have 503507 columns in 2213 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v2zA/nostruct-align/1v2zA.t2k.a2m.gz
# 1v2zA.t2k.a2m with 14 sequences, total weight= 3.50496 avg weight= 0.250354 16 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v2zA/info/1v2zA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v2zA/nostruct-align/1v2zA.t2k.a2m.gz, have 503613 columns in 2214 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hueC/nostruct-align/2hueC.t2k.a2m.gz
# 2hueC.t2k.a2m with 330 sequences, total weight= 11.4279 avg weight= 0.0346301 27 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hueC/info/2hueC.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hueC/nostruct-align/2hueC.t2k.a2m.gz, have 503695 columns in 2215 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2e/2eng/nostruct-align/2eng.t2k.a2m.gz
# 2eng.t2k.a2m with 46 sequences, total weight= 4.54815 avg weight= 0.0988729 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2e/2eng/info/2eng.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2e/2eng/nostruct-align/2eng.t2k.a2m.gz, have 503900 columns in 2216 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kafA/nostruct-align/1kafA.t2k.a2m.gz
# 1kafA.t2k.a2m with 7 sequences, total weight= 4.51124 avg weight= 0.644463 14 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kafA/info/1kafA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kafA/nostruct-align/1kafA.t2k.a2m.gz, have 504008 columns in 2217 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ogoX/nostruct-align/1ogoX.t2k.a2m.gz
# 1ogoX.t2k.a2m with 17 sequences, total weight= 7.30406 avg weight= 0.429651 17 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ogoX/info/1ogoX.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1ogoX/nostruct-align/1ogoX.t2k.a2m.gz, have 504580 columns in 2218 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2h2bA/nostruct-align/2h2bA.t2k.a2m.gz
# 2h2bA.t2k.a2m with 3236 sequences, total weight= 434.075 avg weight= 0.134139 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32892 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2h2bA/info/2h2bA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2h2bA/nostruct-align/2h2bA.t2k.a2m.gz, have 504687 columns in 2219 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q0rA/nostruct-align/1q0rA.t2k.a2m.gz
# 1q0rA.t2k.a2m with 1242 sequences, total weight= 1242 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.870923 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q0rA/info/1q0rA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1q0rA/nostruct-align/1q0rA.t2k.a2m.gz, have 504984 columns in 2220 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cz9A/nostruct-align/2cz9A.t2k.a2m.gz
# 2cz9A.t2k.a2m with 597 sequences, total weight= 597 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15836 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cz9A/info/2cz9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cz9A/nostruct-align/2cz9A.t2k.a2m.gz, have 505330 columns in 2221 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m70A/nostruct-align/1m70A.t2k.a2m.gz
# 1m70A.t2k.a2m with 362 sequences, total weight= 362 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15886 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m70A/info/1m70A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m70A/nostruct-align/1m70A.t2k.a2m.gz, have 505520 columns in 2222 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qg8A/nostruct-align/1qg8A.t2k.a2m.gz
# 1qg8A.t2k.a2m with 631 sequences, total weight= 631 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00664 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qg8A/info/1qg8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qg8A/nostruct-align/1qg8A.t2k.a2m.gz, have 505758 columns in 2223 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gu3A/nostruct-align/2gu3A.t2k.a2m.gz
# 2gu3A.t2k.a2m with 38 sequences, total weight= 22.6808 avg weight= 0.596863 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gu3A/info/2gu3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gu3A/nostruct-align/2gu3A.t2k.a2m.gz, have 505886 columns in 2224 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lq9A/nostruct-align/1lq9A.t2k.a2m.gz
# 1lq9A.t2k.a2m with 13 sequences, total weight= 11.1846 avg weight= 0.860353 15 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lq9A/info/1lq9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lq9A/nostruct-align/1lq9A.t2k.a2m.gz, have 505998 columns in 2225 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wrvA/nostruct-align/1wrvA.t2k.a2m.gz
# 1wrvA.t2k.a2m with 734 sequences, total weight= 261.119 avg weight= 0.355748 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31201 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wrvA/info/1wrvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wrvA/nostruct-align/1wrvA.t2k.a2m.gz, have 506295 columns in 2226 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zin/nostruct-align/1zin.t2k.a2m.gz
# 1zin.t2k.a2m with 343 sequences, total weight= 271.232 avg weight= 0.790765 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3016 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zin/info/1zin.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zin/nostruct-align/1zin.t2k.a2m.gz, have 506512 columns in 2227 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pz7A/nostruct-align/1pz7A.t2k.a2m.gz
# 1pz7A.t2k.a2m with 905 sequences, total weight= 905 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0412 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pz7A/info/1pz7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pz7A/nostruct-align/1pz7A.t2k.a2m.gz, have 506700 columns in 2228 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nt0A/nostruct-align/2nt0A.t2k.a2m.gz
# 2nt0A.t2k.a2m with 157 sequences, total weight= 157 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29013 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nt0A/info/2nt0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2n/2nt0A/nostruct-align/2nt0A.t2k.a2m.gz, have 507197 columns in 2229 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jhfA/nostruct-align/1jhfA.t2k.a2m.gz
# 1jhfA.t2k.a2m with 293 sequences, total weight= 175.281 avg weight= 0.59823 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30197 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jhfA/info/1jhfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jhfA/nostruct-align/1jhfA.t2k.a2m.gz, have 507394 columns in 2230 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s3eA/nostruct-align/1s3eA.t2k.a2m.gz
# 1s3eA.t2k.a2m with 4727 sequences, total weight= 4727 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.728983 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s3eA/info/1s3eA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1s3eA/nostruct-align/1s3eA.t2k.a2m.gz, have 507893 columns in 2231 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mla/nostruct-align/1mla.t2k.a2m.gz
# 1mla.t2k.a2m with 519 sequences, total weight= 186.686 avg weight= 0.359703 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3065 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mla/info/1mla.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mla/nostruct-align/1mla.t2k.a2m.gz, have 508198 columns in 2232 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wzzA/nostruct-align/1wzzA.t2k.a2m.gz
# 1wzzA.t2k.a2m with 147 sequences, total weight= 131.592 avg weight= 0.895185 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3003 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wzzA/info/1wzzA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wzzA/nostruct-align/1wzzA.t2k.a2m.gz, have 508517 columns in 2233 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2ousA/nostruct-align/2ousA.t2k.a2m.gz
# 2ousA.t2k.a2m with 983 sequences, total weight= 214.226 avg weight= 0.217931 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31252 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2ousA/info/2ousA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2ousA/nostruct-align/2ousA.t2k.a2m.gz, have 508843 columns in 2234 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f9vA/nostruct-align/1f9vA.t2k.a2m.gz
# 1f9vA.t2k.a2m with 589 sequences, total weight= 31.4502 avg weight= 0.0533959 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f9vA/info/1f9vA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1f9vA/nostruct-align/1f9vA.t2k.a2m.gz, have 509156 columns in 2235 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n8kA/nostruct-align/1n8kA.t2k.a2m.gz
# 1n8kA.t2k.a2m with 2027 sequences, total weight= 2027 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28057 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n8kA/info/1n8kA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1n8kA/nostruct-align/1n8kA.t2k.a2m.gz, have 509530 columns in 2236 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2oo6A/nostruct-align/2oo6A.t2k.a2m.gz
# 2oo6A.t2k.a2m with 1003 sequences, total weight= 1003 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22165 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2oo6A/info/2oo6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2oo6A/nostruct-align/2oo6A.t2k.a2m.gz, have 509923 columns in 2237 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jx4A/nostruct-align/1jx4A.t2k.a2m.gz
# 1jx4A.t2k.a2m with 342 sequences, total weight= 104.476 avg weight= 0.305487 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30295 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jx4A/info/1jx4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jx4A/nostruct-align/1jx4A.t2k.a2m.gz, have 510264 columns in 2238 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fujA/nostruct-align/2fujA.t2k.a2m.gz
# 2fujA.t2k.a2m with 953 sequences, total weight= 953 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13141 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fujA/info/2fujA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fujA/nostruct-align/2fujA.t2k.a2m.gz, have 510382 columns in 2239 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wucA/nostruct-align/1wucA.t2k.a2m.gz
# 1wucA.t2k.a2m with 252 sequences, total weight= 53.1834 avg weight= 0.211045 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30034 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wucA/info/1wucA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wucA/nostruct-align/1wucA.t2k.a2m.gz, have 510630 columns in 2240 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q3oA/nostruct-align/1q3oA.t2k.a2m.gz
# 1q3oA.t2k.a2m with 1657 sequences, total weight= 434.785 avg weight= 0.262393 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31929 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q3oA/info/1q3oA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1q3oA/nostruct-align/1q3oA.t2k.a2m.gz, have 510734 columns in 2241 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1euvA/nostruct-align/1euvA.t2k.a2m.gz
# 1euvA.t2k.a2m with 263 sequences, total weight= 263 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24795 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1euvA/info/1euvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1euvA/nostruct-align/1euvA.t2k.a2m.gz, have 510955 columns in 2242 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kqrA/nostruct-align/1kqrA.t2k.a2m.gz
# 1kqrA.t2k.a2m with 312 sequences, total weight= 7.37902 avg weight= 0.0236507 29 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kqrA/info/1kqrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kqrA/nostruct-align/1kqrA.t2k.a2m.gz, have 511115 columns in 2243 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bwvA/nostruct-align/2bwvA.t2k.a2m.gz
# 2bwvA.t2k.a2m with 1960 sequences, total weight= 1960 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05915 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bwvA/info/2bwvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bwvA/nostruct-align/2bwvA.t2k.a2m.gz, have 511555 columns in 2244 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d3gA/nostruct-align/1d3gA.t2k.a2m.gz
# 1d3gA.t2k.a2m with 445 sequences, total weight= 445 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26478 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d3gA/info/1d3gA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1d3gA/nostruct-align/1d3gA.t2k.a2m.gz, have 511915 columns in 2245 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2g6yA/nostruct-align/2g6yA.t2k.a2m.gz
# 2g6yA.t2k.a2m with 457 sequences, total weight= 15.0379 avg weight= 0.0329056 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2g6yA/info/2g6yA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2g6yA/nostruct-align/2g6yA.t2k.a2m.gz, have 512128 columns in 2246 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bjvA/nostruct-align/2bjvA.t2k.a2m.gz
# 2bjvA.t2k.a2m with 2193 sequences, total weight= 472.614 avg weight= 0.21551 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32416 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bjvA/info/2bjvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bjvA/nostruct-align/2bjvA.t2k.a2m.gz, have 512364 columns in 2247 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wmaA/nostruct-align/1wmaA.t2k.a2m.gz
# 1wmaA.t2k.a2m with 7323 sequences, total weight= 7323 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23347 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wmaA/info/1wmaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wmaA/nostruct-align/1wmaA.t2k.a2m.gz, have 512639 columns in 2248 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xeoA/nostruct-align/1xeoA.t2k.a2m.gz
# 1xeoA.t2k.a2m with 425 sequences, total weight= 32.8287 avg weight= 0.0772439 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xeoA/info/1xeoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xeoA/nostruct-align/1xeoA.t2k.a2m.gz, have 512804 columns in 2249 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2iqgA/nostruct-align/2iqgA.t2k.a2m.gz
# 2iqgA.t2k.a2m with 1447 sequences, total weight= 1447 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22517 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2iqgA/info/2iqgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2iqgA/nostruct-align/2iqgA.t2k.a2m.gz, have 513179 columns in 2250 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1z2uA/nostruct-align/1z2uA.t2k.a2m.gz
# 1z2uA.t2k.a2m with 1356 sequences, total weight= 95.017 avg weight= 0.0700715 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30373 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1z2uA/info/1z2uA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1z2uA/nostruct-align/1z2uA.t2k.a2m.gz, have 513329 columns in 2251 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jy2N/nostruct-align/1jy2N.t2k.a2m.gz
# 1jy2N.t2k.a2m with 28 sequences, total weight= 3.09939 avg weight= 0.110692 17 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jy2N/info/1jy2N.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jy2N/nostruct-align/1jy2N.t2k.a2m.gz, have 513372 columns in 2252 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2oikA/nostruct-align/2oikA.t2k.a2m.gz
# 2oikA.t2k.a2m with 599 sequences, total weight= 599 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29825 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2oikA/info/2oikA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2oikA/nostruct-align/2oikA.t2k.a2m.gz, have 513511 columns in 2253 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rybA/nostruct-align/1rybA.t2k.a2m.gz
# 1rybA.t2k.a2m with 188 sequences, total weight= 19.5219 avg weight= 0.10384 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rybA/info/1rybA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rybA/nostruct-align/1rybA.t2k.a2m.gz, have 513697 columns in 2254 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2b4vA/nostruct-align/2b4vA.t2k.a2m.gz
# 2b4vA.t2k.a2m with 212 sequences, total weight= 212 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08876 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2b4vA/info/2b4vA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2b4vA/nostruct-align/2b4vA.t2k.a2m.gz, have 514134 columns in 2255 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2ia7A/nostruct-align/2ia7A.t2k.a2m.gz
# 2ia7A.t2k.a2m with 180 sequences, total weight= 96.0434 avg weight= 0.533574 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30048 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2ia7A/info/2ia7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2ia7A/nostruct-align/2ia7A.t2k.a2m.gz, have 514245 columns in 2256 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2f5xA/nostruct-align/2f5xA.t2k.a2m.gz
# 2f5xA.t2k.a2m with 1068 sequences, total weight= 70.663 avg weight= 0.0661639 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30407 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2f5xA/info/2f5xA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2f5xA/nostruct-align/2f5xA.t2k.a2m.gz, have 514544 columns in 2257 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1goiA/nostruct-align/1goiA.t2k.a2m.gz
# 1goiA.t2k.a2m with 443 sequences, total weight= 443 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2566 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1goiA/info/1goiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1goiA/nostruct-align/1goiA.t2k.a2m.gz, have 515040 columns in 2258 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2o9uX/nostruct-align/2o9uX.t2k.a2m.gz
# 2o9uX.t2k.a2m with 13 sequences, total weight= 2.38317 avg weight= 0.183321 8 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2o9uX/info/2o9uX.stride-mixed.strand_sep
WARNING: skipping r, since it is lower case.
# After reading /projects/compbio/experiments/models.97/pdb/2o/2o9uX/nostruct-align/2o9uX.t2k.a2m.gz, have 515135 columns in 2259 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2p/2p2sA/nostruct-align/2p2sA.t2k.a2m.gz
# 2p2sA.t2k.a2m with 1617 sequences, total weight= 1617 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02658 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2p/2p2sA/info/2p2sA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2p/2p2sA/nostruct-align/2p2sA.t2k.a2m.gz, have 515468 columns in 2260 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2npnA/nostruct-align/2npnA.t2k.a2m.gz
# 2npnA.t2k.a2m with 1023 sequences, total weight= 1023 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24551 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2npnA/info/2npnA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2n/2npnA/nostruct-align/2npnA.t2k.a2m.gz, have 515706 columns in 2261 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l8bA/nostruct-align/1l8bA.t2k.a2m.gz
# 1l8bA.t2k.a2m with 123 sequences, total weight= 28.9215 avg weight= 0.235134 42 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l8bA/info/1l8bA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1l8bA/nostruct-align/1l8bA.t2k.a2m.gz, have 515883 columns in 2262 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2b9eA/nostruct-align/2b9eA.t2k.a2m.gz
# 2b9eA.t2k.a2m with 997 sequences, total weight= 997 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2026 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2b9eA/info/2b9eA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2b9eA/nostruct-align/2b9eA.t2k.a2m.gz, have 516158 columns in 2263 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1go3F/nostruct-align/1go3F.t2k.a2m.gz
# 1go3F.t2k.a2m with 20 sequences, total weight= 13.3719 avg weight= 0.668593 23 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1go3F/info/1go3F.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1go3F/nostruct-align/1go3F.t2k.a2m.gz, have 516265 columns in 2264 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2blnA/nostruct-align/2blnA.t2k.a2m.gz
# 2blnA.t2k.a2m with 934 sequences, total weight= 513.71 avg weight= 0.55001 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30998 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2blnA/info/2blnA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2blnA/nostruct-align/2blnA.t2k.a2m.gz, have 516563 columns in 2265 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rcqA/nostruct-align/1rcqA.t2k.a2m.gz
# 1rcqA.t2k.a2m with 291 sequences, total weight= 54.0551 avg weight= 0.185756 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30036 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rcqA/info/1rcqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rcqA/nostruct-align/1rcqA.t2k.a2m.gz, have 516920 columns in 2266 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2ddrA/nostruct-align/2ddrA.t2k.a2m.gz
# 2ddrA.t2k.a2m with 164 sequences, total weight= 164 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02451 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2ddrA/info/2ddrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2ddrA/nostruct-align/2ddrA.t2k.a2m.gz, have 517208 columns in 2267 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e5kA/nostruct-align/1e5kA.t2k.a2m.gz
# 1e5kA.t2k.a2m with 320 sequences, total weight= 320 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07849 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e5kA/info/1e5kA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1e5kA/nostruct-align/1e5kA.t2k.a2m.gz, have 517396 columns in 2268 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kp6A/nostruct-align/1kp6A.t2k.a2m.gz
# 1kp6A.t2k.a2m with 6 sequences, total weight= 1.71688 avg weight= 0.286147 6 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kp6A/info/1kp6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kp6A/nostruct-align/1kp6A.t2k.a2m.gz, have 517475 columns in 2269 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eajA/nostruct-align/1eajA.t2k.a2m.gz
# 1eajA.t2k.a2m with 6690 sequences, total weight= 6690 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28052 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eajA/info/1eajA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1eajA/nostruct-align/1eajA.t2k.a2m.gz, have 517599 columns in 2270 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54J/nostruct-align/1v54J.t2k.a2m.gz
# 1v54J.t2k.a2m with 39 sequences, total weight= 5.20626 avg weight= 0.133494 19 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54J/info/1v54J.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v54J/nostruct-align/1v54J.t2k.a2m.gz, have 517657 columns in 2271 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2dvtA/nostruct-align/2dvtA.t2k.a2m.gz
# 2dvtA.t2k.a2m with 436 sequences, total weight= 436 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.994905 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2dvtA/info/2dvtA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2dvtA/nostruct-align/2dvtA.t2k.a2m.gz, have 517982 columns in 2272 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2citA/nostruct-align/2citA.t2k.a2m.gz
# 2citA.t2k.a2m with 113 sequences, total weight= 113 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03993 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2citA/info/2citA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2citA/nostruct-align/2citA.t2k.a2m.gz, have 518256 columns in 2273 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2a2cA/nostruct-align/2a2cA.t2k.a2m.gz
# 2a2cA.t2k.a2m with 493 sequences, total weight= 493 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04646 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2a2cA/info/2a2cA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2a2cA/nostruct-align/2a2cA.t2k.a2m.gz, have 518702 columns in 2274 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2iayA/nostruct-align/2iayA.t2k.a2m.gz
# 2iayA.t2k.a2m with 29 sequences, total weight= 6.74181 avg weight= 0.232476 24 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2iayA/info/2iayA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2iayA/nostruct-align/2iayA.t2k.a2m.gz, have 518816 columns in 2275 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pe9A/nostruct-align/1pe9A.t2k.a2m.gz
# 1pe9A.t2k.a2m with 235 sequences, total weight= 83.3932 avg weight= 0.354865 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30044 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pe9A/info/1pe9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pe9A/nostruct-align/1pe9A.t2k.a2m.gz, have 519177 columns in 2276 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54K/nostruct-align/1v54K.t2k.a2m.gz
# 1v54K.t2k.a2m with 29 sequences, total weight= 3.02459 avg weight= 0.104296 17 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54K/info/1v54K.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v54K/nostruct-align/1v54K.t2k.a2m.gz, have 519226 columns in 2277 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bdrA/nostruct-align/2bdrA.t2k.a2m.gz
# 2bdrA.t2k.a2m with 94 sequences, total weight= 38.5177 avg weight= 0.409763 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bdrA/info/2bdrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bdrA/nostruct-align/2bdrA.t2k.a2m.gz, have 519392 columns in 2278 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2iccA/nostruct-align/2iccA.t2k.a2m.gz
# 2iccA.t2k.a2m with 2177 sequences, total weight= 2177 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05153 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2iccA/info/2iccA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2iccA/nostruct-align/2iccA.t2k.a2m.gz, have 519511 columns in 2279 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ucdA/nostruct-align/1ucdA.t2k.a2m.gz
# 1ucdA.t2k.a2m with 594 sequences, total weight= 129.301 avg weight= 0.217679 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30407 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ucdA/info/1ucdA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1ucdA/nostruct-align/1ucdA.t2k.a2m.gz, have 519701 columns in 2280 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uxy/nostruct-align/1uxy.t2k.a2m.gz
# 1uxy.t2k.a2m with 162 sequences, total weight= 32.5859 avg weight= 0.201148 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uxy/info/1uxy.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uxy/nostruct-align/1uxy.t2k.a2m.gz, have 520041 columns in 2281 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wy3A/nostruct-align/1wy3A.t2k.a2m.gz
# 1wy3A.t2k.a2m with 31 sequences, total weight= 3.46074 avg weight= 0.111637 18 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wy3A/info/1wy3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wy3A/nostruct-align/1wy3A.t2k.a2m.gz, have 520076 columns in 2282 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nrwA/nostruct-align/1nrwA.t2k.a2m.gz
# 1nrwA.t2k.a2m with 1280 sequences, total weight= 1280 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.972869 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nrwA/info/1nrwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nrwA/nostruct-align/1nrwA.t2k.a2m.gz, have 520361 columns in 2283 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w99A/nostruct-align/1w99A.t2k.a2m.gz
# 1w99A.t2k.a2m with 237 sequences, total weight= 138.532 avg weight= 0.584523 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30163 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w99A/info/1w99A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w99A/nostruct-align/1w99A.t2k.a2m.gz, have 520919 columns in 2284 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xszA/nostruct-align/1xszA.t2k.a2m.gz
# 1xszA.t2k.a2m with 317 sequences, total weight= 116.304 avg weight= 0.366889 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xszA/info/1xszA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xszA/nostruct-align/1xszA.t2k.a2m.gz, have 521275 columns in 2285 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2opcA/nostruct-align/2opcA.t2k.a2m.gz
# 2opcA.t2k.a2m with 13 sequences, total weight= 2.09355 avg weight= 0.161042 9 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2opcA/info/2opcA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2opcA/nostruct-align/2opcA.t2k.a2m.gz, have 521390 columns in 2286 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2ffyA/nostruct-align/2ffyA.t2k.a2m.gz
# 2ffyA.t2k.a2m with 1371 sequences, total weight= 1371 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04559 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2ffyA/info/2ffyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2ffyA/nostruct-align/2ffyA.t2k.a2m.gz, have 521748 columns in 2287 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fxoA/nostruct-align/1fxoA.t2k.a2m.gz
# 1fxoA.t2k.a2m with 633 sequences, total weight= 633 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26234 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fxoA/info/1fxoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fxoA/nostruct-align/1fxoA.t2k.a2m.gz, have 522040 columns in 2288 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zgkA/nostruct-align/1zgkA.t2k.a2m.gz
# 1zgkA.t2k.a2m with 1848 sequences, total weight= 1848 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.995961 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zgkA/info/1zgkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zgkA/nostruct-align/1zgkA.t2k.a2m.gz, have 522328 columns in 2289 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xjuA/nostruct-align/1xjuA.t2k.a2m.gz
# 1xjuA.t2k.a2m with 105 sequences, total weight= 26.8379 avg weight= 0.255599 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xjuA/info/1xjuA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xjuA/nostruct-align/1xjuA.t2k.a2m.gz, have 522484 columns in 2290 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2j3xA/nostruct-align/2j3xA.t2k.a2m.gz
# 2j3xA.t2k.a2m with 23 sequences, total weight= 15.2837 avg weight= 0.66451 18 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2j3xA/info/2j3xA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2j3xA/nostruct-align/2j3xA.t2k.a2m.gz, have 522914 columns in 2291 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2c1iA/nostruct-align/2c1iA.t2k.a2m.gz
# 2c1iA.t2k.a2m with 792 sequences, total weight= 792 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12169 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2c1iA/info/2c1iA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2c1iA/nostruct-align/2c1iA.t2k.a2m.gz, have 523297 columns in 2292 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1et1A/nostruct-align/1et1A.t2k.a2m.gz
# 1et1A.t2k.a2m with 26 sequences, total weight= 2.33501 avg weight= 0.0898079 10 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1et1A/info/1et1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1et1A/nostruct-align/1et1A.t2k.a2m.gz, have 523331 columns in 2293 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2b97A/nostruct-align/2b97A.t2k.a2m.gz
# 2b97A.t2k.a2m with 32 sequences, total weight= 4.51303 avg weight= 0.141032 23 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2b97A/info/2b97A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2b97A/nostruct-align/2b97A.t2k.a2m.gz, have 523401 columns in 2294 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jigA/nostruct-align/1jigA.t2k.a2m.gz
# 1jigA.t2k.a2m with 276 sequences, total weight= 102.263 avg weight= 0.370517 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30209 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jigA/info/1jigA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jigA/nostruct-align/1jigA.t2k.a2m.gz, have 523547 columns in 2295 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2aq6A/nostruct-align/2aq6A.t2k.a2m.gz
# 2aq6A.t2k.a2m with 128 sequences, total weight= 128 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19907 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2aq6A/info/2aq6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2aq6A/nostruct-align/2aq6A.t2k.a2m.gz, have 523690 columns in 2296 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iibA/nostruct-align/1iibA.t2k.a2m.gz
# 1iibA.t2k.a2m with 95 sequences, total weight= 14.1895 avg weight= 0.149363 35 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iibA/info/1iibA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1iibA/nostruct-align/1iibA.t2k.a2m.gz, have 523793 columns in 2297 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1suuA/nostruct-align/1suuA.t2k.a2m.gz
# 1suuA.t2k.a2m with 413 sequences, total weight= 75.8009 avg weight= 0.183537 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3019 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1suuA/info/1suuA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1suuA/nostruct-align/1suuA.t2k.a2m.gz, have 524086 columns in 2298 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i0vA/nostruct-align/1i0vA.t2k.a2m.gz
# 1i0vA.t2k.a2m with 60 sequences, total weight= 4.02967 avg weight= 0.0671612 19 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i0vA/info/1i0vA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1i0vA/nostruct-align/1i0vA.t2k.a2m.gz, have 524190 columns in 2299 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gyxA/nostruct-align/1gyxA.t2k.a2m.gz
# 1gyxA.t2k.a2m with 28 sequences, total weight= 8.48448 avg weight= 0.303017 24 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gyxA/info/1gyxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gyxA/nostruct-align/1gyxA.t2k.a2m.gz, have 524266 columns in 2300 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hfoA/nostruct-align/1hfoA.t2k.a2m.gz
# 1hfoA.t2k.a2m with 85 sequences, total weight= 20.1732 avg weight= 0.237331 35 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hfoA/info/1hfoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hfoA/nostruct-align/1hfoA.t2k.a2m.gz, have 524379 columns in 2301 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2e/2evbA/nostruct-align/2evbA.t2k.a2m.gz
# 2evbA.t2k.a2m with 2085 sequences, total weight= 41.4323 avg weight= 0.0198716 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30036 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2e/2evbA/info/2evbA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2e/2evbA/nostruct-align/2evbA.t2k.a2m.gz, have 524453 columns in 2302 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gmqA/nostruct-align/2gmqA.t2k.a2m.gz
# 2gmqA.t2k.a2m with 8 sequences, total weight= 2.64419 avg weight= 0.330524 10 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gmqA/info/2gmqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gmqA/nostruct-align/2gmqA.t2k.a2m.gz, have 524552 columns in 2303 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g1tA/nostruct-align/1g1tA.t2k.a2m.gz
# 1g1tA.t2k.a2m with 1082 sequences, total weight= 1082 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06694 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g1tA/info/1g1tA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1g1tA/nostruct-align/1g1tA.t2k.a2m.gz, have 524709 columns in 2304 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/6r/6rlxA/nostruct-align/6rlxA.t2k.a2m.gz
# 6rlxA.t2k.a2m with 6 sequences, total weight= 1.65626 avg weight= 0.276043 7 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/6r/6rlxA/info/6rlxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/6r/6rlxA/nostruct-align/6rlxA.t2k.a2m.gz, have 524733 columns in 2305 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pch/nostruct-align/1pch.t2k.a2m.gz
# 1pch.t2k.a2m with 228 sequences, total weight= 22.287 avg weight= 0.09775 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pch/info/1pch.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pch/nostruct-align/1pch.t2k.a2m.gz, have 524821 columns in 2306 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1aie/nostruct-align/1aie.t2k.a2m.gz
# 1aie.t2k.a2m with 81 sequences, total weight= 3.26331 avg weight= 0.0402878 17 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1aie/info/1aie.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1aie/nostruct-align/1aie.t2k.a2m.gz, have 524852 columns in 2307 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c7sA/nostruct-align/1c7sA.t2k.a2m.gz
# 1c7sA.t2k.a2m with 166 sequences, total weight= 129.986 avg weight= 0.783049 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c7sA/info/1c7sA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1c7sA/nostruct-align/1c7sA.t2k.a2m.gz, have 525710 columns in 2308 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bjfA/nostruct-align/2bjfA.t2k.a2m.gz
# 2bjfA.t2k.a2m with 110 sequences, total weight= 45.0734 avg weight= 0.409758 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bjfA/info/2bjfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bjfA/nostruct-align/2bjfA.t2k.a2m.gz, have 526038 columns in 2309 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y81A/nostruct-align/1y81A.t2k.a2m.gz
# 1y81A.t2k.a2m with 320 sequences, total weight= 48.7283 avg weight= 0.152276 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y81A/info/1y81A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1y81A/nostruct-align/1y81A.t2k.a2m.gz, have 526154 columns in 2310 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eyhA/nostruct-align/1eyhA.t2k.a2m.gz
# 1eyhA.t2k.a2m with 104 sequences, total weight= 22.0865 avg weight= 0.21237 36 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eyhA/info/1eyhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1eyhA/nostruct-align/1eyhA.t2k.a2m.gz, have 526298 columns in 2311 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rxyA/nostruct-align/1rxyA.t2k.a2m.gz
# 1rxyA.t2k.a2m with 410 sequences, total weight= 233.974 avg weight= 0.570668 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30417 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rxyA/info/1rxyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rxyA/nostruct-align/1rxyA.t2k.a2m.gz, have 526548 columns in 2312 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1ks9A/nostruct-align/1ks9A.t2k.a2m.gz
# 1ks9A.t2k.a2m with 175 sequences, total weight= 175 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19454 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1ks9A/info/1ks9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1ks9A/nostruct-align/1ks9A.t2k.a2m.gz, have 526839 columns in 2313 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mfmA/nostruct-align/1mfmA.t2k.a2m.gz
# 1mfmA.t2k.a2m with 371 sequences, total weight= 21.0802 avg weight= 0.0568198 42 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mfmA/info/1mfmA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mfmA/nostruct-align/1mfmA.t2k.a2m.gz, have 526992 columns in 2314 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vns/nostruct-align/1vns.t2k.a2m.gz
# 1vns.t2k.a2m with 19 sequences, total weight= 9.84134 avg weight= 0.517965 16 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vns/info/1vns.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vns/nostruct-align/1vns.t2k.a2m.gz, have 527566 columns in 2315 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hlcA/nostruct-align/2hlcA.t2k.a2m.gz
# 2hlcA.t2k.a2m with 1591 sequences, total weight= 201.907 avg weight= 0.126906 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32242 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hlcA/info/2hlcA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hlcA/nostruct-align/2hlcA.t2k.a2m.gz, have 527796 columns in 2316 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2if6A/nostruct-align/2if6A.t2k.a2m.gz
# 2if6A.t2k.a2m with 128 sequences, total weight= 128 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23175 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2if6A/info/2if6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2if6A/nostruct-align/2if6A.t2k.a2m.gz, have 527978 columns in 2317 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vhuA/nostruct-align/1vhuA.t2k.a2m.gz
# 1vhuA.t2k.a2m with 301 sequences, total weight= 81.2341 avg weight= 0.269881 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30061 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vhuA/info/1vhuA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vhuA/nostruct-align/1vhuA.t2k.a2m.gz, have 528170 columns in 2318 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/5n/5nul/nostruct-align/5nul.t2k.a2m.gz
# 5nul.t2k.a2m with 358 sequences, total weight= 358 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22062 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/5n/5nul/info/5nul.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/5n/5nul/nostruct-align/5nul.t2k.a2m.gz, have 528308 columns in 2319 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ra9/nostruct-align/1ra9.t2k.a2m.gz
# 1ra9.t2k.a2m with 395 sequences, total weight= 42.1156 avg weight= 0.106622 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30037 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ra9/info/1ra9.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1ra9/nostruct-align/1ra9.t2k.a2m.gz, have 528467 columns in 2320 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2i02A/nostruct-align/2i02A.t2k.a2m.gz
# 2i02A.t2k.a2m with 190 sequences, total weight= 190 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27911 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2i02A/info/2i02A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2i02A/nostruct-align/2i02A.t2k.a2m.gz, have 528607 columns in 2321 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jm0A/nostruct-align/1jm0A.t2k.a2m.gz
# 1jm0A.t2k.a2m with 9 sequences, total weight= 2.23522 avg weight= 0.248358 8 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jm0A/info/1jm0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jm0A/nostruct-align/1jm0A.t2k.a2m.gz, have 528655 columns in 2322 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p9iA/nostruct-align/1p9iA.t2k.a2m.gz
# 1p9iA.t2k.a2m with 2 sequences, total weight= 1.97569 avg weight= 0.987845 5 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p9iA/info/1p9iA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1p9iA/nostruct-align/1p9iA.t2k.a2m.gz, have 528684 columns in 2323 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gxuA/nostruct-align/1gxuA.t2k.a2m.gz
# 1gxuA.t2k.a2m with 195 sequences, total weight= 35.4581 avg weight= 0.181836 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gxuA/info/1gxuA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gxuA/nostruct-align/1gxuA.t2k.a2m.gz, have 528772 columns in 2324 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fiuA/nostruct-align/1fiuA.t2k.a2m.gz
# 1fiuA.t2k.a2m with 11 sequences, total weight= 3.96615 avg weight= 0.360559 16 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fiuA/info/1fiuA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fiuA/nostruct-align/1fiuA.t2k.a2m.gz, have 529058 columns in 2325 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k0iA/nostruct-align/1k0iA.t2k.a2m.gz
# 1k0iA.t2k.a2m with 554 sequences, total weight= 554 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.905308 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k0iA/info/1k0iA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1k0iA/nostruct-align/1k0iA.t2k.a2m.gz, have 529452 columns in 2326 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lr7A/nostruct-align/1lr7A.t2k.a2m.gz
# 1lr7A.t2k.a2m with 504 sequences, total weight= 91.7845 avg weight= 0.182112 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30361 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lr7A/info/1lr7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lr7A/nostruct-align/1lr7A.t2k.a2m.gz, have 529525 columns in 2327 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pfvA/nostruct-align/1pfvA.t2k.a2m.gz
# 1pfvA.t2k.a2m with 1245 sequences, total weight= 1245 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22593 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pfvA/info/1pfvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pfvA/nostruct-align/1pfvA.t2k.a2m.gz, have 530072 columns in 2328 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2f1kA/nostruct-align/2f1kA.t2k.a2m.gz
# 2f1kA.t2k.a2m with 1593 sequences, total weight= 1593 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0343 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2f1kA/info/2f1kA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2f1kA/nostruct-align/2f1kA.t2k.a2m.gz, have 530351 columns in 2329 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zt3A/nostruct-align/1zt3A.t2k.a2m.gz
# 1zt3A.t2k.a2m with 393 sequences, total weight= 36.9055 avg weight= 0.0939071 45 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zt3A/info/1zt3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zt3A/nostruct-align/1zt3A.t2k.a2m.gz, have 530431 columns in 2330 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1csh/nostruct-align/1csh.t2k.a2m.gz
# 1csh.t2k.a2m with 311 sequences, total weight= 34.3337 avg weight= 0.110398 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1csh/info/1csh.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1csh/nostruct-align/1csh.t2k.a2m.gz, have 530866 columns in 2331 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oh4A/nostruct-align/1oh4A.t2k.a2m.gz
# 1oh4A.t2k.a2m with 13 sequences, total weight= 7.79847 avg weight= 0.599883 16 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oh4A/info/1oh4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oh4A/nostruct-align/1oh4A.t2k.a2m.gz, have 531040 columns in 2332 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t1jA/nostruct-align/1t1jA.t2k.a2m.gz
# 1t1jA.t2k.a2m with 9 sequences, total weight= 3.89507 avg weight= 0.432786 12 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t1jA/info/1t1jA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1t1jA/nostruct-align/1t1jA.t2k.a2m.gz, have 531159 columns in 2333 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1z3eA/nostruct-align/1z3eA.t2k.a2m.gz
# 1z3eA.t2k.a2m with 605 sequences, total weight= 83.1481 avg weight= 0.137435 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30208 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1z3eA/info/1z3eA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1z3eA/nostruct-align/1z3eA.t2k.a2m.gz, have 531278 columns in 2334 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1thfD/nostruct-align/1thfD.t2k.a2m.gz
# 1thfD.t2k.a2m with 617 sequences, total weight= 445.646 avg weight= 0.722278 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30358 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1thfD/info/1thfD.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1thfD/nostruct-align/1thfD.t2k.a2m.gz, have 531531 columns in 2335 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2h30A/nostruct-align/2h30A.t2k.a2m.gz
# 2h30A.t2k.a2m with 2306 sequences, total weight= 2306 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.181 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2h30A/info/2h30A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2h30A/nostruct-align/2h30A.t2k.a2m.gz, have 531682 columns in 2336 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y55X/nostruct-align/1y55X.t2k.a2m.gz
# 1y55X.t2k.a2m with 96 sequences, total weight= 11.7613 avg weight= 0.122513 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y55X/info/1y55X.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1y55X/nostruct-align/1y55X.t2k.a2m.gz, have 531802 columns in 2337 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d2nA/nostruct-align/1d2nA.t2k.a2m.gz
# 1d2nA.t2k.a2m with 949 sequences, total weight= 755.13 avg weight= 0.795711 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3034 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d2nA/info/1d2nA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1d2nA/nostruct-align/1d2nA.t2k.a2m.gz, have 532048 columns in 2338 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yd9A/nostruct-align/1yd9A.t2k.a2m.gz
# 1yd9A.t2k.a2m with 492 sequences, total weight= 112.952 avg weight= 0.229577 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30127 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yd9A/info/1yd9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yd9A/nostruct-align/1yd9A.t2k.a2m.gz, have 532236 columns in 2339 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ogqA/nostruct-align/1ogqA.t2k.a2m.gz
# 1ogqA.t2k.a2m with 3554 sequences, total weight= 3554 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05103 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ogqA/info/1ogqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1ogqA/nostruct-align/1ogqA.t2k.a2m.gz, have 532549 columns in 2340 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v6sA/nostruct-align/1v6sA.t2k.a2m.gz
# 1v6sA.t2k.a2m with 411 sequences, total weight= 14.3944 avg weight= 0.0350228 39 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v6sA/info/1v6sA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v6sA/nostruct-align/1v6sA.t2k.a2m.gz, have 532939 columns in 2341 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t6uA/nostruct-align/1t6uA.t2k.a2m.gz
# 1t6uA.t2k.a2m with 11 sequences, total weight= 3.02412 avg weight= 0.27492 13 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t6uA/info/1t6uA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1t6uA/nostruct-align/1t6uA.t2k.a2m.gz, have 533056 columns in 2342 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2ip2A/nostruct-align/2ip2A.t2k.a2m.gz
# 2ip2A.t2k.a2m with 1218 sequences, total weight= 1218 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04315 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2ip2A/info/2ip2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2ip2A/nostruct-align/2ip2A.t2k.a2m.gz, have 533386 columns in 2343 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ekqA/nostruct-align/1ekqA.t2k.a2m.gz
# 1ekqA.t2k.a2m with 192 sequences, total weight= 134.542 avg weight= 0.700737 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30039 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ekqA/info/1ekqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1ekqA/nostruct-align/1ekqA.t2k.a2m.gz, have 533640 columns in 2344 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1njhA/nostruct-align/1njhA.t2k.a2m.gz
# 1njhA.t2k.a2m with 33 sequences, total weight= 3.56251 avg weight= 0.107955 20 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1njhA/info/1njhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1njhA/nostruct-align/1njhA.t2k.a2m.gz, have 533748 columns in 2345 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w4sA/nostruct-align/1w4sA.t2k.a2m.gz
# 1w4sA.t2k.a2m with 299 sequences, total weight= 299 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27896 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w4sA/info/1w4sA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w4sA/nostruct-align/1w4sA.t2k.a2m.gz, have 533894 columns in 2346 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2oitA/nostruct-align/2oitA.t2k.a2m.gz
# 2oitA.t2k.a2m with 1497 sequences, total weight= 1497 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.834906 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2oitA/info/2oitA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2oitA/nostruct-align/2oitA.t2k.a2m.gz, have 534328 columns in 2347 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dzkA/nostruct-align/1dzkA.t2k.a2m.gz
# 1dzkA.t2k.a2m with 209 sequences, total weight= 85.4239 avg weight= 0.408727 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30076 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dzkA/info/1dzkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dzkA/nostruct-align/1dzkA.t2k.a2m.gz, have 534476 columns in 2348 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cl2A/nostruct-align/2cl2A.t2k.a2m.gz
# 2cl2A.t2k.a2m with 341 sequences, total weight= 341 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17337 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cl2A/info/2cl2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cl2A/nostruct-align/2cl2A.t2k.a2m.gz, have 534774 columns in 2349 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r0uA/nostruct-align/1r0uA.t2k.a2m.gz
# 1r0uA.t2k.a2m with 24 sequences, total weight= 24 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20888 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r0uA/info/1r0uA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r0uA/nostruct-align/1r0uA.t2k.a2m.gz, have 534916 columns in 2350 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fsrA/nostruct-align/2fsrA.t2k.a2m.gz
# 2fsrA.t2k.a2m with 1074 sequences, total weight= 1074 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17161 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fsrA/info/2fsrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fsrA/nostruct-align/2fsrA.t2k.a2m.gz, have 535087 columns in 2351 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nyhA/nostruct-align/2nyhA.t2k.a2m.gz
# 2nyhA.t2k.a2m with 69 sequences, total weight= 16.1888 avg weight= 0.23462 36 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nyhA/info/2nyhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2n/2nyhA/nostruct-align/2nyhA.t2k.a2m.gz, have 535203 columns in 2352 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fmcA/nostruct-align/1fmcA.t2k.a2m.gz
# 1fmcA.t2k.a2m with 1644 sequences, total weight= 1644 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27888 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fmcA/info/1fmcA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fmcA/nostruct-align/1fmcA.t2k.a2m.gz, have 535458 columns in 2353 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fukA/nostruct-align/2fukA.t2k.a2m.gz
# 2fukA.t2k.a2m with 720 sequences, total weight= 720 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.964525 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fukA/info/2fukA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fukA/nostruct-align/2fukA.t2k.a2m.gz, have 535676 columns in 2354 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o3uA/nostruct-align/1o3uA.t2k.a2m.gz
# 1o3uA.t2k.a2m with 65 sequences, total weight= 50.2845 avg weight= 0.773608 44 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o3uA/info/1o3uA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1o3uA/nostruct-align/1o3uA.t2k.a2m.gz, have 535796 columns in 2355 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t46A/nostruct-align/1t46A.t2k.a2m.gz
# 1t46A.t2k.a2m with 15355 sequences, total weight= 15355 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17029 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t46A/info/1t46A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1t46A/nostruct-align/1t46A.t2k.a2m.gz, have 536093 columns in 2356 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yc5A/nostruct-align/1yc5A.t2k.a2m.gz
# 1yc5A.t2k.a2m with 495 sequences, total weight= 102.987 avg weight= 0.208054 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30552 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yc5A/info/1yc5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yc5A/nostruct-align/1yc5A.t2k.a2m.gz, have 536327 columns in 2357 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iujA/nostruct-align/1iujA.t2k.a2m.gz
# 1iujA.t2k.a2m with 130 sequences, total weight= 130 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15336 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iujA/info/1iujA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1iujA/nostruct-align/1iujA.t2k.a2m.gz, have 536429 columns in 2358 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2o8qA/nostruct-align/2o8qA.t2k.a2m.gz
# 2o8qA.t2k.a2m with 321 sequences, total weight= 321 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13327 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2o8qA/info/2o8qA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2o8qA/nostruct-align/2o8qA.t2k.a2m.gz, have 536551 columns in 2359 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2d1yA/nostruct-align/2d1yA.t2k.a2m.gz
# 2d1yA.t2k.a2m with 12108 sequences, total weight= 2815.42 avg weight= 0.232526 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.34623 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2d1yA/info/2d1yA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2d1yA/nostruct-align/2d1yA.t2k.a2m.gz, have 536791 columns in 2360 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jtvA/nostruct-align/1jtvA.t2k.a2m.gz
# 1jtvA.t2k.a2m with 4461 sequences, total weight= 4461 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19804 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jtvA/info/1jtvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jtvA/nostruct-align/1jtvA.t2k.a2m.gz, have 537069 columns in 2361 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rm6B/nostruct-align/1rm6B.t2k.a2m.gz
# 1rm6B.t2k.a2m with 256 sequences, total weight= 51.2279 avg weight= 0.200109 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rm6B/info/1rm6B.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rm6B/nostruct-align/1rm6B.t2k.a2m.gz, have 537392 columns in 2362 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2e/2e1nA/nostruct-align/2e1nA.t2k.a2m.gz
# 2e1nA.t2k.a2m with 244 sequences, total weight= 54.1556 avg weight= 0.221949 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2e/2e1nA/info/2e1nA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2e/2e1nA/nostruct-align/2e1nA.t2k.a2m.gz, have 537502 columns in 2363 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ijyA/nostruct-align/1ijyA.t2k.a2m.gz
# 1ijyA.t2k.a2m with 246 sequences, total weight= 26.8165 avg weight= 0.10901 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ijyA/info/1ijyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1ijyA/nostruct-align/1ijyA.t2k.a2m.gz, have 537624 columns in 2364 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o6dA/nostruct-align/1o6dA.t2k.a2m.gz
# 1o6dA.t2k.a2m with 117 sequences, total weight= 16.5821 avg weight= 0.141728 42 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o6dA/info/1o6dA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1o6dA/nostruct-align/1o6dA.t2k.a2m.gz, have 537771 columns in 2365 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wyxA/nostruct-align/1wyxA.t2k.a2m.gz
# 1wyxA.t2k.a2m with 3293 sequences, total weight= 66.8545 avg weight= 0.020302 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30115 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wyxA/info/1wyxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wyxA/nostruct-align/1wyxA.t2k.a2m.gz, have 537839 columns in 2366 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cex/nostruct-align/1cex.t2k.a2m.gz
# 1cex.t2k.a2m with 80 sequences, total weight= 20.6888 avg weight= 0.258609 31 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cex/info/1cex.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1cex/nostruct-align/1cex.t2k.a2m.gz, have 538036 columns in 2367 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j98A/nostruct-align/1j98A.t2k.a2m.gz
# 1j98A.t2k.a2m with 71 sequences, total weight= 6.67468 avg weight= 0.0940096 28 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j98A/info/1j98A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1j98A/nostruct-align/1j98A.t2k.a2m.gz, have 538190 columns in 2368 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pdo/nostruct-align/1pdo.t2k.a2m.gz
# 1pdo.t2k.a2m with 154 sequences, total weight= 61.5852 avg weight= 0.399904 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30099 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pdo/info/1pdo.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pdo/nostruct-align/1pdo.t2k.a2m.gz, have 538319 columns in 2369 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xngA/nostruct-align/1xngA.t2k.a2m.gz
# 1xngA.t2k.a2m with 801 sequences, total weight= 355.721 avg weight= 0.444096 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31156 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xngA/info/1xngA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xngA/nostruct-align/1xngA.t2k.a2m.gz, have 538574 columns in 2370 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gvdA/nostruct-align/1gvdA.t2k.a2m.gz
# 1gvdA.t2k.a2m with 1564 sequences, total weight= 25.5983 avg weight= 0.0163672 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gvdA/info/1gvdA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gvdA/nostruct-align/1gvdA.t2k.a2m.gz, have 538626 columns in 2371 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ytlA/nostruct-align/1ytlA.t2k.a2m.gz
# 1ytlA.t2k.a2m with 24 sequences, total weight= 9.35288 avg weight= 0.389703 23 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ytlA/info/1ytlA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1ytlA/nostruct-align/1ytlA.t2k.a2m.gz, have 538784 columns in 2372 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kmtA/nostruct-align/1kmtA.t2k.a2m.gz
# 1kmtA.t2k.a2m with 55 sequences, total weight= 10.0868 avg weight= 0.183397 27 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kmtA/info/1kmtA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kmtA/nostruct-align/1kmtA.t2k.a2m.gz, have 538922 columns in 2373 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v9yA/nostruct-align/1v9yA.t2k.a2m.gz
# 1v9yA.t2k.a2m with 1352 sequences, total weight= 1352 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.985003 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v9yA/info/1v9yA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v9yA/nostruct-align/1v9yA.t2k.a2m.gz, have 539025 columns in 2374 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2faoA/nostruct-align/2faoA.t2k.a2m.gz
# 2faoA.t2k.a2m with 162 sequences, total weight= 21.0381 avg weight= 0.129865 42 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2faoA/info/2faoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2faoA/nostruct-align/2faoA.t2k.a2m.gz, have 539320 columns in 2375 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ycc/nostruct-align/1ycc.t2k.a2m.gz
# 1ycc.t2k.a2m with 471 sequences, total weight= 75.2623 avg weight= 0.159793 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30035 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ycc/info/1ycc.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1ycc/nostruct-align/1ycc.t2k.a2m.gz, have 539428 columns in 2376 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j2jB/nostruct-align/1j2jB.t2k.a2m.gz
# 1j2jB.t2k.a2m with 18 sequences, total weight= 2.89069 avg weight= 0.160594 13 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j2jB/info/1j2jB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1j2jB/nostruct-align/1j2jB.t2k.a2m.gz, have 539469 columns in 2377 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ocyA/nostruct-align/1ocyA.t2k.a2m.gz
# 1ocyA.t2k.a2m with 74 sequences, total weight= 52.0773 avg weight= 0.703747 38 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ocyA/info/1ocyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1ocyA/nostruct-align/1ocyA.t2k.a2m.gz, have 539667 columns in 2378 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g6hA/nostruct-align/1g6hA.t2k.a2m.gz
# 1g6hA.t2k.a2m with 7287 sequences, total weight= 7287 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20741 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g6hA/info/1g6hA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1g6hA/nostruct-align/1g6hA.t2k.a2m.gz, have 539921 columns in 2379 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bwqA/nostruct-align/2bwqA.t2k.a2m.gz
# 2bwqA.t2k.a2m with 2043 sequences, total weight= 411.998 avg weight= 0.201663 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32909 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bwqA/info/2bwqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bwqA/nostruct-align/2bwqA.t2k.a2m.gz, have 540043 columns in 2380 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kwgA/nostruct-align/1kwgA.t2k.a2m.gz
# 1kwgA.t2k.a2m with 132 sequences, total weight= 118.268 avg weight= 0.895971 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kwgA/info/1kwgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kwgA/nostruct-align/1kwgA.t2k.a2m.gz, have 540687 columns in 2381 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kdj/nostruct-align/1kdj.t2k.a2m.gz
# 1kdj.t2k.a2m with 173 sequences, total weight= 72.8597 avg weight= 0.421154 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30035 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kdj/info/1kdj.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kdj/nostruct-align/1kdj.t2k.a2m.gz, have 540789 columns in 2382 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cyo/nostruct-align/1cyo.t2k.a2m.gz
# 1cyo.t2k.a2m with 308 sequences, total weight= 33.7006 avg weight= 0.109418 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cyo/info/1cyo.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1cyo/nostruct-align/1cyo.t2k.a2m.gz, have 540877 columns in 2383 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wwiA/nostruct-align/1wwiA.t2k.a2m.gz
# 1wwiA.t2k.a2m with 13 sequences, total weight= 7.10835 avg weight= 0.546796 18 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wwiA/info/1wwiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wwiA/nostruct-align/1wwiA.t2k.a2m.gz, have 541025 columns in 2384 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fq6A/nostruct-align/2fq6A.t2k.a2m.gz
# 2fq6A.t2k.a2m with 2033 sequences, total weight= 147.058 avg weight= 0.0723356 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31323 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fq6A/info/2fq6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fq6A/nostruct-align/2fq6A.t2k.a2m.gz, have 541416 columns in 2385 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1svdM/nostruct-align/1svdM.t2k.a2m.gz
# 1svdM.t2k.a2m with 707 sequences, total weight= 14.451 avg weight= 0.0204398 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1svdM/info/1svdM.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1svdM/nostruct-align/1svdM.t2k.a2m.gz, have 541524 columns in 2386 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m2kA/nostruct-align/1m2kA.t2k.a2m.gz
# 1m2kA.t2k.a2m with 175 sequences, total weight= 57.4491 avg weight= 0.328281 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30034 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m2kA/info/1m2kA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m2kA/nostruct-align/1m2kA.t2k.a2m.gz, have 541773 columns in 2387 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2ce2X/nostruct-align/2ce2X.t2k.a2m.gz
# 2ce2X.t2k.a2m with 6905 sequences, total weight= 6905 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28627 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2ce2X/info/2ce2X.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2ce2X/nostruct-align/2ce2X.t2k.a2m.gz, have 541939 columns in 2388 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gsoA/nostruct-align/1gsoA.t2k.a2m.gz
# 1gsoA.t2k.a2m with 443 sequences, total weight= 403.136 avg weight= 0.910013 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3013 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gsoA/info/1gsoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gsoA/nostruct-align/1gsoA.t2k.a2m.gz, have 542358 columns in 2389 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cc8A/nostruct-align/1cc8A.t2k.a2m.gz
# 1cc8A.t2k.a2m with 339 sequences, total weight= 60.107 avg weight= 0.177307 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3003 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cc8A/info/1cc8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1cc8A/nostruct-align/1cc8A.t2k.a2m.gz, have 542430 columns in 2390 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vpdA/nostruct-align/1vpdA.t2k.a2m.gz
# 1vpdA.t2k.a2m with 1647 sequences, total weight= 1647 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16051 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vpdA/info/1vpdA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vpdA/nostruct-align/1vpdA.t2k.a2m.gz, have 542724 columns in 2391 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r0pA/nostruct-align/1r0pA.t2k.a2m.gz
# 1r0pA.t2k.a2m with 12645 sequences, total weight= 12645 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18985 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r0pA/info/1r0pA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r0pA/nostruct-align/1r0pA.t2k.a2m.gz, have 543025 columns in 2392 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gq6A/nostruct-align/1gq6A.t2k.a2m.gz
# 1gq6A.t2k.a2m with 261 sequences, total weight= 148.557 avg weight= 0.569183 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30153 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gq6A/info/1gq6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gq6A/nostruct-align/1gq6A.t2k.a2m.gz, have 543320 columns in 2393 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oaa/nostruct-align/1oaa.t2k.a2m.gz
# 1oaa.t2k.a2m with 1471 sequences, total weight= 1471 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26672 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oaa/info/1oaa.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oaa/nostruct-align/1oaa.t2k.a2m.gz, have 543579 columns in 2394 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wcgA/nostruct-align/1wcgA.t2k.a2m.gz
# 1wcgA.t2k.a2m with 1119 sequences, total weight= 73.3116 avg weight= 0.0655153 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30324 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wcgA/info/1wcgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wcgA/nostruct-align/1wcgA.t2k.a2m.gz, have 544041 columns in 2395 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1ars/nostruct-align/1ars.t2k.a2m.gz
# 1ars.t2k.a2m with 389 sequences, total weight= 389 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22186 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1ars/info/1ars.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1ars/nostruct-align/1ars.t2k.a2m.gz, have 544437 columns in 2396 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vpbA/nostruct-align/1vpbA.t2k.a2m.gz
# 1vpbA.t2k.a2m with 384 sequences, total weight= 384 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22794 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vpbA/info/1vpbA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vpbA/nostruct-align/1vpbA.t2k.a2m.gz, have 544874 columns in 2397 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vpt/nostruct-align/1vpt.t2k.a2m.gz
# 1vpt.t2k.a2m with 48 sequences, total weight= 7.50865 avg weight= 0.15643 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vpt/info/1vpt.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vpt/nostruct-align/1vpt.t2k.a2m.gz, have 545165 columns in 2398 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hq2A/nostruct-align/2hq2A.t2k.a2m.gz
# 2hq2A.t2k.a2m with 106 sequences, total weight= 23.2059 avg weight= 0.218924 36 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hq2A/info/2hq2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hq2A/nostruct-align/2hq2A.t2k.a2m.gz, have 545496 columns in 2399 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2aq9A/nostruct-align/2aq9A.t2k.a2m.gz
# 2aq9A.t2k.a2m with 3075 sequences, total weight= 3075 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26621 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2aq9A/info/2aq9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2aq9A/nostruct-align/2aq9A.t2k.a2m.gz, have 545758 columns in 2400 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p4cA/nostruct-align/1p4cA.t2k.a2m.gz
# 1p4cA.t2k.a2m with 637 sequences, total weight= 637 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26688 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p4cA/info/1p4cA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1p4cA/nostruct-align/1p4cA.t2k.a2m.gz, have 546111 columns in 2401 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2g82A/nostruct-align/2g82A.t2k.a2m.gz
# 2g82A.t2k.a2m with 3551 sequences, total weight= 52.9971 avg weight= 0.0149246 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30043 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2g82A/info/2g82A.stride-mixed.strand_sep
WARNING: skipping g, since it is lower case.
WARNING: skipping f, since it is lower case.
WARNING: skipping d, since it is lower case.
WARNING: skipping u, since it is lower case.
# After reading /projects/compbio/experiments/models.97/pdb/2g/2g82A/nostruct-align/2g82A.t2k.a2m.gz, have 546437 columns in 2402 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zmaA/nostruct-align/1zmaA.t2k.a2m.gz
# 1zmaA.t2k.a2m with 201 sequences, total weight= 201 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19742 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zmaA/info/1zmaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zmaA/nostruct-align/1zmaA.t2k.a2m.gz, have 546555 columns in 2403 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2o6fA/nostruct-align/2o6fA.t2k.a2m.gz
# 2o6fA.t2k.a2m with 60 sequences, total weight= 6.96639 avg weight= 0.116106 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2o6fA/info/2o6fA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2o6fA/nostruct-align/2o6fA.t2k.a2m.gz, have 546712 columns in 2404 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2glzA/nostruct-align/2glzA.t2k.a2m.gz
# 2glzA.t2k.a2m with 73 sequences, total weight= 73 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23099 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2glzA/info/2glzA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2glzA/nostruct-align/2glzA.t2k.a2m.gz, have 546861 columns in 2405 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p0hA/nostruct-align/1p0hA.t2k.a2m.gz
# 1p0hA.t2k.a2m with 308 sequences, total weight= 308 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07902 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p0hA/info/1p0hA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1p0hA/nostruct-align/1p0hA.t2k.a2m.gz, have 547151 columns in 2406 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/7f/7fd1A/nostruct-align/7fd1A.t2k.a2m.gz
# 7fd1A.t2k.a2m with 671 sequences, total weight= 379.256 avg weight= 0.56521 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3036 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/7f/7fd1A/info/7fd1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/7f/7fd1A/nostruct-align/7fd1A.t2k.a2m.gz, have 547257 columns in 2407 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fr2B/nostruct-align/1fr2B.t2k.a2m.gz
# 1fr2B.t2k.a2m with 31 sequences, total weight= 4.4322 avg weight= 0.142974 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fr2B/info/1fr2B.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fr2B/nostruct-align/1fr2B.t2k.a2m.gz, have 547388 columns in 2408 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1usmA/nostruct-align/1usmA.t2k.a2m.gz
# 1usmA.t2k.a2m with 108 sequences, total weight= 20.5555 avg weight= 0.190328 39 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1usmA/info/1usmA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1usmA/nostruct-align/1usmA.t2k.a2m.gz, have 547465 columns in 2409 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vdkA/nostruct-align/1vdkA.t2k.a2m.gz
# 1vdkA.t2k.a2m with 2131 sequences, total weight= 218.051 avg weight= 0.102323 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31906 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vdkA/info/1vdkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vdkA/nostruct-align/1vdkA.t2k.a2m.gz, have 547923 columns in 2410 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2s/2sli/nostruct-align/2sli.t2k.a2m.gz
# 2sli.t2k.a2m with 150 sequences, total weight= 150 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24256 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2s/2sli/info/2sli.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2s/2sli/nostruct-align/2sli.t2k.a2m.gz, have 548602 columns in 2411 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dz3A/nostruct-align/1dz3A.t2k.a2m.gz
# 1dz3A.t2k.a2m with 2043 sequences, total weight= 1220.91 avg weight= 0.597604 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31411 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dz3A/info/1dz3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dz3A/nostruct-align/1dz3A.t2k.a2m.gz, have 548725 columns in 2412 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2f9hA/nostruct-align/2f9hA.t2k.a2m.gz
# 2f9hA.t2k.a2m with 47 sequences, total weight= 13.0725 avg weight= 0.278137 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2f9hA/info/2f9hA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2f9hA/nostruct-align/2f9hA.t2k.a2m.gz, have 548846 columns in 2413 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o2dA/nostruct-align/1o2dA.t2k.a2m.gz
# 1o2dA.t2k.a2m with 356 sequences, total weight= 353.09 avg weight= 0.991825 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o2dA/info/1o2dA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1o2dA/nostruct-align/1o2dA.t2k.a2m.gz, have 549205 columns in 2414 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h4gA/nostruct-align/1h4gA.t2k.a2m.gz
# 1h4gA.t2k.a2m with 186 sequences, total weight= 12.0488 avg weight= 0.0647782 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h4gA/info/1h4gA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h4gA/nostruct-align/1h4gA.t2k.a2m.gz, have 549411 columns in 2415 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yodA/nostruct-align/1yodA.t2k.a2m.gz
# 1yodA.t2k.a2m with 2 sequences, total weight= 1.90897 avg weight= 0.954484 5 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yodA/info/1yodA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yodA/nostruct-align/1yodA.t2k.a2m.gz, have 549441 columns in 2416 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2j05A/nostruct-align/2j05A.t2k.a2m.gz
# 2j05A.t2k.a2m with 1723 sequences, total weight= 53.9276 avg weight= 0.0312987 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30037 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2j05A/info/2j05A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2j05A/nostruct-align/2j05A.t2k.a2m.gz, have 549505 columns in 2417 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v8cA/nostruct-align/1v8cA.t2k.a2m.gz
# 1v8cA.t2k.a2m with 118 sequences, total weight= 13.5053 avg weight= 0.114452 17 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v8cA/info/1v8cA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v8cA/nostruct-align/1v8cA.t2k.a2m.gz, have 549670 columns in 2418 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2ns9A/nostruct-align/2ns9A.t2k.a2m.gz
# 2ns9A.t2k.a2m with 199 sequences, total weight= 199 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23266 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2ns9A/info/2ns9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2n/2ns9A/nostruct-align/2ns9A.t2k.a2m.gz, have 549822 columns in 2419 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zldA/nostruct-align/1zldA.t2k.a2m.gz
# 1zldA.t2k.a2m with 14 sequences, total weight= 1.86881 avg weight= 0.133487 9 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zldA/info/1zldA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zldA/nostruct-align/1zldA.t2k.a2m.gz, have 549925 columns in 2420 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mk4A/nostruct-align/1mk4A.t2k.a2m.gz
# 1mk4A.t2k.a2m with 454 sequences, total weight= 454 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.978641 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mk4A/info/1mk4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mk4A/nostruct-align/1mk4A.t2k.a2m.gz, have 550082 columns in 2421 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f1eA/nostruct-align/1f1eA.t2k.a2m.gz
# 1f1eA.t2k.a2m with 127 sequences, total weight= 9.6579 avg weight= 0.0760465 20 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f1eA/info/1f1eA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1f1eA/nostruct-align/1f1eA.t2k.a2m.gz, have 550233 columns in 2422 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nh8A/nostruct-align/1nh8A.t2k.a2m.gz
# 1nh8A.t2k.a2m with 122 sequences, total weight= 22.6603 avg weight= 0.18574 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nh8A/info/1nh8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nh8A/nostruct-align/1nh8A.t2k.a2m.gz, have 550509 columns in 2423 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2h8gA/nostruct-align/2h8gA.t2k.a2m.gz
# 2h8gA.t2k.a2m with 419 sequences, total weight= 419 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24736 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2h8gA/info/2h8gA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2h8gA/nostruct-align/2h8gA.t2k.a2m.gz, have 550755 columns in 2424 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ikpA/nostruct-align/1ikpA.t2k.a2m.gz
# 1ikpA.t2k.a2m with 29 sequences, total weight= 4.92165 avg weight= 0.169712 15 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ikpA/info/1ikpA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1ikpA/nostruct-align/1ikpA.t2k.a2m.gz, have 551354 columns in 2425 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2a2aA/nostruct-align/2a2aA.t2k.a2m.gz
# 2a2aA.t2k.a2m with 20512 sequences, total weight= 20512 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21388 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2a2aA/info/2a2aA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2a2aA/nostruct-align/2a2aA.t2k.a2m.gz, have 551658 columns in 2426 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nqtA/nostruct-align/2nqtA.t2k.a2m.gz
# 2nqtA.t2k.a2m with 594 sequences, total weight= 38.0706 avg weight= 0.064092 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30042 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nqtA/info/2nqtA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2n/2nqtA/nostruct-align/2nqtA.t2k.a2m.gz, have 552005 columns in 2427 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nlrA/nostruct-align/2nlrA.t2k.a2m.gz
# 2nlrA.t2k.a2m with 61 sequences, total weight= 27.4602 avg weight= 0.450167 35 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nlrA/info/2nlrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2n/2nlrA/nostruct-align/2nlrA.t2k.a2m.gz, have 552227 columns in 2428 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2jcbA/nostruct-align/2jcbA.t2k.a2m.gz
# 2jcbA.t2k.a2m with 399 sequences, total weight= 98.7558 avg weight= 0.247508 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30119 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2jcbA/info/2jcbA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2jcbA/nostruct-align/2jcbA.t2k.a2m.gz, have 552421 columns in 2429 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2ccvA/nostruct-align/2ccvA.t2k.a2m.gz
# 2ccvA.t2k.a2m with 52 sequences, total weight= 52 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21234 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2ccvA/info/2ccvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2ccvA/nostruct-align/2ccvA.t2k.a2m.gz, have 552520 columns in 2430 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2c2iA/nostruct-align/2c2iA.t2k.a2m.gz
# 2c2iA.t2k.a2m with 928 sequences, total weight= 928 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26166 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2c2iA/info/2c2iA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2c2iA/nostruct-align/2c2iA.t2k.a2m.gz, have 552669 columns in 2431 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bsyA/nostruct-align/2bsyA.t2k.a2m.gz
# 2bsyA.t2k.a2m with 321 sequences, total weight= 180.896 avg weight= 0.563538 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30068 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bsyA/info/2bsyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bsyA/nostruct-align/2bsyA.t2k.a2m.gz, have 552918 columns in 2432 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cm5A/nostruct-align/2cm5A.t2k.a2m.gz
# 2cm5A.t2k.a2m with 3699 sequences, total weight= 3699 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21835 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cm5A/info/2cm5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cm5A/nostruct-align/2cm5A.t2k.a2m.gz, have 553062 columns in 2433 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zmpA/nostruct-align/1zmpA.t2k.a2m.gz
# 1zmpA.t2k.a2m with 17 sequences, total weight= 2.72334 avg weight= 0.160196 17 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zmpA/info/1zmpA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zmpA/nostruct-align/1zmpA.t2k.a2m.gz, have 553094 columns in 2434 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1me4A/nostruct-align/1me4A.t2k.a2m.gz
# 1me4A.t2k.a2m with 1016 sequences, total weight= 111.855 avg weight= 0.110094 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30547 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1me4A/info/1me4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1me4A/nostruct-align/1me4A.t2k.a2m.gz, have 553309 columns in 2435 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2dxuA/nostruct-align/2dxuA.t2k.a2m.gz
# 2dxuA.t2k.a2m with 742 sequences, total weight= 270.153 avg weight= 0.364088 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30976 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2dxuA/info/2dxuA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2dxuA/nostruct-align/2dxuA.t2k.a2m.gz, have 553540 columns in 2436 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2a9dA/nostruct-align/2a9dA.t2k.a2m.gz
# 2a9dA.t2k.a2m with 441 sequences, total weight= 104.811 avg weight= 0.237666 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30087 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2a9dA/info/2a9dA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2a9dA/nostruct-align/2a9dA.t2k.a2m.gz, have 553909 columns in 2437 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1z6nA/nostruct-align/1z6nA.t2k.a2m.gz
# 1z6nA.t2k.a2m with 68 sequences, total weight= 68 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14591 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1z6nA/info/1z6nA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1z6nA/nostruct-align/1z6nA.t2k.a2m.gz, have 554075 columns in 2438 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qxmA/nostruct-align/1qxmA.t2k.a2m.gz
# 1qxmA.t2k.a2m with 92 sequences, total weight= 80.5894 avg weight= 0.875972 38 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qxmA/info/1qxmA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qxmA/nostruct-align/1qxmA.t2k.a2m.gz, have 554358 columns in 2439 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iwlA/nostruct-align/1iwlA.t2k.a2m.gz
# 1iwlA.t2k.a2m with 75 sequences, total weight= 75 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28601 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iwlA/info/1iwlA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1iwlA/nostruct-align/1iwlA.t2k.a2m.gz, have 554535 columns in 2440 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bfxA/nostruct-align/2bfxA.t2k.a2m.gz
# 2bfxA.t2k.a2m with 20415 sequences, total weight= 20415 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19422 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bfxA/info/2bfxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bfxA/nostruct-align/2bfxA.t2k.a2m.gz, have 554805 columns in 2441 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2e/2eveA/nostruct-align/2eveA.t2k.a2m.gz
# 2eveA.t2k.a2m with 167 sequences, total weight= 12.8732 avg weight= 0.0770852 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2e/2eveA/info/2eveA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2e/2eveA/nostruct-align/2eveA.t2k.a2m.gz, have 554954 columns in 2442 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k2xA/nostruct-align/1k2xA.t2k.a2m.gz
# 1k2xA.t2k.a2m with 116 sequences, total weight= 22.3202 avg weight= 0.192415 42 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k2xA/info/1k2xA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1k2xA/nostruct-align/1k2xA.t2k.a2m.gz, have 555110 columns in 2443 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jiwI/nostruct-align/1jiwI.t2k.a2m.gz
# 1jiwI.t2k.a2m with 22 sequences, total weight= 8.90887 avg weight= 0.404948 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jiwI/info/1jiwI.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jiwI/nostruct-align/1jiwI.t2k.a2m.gz, have 555215 columns in 2444 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2c60A/nostruct-align/2c60A.t2k.a2m.gz
# 2c60A.t2k.a2m with 41 sequences, total weight= 4.14866 avg weight= 0.101187 18 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2c60A/info/2c60A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2c60A/nostruct-align/2c60A.t2k.a2m.gz, have 555300 columns in 2445 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jp4A/nostruct-align/1jp4A.t2k.a2m.gz
# 1jp4A.t2k.a2m with 444 sequences, total weight= 444 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25185 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jp4A/info/1jp4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jp4A/nostruct-align/1jp4A.t2k.a2m.gz, have 555602 columns in 2446 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pyoB/nostruct-align/1pyoB.t2k.a2m.gz
# 1pyoB.t2k.a2m with 193 sequences, total weight= 22.9843 avg weight= 0.11909 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pyoB/info/1pyoB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pyoB/nostruct-align/1pyoB.t2k.a2m.gz, have 555700 columns in 2447 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1evyA/nostruct-align/1evyA.t2k.a2m.gz
# 1evyA.t2k.a2m with 390 sequences, total weight= 73.3655 avg weight= 0.188117 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30044 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1evyA/info/1evyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1evyA/nostruct-align/1evyA.t2k.a2m.gz, have 556046 columns in 2448 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2jg6A/nostruct-align/2jg6A.t2k.a2m.gz
# 2jg6A.t2k.a2m with 500 sequences, total weight= 30.3659 avg weight= 0.0607318 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2jg6A/info/2jg6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2jg6A/nostruct-align/2jg6A.t2k.a2m.gz, have 556232 columns in 2449 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rfyA/nostruct-align/1rfyA.t2k.a2m.gz
# 1rfyA.t2k.a2m with 11 sequences, total weight= 2.98225 avg weight= 0.271114 12 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rfyA/info/1rfyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rfyA/nostruct-align/1rfyA.t2k.a2m.gz, have 556321 columns in 2450 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ob8A/nostruct-align/1ob8A.t2k.a2m.gz
# 1ob8A.t2k.a2m with 19 sequences, total weight= 13.5359 avg weight= 0.712417 24 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ob8A/info/1ob8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1ob8A/nostruct-align/1ob8A.t2k.a2m.gz, have 556440 columns in 2451 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2onfA/nostruct-align/2onfA.t2k.a2m.gz
# 2onfA.t2k.a2m with 564 sequences, total weight= 564 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17785 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2onfA/info/2onfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2onfA/nostruct-align/2onfA.t2k.a2m.gz, have 556580 columns in 2452 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mtpB/nostruct-align/1mtpB.t2k.a2m.gz
# 1mtpB.t2k.a2m with 4 sequences, total weight= 1.70661 avg weight= 0.426652 7 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mtpB/info/1mtpB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mtpB/nostruct-align/1mtpB.t2k.a2m.gz, have 556615 columns in 2453 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2j0iA/nostruct-align/2j0iA.t2k.a2m.gz
# 2j0iA.t2k.a2m with 20505 sequences, total weight= 20505 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26362 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2j0iA/info/2j0iA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2j0iA/nostruct-align/2j0iA.t2k.a2m.gz, have 556905 columns in 2454 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h9oA/nostruct-align/1h9oA.t2k.a2m.gz
# 1h9oA.t2k.a2m with 735 sequences, total weight= 112.21 avg weight= 0.152666 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30499 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h9oA/info/1h9oA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h9oA/nostruct-align/1h9oA.t2k.a2m.gz, have 557013 columns in 2455 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g12A/nostruct-align/1g12A.t2k.a2m.gz
# 1g12A.t2k.a2m with 20 sequences, total weight= 8.97535 avg weight= 0.448767 22 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g12A/info/1g12A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1g12A/nostruct-align/1g12A.t2k.a2m.gz, have 557180 columns in 2456 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k3yA/nostruct-align/1k3yA.t2k.a2m.gz
# 1k3yA.t2k.a2m with 889 sequences, total weight= 889 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25949 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k3yA/info/1k3yA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1k3yA/nostruct-align/1k3yA.t2k.a2m.gz, have 557401 columns in 2457 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mo9A/nostruct-align/1mo9A.t2k.a2m.gz
# 1mo9A.t2k.a2m with 1745 sequences, total weight= 1745 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11573 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mo9A/info/1mo9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mo9A/nostruct-align/1mo9A.t2k.a2m.gz, have 557923 columns in 2458 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3n/3nul/nostruct-align/3nul.t2k.a2m.gz
# 3nul.t2k.a2m with 161 sequences, total weight= 21.1466 avg weight= 0.131345 39 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3n/3nul/info/3nul.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/3n/3nul/nostruct-align/3nul.t2k.a2m.gz, have 558053 columns in 2459 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2j66A/nostruct-align/2j66A.t2k.a2m.gz
# 2j66A.t2k.a2m with 1263 sequences, total weight= 1263 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29092 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2j66A/info/2j66A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2j66A/nostruct-align/2j66A.t2k.a2m.gz, have 558443 columns in 2460 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x0tA/nostruct-align/1x0tA.t2k.a2m.gz
# 1x0tA.t2k.a2m with 59 sequences, total weight= 43.3193 avg weight= 0.734225 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x0tA/info/1x0tA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1x0tA/nostruct-align/1x0tA.t2k.a2m.gz, have 558549 columns in 2461 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zmtA/nostruct-align/1zmtA.t2k.a2m.gz
# 1zmtA.t2k.a2m with 5949 sequences, total weight= 517.635 avg weight= 0.0870122 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.35034 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zmtA/info/1zmtA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zmtA/nostruct-align/1zmtA.t2k.a2m.gz, have 558801 columns in 2462 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uzkA/nostruct-align/1uzkA.t2k.a2m.gz
# 1uzkA.t2k.a2m with 7593 sequences, total weight= 7593 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.154 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uzkA/info/1uzkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uzkA/nostruct-align/1uzkA.t2k.a2m.gz, have 558953 columns in 2463 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bwfA/nostruct-align/2bwfA.t2k.a2m.gz
# 2bwfA.t2k.a2m with 1608 sequences, total weight= 98.945 avg weight= 0.061533 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3034 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bwfA/info/2bwfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bwfA/nostruct-align/2bwfA.t2k.a2m.gz, have 559030 columns in 2464 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m2xA/nostruct-align/1m2xA.t2k.a2m.gz
# 1m2xA.t2k.a2m with 318 sequences, total weight= 318 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10427 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m2xA/info/1m2xA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m2xA/nostruct-align/1m2xA.t2k.a2m.gz, have 559249 columns in 2465 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qj4A/nostruct-align/1qj4A.t2k.a2m.gz
# 1qj4A.t2k.a2m with 366 sequences, total weight= 366 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.943497 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qj4A/info/1qj4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qj4A/nostruct-align/1qj4A.t2k.a2m.gz, have 559505 columns in 2466 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vr5A/nostruct-align/1vr5A.t2k.a2m.gz
# 1vr5A.t2k.a2m with 1448 sequences, total weight= 1448 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07154 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vr5A/info/1vr5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vr5A/nostruct-align/1vr5A.t2k.a2m.gz, have 560041 columns in 2467 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n8vA/nostruct-align/1n8vA.t2k.a2m.gz
# 1n8vA.t2k.a2m with 55 sequences, total weight= 8.759 avg weight= 0.159254 27 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n8vA/info/1n8vA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1n8vA/nostruct-align/1n8vA.t2k.a2m.gz, have 560142 columns in 2468 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nnuA/nostruct-align/2nnuA.t2k.a2m.gz
# 2nnuA.t2k.a2m with 196 sequences, total weight= 12.5412 avg weight= 0.0639858 35 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nnuA/info/2nnuA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2n/2nnuA/nostruct-align/2nnuA.t2k.a2m.gz, have 560343 columns in 2469 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hxmA/nostruct-align/2hxmA.t2k.a2m.gz
# 2hxmA.t2k.a2m with 593 sequences, total weight= 24.0467 avg weight= 0.040551 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hxmA/info/2hxmA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hxmA/nostruct-align/2hxmA.t2k.a2m.gz, have 560566 columns in 2470 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gj7B/nostruct-align/1gj7B.t2k.a2m.gz
# 1gj7B.t2k.a2m with 1949 sequences, total weight= 810.543 avg weight= 0.415876 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32172 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gj7B/info/1gj7B.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gj7B/nostruct-align/1gj7B.t2k.a2m.gz, have 560812 columns in 2471 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o8bA/nostruct-align/1o8bA.t2k.a2m.gz
# 1o8bA.t2k.a2m with 128 sequences, total weight= 14.4188 avg weight= 0.112647 36 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o8bA/info/1o8bA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1o8bA/nostruct-align/1o8bA.t2k.a2m.gz, have 560980 columns in 2472 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fqxA/nostruct-align/2fqxA.t2k.a2m.gz
# 2fqxA.t2k.a2m with 336 sequences, total weight= 146.163 avg weight= 0.43501 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30217 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fqxA/info/2fqxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fqxA/nostruct-align/2fqxA.t2k.a2m.gz, have 561296 columns in 2473 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f1uA/nostruct-align/1f1uA.t2k.a2m.gz
# 1f1uA.t2k.a2m with 390 sequences, total weight= 390 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18201 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f1uA/info/1f1uA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1f1uA/nostruct-align/1f1uA.t2k.a2m.gz, have 561618 columns in 2474 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x7dA/nostruct-align/1x7dA.t2k.a2m.gz
# 1x7dA.t2k.a2m with 187 sequences, total weight= 72.485 avg weight= 0.38762 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30029 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x7dA/info/1x7dA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1x7dA/nostruct-align/1x7dA.t2k.a2m.gz, have 561958 columns in 2475 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tqjA/nostruct-align/1tqjA.t2k.a2m.gz
# 1tqjA.t2k.a2m with 303 sequences, total weight= 24.6397 avg weight= 0.081319 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tqjA/info/1tqjA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tqjA/nostruct-align/1tqjA.t2k.a2m.gz, have 562175 columns in 2476 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2je6I/nostruct-align/2je6I.t2k.a2m.gz
# 2je6I.t2k.a2m with 164 sequences, total weight= 79.835 avg weight= 0.486799 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2je6I/info/2je6I.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2je6I/nostruct-align/2je6I.t2k.a2m.gz, have 562382 columns in 2477 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k5cA/nostruct-align/1k5cA.t2k.a2m.gz
# 1k5cA.t2k.a2m with 383 sequences, total weight= 68.4106 avg weight= 0.178618 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3014 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k5cA/info/1k5cA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1k5cA/nostruct-align/1k5cA.t2k.a2m.gz, have 562715 columns in 2478 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e5pA/nostruct-align/1e5pA.t2k.a2m.gz
# 1e5pA.t2k.a2m with 191 sequences, total weight= 75.935 avg weight= 0.397566 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30041 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e5pA/info/1e5pA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1e5pA/nostruct-align/1e5pA.t2k.a2m.gz, have 562864 columns in 2479 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dj0A/nostruct-align/1dj0A.t2k.a2m.gz
# 1dj0A.t2k.a2m with 238 sequences, total weight= 63.0229 avg weight= 0.264802 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30059 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dj0A/info/1dj0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dj0A/nostruct-align/1dj0A.t2k.a2m.gz, have 563128 columns in 2480 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2imhA/nostruct-align/2imhA.t2k.a2m.gz
# 2imhA.t2k.a2m with 76 sequences, total weight= 19.2969 avg weight= 0.253906 36 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2imhA/info/2imhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2imhA/nostruct-align/2imhA.t2k.a2m.gz, have 563354 columns in 2481 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q25A/nostruct-align/1q25A.t2k.a2m.gz
# 1q25A.t2k.a2m with 136 sequences, total weight= 26.667 avg weight= 0.196081 36 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q25A/info/1q25A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1q25A/nostruct-align/1q25A.t2k.a2m.gz, have 563782 columns in 2482 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2a1hA/nostruct-align/2a1hA.t2k.a2m.gz
# 2a1hA.t2k.a2m with 555 sequences, total weight= 169.684 avg weight= 0.305736 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30234 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2a1hA/info/2a1hA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2a1hA/nostruct-align/2a1hA.t2k.a2m.gz, have 564145 columns in 2483 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iy8A/nostruct-align/1iy8A.t2k.a2m.gz
# 1iy8A.t2k.a2m with 4229 sequences, total weight= 4229 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2625 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iy8A/info/1iy8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1iy8A/nostruct-align/1iy8A.t2k.a2m.gz, have 564403 columns in 2484 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jy1A/nostruct-align/1jy1A.t2k.a2m.gz
# 1jy1A.t2k.a2m with 32 sequences, total weight= 16.8068 avg weight= 0.525212 27 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jy1A/info/1jy1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jy1A/nostruct-align/1jy1A.t2k.a2m.gz, have 564842 columns in 2485 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cirA/nostruct-align/2cirA.t2k.a2m.gz
# 2cirA.t2k.a2m with 283 sequences, total weight= 283 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22283 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cirA/info/2cirA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cirA/nostruct-align/2cirA.t2k.a2m.gz, have 565130 columns in 2486 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hztA/nostruct-align/1hztA.t2k.a2m.gz
# 1hztA.t2k.a2m with 378 sequences, total weight= 143.255 avg weight= 0.378981 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30073 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hztA/info/1hztA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hztA/nostruct-align/1hztA.t2k.a2m.gz, have 565283 columns in 2487 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fpoA/nostruct-align/1fpoA.t2k.a2m.gz
# 1fpoA.t2k.a2m with 366 sequences, total weight= 225.593 avg weight= 0.616373 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30227 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fpoA/info/1fpoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fpoA/nostruct-align/1fpoA.t2k.a2m.gz, have 565454 columns in 2488 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1enfA/nostruct-align/1enfA.t2k.a2m.gz
# 1enfA.t2k.a2m with 210 sequences, total weight= 44.1561 avg weight= 0.210267 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1enfA/info/1enfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1enfA/nostruct-align/1enfA.t2k.a2m.gz, have 565666 columns in 2489 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oygA/nostruct-align/1oygA.t2k.a2m.gz
# 1oygA.t2k.a2m with 48 sequences, total weight= 11.3 avg weight= 0.235417 28 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oygA/info/1oygA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oygA/nostruct-align/1oygA.t2k.a2m.gz, have 566106 columns in 2490 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nlqA/nostruct-align/1nlqA.t2k.a2m.gz
# 1nlqA.t2k.a2m with 48 sequences, total weight= 7.07997 avg weight= 0.147499 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nlqA/info/1nlqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nlqA/nostruct-align/1nlqA.t2k.a2m.gz, have 566211 columns in 2491 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gl5A/nostruct-align/2gl5A.t2k.a2m.gz
# 2gl5A.t2k.a2m with 875 sequences, total weight= 875 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14826 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gl5A/info/2gl5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gl5A/nostruct-align/2gl5A.t2k.a2m.gz, have 566612 columns in 2492 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o8xA/nostruct-align/1o8xA.t2k.a2m.gz
# 1o8xA.t2k.a2m with 495 sequences, total weight= 495 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2204 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o8xA/info/1o8xA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1o8xA/nostruct-align/1o8xA.t2k.a2m.gz, have 566755 columns in 2493 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nulA/nostruct-align/1nulA.t2k.a2m.gz
# 1nulA.t2k.a2m with 493 sequences, total weight= 277.961 avg weight= 0.563816 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30276 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nulA/info/1nulA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nulA/nostruct-align/1nulA.t2k.a2m.gz, have 566897 columns in 2494 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wjxA/nostruct-align/1wjxA.t2k.a2m.gz
# 1wjxA.t2k.a2m with 231 sequences, total weight= 7.04327 avg weight= 0.0304904 31 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wjxA/info/1wjxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wjxA/nostruct-align/1wjxA.t2k.a2m.gz, have 567009 columns in 2495 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xw3A/nostruct-align/1xw3A.t2k.a2m.gz
# 1xw3A.t2k.a2m with 40 sequences, total weight= 10.4255 avg weight= 0.260638 28 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xw3A/info/1xw3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xw3A/nostruct-align/1xw3A.t2k.a2m.gz, have 567119 columns in 2496 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tc1A/nostruct-align/1tc1A.t2k.a2m.gz
# 1tc1A.t2k.a2m with 350 sequences, total weight= 75.2612 avg weight= 0.215032 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30109 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tc1A/info/1tc1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tc1A/nostruct-align/1tc1A.t2k.a2m.gz, have 567294 columns in 2497 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1twyA/nostruct-align/1twyA.t2k.a2m.gz
# 1twyA.t2k.a2m with 490 sequences, total weight= 490 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17641 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1twyA/info/1twyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1twyA/nostruct-align/1twyA.t2k.a2m.gz, have 567543 columns in 2498 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vefA/nostruct-align/1vefA.t2k.a2m.gz
# 1vefA.t2k.a2m with 2225 sequences, total weight= 2225 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24306 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vefA/info/1vefA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vefA/nostruct-align/1vefA.t2k.a2m.gz, have 567930 columns in 2499 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bb1A/nostruct-align/1bb1A.t2k.a2m.gz
# 1bb1A.t2k.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29361 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bb1A/info/1bb1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1bb1A/nostruct-align/1bb1A.t2k.a2m.gz, have 567964 columns in 2500 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nx9A/nostruct-align/2nx9A.t2k.a2m.gz
# 2nx9A.t2k.a2m with 2023 sequences, total weight= 2023 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28979 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nx9A/info/2nx9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2n/2nx9A/nostruct-align/2nx9A.t2k.a2m.gz, have 568415 columns in 2501 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ypyA/nostruct-align/1ypyA.t2k.a2m.gz
# 1ypyA.t2k.a2m with 61 sequences, total weight= 11.0128 avg weight= 0.180538 29 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ypyA/info/1ypyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1ypyA/nostruct-align/1ypyA.t2k.a2m.gz, have 568597 columns in 2502 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fe0A/nostruct-align/1fe0A.t2k.a2m.gz
# 1fe0A.t2k.a2m with 309 sequences, total weight= 41.0024 avg weight= 0.132694 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fe0A/info/1fe0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fe0A/nostruct-align/1fe0A.t2k.a2m.gz, have 568663 columns in 2503 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2i0oA/nostruct-align/2i0oA.t2k.a2m.gz
# 2i0oA.t2k.a2m with 1578 sequences, total weight= 1578 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15329 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2i0oA/info/2i0oA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2i0oA/nostruct-align/2i0oA.t2k.a2m.gz, have 568950 columns in 2504 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gai/nostruct-align/1gai.t2k.a2m.gz
# 1gai.t2k.a2m with 88 sequences, total weight= 43.7889 avg weight= 0.497602 36 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gai/info/1gai.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gai/nostruct-align/1gai.t2k.a2m.gz, have 569422 columns in 2505 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1ctf/nostruct-align/1ctf.t2k.a2m.gz
# 1ctf.t2k.a2m with 234 sequences, total weight= 7.70244 avg weight= 0.0329164 31 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1ctf/info/1ctf.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1ctf/nostruct-align/1ctf.t2k.a2m.gz, have 569490 columns in 2506 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1roaA/nostruct-align/1roaA.t2k.a2m.gz
# 1roaA.t2k.a2m with 299 sequences, total weight= 93.1853 avg weight= 0.311657 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30191 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1roaA/info/1roaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1roaA/nostruct-align/1roaA.t2k.a2m.gz, have 569601 columns in 2507 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cx1A/nostruct-align/2cx1A.t2k.a2m.gz
# 2cx1A.t2k.a2m with 443 sequences, total weight= 443 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.226 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cx1A/info/2cx1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cx1A/nostruct-align/2cx1A.t2k.a2m.gz, have 569785 columns in 2508 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cvbA/nostruct-align/2cvbA.t2k.a2m.gz
# 2cvbA.t2k.a2m with 461 sequences, total weight= 234.738 avg weight= 0.509194 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30154 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cvbA/info/2cvbA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cvbA/nostruct-align/2cvbA.t2k.a2m.gz, have 569972 columns in 2509 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wkoA/nostruct-align/1wkoA.t2k.a2m.gz
# 1wkoA.t2k.a2m with 284 sequences, total weight= 96.6537 avg weight= 0.34033 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30095 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wkoA/info/1wkoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wkoA/nostruct-align/1wkoA.t2k.a2m.gz, have 570137 columns in 2510 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2p/2pth/nostruct-align/2pth.t2k.a2m.gz
# 2pth.t2k.a2m with 179 sequences, total weight= 19.3426 avg weight= 0.108059 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2p/2pth/info/2pth.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2p/2pth/nostruct-align/2pth.t2k.a2m.gz, have 570330 columns in 2511 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cu3A/nostruct-align/2cu3A.t2k.a2m.gz
# 2cu3A.t2k.a2m with 161 sequences, total weight= 24.6528 avg weight= 0.153123 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cu3A/info/2cu3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cu3A/nostruct-align/2cu3A.t2k.a2m.gz, have 570393 columns in 2512 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e9gA/nostruct-align/1e9gA.t2k.a2m.gz
# 1e9gA.t2k.a2m with 284 sequences, total weight= 26.4343 avg weight= 0.0930784 38 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e9gA/info/1e9gA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1e9gA/nostruct-align/1e9gA.t2k.a2m.gz, have 570677 columns in 2513 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cfmA/nostruct-align/2cfmA.t2k.a2m.gz
# 2cfmA.t2k.a2m with 658 sequences, total weight= 658 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12468 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cfmA/info/2cfmA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cfmA/nostruct-align/2cfmA.t2k.a2m.gz, have 571238 columns in 2514 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zmiA/nostruct-align/1zmiA.t2k.a2m.gz
# 1zmiA.t2k.a2m with 16 sequences, total weight= 1.84243 avg weight= 0.115152 11 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zmiA/info/1zmiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zmiA/nostruct-align/1zmiA.t2k.a2m.gz, have 571267 columns in 2515 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lucA/nostruct-align/1lucA.t2k.a2m.gz
# 1lucA.t2k.a2m with 373 sequences, total weight= 373 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10639 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lucA/info/1lucA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lucA/nostruct-align/1lucA.t2k.a2m.gz, have 571593 columns in 2516 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v8hA/nostruct-align/1v8hA.t2k.a2m.gz
# 1v8hA.t2k.a2m with 40 sequences, total weight= 16.5368 avg weight= 0.413421 32 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v8hA/info/1v8hA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v8hA/nostruct-align/1v8hA.t2k.a2m.gz, have 571699 columns in 2517 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sg6A/nostruct-align/1sg6A.t2k.a2m.gz
# 1sg6A.t2k.a2m with 361 sequences, total weight= 226.015 avg weight= 0.626079 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30234 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sg6A/info/1sg6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1sg6A/nostruct-align/1sg6A.t2k.a2m.gz, have 572076 columns in 2518 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2chhA/nostruct-align/2chhA.t2k.a2m.gz
# 2chhA.t2k.a2m with 33 sequences, total weight= 8.56206 avg weight= 0.259456 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2chhA/info/2chhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2chhA/nostruct-align/2chhA.t2k.a2m.gz, have 572189 columns in 2519 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gdzA/nostruct-align/2gdzA.t2k.a2m.gz
# 2gdzA.t2k.a2m with 12697 sequences, total weight= 7306.52 avg weight= 0.575453 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31795 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gdzA/info/2gdzA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gdzA/nostruct-align/2gdzA.t2k.a2m.gz, have 572455 columns in 2520 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xmkA/nostruct-align/1xmkA.t2k.a2m.gz
# 1xmkA.t2k.a2m with 77 sequences, total weight= 14.0299 avg weight= 0.182206 24 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xmkA/info/1xmkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xmkA/nostruct-align/1xmkA.t2k.a2m.gz, have 572534 columns in 2521 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1df4A/nostruct-align/1df4A.t2k.a2m.gz
# 1df4A.t2k.a2m with 2018 sequences, total weight= 9.42469 avg weight= 0.00467031 32 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1df4A/info/1df4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1df4A/nostruct-align/1df4A.t2k.a2m.gz, have 572591 columns in 2522 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mrj/nostruct-align/1mrj.t2k.a2m.gz
# 1mrj.t2k.a2m with 268 sequences, total weight= 44.0895 avg weight= 0.164513 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mrj/info/1mrj.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mrj/nostruct-align/1mrj.t2k.a2m.gz, have 572838 columns in 2523 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2opjA/nostruct-align/2opjA.t2k.a2m.gz
# 2opjA.t2k.a2m with 1254 sequences, total weight= 1254 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24965 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2opjA/info/2opjA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2opjA/nostruct-align/2opjA.t2k.a2m.gz, have 573132 columns in 2524 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bu3A/nostruct-align/2bu3A.t2k.a2m.gz
# 2bu3A.t2k.a2m with 54 sequences, total weight= 13.2623 avg weight= 0.245598 30 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bu3A/info/2bu3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bu3A/nostruct-align/2bu3A.t2k.a2m.gz, have 573332 columns in 2525 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f8mA/nostruct-align/1f8mA.t2k.a2m.gz
# 1f8mA.t2k.a2m with 261 sequences, total weight= 37.6124 avg weight= 0.144109 42 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f8mA/info/1f8mA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1f8mA/nostruct-align/1f8mA.t2k.a2m.gz, have 573759 columns in 2526 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1earA/nostruct-align/1earA.t2k.a2m.gz
# 1earA.t2k.a2m with 97 sequences, total weight= 32.9008 avg weight= 0.339183 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1earA/info/1earA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1earA/nostruct-align/1earA.t2k.a2m.gz, have 573901 columns in 2527 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h4rA/nostruct-align/1h4rA.t2k.a2m.gz
# 1h4rA.t2k.a2m with 440 sequences, total weight= 180.119 avg weight= 0.409362 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30666 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h4rA/info/1h4rA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h4rA/nostruct-align/1h4rA.t2k.a2m.gz, have 574195 columns in 2528 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r9wA/nostruct-align/1r9wA.t2k.a2m.gz
# 1r9wA.t2k.a2m with 141 sequences, total weight= 11.2657 avg weight= 0.0798984 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r9wA/info/1r9wA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r9wA/nostruct-align/1r9wA.t2k.a2m.gz, have 574333 columns in 2529 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ryiA/nostruct-align/1ryiA.t2k.a2m.gz
# 1ryiA.t2k.a2m with 1897 sequences, total weight= 1897 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.920647 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ryiA/info/1ryiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1ryiA/nostruct-align/1ryiA.t2k.a2m.gz, have 574697 columns in 2530 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y7rA/nostruct-align/1y7rA.t2k.a2m.gz
# 1y7rA.t2k.a2m with 834 sequences, total weight= 834 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10444 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y7rA/info/1y7rA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1y7rA/nostruct-align/1y7rA.t2k.a2m.gz, have 574830 columns in 2531 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2c3nA/nostruct-align/2c3nA.t2k.a2m.gz
# 2c3nA.t2k.a2m with 2235 sequences, total weight= 2235 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0858 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2c3nA/info/2c3nA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2c3nA/nostruct-align/2c3nA.t2k.a2m.gz, have 575069 columns in 2532 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cc0A/nostruct-align/2cc0A.t2k.a2m.gz
# 2cc0A.t2k.a2m with 936 sequences, total weight= 936 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27699 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cc0A/info/2cc0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cc0A/nostruct-align/2cc0A.t2k.a2m.gz, have 575261 columns in 2533 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oa8A/nostruct-align/1oa8A.t2k.a2m.gz
# 1oa8A.t2k.a2m with 24 sequences, total weight= 6.1113 avg weight= 0.254637 19 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oa8A/info/1oa8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oa8A/nostruct-align/1oa8A.t2k.a2m.gz, have 575389 columns in 2534 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pwaA/nostruct-align/1pwaA.t2k.a2m.gz
# 1pwaA.t2k.a2m with 301 sequences, total weight= 22.9882 avg weight= 0.0763729 39 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pwaA/info/1pwaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pwaA/nostruct-align/1pwaA.t2k.a2m.gz, have 575512 columns in 2535 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cbzA/nostruct-align/2cbzA.t2k.a2m.gz
# 2cbzA.t2k.a2m with 22538 sequences, total weight= 22538 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29758 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cbzA/info/2cbzA.stride-mixed.strand_sep
WARNING: skipping p, since it is lower case.
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cbzA/nostruct-align/2cbzA.t2k.a2m.gz, have 575742 columns in 2536 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2obpA/nostruct-align/2obpA.t2k.a2m.gz
# 2obpA.t2k.a2m with 23 sequences, total weight= 3.44111 avg weight= 0.149613 16 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2obpA/info/2obpA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2obpA/nostruct-align/2obpA.t2k.a2m.gz, have 575823 columns in 2537 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w23A/nostruct-align/1w23A.t2k.a2m.gz
# 1w23A.t2k.a2m with 385 sequences, total weight= 201.907 avg weight= 0.524434 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30481 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w23A/info/1w23A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w23A/nostruct-align/1w23A.t2k.a2m.gz, have 576183 columns in 2538 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e2kA/nostruct-align/1e2kA.t2k.a2m.gz
# 1e2kA.t2k.a2m with 160 sequences, total weight= 24.6681 avg weight= 0.154176 36 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e2kA/info/1e2kA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1e2kA/nostruct-align/1e2kA.t2k.a2m.gz, have 576491 columns in 2539 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2f8aA/nostruct-align/2f8aA.t2k.a2m.gz
# 2f8aA.t2k.a2m with 752 sequences, total weight= 69.5394 avg weight= 0.0924727 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30035 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2f8aA/info/2f8aA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2f8aA/nostruct-align/2f8aA.t2k.a2m.gz, have 576677 columns in 2540 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2ixmA/nostruct-align/2ixmA.t2k.a2m.gz
# 2ixmA.t2k.a2m with 123 sequences, total weight= 15.4188 avg weight= 0.125356 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2ixmA/info/2ixmA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2ixmA/nostruct-align/2ixmA.t2k.a2m.gz, have 576977 columns in 2541 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cs6A/nostruct-align/1cs6A.t2k.a2m.gz
# 1cs6A.t2k.a2m with 4024 sequences, total weight= 4024 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.882561 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cs6A/info/1cs6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1cs6A/nostruct-align/1cs6A.t2k.a2m.gz, have 577359 columns in 2542 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2halA/nostruct-align/2halA.t2k.a2m.gz
# 2halA.t2k.a2m with 360 sequences, total weight= 238.158 avg weight= 0.661551 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30312 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2halA/info/2halA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2halA/nostruct-align/2halA.t2k.a2m.gz, have 577571 columns in 2543 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2b8iA/nostruct-align/2b8iA.t2k.a2m.gz
# 2b8iA.t2k.a2m with 15 sequences, total weight= 3.44135 avg weight= 0.229423 15 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2b8iA/info/2b8iA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2b8iA/nostruct-align/2b8iA.t2k.a2m.gz, have 577648 columns in 2544 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2j6aA/nostruct-align/2j6aA.t2k.a2m.gz
# 2j6aA.t2k.a2m with 75 sequences, total weight= 20.7588 avg weight= 0.276785 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2j6aA/info/2j6aA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2j6aA/nostruct-align/2j6aA.t2k.a2m.gz, have 577784 columns in 2545 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1toaA/nostruct-align/1toaA.t2k.a2m.gz
# 1toaA.t2k.a2m with 282 sequences, total weight= 110.823 avg weight= 0.392988 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3034 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1toaA/info/1toaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1toaA/nostruct-align/1toaA.t2k.a2m.gz, have 578061 columns in 2546 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cxyA/nostruct-align/2cxyA.t2k.a2m.gz
# 2cxyA.t2k.a2m with 469 sequences, total weight= 88.7624 avg weight= 0.189259 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30181 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cxyA/info/2cxyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cxyA/nostruct-align/2cxyA.t2k.a2m.gz, have 578175 columns in 2547 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v5dA/nostruct-align/1v5dA.t2k.a2m.gz
# 1v5dA.t2k.a2m with 79 sequences, total weight= 54.2892 avg weight= 0.687205 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v5dA/info/1v5dA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v5dA/nostruct-align/1v5dA.t2k.a2m.gz, have 578561 columns in 2548 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qftA/nostruct-align/1qftA.t2k.a2m.gz
# 1qftA.t2k.a2m with 14 sequences, total weight= 12.6554 avg weight= 0.903959 16 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qftA/info/1qftA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qftA/nostruct-align/1qftA.t2k.a2m.gz, have 578736 columns in 2549 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u2hA/nostruct-align/1u2hA.t2k.a2m.gz
# 1u2hA.t2k.a2m with 10282 sequences, total weight= 10282 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.084 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u2hA/info/1u2hA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1u2hA/nostruct-align/1u2hA.t2k.a2m.gz, have 578832 columns in 2550 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2i5hA/nostruct-align/2i5hA.t2k.a2m.gz
# 2i5hA.t2k.a2m with 39 sequences, total weight= 10.8175 avg weight= 0.277371 27 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2i5hA/info/2i5hA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2i5hA/nostruct-align/2i5hA.t2k.a2m.gz, have 579010 columns in 2551 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nqjA/nostruct-align/1nqjA.t2k.a2m.gz
# 1nqjA.t2k.a2m with 61 sequences, total weight= 51.2135 avg weight= 0.839565 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nqjA/info/1nqjA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nqjA/nostruct-align/1nqjA.t2k.a2m.gz, have 579106 columns in 2552 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dtdB/nostruct-align/1dtdB.t2k.a2m.gz
# 1dtdB.t2k.a2m with 5 sequences, total weight= 1.65309 avg weight= 0.330618 8 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dtdB/info/1dtdB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dtdB/nostruct-align/1dtdB.t2k.a2m.gz, have 579167 columns in 2553 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xkpC/nostruct-align/1xkpC.t2k.a2m.gz
# 1xkpC.t2k.a2m with 14 sequences, total weight= 4.99592 avg weight= 0.356851 18 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xkpC/info/1xkpC.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xkpC/nostruct-align/1xkpC.t2k.a2m.gz, have 579293 columns in 2554 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gc9A/nostruct-align/2gc9A.t2k.a2m.gz
# 2gc9A.t2k.a2m with 32 sequences, total weight= 6.99906 avg weight= 0.21872 18 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gc9A/info/2gc9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gc9A/nostruct-align/2gc9A.t2k.a2m.gz, have 579471 columns in 2555 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1inlA/nostruct-align/1inlA.t2k.a2m.gz
# 1inlA.t2k.a2m with 301 sequences, total weight= 301 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27257 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1inlA/info/1inlA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1inlA/nostruct-align/1inlA.t2k.a2m.gz, have 579756 columns in 2556 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zvzB/nostruct-align/1zvzB.t2k.a2m.gz
# 1zvzB.t2k.a2m with 6 sequences, total weight= 2.01987 avg weight= 0.336645 9 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zvzB/info/1zvzB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zvzB/nostruct-align/1zvzB.t2k.a2m.gz, have 579778 columns in 2557 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2ictA/nostruct-align/2ictA.t2k.a2m.gz
# 2ictA.t2k.a2m with 292 sequences, total weight= 43.765 avg weight= 0.14988 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2ictA/info/2ictA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2ictA/nostruct-align/2ictA.t2k.a2m.gz, have 579872 columns in 2558 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bo9B/nostruct-align/2bo9B.t2k.a2m.gz
# 2bo9B.t2k.a2m with 24 sequences, total weight= 7.09174 avg weight= 0.295489 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bo9B/info/2bo9B.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bo9B/nostruct-align/2bo9B.t2k.a2m.gz, have 580089 columns in 2559 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q5zA/nostruct-align/1q5zA.t2k.a2m.gz
# 1q5zA.t2k.a2m with 9 sequences, total weight= 1.87048 avg weight= 0.207831 8 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q5zA/info/1q5zA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1q5zA/nostruct-align/1q5zA.t2k.a2m.gz, have 580234 columns in 2560 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2jepA/nostruct-align/2jepA.t2k.a2m.gz
# 2jepA.t2k.a2m with 334 sequences, total weight= 334 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.971772 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2jepA/info/2jepA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2jepA/nostruct-align/2jepA.t2k.a2m.gz, have 580597 columns in 2561 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cxqA/nostruct-align/1cxqA.t2k.a2m.gz
# 1cxqA.t2k.a2m with 1577 sequences, total weight= 1577 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29881 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cxqA/info/1cxqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1cxqA/nostruct-align/1cxqA.t2k.a2m.gz, have 580740 columns in 2562 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1elvA/nostruct-align/1elvA.t2k.a2m.gz
# 1elvA.t2k.a2m with 1783 sequences, total weight= 1783 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21329 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1elvA/info/1elvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1elvA/nostruct-align/1elvA.t2k.a2m.gz, have 581043 columns in 2563 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1z67A/nostruct-align/1z67A.t2k.a2m.gz
# 1z67A.t2k.a2m with 43 sequences, total weight= 17.5116 avg weight= 0.407247 32 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1z67A/info/1z67A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1z67A/nostruct-align/1z67A.t2k.a2m.gz, have 581170 columns in 2564 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1irdB/nostruct-align/1irdB.t2k.a2m.gz
# 1irdB.t2k.a2m with 1407 sequences, total weight= 62.2613 avg weight= 0.0442511 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30345 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1irdB/info/1irdB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1irdB/nostruct-align/1irdB.t2k.a2m.gz, have 581316 columns in 2565 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xqaA/nostruct-align/1xqaA.t2k.a2m.gz
# 1xqaA.t2k.a2m with 310 sequences, total weight= 310 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10594 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xqaA/info/1xqaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xqaA/nostruct-align/1xqaA.t2k.a2m.gz, have 581428 columns in 2566 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xsvA/nostruct-align/1xsvA.t2k.a2m.gz
# 1xsvA.t2k.a2m with 50 sequences, total weight= 12.2886 avg weight= 0.245772 32 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xsvA/info/1xsvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xsvA/nostruct-align/1xsvA.t2k.a2m.gz, have 581534 columns in 2567 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2imsA/nostruct-align/2imsA.t2k.a2m.gz
# 2imsA.t2k.a2m with 320 sequences, total weight= 222.872 avg weight= 0.696476 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30172 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2imsA/info/2imsA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2imsA/nostruct-align/2imsA.t2k.a2m.gz, have 581697 columns in 2568 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sx5A/nostruct-align/1sx5A.t2k.a2m.gz
# 1sx5A.t2k.a2m with 14 sequences, total weight= 5.54896 avg weight= 0.396354 15 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sx5A/info/1sx5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1sx5A/nostruct-align/1sx5A.t2k.a2m.gz, have 581941 columns in 2569 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1twdA/nostruct-align/1twdA.t2k.a2m.gz
# 1twdA.t2k.a2m with 92 sequences, total weight= 18.0934 avg weight= 0.196668 38 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1twdA/info/1twdA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1twdA/nostruct-align/1twdA.t2k.a2m.gz, have 582175 columns in 2570 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hazA/nostruct-align/2hazA.t2k.a2m.gz
# 2hazA.t2k.a2m with 5797 sequences, total weight= 5797 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03802 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hazA/info/2hazA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hazA/nostruct-align/2hazA.t2k.a2m.gz, have 582279 columns in 2571 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fs5A/nostruct-align/1fs5A.t2k.a2m.gz
# 1fs5A.t2k.a2m with 206 sequences, total weight= 56.4192 avg weight= 0.27388 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fs5A/info/1fs5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fs5A/nostruct-align/1fs5A.t2k.a2m.gz, have 582545 columns in 2572 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2igd/nostruct-align/2igd.t2k.a2m.gz
# 2igd.t2k.a2m with 36 sequences, total weight= 3.39489 avg weight= 0.0943026 14 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2igd/info/2igd.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2igd/nostruct-align/2igd.t2k.a2m.gz, have 582606 columns in 2573 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lc0A/nostruct-align/1lc0A.t2k.a2m.gz
# 1lc0A.t2k.a2m with 344 sequences, total weight= 344 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12443 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lc0A/info/1lc0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lc0A/nostruct-align/1lc0A.t2k.a2m.gz, have 582896 columns in 2574 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w8oA/nostruct-align/1w8oA.t2k.a2m.gz
# 1w8oA.t2k.a2m with 317 sequences, total weight= 317 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.986292 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w8oA/info/1w8oA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w8oA/nostruct-align/1w8oA.t2k.a2m.gz, have 583497 columns in 2575 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zklA/nostruct-align/1zklA.t2k.a2m.gz
# 1zklA.t2k.a2m with 666 sequences, total weight= 96.8881 avg weight= 0.145478 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30337 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zklA/info/1zklA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zklA/nostruct-align/1zklA.t2k.a2m.gz, have 583814 columns in 2576 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2ic2A/nostruct-align/2ic2A.t2k.a2m.gz
# 2ic2A.t2k.a2m with 5598 sequences, total weight= 5598 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03156 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2ic2A/info/2ic2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2ic2A/nostruct-align/2ic2A.t2k.a2m.gz, have 583918 columns in 2577 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2p/2p1gA/nostruct-align/2p1gA.t2k.a2m.gz
# 2p1gA.t2k.a2m with 63 sequences, total weight= 29.2098 avg weight= 0.463647 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2p/2p1gA/info/2p1gA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2p/2p1gA/nostruct-align/2p1gA.t2k.a2m.gz, have 584147 columns in 2578 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ursA/nostruct-align/1ursA.t2k.a2m.gz
# 1ursA.t2k.a2m with 490 sequences, total weight= 490 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.949102 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ursA/info/1ursA.stride-mixed.strand_sep
WARNING: skipping f, since it is lower case.
# After reading /projects/compbio/experiments/models.97/pdb/1u/1ursA/nostruct-align/1ursA.t2k.a2m.gz, have 584513 columns in 2579 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q35A/nostruct-align/1q35A.t2k.a2m.gz
# 1q35A.t2k.a2m with 344 sequences, total weight= 344 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12058 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q35A/info/1q35A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1q35A/nostruct-align/1q35A.t2k.a2m.gz, have 584830 columns in 2580 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cpgA/nostruct-align/2cpgA.t2k.a2m.gz
# 2cpgA.t2k.a2m with 6 sequences, total weight= 2.03441 avg weight= 0.339068 8 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cpgA/info/2cpgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cpgA/nostruct-align/2cpgA.t2k.a2m.gz, have 584873 columns in 2581 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mctI/nostruct-align/1mctI.t2k.a2m.gz
# 1mctI.t2k.a2m with 15 sequences, total weight= 1.83371 avg weight= 0.122248 11 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mctI/info/1mctI.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mctI/nostruct-align/1mctI.t2k.a2m.gz, have 584901 columns in 2582 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1po5A/nostruct-align/1po5A.t2k.a2m.gz
# 1po5A.t2k.a2m with 3469 sequences, total weight= 3469 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05502 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1po5A/info/1po5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1po5A/nostruct-align/1po5A.t2k.a2m.gz, have 585366 columns in 2583 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1psrA/nostruct-align/1psrA.t2k.a2m.gz
# 1psrA.t2k.a2m with 410 sequences, total weight= 130.515 avg weight= 0.318329 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30063 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1psrA/info/1psrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1psrA/nostruct-align/1psrA.t2k.a2m.gz, have 585466 columns in 2584 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2g3rA/nostruct-align/2g3rA.t2k.a2m.gz
# 2g3rA.t2k.a2m with 42 sequences, total weight= 4.53432 avg weight= 0.10796 16 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2g3rA/info/2g3rA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2g3rA/nostruct-align/2g3rA.t2k.a2m.gz, have 585585 columns in 2585 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1msoA/nostruct-align/1msoA.t2k.a2m.gz
# 1msoA.t2k.a2m with 176 sequences, total weight= 2.40713 avg weight= 0.0136769 19 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1msoA/info/1msoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1msoA/nostruct-align/1msoA.t2k.a2m.gz, have 585606 columns in 2586 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kzfA/nostruct-align/1kzfA.t2k.a2m.gz
# 1kzfA.t2k.a2m with 104 sequences, total weight= 33.3079 avg weight= 0.320268 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kzfA/info/1kzfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kzfA/nostruct-align/1kzfA.t2k.a2m.gz, have 585804 columns in 2587 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vhh/nostruct-align/1vhh.t2k.a2m.gz
# 1vhh.t2k.a2m with 101 sequences, total weight= 4.04453 avg weight= 0.0400449 17 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vhh/info/1vhh.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vhh/nostruct-align/1vhh.t2k.a2m.gz, have 585961 columns in 2588 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o1zA/nostruct-align/1o1zA.t2k.a2m.gz
# 1o1zA.t2k.a2m with 299 sequences, total weight= 299 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17741 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o1zA/info/1o1zA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1o1zA/nostruct-align/1o1zA.t2k.a2m.gz, have 586187 columns in 2589 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gkgA/nostruct-align/2gkgA.t2k.a2m.gz
# 2gkgA.t2k.a2m with 14408 sequences, total weight= 4154.86 avg weight= 0.288372 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3416 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gkgA/info/2gkgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gkgA/nostruct-align/2gkgA.t2k.a2m.gz, have 586309 columns in 2590 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zgzA/nostruct-align/1zgzA.t2k.a2m.gz
# 1zgzA.t2k.a2m with 13271 sequences, total weight= 12101.3 avg weight= 0.911862 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30315 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zgzA/info/1zgzA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zgzA/nostruct-align/1zgzA.t2k.a2m.gz, have 586430 columns in 2591 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bs2A/nostruct-align/2bs2A.t2k.a2m.gz
# 2bs2A.t2k.a2m with 1660 sequences, total weight= 395.858 avg weight= 0.238468 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31105 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bs2A/info/2bs2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bs2A/nostruct-align/2bs2A.t2k.a2m.gz, have 587085 columns in 2592 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f5vA/nostruct-align/1f5vA.t2k.a2m.gz
# 1f5vA.t2k.a2m with 220 sequences, total weight= 164.811 avg weight= 0.74914 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30084 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f5vA/info/1f5vA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1f5vA/nostruct-align/1f5vA.t2k.a2m.gz, have 587325 columns in 2593 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rvkA/nostruct-align/1rvkA.t2k.a2m.gz
# 1rvkA.t2k.a2m with 574 sequences, total weight= 574 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29807 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rvkA/info/1rvkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rvkA/nostruct-align/1rvkA.t2k.a2m.gz, have 587706 columns in 2594 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tq5A/nostruct-align/1tq5A.t2k.a2m.gz
# 1tq5A.t2k.a2m with 407 sequences, total weight= 84.2782 avg weight= 0.207072 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30233 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tq5A/info/1tq5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tq5A/nostruct-align/1tq5A.t2k.a2m.gz, have 587940 columns in 2595 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2jaeA/nostruct-align/2jaeA.t2k.a2m.gz
# 2jaeA.t2k.a2m with 9595 sequences, total weight= 9595 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.609881 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2jaeA/info/2jaeA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2jaeA/nostruct-align/2jaeA.t2k.a2m.gz, have 588418 columns in 2596 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2dg5A/nostruct-align/2dg5A.t2k.a2m.gz
# 2dg5A.t2k.a2m with 725 sequences, total weight= 90.5751 avg weight= 0.124931 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30401 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2dg5A/info/2dg5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2dg5A/nostruct-align/2dg5A.t2k.a2m.gz, have 588769 columns in 2597 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fcqA/nostruct-align/1fcqA.t2k.a2m.gz
# 1fcqA.t2k.a2m with 83 sequences, total weight= 8.71815 avg weight= 0.105038 32 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fcqA/info/1fcqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fcqA/nostruct-align/1fcqA.t2k.a2m.gz, have 589083 columns in 2598 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2jdcA/nostruct-align/2jdcA.t2k.a2m.gz
# 2jdcA.t2k.a2m with 1012 sequences, total weight= 1012 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05124 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2jdcA/info/2jdcA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2jdcA/nostruct-align/2jdcA.t2k.a2m.gz, have 589228 columns in 2599 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pbyB/nostruct-align/1pbyB.t2k.a2m.gz
# 1pbyB.t2k.a2m with 138 sequences, total weight= 138 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10586 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pbyB/info/1pbyB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pbyB/nostruct-align/1pbyB.t2k.a2m.gz, have 589565 columns in 2600 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54C/nostruct-align/1v54C.t2k.a2m.gz
# 1v54C.t2k.a2m with 1572 sequences, total weight= 51.4213 avg weight= 0.0327108 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54C/info/1v54C.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v54C/nostruct-align/1v54C.t2k.a2m.gz, have 589824 columns in 2601 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b3aA/nostruct-align/1b3aA.t2k.a2m.gz
# 1b3aA.t2k.a2m with 410 sequences, total weight= 54.8512 avg weight= 0.133783 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b3aA/info/1b3aA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1b3aA/nostruct-align/1b3aA.t2k.a2m.gz, have 589891 columns in 2602 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pb7A/nostruct-align/1pb7A.t2k.a2m.gz
# 1pb7A.t2k.a2m with 841 sequences, total weight= 841 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22468 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pb7A/info/1pb7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pb7A/nostruct-align/1pb7A.t2k.a2m.gz, have 590172 columns in 2603 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dhn/nostruct-align/1dhn.t2k.a2m.gz
# 1dhn.t2k.a2m with 145 sequences, total weight= 39.2158 avg weight= 0.270454 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dhn/info/1dhn.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dhn/nostruct-align/1dhn.t2k.a2m.gz, have 590293 columns in 2604 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dqzA/nostruct-align/1dqzA.t2k.a2m.gz
# 1dqzA.t2k.a2m with 179 sequences, total weight= 142.833 avg weight= 0.797948 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30043 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dqzA/info/1dqzA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dqzA/nostruct-align/1dqzA.t2k.a2m.gz, have 590573 columns in 2605 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n45A/nostruct-align/1n45A.t2k.a2m.gz
# 1n45A.t2k.a2m with 88 sequences, total weight= 25.3652 avg weight= 0.288241 39 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n45A/info/1n45A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1n45A/nostruct-align/1n45A.t2k.a2m.gz, have 590787 columns in 2606 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lb3A/nostruct-align/1lb3A.t2k.a2m.gz
# 1lb3A.t2k.a2m with 282 sequences, total weight= 62.7955 avg weight= 0.222679 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lb3A/info/1lb3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lb3A/nostruct-align/1lb3A.t2k.a2m.gz, have 590954 columns in 2607 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vcdA/nostruct-align/1vcdA.t2k.a2m.gz
# 1vcdA.t2k.a2m with 1961 sequences, total weight= 1961 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16935 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vcdA/info/1vcdA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vcdA/nostruct-align/1vcdA.t2k.a2m.gz, have 591080 columns in 2608 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2g7eA/nostruct-align/2g7eA.t2k.a2m.gz
# 2g7eA.t2k.a2m with 199 sequences, total weight= 53.4558 avg weight= 0.268622 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2g7eA/info/2g7eA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2g7eA/nostruct-align/2g7eA.t2k.a2m.gz, have 591287 columns in 2609 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2i6cA/nostruct-align/2i6cA.t2k.a2m.gz
# 2i6cA.t2k.a2m with 1201 sequences, total weight= 1201 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.99584 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2i6cA/info/2i6cA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2i6cA/nostruct-align/2i6cA.t2k.a2m.gz, have 591447 columns in 2610 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2dxaA/nostruct-align/2dxaA.t2k.a2m.gz
# 2dxaA.t2k.a2m with 524 sequences, total weight= 76.7197 avg weight= 0.146412 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30296 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2dxaA/info/2dxaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2dxaA/nostruct-align/2dxaA.t2k.a2m.gz, have 591605 columns in 2611 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rkuA/nostruct-align/1rkuA.t2k.a2m.gz
# 1rkuA.t2k.a2m with 254 sequences, total weight= 106.475 avg weight= 0.419193 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30053 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rkuA/info/1rkuA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rkuA/nostruct-align/1rkuA.t2k.a2m.gz, have 591811 columns in 2612 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2oo1A/nostruct-align/2oo1A.t2k.a2m.gz
# 2oo1A.t2k.a2m with 2640 sequences, total weight= 315.747 avg weight= 0.119601 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32139 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2oo1A/info/2oo1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2oo1A/nostruct-align/2oo1A.t2k.a2m.gz, have 591921 columns in 2613 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bf9A/nostruct-align/2bf9A.t2k.a2m.gz
# 2bf9A.t2k.a2m with 123 sequences, total weight= 4.92217 avg weight= 0.0400177 22 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bf9A/info/2bf9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bf9A/nostruct-align/2bf9A.t2k.a2m.gz, have 591957 columns in 2614 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bzvA/nostruct-align/2bzvA.t2k.a2m.gz
# 2bzvA.t2k.a2m with 94 sequences, total weight= 20.5567 avg weight= 0.218688 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bzvA/info/2bzvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bzvA/nostruct-align/2bzvA.t2k.a2m.gz, have 592103 columns in 2615 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r1tA/nostruct-align/1r1tA.t2k.a2m.gz
# 1r1tA.t2k.a2m with 763 sequences, total weight= 108.806 avg weight= 0.142603 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30061 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r1tA/info/1r1tA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r1tA/nostruct-align/1r1tA.t2k.a2m.gz, have 592201 columns in 2616 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2od4A/nostruct-align/2od4A.t2k.a2m.gz
# 2od4A.t2k.a2m with 2 sequences, total weight= 1.92582 avg weight= 0.962911 7 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2od4A/info/2od4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2od4A/nostruct-align/2od4A.t2k.a2m.gz, have 592302 columns in 2617 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fmmA/nostruct-align/2fmmA.t2k.a2m.gz
# 2fmmA.t2k.a2m with 221 sequences, total weight= 19.1287 avg weight= 0.0865552 31 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fmmA/info/2fmmA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fmmA/nostruct-align/2fmmA.t2k.a2m.gz, have 592370 columns in 2618 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2c5aA/nostruct-align/2c5aA.t2k.a2m.gz
# 2c5aA.t2k.a2m with 3262 sequences, total weight= 3262 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19303 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2c5aA/info/2c5aA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2c5aA/nostruct-align/2c5aA.t2k.a2m.gz, have 592733 columns in 2619 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1ks8A/nostruct-align/1ks8A.t2k.a2m.gz
# 1ks8A.t2k.a2m with 252 sequences, total weight= 47.4232 avg weight= 0.188187 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1ks8A/info/1ks8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1ks8A/nostruct-align/1ks8A.t2k.a2m.gz, have 593166 columns in 2620 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uteA/nostruct-align/1uteA.t2k.a2m.gz
# 1uteA.t2k.a2m with 181 sequences, total weight= 181 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.944031 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uteA/info/1uteA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uteA/nostruct-align/1uteA.t2k.a2m.gz, have 593468 columns in 2621 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gibA/nostruct-align/2gibA.t2k.a2m.gz
# 2gibA.t2k.a2m with 218 sequences, total weight= 9.57253 avg weight= 0.0439107 26 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gibA/info/2gibA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gibA/nostruct-align/2gibA.t2k.a2m.gz, have 593565 columns in 2622 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vkiA/nostruct-align/1vkiA.t2k.a2m.gz
# 1vkiA.t2k.a2m with 65 sequences, total weight= 49.1796 avg weight= 0.756609 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vkiA/info/1vkiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vkiA/nostruct-align/1vkiA.t2k.a2m.gz, have 593730 columns in 2623 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ou8A/nostruct-align/1ou8A.t2k.a2m.gz
# 1ou8A.t2k.a2m with 46 sequences, total weight= 7.13042 avg weight= 0.155009 24 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ou8A/info/1ou8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1ou8A/nostruct-align/1ou8A.t2k.a2m.gz, have 593836 columns in 2624 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gf9A/nostruct-align/2gf9A.t2k.a2m.gz
# 2gf9A.t2k.a2m with 6632 sequences, total weight= 3293.58 avg weight= 0.49662 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32197 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gf9A/info/2gf9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gf9A/nostruct-align/2gf9A.t2k.a2m.gz, have 594012 columns in 2625 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2ghtA/nostruct-align/2ghtA.t2k.a2m.gz
# 2ghtA.t2k.a2m with 562 sequences, total weight= 118.181 avg weight= 0.210287 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30403 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2ghtA/info/2ghtA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2ghtA/nostruct-align/2ghtA.t2k.a2m.gz, have 594192 columns in 2626 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1im5A/nostruct-align/1im5A.t2k.a2m.gz
# 1im5A.t2k.a2m with 459 sequences, total weight= 459 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17871 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1im5A/info/1im5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1im5A/nostruct-align/1im5A.t2k.a2m.gz, have 594371 columns in 2627 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g2yA/nostruct-align/1g2yA.t2k.a2m.gz
# 1g2yA.t2k.a2m with 14 sequences, total weight= 1.97491 avg weight= 0.141065 8 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g2yA/info/1g2yA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1g2yA/nostruct-align/1g2yA.t2k.a2m.gz, have 594402 columns in 2628 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xfkA/nostruct-align/1xfkA.t2k.a2m.gz
# 1xfkA.t2k.a2m with 349 sequences, total weight= 160.265 avg weight= 0.459211 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30223 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xfkA/info/1xfkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xfkA/nostruct-align/1xfkA.t2k.a2m.gz, have 594726 columns in 2629 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h4aX/nostruct-align/1h4aX.t2k.a2m.gz
# 1h4aX.t2k.a2m with 225 sequences, total weight= 23.0109 avg weight= 0.102271 39 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h4aX/info/1h4aX.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h4aX/nostruct-align/1h4aX.t2k.a2m.gz, have 594899 columns in 2630 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oywA/nostruct-align/1oywA.t2k.a2m.gz
# 1oywA.t2k.a2m with 3005 sequences, total weight= 3005 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.997605 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oywA/info/1oywA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oywA/nostruct-align/1oywA.t2k.a2m.gz, have 595415 columns in 2631 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eyvA/nostruct-align/1eyvA.t2k.a2m.gz
# 1eyvA.t2k.a2m with 205 sequences, total weight= 108.619 avg weight= 0.529848 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30124 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eyvA/info/1eyvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1eyvA/nostruct-align/1eyvA.t2k.a2m.gz, have 595546 columns in 2632 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f7lA/nostruct-align/1f7lA.t2k.a2m.gz
# 1f7lA.t2k.a2m with 167 sequences, total weight= 67.6405 avg weight= 0.405033 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30048 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f7lA/info/1f7lA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1f7lA/nostruct-align/1f7lA.t2k.a2m.gz, have 595664 columns in 2633 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2g2cA/nostruct-align/2g2cA.t2k.a2m.gz
# 2g2cA.t2k.a2m with 496 sequences, total weight= 75.6032 avg weight= 0.152426 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30142 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2g2cA/info/2g2cA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2g2cA/nostruct-align/2g2cA.t2k.a2m.gz, have 595816 columns in 2634 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s69A/nostruct-align/1s69A.t2k.a2m.gz
# 1s69A.t2k.a2m with 81 sequences, total weight= 30.2978 avg weight= 0.374047 42 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s69A/info/1s69A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1s69A/nostruct-align/1s69A.t2k.a2m.gz, have 595939 columns in 2635 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bmwA/nostruct-align/2bmwA.t2k.a2m.gz
# 2bmwA.t2k.a2m with 2505 sequences, total weight= 2505 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06575 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bmwA/info/2bmwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bmwA/nostruct-align/2bmwA.t2k.a2m.gz, have 596234 columns in 2636 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ey4A/nostruct-align/1ey4A.t2k.a2m.gz
# 1ey4A.t2k.a2m with 247 sequences, total weight= 172.592 avg weight= 0.698753 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30144 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ey4A/info/1ey4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1ey4A/nostruct-align/1ey4A.t2k.a2m.gz, have 596370 columns in 2637 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kdgA/nostruct-align/1kdgA.t2k.a2m.gz
# 1kdgA.t2k.a2m with 1404 sequences, total weight= 1404 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.782218 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kdgA/info/1kdgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kdgA/nostruct-align/1kdgA.t2k.a2m.gz, have 596911 columns in 2638 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ep0A/nostruct-align/1ep0A.t2k.a2m.gz
# 1ep0A.t2k.a2m with 250 sequences, total weight= 27.9148 avg weight= 0.111659 45 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ep0A/info/1ep0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1ep0A/nostruct-align/1ep0A.t2k.a2m.gz, have 597094 columns in 2639 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1so7A/nostruct-align/1so7A.t2k.a2m.gz
# 1so7A.t2k.a2m with 105 sequences, total weight= 50.5346 avg weight= 0.481282 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1so7A/info/1so7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1so7A/nostruct-align/1so7A.t2k.a2m.gz, have 597455 columns in 2640 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a9xB/nostruct-align/1a9xB.t2k.a2m.gz
# 1a9xB.t2k.a2m with 535 sequences, total weight= 117.473 avg weight= 0.219576 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30176 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a9xB/info/1a9xB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1a9xB/nostruct-align/1a9xB.t2k.a2m.gz, have 597834 columns in 2641 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ynbA/nostruct-align/1ynbA.t2k.a2m.gz
# 1ynbA.t2k.a2m with 143 sequences, total weight= 65.1345 avg weight= 0.455486 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ynbA/info/1ynbA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1ynbA/nostruct-align/1ynbA.t2k.a2m.gz, have 598001 columns in 2642 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mh1/nostruct-align/1mh1.t2k.a2m.gz
# 1mh1.t2k.a2m with 1600 sequences, total weight= 308.341 avg weight= 0.192713 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32381 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mh1/info/1mh1.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mh1/nostruct-align/1mh1.t2k.a2m.gz, have 598184 columns in 2643 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gtkA/nostruct-align/1gtkA.t2k.a2m.gz
# 1gtkA.t2k.a2m with 168 sequences, total weight= 16.7119 avg weight= 0.0994755 41 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gtkA/info/1gtkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gtkA/nostruct-align/1gtkA.t2k.a2m.gz, have 598478 columns in 2644 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t3qC/nostruct-align/1t3qC.t2k.a2m.gz
# 1t3qC.t2k.a2m with 442 sequences, total weight= 92.2389 avg weight= 0.208685 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30277 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t3qC/info/1t3qC.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1t3qC/nostruct-align/1t3qC.t2k.a2m.gz, have 598763 columns in 2645 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1deuA/nostruct-align/1deuA.t2k.a2m.gz
# 1deuA.t2k.a2m with 707 sequences, total weight= 109.82 avg weight= 0.155333 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30283 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1deuA/info/1deuA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1deuA/nostruct-align/1deuA.t2k.a2m.gz, have 599038 columns in 2646 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i9zA/nostruct-align/1i9zA.t2k.a2m.gz
# 1i9zA.t2k.a2m with 200 sequences, total weight= 59.0534 avg weight= 0.295267 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30033 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i9zA/info/1i9zA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1i9zA/nostruct-align/1i9zA.t2k.a2m.gz, have 599374 columns in 2647 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eexB/nostruct-align/1eexB.t2k.a2m.gz
# 1eexB.t2k.a2m with 34 sequences, total weight= 7.56202 avg weight= 0.222412 19 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eexB/info/1eexB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1eexB/nostruct-align/1eexB.t2k.a2m.gz, have 599552 columns in 2648 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h16A/nostruct-align/1h16A.t2k.a2m.gz
# 1h16A.t2k.a2m with 123 sequences, total weight= 31.3945 avg weight= 0.25524 39 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h16A/info/1h16A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h16A/nostruct-align/1h16A.t2k.a2m.gz, have 600311 columns in 2649 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ygtA/nostruct-align/1ygtA.t2k.a2m.gz
# 1ygtA.t2k.a2m with 109 sequences, total weight= 34.1436 avg weight= 0.313244 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ygtA/info/1ygtA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1ygtA/nostruct-align/1ygtA.t2k.a2m.gz, have 600415 columns in 2650 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mz9A/nostruct-align/1mz9A.t2k.a2m.gz
# 1mz9A.t2k.a2m with 23 sequences, total weight= 3.77698 avg weight= 0.164217 17 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mz9A/info/1mz9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mz9A/nostruct-align/1mz9A.t2k.a2m.gz, have 600460 columns in 2651 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2h2tB/nostruct-align/2h2tB.t2k.a2m.gz
# 2h2tB.t2k.a2m with 3268 sequences, total weight= 3268 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15201 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2h2tB/info/2h2tB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2h2tB/nostruct-align/2h2tB.t2k.a2m.gz, have 600584 columns in 2652 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w9iA/nostruct-align/1w9iA.t2k.a2m.gz
# 1w9iA.t2k.a2m with 1914 sequences, total weight= 96.5376 avg weight= 0.0504376 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30433 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w9iA/info/1w9iA.stride-mixed.strand_sep
WARNING: skipping f, since it is lower case.
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w9iA/nostruct-align/1w9iA.t2k.a2m.gz, have 601286 columns in 2653 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wkqA/nostruct-align/1wkqA.t2k.a2m.gz
# 1wkqA.t2k.a2m with 605 sequences, total weight= 203.558 avg weight= 0.33646 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30476 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wkqA/info/1wkqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wkqA/nostruct-align/1wkqA.t2k.a2m.gz, have 601444 columns in 2654 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vhtA/nostruct-align/1vhtA.t2k.a2m.gz
# 1vhtA.t2k.a2m with 275 sequences, total weight= 148.813 avg weight= 0.541138 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vhtA/info/1vhtA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vhtA/nostruct-align/1vhtA.t2k.a2m.gz, have 601652 columns in 2655 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wbhA/nostruct-align/1wbhA.t2k.a2m.gz
# 1wbhA.t2k.a2m with 377 sequences, total weight= 43.5422 avg weight= 0.115497 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3003 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wbhA/info/1wbhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wbhA/nostruct-align/1wbhA.t2k.a2m.gz, have 601865 columns in 2656 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2ahfA/nostruct-align/2ahfA.t2k.a2m.gz
# 2ahfA.t2k.a2m with 89 sequences, total weight= 81.7868 avg weight= 0.918953 45 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2ahfA/info/2ahfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2ahfA/nostruct-align/2ahfA.t2k.a2m.gz, have 602242 columns in 2657 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nrzA/nostruct-align/1nrzA.t2k.a2m.gz
# 1nrzA.t2k.a2m with 89 sequences, total weight= 20.1483 avg weight= 0.226386 39 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nrzA/info/1nrzA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nrzA/nostruct-align/1nrzA.t2k.a2m.gz, have 602405 columns in 2658 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i2tA/nostruct-align/1i2tA.t2k.a2m.gz
# 1i2tA.t2k.a2m with 123 sequences, total weight= 7.22302 avg weight= 0.0587238 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i2tA/info/1i2tA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1i2tA/nostruct-align/1i2tA.t2k.a2m.gz, have 602466 columns in 2659 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hueB/nostruct-align/2hueB.t2k.a2m.gz
# 2hueB.t2k.a2m with 1326 sequences, total weight= 13.7319 avg weight= 0.0103559 31 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hueB/info/2hueB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hueB/nostruct-align/2hueB.t2k.a2m.gz, have 602541 columns in 2660 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54G/nostruct-align/1v54G.t2k.a2m.gz
# 1v54G.t2k.a2m with 41 sequences, total weight= 7.76683 avg weight= 0.189435 22 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54G/info/1v54G.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v54G/nostruct-align/1v54G.t2k.a2m.gz, have 602625 columns in 2661 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2b18A/nostruct-align/2b18A.t2k.a2m.gz
# 2b18A.t2k.a2m with 59 sequences, total weight= 12.0989 avg weight= 0.205067 30 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2b18A/info/2b18A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2b18A/nostruct-align/2b18A.t2k.a2m.gz, have 602780 columns in 2662 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tx4A/nostruct-align/1tx4A.t2k.a2m.gz
# 1tx4A.t2k.a2m with 363 sequences, total weight= 250.879 avg weight= 0.691126 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30446 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tx4A/info/1tx4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tx4A/nostruct-align/1tx4A.t2k.a2m.gz, have 602976 columns in 2663 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w2wA/nostruct-align/1w2wA.t2k.a2m.gz
# 1w2wA.t2k.a2m with 129 sequences, total weight= 22.7948 avg weight= 0.176704 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w2wA/info/1w2wA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w2wA/nostruct-align/1w2wA.t2k.a2m.gz, have 603187 columns in 2664 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1auoA/nostruct-align/1auoA.t2k.a2m.gz
# 1auoA.t2k.a2m with 372 sequences, total weight= 372 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.940248 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1auoA/info/1auoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1auoA/nostruct-align/1auoA.t2k.a2m.gz, have 603405 columns in 2665 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r0mA/nostruct-align/1r0mA.t2k.a2m.gz
# 1r0mA.t2k.a2m with 668 sequences, total weight= 668 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2064 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r0mA/info/1r0mA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r0mA/nostruct-align/1r0mA.t2k.a2m.gz, have 603765 columns in 2666 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cygA/nostruct-align/2cygA.t2k.a2m.gz
# 2cygA.t2k.a2m with 513 sequences, total weight= 65.2366 avg weight= 0.127167 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30058 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cygA/info/2cygA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cygA/nostruct-align/2cygA.t2k.a2m.gz, have 604077 columns in 2667 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1utg/nostruct-align/1utg.t2k.a2m.gz
# 1utg.t2k.a2m with 70 sequences, total weight= 11.0108 avg weight= 0.157297 29 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1utg/info/1utg.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1utg/nostruct-align/1utg.t2k.a2m.gz, have 604147 columns in 2668 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n62A/nostruct-align/1n62A.t2k.a2m.gz
# 1n62A.t2k.a2m with 332 sequences, total weight= 19.3667 avg weight= 0.0583335 44 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n62A/info/1n62A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1n62A/nostruct-align/1n62A.t2k.a2m.gz, have 604308 columns in 2669 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sbyA/nostruct-align/1sbyA.t2k.a2m.gz
# 1sbyA.t2k.a2m with 6563 sequences, total weight= 5839.97 avg weight= 0.889832 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30367 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sbyA/info/1sbyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1sbyA/nostruct-align/1sbyA.t2k.a2m.gz, have 604562 columns in 2670 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ootA/nostruct-align/1ootA.t2k.a2m.gz
# 1ootA.t2k.a2m with 1837 sequences, total weight= 42.6149 avg weight= 0.0231981 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30163 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ootA/info/1ootA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1ootA/nostruct-align/1ootA.t2k.a2m.gz, have 604620 columns in 2671 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1omrA/nostruct-align/1omrA.t2k.a2m.gz
# 1omrA.t2k.a2m with 2007 sequences, total weight= 2007 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15654 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1omrA/info/1omrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1omrA/nostruct-align/1omrA.t2k.a2m.gz, have 604821 columns in 2672 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f60A/nostruct-align/1f60A.t2k.a2m.gz
# 1f60A.t2k.a2m with 2861 sequences, total weight= 286.865 avg weight= 0.100267 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.33132 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f60A/info/1f60A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1f60A/nostruct-align/1f60A.t2k.a2m.gz, have 605261 columns in 2673 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2d7cC/nostruct-align/2d7cC.t2k.a2m.gz
# 2d7cC.t2k.a2m with 38 sequences, total weight= 2.36299 avg weight= 0.062184 12 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2d7cC/info/2d7cC.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2d7cC/nostruct-align/2d7cC.t2k.a2m.gz, have 605303 columns in 2674 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fjjA/nostruct-align/1fjjA.t2k.a2m.gz
# 1fjjA.t2k.a2m with 175 sequences, total weight= 87.4785 avg weight= 0.499877 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30051 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fjjA/info/1fjjA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fjjA/nostruct-align/1fjjA.t2k.a2m.gz, have 605462 columns in 2675 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p5dX/nostruct-align/1p5dX.t2k.a2m.gz
# 1p5dX.t2k.a2m with 1157 sequences, total weight= 813.798 avg weight= 0.703369 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30734 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p5dX/info/1p5dX.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1p5dX/nostruct-align/1p5dX.t2k.a2m.gz, have 605917 columns in 2676 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1josA/nostruct-align/1josA.t2k.a2m.gz
# 1josA.t2k.a2m with 155 sequences, total weight= 33.1475 avg weight= 0.213855 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1josA/info/1josA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1josA/nostruct-align/1josA.t2k.a2m.gz, have 606017 columns in 2677 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2culA/nostruct-align/2culA.t2k.a2m.gz
# 2culA.t2k.a2m with 467 sequences, total weight= 12.6932 avg weight= 0.0271803 36 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2culA/info/2culA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2culA/nostruct-align/2culA.t2k.a2m.gz, have 606242 columns in 2678 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2ghsA/nostruct-align/2ghsA.t2k.a2m.gz
# 2ghsA.t2k.a2m with 529 sequences, total weight= 529 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10379 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2ghsA/info/2ghsA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2ghsA/nostruct-align/2ghsA.t2k.a2m.gz, have 606537 columns in 2679 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gu9A/nostruct-align/2gu9A.t2k.a2m.gz
# 2gu9A.t2k.a2m with 1161 sequences, total weight= 1161 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16162 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gu9A/info/2gu9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gu9A/nostruct-align/2gu9A.t2k.a2m.gz, have 606648 columns in 2680 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eg2A/nostruct-align/1eg2A.t2k.a2m.gz
# 1eg2A.t2k.a2m with 299 sequences, total weight= 299 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25928 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eg2A/info/1eg2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1eg2A/nostruct-align/1eg2A.t2k.a2m.gz, have 606918 columns in 2681 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ucsA/nostruct-align/1ucsA.t2k.a2m.gz
# 1ucsA.t2k.a2m with 65 sequences, total weight= 5.18334 avg weight= 0.0797438 20 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ucsA/info/1ucsA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1ucsA/nostruct-align/1ucsA.t2k.a2m.gz, have 606982 columns in 2682 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2czsA/nostruct-align/2czsA.t2k.a2m.gz
# 2czsA.t2k.a2m with 10 sequences, total weight= 3.9205 avg weight= 0.39205 16 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2czsA/info/2czsA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2czsA/nostruct-align/2czsA.t2k.a2m.gz, have 607052 columns in 2683 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rx0A/nostruct-align/1rx0A.t2k.a2m.gz
# 1rx0A.t2k.a2m with 4233 sequences, total weight= 4233 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24433 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rx0A/info/1rx0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rx0A/nostruct-align/1rx0A.t2k.a2m.gz, have 607436 columns in 2684 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gu4A/nostruct-align/1gu4A.t2k.a2m.gz
# 1gu4A.t2k.a2m with 188 sequences, total weight= 15.8046 avg weight= 0.084067 36 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gu4A/info/1gu4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gu4A/nostruct-align/1gu4A.t2k.a2m.gz, have 607501 columns in 2685 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2l/2lisA/nostruct-align/2lisA.t2k.a2m.gz
# 2lisA.t2k.a2m with 34 sequences, total weight= 8.5868 avg weight= 0.252553 23 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2l/2lisA/info/2lisA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2l/2lisA/nostruct-align/2lisA.t2k.a2m.gz, have 607632 columns in 2686 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2c6qA/nostruct-align/2c6qA.t2k.a2m.gz
# 2c6qA.t2k.a2m with 860 sequences, total weight= 218.895 avg weight= 0.25453 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30914 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2c6qA/info/2c6qA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2c6qA/nostruct-align/2c6qA.t2k.a2m.gz, have 607960 columns in 2687 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nvmA/nostruct-align/1nvmA.t2k.a2m.gz
# 1nvmA.t2k.a2m with 515 sequences, total weight= 176.189 avg weight= 0.342114 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30435 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nvmA/info/1nvmA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nvmA/nostruct-align/1nvmA.t2k.a2m.gz, have 608300 columns in 2688 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ra0A/nostruct-align/1ra0A.t2k.a2m.gz
# 1ra0A.t2k.a2m with 294 sequences, total weight= 294 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0683 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ra0A/info/1ra0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1ra0A/nostruct-align/1ra0A.t2k.a2m.gz, have 608723 columns in 2689 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ylxA/nostruct-align/1ylxA.t2k.a2m.gz
# 1ylxA.t2k.a2m with 6 sequences, total weight= 3.56319 avg weight= 0.593866 13 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ylxA/info/1ylxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1ylxA/nostruct-align/1ylxA.t2k.a2m.gz, have 608823 columns in 2690 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m0uA/nostruct-align/1m0uA.t2k.a2m.gz
# 1m0uA.t2k.a2m with 480 sequences, total weight= 480 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29861 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m0uA/info/1m0uA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m0uA/nostruct-align/1m0uA.t2k.a2m.gz, have 609026 columns in 2691 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1egwA/nostruct-align/1egwA.t2k.a2m.gz
# 1egwA.t2k.a2m with 680 sequences, total weight= 13.5371 avg weight= 0.0199075 35 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1egwA/info/1egwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1egwA/nostruct-align/1egwA.t2k.a2m.gz, have 609097 columns in 2692 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1duvG/nostruct-align/1duvG.t2k.a2m.gz
# 1duvG.t2k.a2m with 316 sequences, total weight= 32.2228 avg weight= 0.101971 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1duvG/info/1duvG.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1duvG/nostruct-align/1duvG.t2k.a2m.gz, have 609430 columns in 2693 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rjcA/nostruct-align/1rjcA.t2k.a2m.gz
# 1rjcA.t2k.a2m with 20535 sequences, total weight= 17.3959 avg weight= 0.000847136 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rjcA/info/1rjcA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rjcA/nostruct-align/1rjcA.t2k.a2m.gz, have 609553 columns in 2694 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gb7A/nostruct-align/2gb7A.t2k.a2m.gz
# 2gb7A.t2k.a2m with 36 sequences, total weight= 16.3791 avg weight= 0.454975 23 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gb7A/info/2gb7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gb7A/nostruct-align/2gb7A.t2k.a2m.gz, have 609846 columns in 2695 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i71A/nostruct-align/1i71A.t2k.a2m.gz
# 1i71A.t2k.a2m with 385 sequences, total weight= 17.5087 avg weight= 0.0454771 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i71A/info/1i71A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1i71A/nostruct-align/1i71A.t2k.a2m.gz, have 609929 columns in 2696 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zy7A/nostruct-align/1zy7A.t2k.a2m.gz
# 1zy7A.t2k.a2m with 196 sequences, total weight= 120.496 avg weight= 0.614778 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30077 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zy7A/info/1zy7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zy7A/nostruct-align/1zy7A.t2k.a2m.gz, have 610307 columns in 2697 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pa7A/nostruct-align/1pa7A.t2k.a2m.gz
# 1pa7A.t2k.a2m with 65 sequences, total weight= 9.87455 avg weight= 0.151916 24 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pa7A/info/1pa7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pa7A/nostruct-align/1pa7A.t2k.a2m.gz, have 610437 columns in 2698 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1ptf/nostruct-align/1ptf.t2k.a2m.gz
# 1ptf.t2k.a2m with 233 sequences, total weight= 20.0735 avg weight= 0.0861523 44 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1ptf/info/1ptf.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1ptf/nostruct-align/1ptf.t2k.a2m.gz, have 610524 columns in 2699 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bteA/nostruct-align/1bteA.t2k.a2m.gz
# 1bteA.t2k.a2m with 67 sequences, total weight= 7.96034 avg weight= 0.118811 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bteA/info/1bteA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1bteA/nostruct-align/1bteA.t2k.a2m.gz, have 610616 columns in 2700 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l1lA/nostruct-align/1l1lA.t2k.a2m.gz
# 1l1lA.t2k.a2m with 61 sequences, total weight= 39.7743 avg weight= 0.652038 32 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l1lA/info/1l1lA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1l1lA/nostruct-align/1l1lA.t2k.a2m.gz, have 611333 columns in 2701 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gu2A/nostruct-align/1gu2A.t2k.a2m.gz
# 1gu2A.t2k.a2m with 41 sequences, total weight= 11.5121 avg weight= 0.280782 29 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gu2A/info/1gu2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gu2A/nostruct-align/1gu2A.t2k.a2m.gz, have 611457 columns in 2702 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2a97A/nostruct-align/2a97A.t2k.a2m.gz
# 2a97A.t2k.a2m with 110 sequences, total weight= 11.6209 avg weight= 0.105644 27 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2a97A/info/2a97A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2a97A/nostruct-align/2a97A.t2k.a2m.gz, have 611849 columns in 2703 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kt6A/nostruct-align/1kt6A.t2k.a2m.gz
# 1kt6A.t2k.a2m with 186 sequences, total weight= 186 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21645 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kt6A/info/1kt6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kt6A/nostruct-align/1kt6A.t2k.a2m.gz, have 612024 columns in 2704 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2m/2mhr/nostruct-align/2mhr.t2k.a2m.gz
# 2mhr.t2k.a2m with 107 sequences, total weight= 63.5387 avg weight= 0.59382 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30037 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2m/2mhr/info/2mhr.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2m/2mhr/nostruct-align/2mhr.t2k.a2m.gz, have 612142 columns in 2705 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xppA/nostruct-align/1xppA.t2k.a2m.gz
# 1xppA.t2k.a2m with 133 sequences, total weight= 37.8052 avg weight= 0.284249 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xppA/info/1xppA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xppA/nostruct-align/1xppA.t2k.a2m.gz, have 612241 columns in 2706 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2ozjA/nostruct-align/2ozjA.t2k.a2m.gz
# 2ozjA.t2k.a2m with 316 sequences, total weight= 316 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19385 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2ozjA/info/2ozjA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2ozjA/nostruct-align/2ozjA.t2k.a2m.gz, have 612351 columns in 2707 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2f1nA/nostruct-align/2f1nA.t2k.a2m.gz
# 2f1nA.t2k.a2m with 68 sequences, total weight= 9.50453 avg weight= 0.139772 26 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2f1nA/info/2f1nA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2f1nA/nostruct-align/2f1nA.t2k.a2m.gz, have 612604 columns in 2708 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1io0A/nostruct-align/1io0A.t2k.a2m.gz
# 1io0A.t2k.a2m with 330 sequences, total weight= 330 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20324 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1io0A/info/1io0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1io0A/nostruct-align/1io0A.t2k.a2m.gz, have 612770 columns in 2709 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/8a/8abp/nostruct-align/8abp.t2k.a2m.gz
# 8abp.t2k.a2m with 296 sequences, total weight= 296 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21047 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/8a/8abp/info/8abp.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/8a/8abp/nostruct-align/8abp.t2k.a2m.gz, have 613075 columns in 2710 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n1jA/nostruct-align/1n1jA.t2k.a2m.gz
# 1n1jA.t2k.a2m with 222 sequences, total weight= 42.3294 avg weight= 0.190673 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n1jA/info/1n1jA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1n1jA/nostruct-align/1n1jA.t2k.a2m.gz, have 613162 columns in 2711 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qmgA/nostruct-align/1qmgA.t2k.a2m.gz
# 1qmgA.t2k.a2m with 184 sequences, total weight= 13.372 avg weight= 0.0726739 26 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qmgA/info/1qmgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qmgA/nostruct-align/1qmgA.t2k.a2m.gz, have 613676 columns in 2712 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jovA/nostruct-align/1jovA.t2k.a2m.gz
# 1jovA.t2k.a2m with 75 sequences, total weight= 41.2343 avg weight= 0.54979 44 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jovA/info/1jovA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jovA/nostruct-align/1jovA.t2k.a2m.gz, have 613945 columns in 2713 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fsqA/nostruct-align/2fsqA.t2k.a2m.gz
# 2fsqA.t2k.a2m with 12 sequences, total weight= 7.8788 avg weight= 0.656567 20 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fsqA/info/2fsqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fsqA/nostruct-align/2fsqA.t2k.a2m.gz, have 614177 columns in 2714 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vmgA/nostruct-align/1vmgA.t2k.a2m.gz
# 1vmgA.t2k.a2m with 277 sequences, total weight= 79.78 avg weight= 0.288014 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30077 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vmgA/info/1vmgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vmgA/nostruct-align/1vmgA.t2k.a2m.gz, have 614260 columns in 2715 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dg6A/nostruct-align/1dg6A.t2k.a2m.gz
# 1dg6A.t2k.a2m with 255 sequences, total weight= 40.5451 avg weight= 0.159 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dg6A/info/1dg6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dg6A/nostruct-align/1dg6A.t2k.a2m.gz, have 614409 columns in 2716 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1syyA/nostruct-align/1syyA.t2k.a2m.gz
# 1syyA.t2k.a2m with 414 sequences, total weight= 128.528 avg weight= 0.310455 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30299 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1syyA/info/1syyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1syyA/nostruct-align/1syyA.t2k.a2m.gz, have 614726 columns in 2717 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hc1A/nostruct-align/2hc1A.t2k.a2m.gz
# 2hc1A.t2k.a2m with 2573 sequences, total weight= 2246.64 avg weight= 0.873162 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30371 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hc1A/info/2hc1A.stride-mixed.strand_sep
WARNING: skipping b, since it is lower case.
WARNING: skipping h, since it is lower case.
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hc1A/nostruct-align/2hc1A.t2k.a2m.gz, have 615014 columns in 2718 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gpeA/nostruct-align/1gpeA.t2k.a2m.gz
# 1gpeA.t2k.a2m with 372 sequences, total weight= 372 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13867 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gpeA/info/1gpeA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gpeA/nostruct-align/1gpeA.t2k.a2m.gz, have 615601 columns in 2719 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k.a2m.gz
# 1nzyA.t2k.a2m with 486 sequences, total weight= 486 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26747 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k.a2m.gz, have 615870 columns in 2720 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r7jA/nostruct-align/1r7jA.t2k.a2m.gz
# 1r7jA.t2k.a2m with 37 sequences, total weight= 28.7695 avg weight= 0.777554 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r7jA/info/1r7jA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r7jA/nostruct-align/1r7jA.t2k.a2m.gz, have 615960 columns in 2721 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2oqgA/nostruct-align/2oqgA.t2k.a2m.gz
# 2oqgA.t2k.a2m with 1917 sequences, total weight= 234.7 avg weight= 0.122431 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31037 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2oqgA/info/2oqgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2oqgA/nostruct-align/2oqgA.t2k.a2m.gz, have 616069 columns in 2722 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cxnA/nostruct-align/2cxnA.t2k.a2m.gz
# 2cxnA.t2k.a2m with 1134 sequences, total weight= 66.7362 avg weight= 0.0588503 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30068 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cxnA/info/2cxnA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cxnA/nostruct-align/2cxnA.t2k.a2m.gz, have 616626 columns in 2723 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zlhB/nostruct-align/1zlhB.t2k.a2m.gz
# 1zlhB.t2k.a2m with 4 sequences, total weight= 1.86693 avg weight= 0.466733 8 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zlhB/info/1zlhB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zlhB/nostruct-align/1zlhB.t2k.a2m.gz, have 616700 columns in 2724 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oz2A/nostruct-align/1oz2A.t2k.a2m.gz
# 1oz2A.t2k.a2m with 81 sequences, total weight= 13.4271 avg weight= 0.165766 29 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oz2A/info/1oz2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oz2A/nostruct-align/1oz2A.t2k.a2m.gz, have 617024 columns in 2725 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1shuX/nostruct-align/1shuX.t2k.a2m.gz
# 1shuX.t2k.a2m with 915 sequences, total weight= 915 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13724 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1shuX/info/1shuX.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1shuX/nostruct-align/1shuX.t2k.a2m.gz, have 617205 columns in 2726 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1df7A/nostruct-align/1df7A.t2k.a2m.gz
# 1df7A.t2k.a2m with 397 sequences, total weight= 62.0233 avg weight= 0.15623 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30068 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1df7A/info/1df7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1df7A/nostruct-align/1df7A.t2k.a2m.gz, have 617364 columns in 2727 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s8nA/nostruct-align/1s8nA.t2k.a2m.gz
# 1s8nA.t2k.a2m with 8383 sequences, total weight= 8383 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2148 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s8nA/info/1s8nA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1s8nA/nostruct-align/1s8nA.t2k.a2m.gz, have 617554 columns in 2728 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h8uA/nostruct-align/1h8uA.t2k.a2m.gz
# 1h8uA.t2k.a2m with 590 sequences, total weight= 590 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22769 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h8uA/info/1h8uA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h8uA/nostruct-align/1h8uA.t2k.a2m.gz, have 617669 columns in 2729 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nlvA/nostruct-align/2nlvA.t2k.a2m.gz
# 2nlvA.t2k.a2m with 36 sequences, total weight= 9.61678 avg weight= 0.267133 28 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nlvA/info/2nlvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2n/2nlvA/nostruct-align/2nlvA.t2k.a2m.gz, have 617781 columns in 2730 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2a0mA/nostruct-align/2a0mA.t2k.a2m.gz
# 2a0mA.t2k.a2m with 479 sequences, total weight= 191.972 avg weight= 0.400776 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3042 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2a0mA/info/2a0mA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2a0mA/nostruct-align/2a0mA.t2k.a2m.gz, have 618079 columns in 2731 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2o5vA/nostruct-align/2o5vA.t2k.a2m.gz
# 2o5vA.t2k.a2m with 3837 sequences, total weight= 3837 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.835806 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2o5vA/info/2o5vA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2o5vA/nostruct-align/2o5vA.t2k.a2m.gz, have 618437 columns in 2732 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oc7A/nostruct-align/1oc7A.t2k.a2m.gz
# 1oc7A.t2k.a2m with 84 sequences, total weight= 18.5006 avg weight= 0.220245 35 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oc7A/info/1oc7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oc7A/nostruct-align/1oc7A.t2k.a2m.gz, have 618801 columns in 2733 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ufoA/nostruct-align/1ufoA.t2k.a2m.gz
# 1ufoA.t2k.a2m with 455 sequences, total weight= 455 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.888328 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ufoA/info/1ufoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1ufoA/nostruct-align/1ufoA.t2k.a2m.gz, have 619039 columns in 2734 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2a4xA/nostruct-align/2a4xA.t2k.a2m.gz
# 2a4xA.t2k.a2m with 506 sequences, total weight= 506 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.987336 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2a4xA/info/2a4xA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2a4xA/nostruct-align/2a4xA.t2k.a2m.gz, have 619170 columns in 2735 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2a31A/nostruct-align/2a31A.t2k.a2m.gz
# 2a31A.t2k.a2m with 5850 sequences, total weight= 3969.68 avg weight= 0.678578 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31272 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2a31A/info/2a31A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2a31A/nostruct-align/2a31A.t2k.a2m.gz, have 619393 columns in 2736 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1ji7A/nostruct-align/1ji7A.t2k.a2m.gz
# 1ji7A.t2k.a2m with 157 sequences, total weight= 19.8315 avg weight= 0.126315 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1ji7A/info/1ji7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1ji7A/nostruct-align/1ji7A.t2k.a2m.gz, have 619470 columns in 2737 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wkrA/nostruct-align/1wkrA.t2k.a2m.gz
# 1wkrA.t2k.a2m with 949 sequences, total weight= 759.101 avg weight= 0.799895 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3045 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wkrA/info/1wkrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wkrA/nostruct-align/1wkrA.t2k.a2m.gz, have 619810 columns in 2738 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2iy9A/nostruct-align/2iy9A.t2k.a2m.gz
# 2iy9A.t2k.a2m with 580 sequences, total weight= 580 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29311 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2iy9A/info/2iy9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2iy9A/nostruct-align/2iy9A.t2k.a2m.gz, have 620119 columns in 2739 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q74A/nostruct-align/1q74A.t2k.a2m.gz
# 1q74A.t2k.a2m with 136 sequences, total weight= 136 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0932 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q74A/info/1q74A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1q74A/nostruct-align/1q74A.t2k.a2m.gz, have 620406 columns in 2740 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mml/nostruct-align/1mml.t2k.a2m.gz
# 1mml.t2k.a2m with 15068 sequences, total weight= 38.3084 avg weight= 0.00254237 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30044 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mml/info/1mml.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mml/nostruct-align/1mml.t2k.a2m.gz, have 620657 columns in 2741 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y93A/nostruct-align/1y93A.t2k.a2m.gz
# 1y93A.t2k.a2m with 650 sequences, total weight= 102.092 avg weight= 0.157064 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30375 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y93A/info/1y93A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1y93A/nostruct-align/1y93A.t2k.a2m.gz, have 620815 columns in 2742 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i2kA/nostruct-align/1i2kA.t2k.a2m.gz
# 1i2kA.t2k.a2m with 302 sequences, total weight= 203.183 avg weight= 0.672792 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30276 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i2kA/info/1i2kA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1i2kA/nostruct-align/1i2kA.t2k.a2m.gz, have 621084 columns in 2743 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1aquA/nostruct-align/1aquA.t2k.a2m.gz
# 1aquA.t2k.a2m with 267 sequences, total weight= 83.8884 avg weight= 0.314189 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30089 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1aquA/info/1aquA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1aquA/nostruct-align/1aquA.t2k.a2m.gz, have 621365 columns in 2744 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fgqX/nostruct-align/2fgqX.t2k.a2m.gz
# 2fgqX.t2k.a2m with 1481 sequences, total weight= 1256.1 avg weight= 0.84814 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30462 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fgqX/info/2fgqX.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fgqX/nostruct-align/2fgqX.t2k.a2m.gz, have 621695 columns in 2745 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xphA/nostruct-align/1xphA.t2k.a2m.gz
# 1xphA.t2k.a2m with 2433 sequences, total weight= 2433 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13921 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xphA/info/1xphA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xphA/nostruct-align/1xphA.t2k.a2m.gz, have 621834 columns in 2746 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g4iA/nostruct-align/1g4iA.t2k.a2m.gz
# 1g4iA.t2k.a2m with 386 sequences, total weight= 17.2691 avg weight= 0.0447386 45 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g4iA/info/1g4iA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1g4iA/nostruct-align/1g4iA.t2k.a2m.gz, have 621957 columns in 2747 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sc3A/nostruct-align/1sc3A.t2k.a2m.gz
# 1sc3A.t2k.a2m with 288 sequences, total weight= 79.6015 avg weight= 0.276394 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30079 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sc3A/info/1sc3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1sc3A/nostruct-align/1sc3A.t2k.a2m.gz, have 622130 columns in 2748 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2o6yA/nostruct-align/2o6yA.t2k.a2m.gz
# 2o6yA.t2k.a2m with 734 sequences, total weight= 34.1593 avg weight= 0.0465386 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2o6yA/info/2o6yA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2o6yA/nostruct-align/2o6yA.t2k.a2m.gz, have 622645 columns in 2749 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2oblA/nostruct-align/2oblA.t2k.a2m.gz
# 2oblA.t2k.a2m with 7771 sequences, total weight= 47.9279 avg weight= 0.00616754 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30174 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2oblA/info/2oblA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2oblA/nostruct-align/2oblA.t2k.a2m.gz, have 622991 columns in 2750 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2oplA/nostruct-align/2oplA.t2k.a2m.gz
# 2oplA.t2k.a2m with 370 sequences, total weight= 370 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16244 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2oplA/info/2oplA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2oplA/nostruct-align/2oplA.t2k.a2m.gz, have 623172 columns in 2751 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dnlA/nostruct-align/1dnlA.t2k.a2m.gz
# 1dnlA.t2k.a2m with 114 sequences, total weight= 22.1333 avg weight= 0.194152 38 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dnlA/info/1dnlA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dnlA/nostruct-align/1dnlA.t2k.a2m.gz, have 623371 columns in 2752 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54A/nostruct-align/1v54A.t2k.a2m.gz
# 1v54A.t2k.a2m with 14185 sequences, total weight= 49.6466 avg weight= 0.00349993 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54A/info/1v54A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v54A/nostruct-align/1v54A.t2k.a2m.gz, have 623885 columns in 2753 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mcvI/nostruct-align/1mcvI.t2k.a2m.gz
# 1mcvI.t2k.a2m with 53 sequences, total weight= 2.49202 avg weight= 0.0470193 20 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mcvI/info/1mcvI.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mcvI/nostruct-align/1mcvI.t2k.a2m.gz, have 623913 columns in 2754 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1ay7B/nostruct-align/1ay7B.t2k.a2m.gz
# 1ay7B.t2k.a2m with 34 sequences, total weight= 20.5533 avg weight= 0.604509 32 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1ay7B/info/1ay7B.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1ay7B/nostruct-align/1ay7B.t2k.a2m.gz, have 624002 columns in 2755 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ia6A/nostruct-align/1ia6A.t2k.a2m.gz
# 1ia6A.t2k.a2m with 278 sequences, total weight= 46.1248 avg weight= 0.165916 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ia6A/info/1ia6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1ia6A/nostruct-align/1ia6A.t2k.a2m.gz, have 624425 columns in 2756 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kid/nostruct-align/1kid.t2k.a2m.gz
# 1kid.t2k.a2m with 670 sequences, total weight= 11.686 avg weight= 0.0174419 35 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kid/info/1kid.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kid/nostruct-align/1kid.t2k.a2m.gz, have 624618 columns in 2757 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bn8A/nostruct-align/1bn8A.t2k.a2m.gz
# 1bn8A.t2k.a2m with 210 sequences, total weight= 62.563 avg weight= 0.297919 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bn8A/info/1bn8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1bn8A/nostruct-align/1bn8A.t2k.a2m.gz, have 625017 columns in 2758 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/4u/4ubpC/nostruct-align/4ubpC.t2k.a2m.gz
# 4ubpC.t2k.a2m with 365 sequences, total weight= 247.832 avg weight= 0.678992 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30153 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/4u/4ubpC/info/4ubpC.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/4u/4ubpC/nostruct-align/4ubpC.t2k.a2m.gz, have 625587 columns in 2759 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ryqA/nostruct-align/1ryqA.t2k.a2m.gz
# 1ryqA.t2k.a2m with 24 sequences, total weight= 6.45794 avg weight= 0.269081 23 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ryqA/info/1ryqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1ryqA/nostruct-align/1ryqA.t2k.a2m.gz, have 625651 columns in 2760 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zv1A/nostruct-align/1zv1A.t2k.a2m.gz
# 1zv1A.t2k.a2m with 30 sequences, total weight= 4.45758 avg weight= 0.148586 17 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zv1A/info/1zv1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zv1A/nostruct-align/1zv1A.t2k.a2m.gz, have 625710 columns in 2761 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2j12A/nostruct-align/2j12A.t2k.a2m.gz
# 2j12A.t2k.a2m with 145 sequences, total weight= 19.0858 avg weight= 0.131626 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2j12A/info/2j12A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2j12A/nostruct-align/2j12A.t2k.a2m.gz, have 625892 columns in 2762 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fm0E/nostruct-align/1fm0E.t2k.a2m.gz
# 1fm0E.t2k.a2m with 127 sequences, total weight= 25.9591 avg weight= 0.204403 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fm0E/info/1fm0E.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fm0E/nostruct-align/1fm0E.t2k.a2m.gz, have 626034 columns in 2763 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2idlA/nostruct-align/2idlA.t2k.a2m.gz
# 2idlA.t2k.a2m with 67 sequences, total weight= 28.5007 avg weight= 0.425383 44 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2idlA/info/2idlA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2idlA/nostruct-align/2idlA.t2k.a2m.gz, have 626147 columns in 2764 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fhzB/nostruct-align/2fhzB.t2k.a2m.gz
# 2fhzB.t2k.a2m with 13 sequences, total weight= 4.38862 avg weight= 0.337586 15 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fhzB/info/2fhzB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fhzB/nostruct-align/2fhzB.t2k.a2m.gz, have 626240 columns in 2765 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b6g/nostruct-align/1b6g.t2k.a2m.gz
# 1b6g.t2k.a2m with 518 sequences, total weight= 518 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.907857 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b6g/info/1b6g.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1b6g/nostruct-align/1b6g.t2k.a2m.gz, have 626550 columns in 2766 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zvaA/nostruct-align/1zvaA.t2k.a2m.gz
# 1zvaA.t2k.a2m with 240 sequences, total weight= 6.52606 avg weight= 0.0271919 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zvaA/info/1zvaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zvaA/nostruct-align/1zvaA.t2k.a2m.gz, have 626625 columns in 2767 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hft/nostruct-align/2hft.t2k.a2m.gz
# 2hft.t2k.a2m with 116 sequences, total weight= 78.1785 avg weight= 0.673953 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hft/info/2hft.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hft/nostruct-align/2hft.t2k.a2m.gz, have 626830 columns in 2768 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cxxA/nostruct-align/2cxxA.t2k.a2m.gz
# 2cxxA.t2k.a2m with 4960 sequences, total weight= 4960 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06031 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cxxA/info/2cxxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cxxA/nostruct-align/2cxxA.t2k.a2m.gz, have 627014 columns in 2769 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cwsA/nostruct-align/2cwsA.t2k.a2m.gz
# 2cwsA.t2k.a2m with 46 sequences, total weight= 46 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28064 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cwsA/info/2cwsA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cwsA/nostruct-align/2cwsA.t2k.a2m.gz, have 627241 columns in 2770 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ys7A/nostruct-align/1ys7A.t2k.a2m.gz
# 1ys7A.t2k.a2m with 14813 sequences, total weight= 14813 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20333 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ys7A/info/1ys7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1ys7A/nostruct-align/1ys7A.t2k.a2m.gz, have 627465 columns in 2771 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ew6A/nostruct-align/1ew6A.t2k.a2m.gz
# 1ew6A.t2k.a2m with 218 sequences, total weight= 86.089 avg weight= 0.394904 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3014 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ew6A/info/1ew6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1ew6A/nostruct-align/1ew6A.t2k.a2m.gz, have 627602 columns in 2772 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2f01A/nostruct-align/2f01A.t2k.a2m.gz
# 2f01A.t2k.a2m with 123 sequences, total weight= 23.321 avg weight= 0.189602 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2f01A/info/2f01A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2f01A/nostruct-align/2f01A.t2k.a2m.gz, have 627723 columns in 2773 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i8oA/nostruct-align/1i8oA.t2k.a2m.gz
# 1i8oA.t2k.a2m with 423 sequences, total weight= 62.9052 avg weight= 0.148712 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30039 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i8oA/info/1i8oA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1i8oA/nostruct-align/1i8oA.t2k.a2m.gz, have 627837 columns in 2774 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h97A/nostruct-align/1h97A.t2k.a2m.gz
# 1h97A.t2k.a2m with 392 sequences, total weight= 141.813 avg weight= 0.361769 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3052 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h97A/info/1h97A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h97A/nostruct-align/1h97A.t2k.a2m.gz, have 627984 columns in 2775 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dqiA/nostruct-align/1dqiA.t2k.a2m.gz
# 1dqiA.t2k.a2m with 26 sequences, total weight= 10.876 avg weight= 0.418308 26 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dqiA/info/1dqiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dqiA/nostruct-align/1dqiA.t2k.a2m.gz, have 628108 columns in 2776 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nwzA/nostruct-align/1nwzA.t2k.a2m.gz
# 1nwzA.t2k.a2m with 15 sequences, total weight= 3.33871 avg weight= 0.222581 15 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nwzA/info/1nwzA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nwzA/nostruct-align/1nwzA.t2k.a2m.gz, have 628233 columns in 2777 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2h88D/nostruct-align/2h88D.t2k.a2m.gz
# 2h88D.t2k.a2m with 68 sequences, total weight= 10.5831 avg weight= 0.155634 30 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2h88D/info/2h88D.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2h88D/nostruct-align/2h88D.t2k.a2m.gz, have 628334 columns in 2778 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gqtA/nostruct-align/2gqtA.t2k.a2m.gz
# 2gqtA.t2k.a2m with 579 sequences, total weight= 41.282 avg weight= 0.0712989 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30081 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gqtA/info/2gqtA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gqtA/nostruct-align/2gqtA.t2k.a2m.gz, have 628601 columns in 2779 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hpi/nostruct-align/1hpi.t2k.a2m.gz
# 1hpi.t2k.a2m with 29 sequences, total weight= 7.14363 avg weight= 0.246332 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hpi/info/1hpi.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hpi/nostruct-align/1hpi.t2k.a2m.gz, have 628672 columns in 2780 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ynpA/nostruct-align/1ynpA.t2k.a2m.gz
# 1ynpA.t2k.a2m with 2799 sequences, total weight= 708.744 avg weight= 0.253213 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32929 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ynpA/info/1ynpA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1ynpA/nostruct-align/1ynpA.t2k.a2m.gz, have 628955 columns in 2781 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nzlA/nostruct-align/2nzlA.t2k.a2m.gz
# 2nzlA.t2k.a2m with 794 sequences, total weight= 91.0843 avg weight= 0.114716 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30297 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nzlA/info/2nzlA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2n/2nzlA/nostruct-align/2nzlA.t2k.a2m.gz, have 629294 columns in 2782 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2ij2A/nostruct-align/2ij2A.t2k.a2m.gz
# 2ij2A.t2k.a2m with 8328 sequences, total weight= 8328 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.958776 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2ij2A/info/2ij2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2ij2A/nostruct-align/2ij2A.t2k.a2m.gz, have 629744 columns in 2783 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oqvA/nostruct-align/1oqvA.t2k.a2m.gz
# 1oqvA.t2k.a2m with 41 sequences, total weight= 3.71169 avg weight= 0.0905289 16 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oqvA/info/1oqvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oqvA/nostruct-align/1oqvA.t2k.a2m.gz, have 629915 columns in 2784 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sk7A/nostruct-align/1sk7A.t2k.a2m.gz
# 1sk7A.t2k.a2m with 42 sequences, total weight= 19.6809 avg weight= 0.468593 32 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sk7A/info/1sk7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1sk7A/nostruct-align/1sk7A.t2k.a2m.gz, have 630102 columns in 2785 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zpsA/nostruct-align/1zpsA.t2k.a2m.gz
# 1zpsA.t2k.a2m with 298 sequences, total weight= 15.3759 avg weight= 0.0515971 42 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zpsA/info/1zpsA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zpsA/nostruct-align/1zpsA.t2k.a2m.gz, have 630226 columns in 2786 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nrvA/nostruct-align/1nrvA.t2k.a2m.gz
# 1nrvA.t2k.a2m with 990 sequences, total weight= 104.57 avg weight= 0.105627 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30762 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nrvA/info/1nrvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nrvA/nostruct-align/1nrvA.t2k.a2m.gz, have 630326 columns in 2787 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jlvA/nostruct-align/1jlvA.t2k.a2m.gz
# 1jlvA.t2k.a2m with 1127 sequences, total weight= 1127 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14521 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jlvA/info/1jlvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jlvA/nostruct-align/1jlvA.t2k.a2m.gz, have 630533 columns in 2788 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vi0A/nostruct-align/1vi0A.t2k.a2m.gz
# 1vi0A.t2k.a2m with 1854 sequences, total weight= 1854 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.861191 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vi0A/info/1vi0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vi0A/nostruct-align/1vi0A.t2k.a2m.gz, have 630722 columns in 2789 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2osaA/nostruct-align/2osaA.t2k.a2m.gz
# 2osaA.t2k.a2m with 2310 sequences, total weight= 2002.05 avg weight= 0.866687 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30403 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2osaA/info/2osaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2osaA/nostruct-align/2osaA.t2k.a2m.gz, have 630918 columns in 2790 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bfwA/nostruct-align/2bfwA.t2k.a2m.gz
# 2bfwA.t2k.a2m with 3830 sequences, total weight= 3830 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09687 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bfwA/info/2bfwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bfwA/nostruct-align/2bfwA.t2k.a2m.gz, have 631114 columns in 2791 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kcqA/nostruct-align/1kcqA.t2k.a2m.gz
# 1kcqA.t2k.a2m with 406 sequences, total weight= 406 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27585 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kcqA/info/1kcqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kcqA/nostruct-align/1kcqA.t2k.a2m.gz, have 631217 columns in 2792 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w53A/nostruct-align/1w53A.t2k.a2m.gz
# 1w53A.t2k.a2m with 19 sequences, total weight= 6.02499 avg weight= 0.317105 20 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w53A/info/1w53A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w53A/nostruct-align/1w53A.t2k.a2m.gz, have 631301 columns in 2793 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1isuA/nostruct-align/1isuA.t2k.a2m.gz
# 1isuA.t2k.a2m with 29 sequences, total weight= 10.5676 avg weight= 0.364402 24 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1isuA/info/1isuA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1isuA/nostruct-align/1isuA.t2k.a2m.gz, have 631363 columns in 2794 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yc9A/nostruct-align/1yc9A.t2k.a2m.gz
# 1yc9A.t2k.a2m with 994 sequences, total weight= 994 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09131 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yc9A/info/1yc9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yc9A/nostruct-align/1yc9A.t2k.a2m.gz, have 631774 columns in 2795 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iab/nostruct-align/1iab.t2k.a2m.gz
# 1iab.t2k.a2m with 212 sequences, total weight= 45.2678 avg weight= 0.213527 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iab/info/1iab.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1iab/nostruct-align/1iab.t2k.a2m.gz, have 631974 columns in 2796 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qtwA/nostruct-align/1qtwA.t2k.a2m.gz
# 1qtwA.t2k.a2m with 116 sequences, total weight= 59.9063 avg weight= 0.516434 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qtwA/info/1qtwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qtwA/nostruct-align/1qtwA.t2k.a2m.gz, have 632259 columns in 2797 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2ccwA/nostruct-align/2ccwA.t2k.a2m.gz
# 2ccwA.t2k.a2m with 94 sequences, total weight= 8.60732 avg weight= 0.0915672 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2ccwA/info/2ccwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2ccwA/nostruct-align/2ccwA.t2k.a2m.gz, have 632388 columns in 2798 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vsrA/nostruct-align/1vsrA.t2k.a2m.gz
# 1vsrA.t2k.a2m with 24 sequences, total weight= 6.91678 avg weight= 0.288199 20 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vsrA/info/1vsrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vsrA/nostruct-align/1vsrA.t2k.a2m.gz, have 632522 columns in 2799 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1na3A/nostruct-align/1na3A.t2k.a2m.gz
# 1na3A.t2k.a2m with 3265 sequences, total weight= 3265 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02194 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1na3A/info/1na3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1na3A/nostruct-align/1na3A.t2k.a2m.gz, have 632608 columns in 2800 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jjtA/nostruct-align/1jjtA.t2k.a2m.gz
# 1jjtA.t2k.a2m with 415 sequences, total weight= 415 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15161 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jjtA/info/1jjtA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jjtA/nostruct-align/1jjtA.t2k.a2m.gz, have 632828 columns in 2801 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lo7A/nostruct-align/1lo7A.t2k.a2m.gz
# 1lo7A.t2k.a2m with 143 sequences, total weight= 143 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28188 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lo7A/info/1lo7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lo7A/nostruct-align/1lo7A.t2k.a2m.gz, have 632968 columns in 2802 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fcr/nostruct-align/2fcr.t2k.a2m.gz
# 2fcr.t2k.a2m with 372 sequences, total weight= 162.408 avg weight= 0.436581 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30306 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fcr/info/2fcr.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fcr/nostruct-align/2fcr.t2k.a2m.gz, have 633141 columns in 2803 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lb6A/nostruct-align/1lb6A.t2k.a2m.gz
# 1lb6A.t2k.a2m with 116 sequences, total weight= 28.4089 avg weight= 0.244904 41 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lb6A/info/1lb6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lb6A/nostruct-align/1lb6A.t2k.a2m.gz, have 633296 columns in 2804 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gci/nostruct-align/1gci.t2k.a2m.gz
# 1gci.t2k.a2m with 742 sequences, total weight= 170.219 avg weight= 0.229406 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.312 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gci/info/1gci.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gci/nostruct-align/1gci.t2k.a2m.gz, have 633565 columns in 2805 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xbiA/nostruct-align/1xbiA.t2k.a2m.gz
# 1xbiA.t2k.a2m with 660 sequences, total weight= 124.562 avg weight= 0.18873 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30058 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xbiA/info/1xbiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xbiA/nostruct-align/1xbiA.t2k.a2m.gz, have 633683 columns in 2806 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qtnB/nostruct-align/1qtnB.t2k.a2m.gz
# 1qtnB.t2k.a2m with 196 sequences, total weight= 21.9347 avg weight= 0.111912 42 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qtnB/info/1qtnB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qtnB/nostruct-align/1qtnB.t2k.a2m.gz, have 633773 columns in 2807 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m1nA/nostruct-align/1m1nA.t2k.a2m.gz
# 1m1nA.t2k.a2m with 374 sequences, total weight= 195.392 avg weight= 0.522438 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30313 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m1nA/info/1m1nA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m1nA/nostruct-align/1m1nA.t2k.a2m.gz, have 634250 columns in 2808 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fecA/nostruct-align/1fecA.t2k.a2m.gz
# 1fecA.t2k.a2m with 693 sequences, total weight= 693 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18617 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fecA/info/1fecA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fecA/nostruct-align/1fecA.t2k.a2m.gz, have 634735 columns in 2809 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n3lA/nostruct-align/1n3lA.t2k.a2m.gz
# 1n3lA.t2k.a2m with 283 sequences, total weight= 155.922 avg weight= 0.550962 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30161 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n3lA/info/1n3lA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1n3lA/nostruct-align/1n3lA.t2k.a2m.gz, have 635067 columns in 2810 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wlgA/nostruct-align/1wlgA.t2k.a2m.gz
# 1wlgA.t2k.a2m with 311 sequences, total weight= 172.589 avg weight= 0.554947 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30247 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wlgA/info/1wlgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wlgA/nostruct-align/1wlgA.t2k.a2m.gz, have 635360 columns in 2811 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l8rA/nostruct-align/1l8rA.t2k.a2m.gz
# 1l8rA.t2k.a2m with 90 sequences, total weight= 6.17832 avg weight= 0.068648 23 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l8rA/info/1l8rA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1l8rA/nostruct-align/1l8rA.t2k.a2m.gz, have 635461 columns in 2812 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hy5B/nostruct-align/2hy5B.t2k.a2m.gz
# 2hy5B.t2k.a2m with 109 sequences, total weight= 20.1193 avg weight= 0.184581 24 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hy5B/info/2hy5B.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hy5B/nostruct-align/2hy5B.t2k.a2m.gz, have 635593 columns in 2813 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tvxA/nostruct-align/1tvxA.t2k.a2m.gz
# 1tvxA.t2k.a2m with 360 sequences, total weight= 45.0816 avg weight= 0.125227 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tvxA/info/1tvxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tvxA/nostruct-align/1tvxA.t2k.a2m.gz, have 635657 columns in 2814 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1txgA/nostruct-align/1txgA.t2k.a2m.gz
# 1txgA.t2k.a2m with 484 sequences, total weight= 78.3468 avg weight= 0.161874 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30138 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1txgA/info/1txgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1txgA/nostruct-align/1txgA.t2k.a2m.gz, have 635992 columns in 2815 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2je8A/nostruct-align/2je8A.t2k.a2m.gz
# 2je8A.t2k.a2m with 722 sequences, total weight= 722 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01433 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2je8A/info/2je8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2je8A/nostruct-align/2je8A.t2k.a2m.gz, have 636829 columns in 2816 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wer/nostruct-align/1wer.t2k.a2m.gz
# 1wer.t2k.a2m with 171 sequences, total weight= 57.6555 avg weight= 0.337167 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wer/info/1wer.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wer/nostruct-align/1wer.t2k.a2m.gz, have 637153 columns in 2817 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xkiA/nostruct-align/1xkiA.t2k.a2m.gz
# 1xkiA.t2k.a2m with 237 sequences, total weight= 197.39 avg weight= 0.832871 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30101 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xkiA/info/1xkiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xkiA/nostruct-align/1xkiA.t2k.a2m.gz, have 637281 columns in 2818 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w0pA/nostruct-align/1w0pA.t2k.a2m.gz
# 1w0pA.t2k.a2m with 128 sequences, total weight= 73.5734 avg weight= 0.574792 29 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w0pA/info/1w0pA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w0pA/nostruct-align/1w0pA.t2k.a2m.gz, have 638034 columns in 2819 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jz8A/nostruct-align/1jz8A.t2k.a2m.gz
# 1jz8A.t2k.a2m with 358 sequences, total weight= 358 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27164 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jz8A/info/1jz8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jz8A/nostruct-align/1jz8A.t2k.a2m.gz, have 639045 columns in 2820 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pk1B/nostruct-align/1pk1B.t2k.a2m.gz
# 1pk1B.t2k.a2m with 303 sequences, total weight= 32.8413 avg weight= 0.108387 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pk1B/info/1pk1B.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pk1B/nostruct-align/1pk1B.t2k.a2m.gz, have 639115 columns in 2821 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qnaA/nostruct-align/1qnaA.t2k.a2m.gz
# 1qnaA.t2k.a2m with 169 sequences, total weight= 17.9432 avg weight= 0.106173 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qnaA/info/1qnaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qnaA/nostruct-align/1qnaA.t2k.a2m.gz, have 639297 columns in 2822 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n7oA/nostruct-align/1n7oA.t2k.a2m.gz
# 1n7oA.t2k.a2m with 54 sequences, total weight= 20.8952 avg weight= 0.386947 28 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n7oA/info/1n7oA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1n7oA/nostruct-align/1n7oA.t2k.a2m.gz, have 640018 columns in 2823 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r5lA/nostruct-align/1r5lA.t2k.a2m.gz
# 1r5lA.t2k.a2m with 293 sequences, total weight= 293 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14586 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r5lA/info/1r5lA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r5lA/nostruct-align/1r5lA.t2k.a2m.gz, have 640269 columns in 2824 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y37A/nostruct-align/1y37A.t2k.a2m.gz
# 1y37A.t2k.a2m with 4013 sequences, total weight= 4013 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.821047 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y37A/info/1y37A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1y37A/nostruct-align/1y37A.t2k.a2m.gz, have 640563 columns in 2825 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2b3fA/nostruct-align/2b3fA.t2k.a2m.gz
# 2b3fA.t2k.a2m with 640 sequences, total weight= 640 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.925984 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2b3fA/info/2b3fA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2b3fA/nostruct-align/2b3fA.t2k.a2m.gz, have 640955 columns in 2826 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ukfA/nostruct-align/1ukfA.t2k.a2m.gz
# 1ukfA.t2k.a2m with 23 sequences, total weight= 18.1573 avg weight= 0.78945 22 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ukfA/info/1ukfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1ukfA/nostruct-align/1ukfA.t2k.a2m.gz, have 641143 columns in 2827 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uu3A/nostruct-align/1uu3A.t2k.a2m.gz
# 1uu3A.t2k.a2m with 14787 sequences, total weight= 14787 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2009 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uu3A/info/1uu3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uu3A/nostruct-align/1uu3A.t2k.a2m.gz, have 641420 columns in 2828 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1ty0A/nostruct-align/1ty0A.t2k.a2m.gz
# 1ty0A.t2k.a2m with 243 sequences, total weight= 49.8275 avg weight= 0.205051 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1ty0A/info/1ty0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1ty0A/nostruct-align/1ty0A.t2k.a2m.gz, have 641631 columns in 2829 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w0dA/nostruct-align/1w0dA.t2k.a2m.gz
# 1w0dA.t2k.a2m with 895 sequences, total weight= 32.9263 avg weight= 0.0367892 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w0dA/info/1w0dA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w0dA/nostruct-align/1w0dA.t2k.a2m.gz, have 641968 columns in 2830 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iv3A/nostruct-align/1iv3A.t2k.a2m.gz
# 1iv3A.t2k.a2m with 132 sequences, total weight= 10.142 avg weight= 0.0768334 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iv3A/info/1iv3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1iv3A/nostruct-align/1iv3A.t2k.a2m.gz, have 642118 columns in 2831 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zpwX/nostruct-align/1zpwX.t2k.a2m.gz
# 1zpwX.t2k.a2m with 73 sequences, total weight= 26.701 avg weight= 0.365767 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zpwX/info/1zpwX.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zpwX/nostruct-align/1zpwX.t2k.a2m.gz, have 642200 columns in 2832 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gxgA/nostruct-align/2gxgA.t2k.a2m.gz
# 2gxgA.t2k.a2m with 874 sequences, total weight= 874 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22243 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gxgA/info/2gxgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gxgA/nostruct-align/2gxgA.t2k.a2m.gz, have 642340 columns in 2833 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vmaA/nostruct-align/1vmaA.t2k.a2m.gz
# 1vmaA.t2k.a2m with 774 sequences, total weight= 78.4778 avg weight= 0.101393 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30442 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vmaA/info/1vmaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vmaA/nostruct-align/1vmaA.t2k.a2m.gz, have 642634 columns in 2834 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p5vA/nostruct-align/1p5vA.t2k.a2m.gz
# 1p5vA.t2k.a2m with 218 sequences, total weight= 30.4036 avg weight= 0.139466 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p5vA/info/1p5vA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1p5vA/nostruct-align/1p5vA.t2k.a2m.gz, have 642825 columns in 2835 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jf8A/nostruct-align/1jf8A.t2k.a2m.gz
# 1jf8A.t2k.a2m with 218 sequences, total weight= 73.5379 avg weight= 0.33733 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30087 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jf8A/info/1jf8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jf8A/nostruct-align/1jf8A.t2k.a2m.gz, have 642955 columns in 2836 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fgyA/nostruct-align/1fgyA.t2k.a2m.gz
# 1fgyA.t2k.a2m with 618 sequences, total weight= 618 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13067 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fgyA/info/1fgyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fgyA/nostruct-align/1fgyA.t2k.a2m.gz, have 643082 columns in 2837 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wvgA/nostruct-align/1wvgA.t2k.a2m.gz
# 1wvgA.t2k.a2m with 2535 sequences, total weight= 2535 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.192 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wvgA/info/1wvgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wvgA/nostruct-align/1wvgA.t2k.a2m.gz, have 643434 columns in 2838 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xq6A/nostruct-align/1xq6A.t2k.a2m.gz
# 1xq6A.t2k.a2m with 882 sequences, total weight= 882 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.9789 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xq6A/info/1xq6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xq6A/nostruct-align/1xq6A.t2k.a2m.gz, have 643687 columns in 2839 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k7iA/nostruct-align/1k7iA.t2k.a2m.gz
# 1k7iA.t2k.a2m with 765 sequences, total weight= 765 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22404 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k7iA/info/1k7iA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1k7iA/nostruct-align/1k7iA.t2k.a2m.gz, have 644149 columns in 2840 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a8o/nostruct-align/1a8o.t2k.a2m.gz
# 1a8o.t2k.a2m with 3733 sequences, total weight= 12.098 avg weight= 0.00324082 38 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a8o/info/1a8o.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1a8o/nostruct-align/1a8o.t2k.a2m.gz, have 644219 columns in 2841 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fdn/nostruct-align/2fdn.t2k.a2m.gz
# 2fdn.t2k.a2m with 1583 sequences, total weight= 82.9895 avg weight= 0.0524254 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30328 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fdn/info/2fdn.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fdn/nostruct-align/2fdn.t2k.a2m.gz, have 644274 columns in 2842 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l6xA/nostruct-align/1l6xA.t2k.a2m.gz
# 1l6xA.t2k.a2m with 6108 sequences, total weight= 6108 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06335 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l6xA/info/1l6xA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1l6xA/nostruct-align/1l6xA.t2k.a2m.gz, have 644481 columns in 2843 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mxrA/nostruct-align/1mxrA.t2k.a2m.gz
# 1mxrA.t2k.a2m with 251 sequences, total weight= 76.8347 avg weight= 0.306114 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mxrA/info/1mxrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mxrA/nostruct-align/1mxrA.t2k.a2m.gz, have 644820 columns in 2844 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wuiS/nostruct-align/1wuiS.t2k.a2m.gz
# 1wuiS.t2k.a2m with 449 sequences, total weight= 103.11 avg weight= 0.229644 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.301 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wuiS/info/1wuiS.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wuiS/nostruct-align/1wuiS.t2k.a2m.gz, have 645087 columns in 2845 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ecsA/nostruct-align/1ecsA.t2k.a2m.gz
# 1ecsA.t2k.a2m with 111 sequences, total weight= 111 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15406 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ecsA/info/1ecsA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1ecsA/nostruct-align/1ecsA.t2k.a2m.gz, have 645207 columns in 2846 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wddA/nostruct-align/1wddA.t2k.a2m.gz
# 1wddA.t2k.a2m with 12556 sequences, total weight= 11.6069 avg weight= 0.000924411 32 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wddA/info/1wddA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wddA/nostruct-align/1wddA.t2k.a2m.gz, have 645672 columns in 2847 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fclA/nostruct-align/2fclA.t2k.a2m.gz
# 2fclA.t2k.a2m with 20 sequences, total weight= 20 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05957 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fclA/info/2fclA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fclA/nostruct-align/2fclA.t2k.a2m.gz, have 645829 columns in 2848 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m1qA/nostruct-align/1m1qA.t2k.a2m.gz
# 1m1qA.t2k.a2m with 41 sequences, total weight= 26.767 avg weight= 0.652853 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m1qA/info/1m1qA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m1qA/nostruct-align/1m1qA.t2k.a2m.gz, have 645919 columns in 2849 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f0yA/nostruct-align/1f0yA.t2k.a2m.gz
# 1f0yA.t2k.a2m with 311 sequences, total weight= 59.4944 avg weight= 0.1913 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f0yA/info/1f0yA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1f0yA/nostruct-align/1f0yA.t2k.a2m.gz, have 646210 columns in 2850 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ouwA/nostruct-align/1ouwA.t2k.a2m.gz
# 1ouwA.t2k.a2m with 283 sequences, total weight= 61.7127 avg weight= 0.218066 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30047 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ouwA/info/1ouwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1ouwA/nostruct-align/1ouwA.t2k.a2m.gz, have 646359 columns in 2851 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2iwkA/nostruct-align/2iwkA.t2k.a2m.gz
# 2iwkA.t2k.a2m with 5738 sequences, total weight= 74.6589 avg weight= 0.0130113 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2iwkA/info/2iwkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2iwkA/nostruct-align/2iwkA.t2k.a2m.gz, have 646949 columns in 2852 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h99A/nostruct-align/1h99A.t2k.a2m.gz
# 1h99A.t2k.a2m with 198 sequences, total weight= 198 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13547 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h99A/info/1h99A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h99A/nostruct-align/1h99A.t2k.a2m.gz, have 647169 columns in 2853 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c9oA/nostruct-align/1c9oA.t2k.a2m.gz
# 1c9oA.t2k.a2m with 317 sequences, total weight= 15.0528 avg weight= 0.0474853 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c9oA/info/1c9oA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1c9oA/nostruct-align/1c9oA.t2k.a2m.gz, have 647235 columns in 2854 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hd2A/nostruct-align/1hd2A.t2k.a2m.gz
# 1hd2A.t2k.a2m with 654 sequences, total weight= 103.911 avg weight= 0.158886 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30411 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hd2A/info/1hd2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hd2A/nostruct-align/1hd2A.t2k.a2m.gz, have 647396 columns in 2855 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2h88C/nostruct-align/2h88C.t2k.a2m.gz
# 2h88C.t2k.a2m with 323 sequences, total weight= 81.9259 avg weight= 0.253641 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2h88C/info/2h88C.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2h88C/nostruct-align/2h88C.t2k.a2m.gz, have 647535 columns in 2856 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2g7sA/nostruct-align/2g7sA.t2k.a2m.gz
# 2g7sA.t2k.a2m with 2697 sequences, total weight= 2697 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.86308 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2g7sA/info/2g7sA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2g7sA/nostruct-align/2g7sA.t2k.a2m.gz, have 647725 columns in 2857 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n7sD/nostruct-align/1n7sD.t2k.a2m.gz
# 1n7sD.t2k.a2m with 78 sequences, total weight= 15.4926 avg weight= 0.198623 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n7sD/info/1n7sD.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1n7sD/nostruct-align/1n7sD.t2k.a2m.gz, have 647791 columns in 2858 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f6bA/nostruct-align/1f6bA.t2k.a2m.gz
# 1f6bA.t2k.a2m with 1749 sequences, total weight= 1749 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24148 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f6bA/info/1f6bA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1f6bA/nostruct-align/1f6bA.t2k.a2m.gz, have 647967 columns in 2859 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xgsA/nostruct-align/1xgsA.t2k.a2m.gz
# 1xgsA.t2k.a2m with 602 sequences, total weight= 281.545 avg weight= 0.467682 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30456 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xgsA/info/1xgsA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xgsA/nostruct-align/1xgsA.t2k.a2m.gz, have 648262 columns in 2860 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gppA/nostruct-align/1gppA.t2k.a2m.gz
# 1gppA.t2k.a2m with 53 sequences, total weight= 14.1232 avg weight= 0.266476 27 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gppA/info/1gppA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gppA/nostruct-align/1gppA.t2k.a2m.gz, have 648479 columns in 2861 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zd9A/nostruct-align/1zd9A.t2k.a2m.gz
# 1zd9A.t2k.a2m with 5637 sequences, total weight= 5637 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25016 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zd9A/info/1zd9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zd9A/nostruct-align/1zd9A.t2k.a2m.gz, have 648645 columns in 2862 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m6iA/nostruct-align/1m6iA.t2k.a2m.gz
# 1m6iA.t2k.a2m with 1256 sequences, total weight= 1256 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06863 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m6iA/info/1m6iA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m6iA/nostruct-align/1m6iA.t2k.a2m.gz, have 649104 columns in 2863 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1es9A/nostruct-align/1es9A.t2k.a2m.gz
# 1es9A.t2k.a2m with 100 sequences, total weight= 100 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1576 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1es9A/info/1es9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1es9A/nostruct-align/1es9A.t2k.a2m.gz, have 649316 columns in 2864 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q7lA/nostruct-align/1q7lA.t2k.a2m.gz
# 1q7lA.t2k.a2m with 497 sequences, total weight= 497 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22271 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q7lA/info/1q7lA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1q7lA/nostruct-align/1q7lA.t2k.a2m.gz, have 649508 columns in 2865 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1te2A/nostruct-align/1te2A.t2k.a2m.gz
# 1te2A.t2k.a2m with 1042 sequences, total weight= 1042 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08712 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1te2A/info/1te2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1te2A/nostruct-align/1te2A.t2k.a2m.gz, have 649726 columns in 2866 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54F/nostruct-align/1v54F.t2k.a2m.gz
# 1v54F.t2k.a2m with 36 sequences, total weight= 9.4941 avg weight= 0.263725 22 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54F/info/1v54F.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v54F/nostruct-align/1v54F.t2k.a2m.gz, have 649824 columns in 2867 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v5iB/nostruct-align/1v5iB.t2k.a2m.gz
# 1v5iB.t2k.a2m with 70 sequences, total weight= 20.7352 avg weight= 0.296218 35 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v5iB/info/1v5iB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v5iB/nostruct-align/1v5iB.t2k.a2m.gz, have 649900 columns in 2868 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1z1lA/nostruct-align/1z1lA.t2k.a2m.gz
# 1z1lA.t2k.a2m with 663 sequences, total weight= 110.936 avg weight= 0.167325 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30404 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1z1lA/info/1z1lA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1z1lA/nostruct-align/1z1lA.t2k.a2m.gz, have 650238 columns in 2869 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xe0A/nostruct-align/1xe0A.t2k.a2m.gz
# 1xe0A.t2k.a2m with 89 sequences, total weight= 8.32567 avg weight= 0.0935469 24 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xe0A/info/1xe0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xe0A/nostruct-align/1xe0A.t2k.a2m.gz, have 650346 columns in 2870 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bjdA/nostruct-align/2bjdA.t2k.a2m.gz
# 2bjdA.t2k.a2m with 455 sequences, total weight= 64.8859 avg weight= 0.142606 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bjdA/info/2bjdA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bjdA/nostruct-align/2bjdA.t2k.a2m.gz, have 650436 columns in 2871 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yge/nostruct-align/1yge.t2k.a2m.gz
# 1yge.t2k.a2m with 226 sequences, total weight= 27.1937 avg weight= 0.120326 39 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yge/info/1yge.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yge/nostruct-align/1yge.t2k.a2m.gz, have 651275 columns in 2872 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p57A/nostruct-align/1p57A.t2k.a2m.gz
# 1p57A.t2k.a2m with 289 sequences, total weight= 76.337 avg weight= 0.264142 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30063 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p57A/info/1p57A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1p57A/nostruct-align/1p57A.t2k.a2m.gz, have 651385 columns in 2873 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uptB/nostruct-align/1uptB.t2k.a2m.gz
# 1uptB.t2k.a2m with 11 sequences, total weight= 3.37173 avg weight= 0.306521 12 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uptB/info/1uptB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uptB/nostruct-align/1uptB.t2k.a2m.gz, have 651443 columns in 2874 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2oqkA/nostruct-align/2oqkA.t2k.a2m.gz
# 2oqkA.t2k.a2m with 226 sequences, total weight= 20.0718 avg weight= 0.0888132 35 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2oqkA/info/2oqkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2oqkA/nostruct-align/2oqkA.t2k.a2m.gz, have 651537 columns in 2875 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vlyA/nostruct-align/1vlyA.t2k.a2m.gz
# 1vlyA.t2k.a2m with 173 sequences, total weight= 173 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20513 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vlyA/info/1vlyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vlyA/nostruct-align/1vlyA.t2k.a2m.gz, have 651860 columns in 2876 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u7iA/nostruct-align/1u7iA.t2k.a2m.gz
# 1u7iA.t2k.a2m with 172 sequences, total weight= 70.8216 avg weight= 0.411754 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u7iA/info/1u7iA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1u7iA/nostruct-align/1u7iA.t2k.a2m.gz, have 651994 columns in 2877 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vp8A/nostruct-align/1vp8A.t2k.a2m.gz
# 1vp8A.t2k.a2m with 13 sequences, total weight= 4.02781 avg weight= 0.309832 18 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vp8A/info/1vp8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vp8A/nostruct-align/1vp8A.t2k.a2m.gz, have 652184 columns in 2878 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1khiA/nostruct-align/1khiA.t2k.a2m.gz
# 1khiA.t2k.a2m with 101 sequences, total weight= 10.3111 avg weight= 0.10209 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1khiA/info/1khiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1khiA/nostruct-align/1khiA.t2k.a2m.gz, have 652331 columns in 2879 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gq8A/nostruct-align/1gq8A.t2k.a2m.gz
# 1gq8A.t2k.a2m with 276 sequences, total weight= 33.7133 avg weight= 0.12215 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gq8A/info/1gq8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gq8A/nostruct-align/1gq8A.t2k.a2m.gz, have 652650 columns in 2880 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bgkA/nostruct-align/2bgkA.t2k.a2m.gz
# 2bgkA.t2k.a2m with 8091 sequences, total weight= 8091 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28366 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bgkA/info/2bgkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bgkA/nostruct-align/2bgkA.t2k.a2m.gz, have 652917 columns in 2881 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wlyA/nostruct-align/1wlyA.t2k.a2m.gz
# 1wlyA.t2k.a2m with 3786 sequences, total weight= 3786 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17739 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wlyA/info/1wlyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wlyA/nostruct-align/1wlyA.t2k.a2m.gz, have 653239 columns in 2882 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ujnA/nostruct-align/1ujnA.t2k.a2m.gz
# 1ujnA.t2k.a2m with 230 sequences, total weight= 95.1099 avg weight= 0.413521 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30074 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ujnA/info/1ujnA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1ujnA/nostruct-align/1ujnA.t2k.a2m.gz, have 653577 columns in 2883 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gkmA/nostruct-align/1gkmA.t2k.a2m.gz
# 1gkmA.t2k.a2m with 275 sequences, total weight= 19.7667 avg weight= 0.071879 39 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gkmA/info/1gkmA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gkmA/nostruct-align/1gkmA.t2k.a2m.gz, have 654086 columns in 2884 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k38A/nostruct-align/1k38A.t2k.a2m.gz
# 1k38A.t2k.a2m with 127 sequences, total weight= 32.0093 avg weight= 0.252042 43 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k38A/info/1k38A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1k38A/nostruct-align/1k38A.t2k.a2m.gz, have 654325 columns in 2885 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t4hA/nostruct-align/1t4hA.t2k.a2m.gz
# 1t4hA.t2k.a2m with 16288 sequences, total weight= 16288 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19405 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t4hA/info/1t4hA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1t4hA/nostruct-align/1t4hA.t2k.a2m.gz, have 654595 columns in 2886 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mtyD/nostruct-align/1mtyD.t2k.a2m.gz
# 1mtyD.t2k.a2m with 195 sequences, total weight= 27.0558 avg weight= 0.138748 32 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mtyD/info/1mtyD.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mtyD/nostruct-align/1mtyD.t2k.a2m.gz, have 655107 columns in 2887 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yllA/nostruct-align/1yllA.t2k.a2m.gz
# 1yllA.t2k.a2m with 56 sequences, total weight= 27.9202 avg weight= 0.498574 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yllA/info/1yllA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yllA/nostruct-align/1yllA.t2k.a2m.gz, have 655297 columns in 2888 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rxqA/nostruct-align/1rxqA.t2k.a2m.gz
# 1rxqA.t2k.a2m with 39 sequences, total weight= 33.7557 avg weight= 0.865531 30 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rxqA/info/1rxqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rxqA/nostruct-align/1rxqA.t2k.a2m.gz, have 655471 columns in 2889 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dk8A/nostruct-align/1dk8A.t2k.a2m.gz
# 1dk8A.t2k.a2m with 338 sequences, total weight= 91.7635 avg weight= 0.27149 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30122 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dk8A/info/1dk8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dk8A/nostruct-align/1dk8A.t2k.a2m.gz, have 655618 columns in 2890 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eokA/nostruct-align/1eokA.t2k.a2m.gz
# 1eokA.t2k.a2m with 55 sequences, total weight= 50.1912 avg weight= 0.912567 29 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eokA/info/1eokA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1eokA/nostruct-align/1eokA.t2k.a2m.gz, have 655900 columns in 2891 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uehA/nostruct-align/1uehA.t2k.a2m.gz
# 1uehA.t2k.a2m with 268 sequences, total weight= 27.2404 avg weight= 0.101643 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uehA/info/1uehA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uehA/nostruct-align/1uehA.t2k.a2m.gz, have 656114 columns in 2892 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2o8jA/nostruct-align/2o8jA.t2k.a2m.gz
# 2o8jA.t2k.a2m with 1504 sequences, total weight= 1504 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09479 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2o8jA/info/2o8jA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2o8jA/nostruct-align/2o8jA.t2k.a2m.gz, have 656368 columns in 2893 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m6kA/nostruct-align/1m6kA.t2k.a2m.gz
# 1m6kA.t2k.a2m with 100 sequences, total weight= 44.0729 avg weight= 0.440729 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m6kA/info/1m6kA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m6kA/nostruct-align/1m6kA.t2k.a2m.gz, have 656618 columns in 2894 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tr0A/nostruct-align/1tr0A.t2k.a2m.gz
# 1tr0A.t2k.a2m with 52 sequences, total weight= 39.6279 avg weight= 0.762075 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tr0A/info/1tr0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tr0A/nostruct-align/1tr0A.t2k.a2m.gz, have 656724 columns in 2895 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2oc3A/nostruct-align/2oc3A.t2k.a2m.gz
# 2oc3A.t2k.a2m with 2636 sequences, total weight= 924.47 avg weight= 0.350709 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32318 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2oc3A/info/2oc3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2oc3A/nostruct-align/2oc3A.t2k.a2m.gz, have 657003 columns in 2896 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wmsA/nostruct-align/1wmsA.t2k.a2m.gz
# 1wmsA.t2k.a2m with 4091 sequences, total weight= 1434.86 avg weight= 0.350735 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3306 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wmsA/info/1wmsA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wmsA/nostruct-align/1wmsA.t2k.a2m.gz, have 657173 columns in 2897 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2ootA/nostruct-align/2ootA.t2k.a2m.gz
# 2ootA.t2k.a2m with 972 sequences, total weight= 972 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03355 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2ootA/info/2ootA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2ootA/nostruct-align/2ootA.t2k.a2m.gz, have 657859 columns in 2898 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vfrA/nostruct-align/1vfrA.t2k.a2m.gz
# 1vfrA.t2k.a2m with 348 sequences, total weight= 348 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16894 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vfrA/info/1vfrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vfrA/nostruct-align/1vfrA.t2k.a2m.gz, have 658076 columns in 2899 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r2zA/nostruct-align/1r2zA.t2k.a2m.gz
# 1r2zA.t2k.a2m with 200 sequences, total weight= 51.1368 avg weight= 0.255684 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r2zA/info/1r2zA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r2zA/nostruct-align/1r2zA.t2k.a2m.gz, have 658349 columns in 2900 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y2kA/nostruct-align/1y2kA.t2k.a2m.gz
# 1y2kA.t2k.a2m with 542 sequences, total weight= 47.4065 avg weight= 0.0874659 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30058 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y2kA/info/1y2kA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1y2kA/nostruct-align/1y2kA.t2k.a2m.gz, have 658675 columns in 2901 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i52A/nostruct-align/1i52A.t2k.a2m.gz
# 1i52A.t2k.a2m with 295 sequences, total weight= 295 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14743 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i52A/info/1i52A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1i52A/nostruct-align/1i52A.t2k.a2m.gz, have 658900 columns in 2902 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bfdA/nostruct-align/2bfdA.t2k.a2m.gz
# 2bfdA.t2k.a2m with 961 sequences, total weight= 287.715 avg weight= 0.299391 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30582 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bfdA/info/2bfdA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bfdA/nostruct-align/2bfdA.t2k.a2m.gz, have 659274 columns in 2903 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zl0A/nostruct-align/1zl0A.t2k.a2m.gz
# 1zl0A.t2k.a2m with 203 sequences, total weight= 109.846 avg weight= 0.541114 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30129 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zl0A/info/1zl0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zl0A/nostruct-align/1zl0A.t2k.a2m.gz, have 659580 columns in 2904 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2ooaA/nostruct-align/2ooaA.t2k.a2m.gz
# 2ooaA.t2k.a2m with 48 sequences, total weight= 3.01519 avg weight= 0.0628164 14 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2ooaA/info/2ooaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2ooaA/nostruct-align/2ooaA.t2k.a2m.gz, have 659622 columns in 2905 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d2vC/nostruct-align/1d2vC.t2k.a2m.gz
# 1d2vC.t2k.a2m with 251 sequences, total weight= 73.4245 avg weight= 0.292528 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30063 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d2vC/info/1d2vC.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1d2vC/nostruct-align/1d2vC.t2k.a2m.gz, have 660088 columns in 2906 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yukA/nostruct-align/1yukA.t2k.a2m.gz
# 1yukA.t2k.a2m with 217 sequences, total weight= 22.2347 avg weight= 0.102464 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yukA/info/1yukA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yukA/nostruct-align/1yukA.t2k.a2m.gz, have 660182 columns in 2907 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1z70X/nostruct-align/1z70X.t2k.a2m.gz
# 1z70X.t2k.a2m with 452 sequences, total weight= 452 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20305 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1z70X/info/1z70X.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1z70X/nostruct-align/1z70X.t2k.a2m.gz, have 660458 columns in 2908 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x6iA/nostruct-align/1x6iA.t2k.a2m.gz
# 1x6iA.t2k.a2m with 124 sequences, total weight= 34.7617 avg weight= 0.280336 43 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x6iA/info/1x6iA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1x6iA/nostruct-align/1x6iA.t2k.a2m.gz, have 660547 columns in 2909 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2t/2tgi/nostruct-align/2tgi.t2k.a2m.gz
# 2tgi.t2k.a2m with 482 sequences, total weight= 33.8585 avg weight= 0.070246 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2t/2tgi/info/2tgi.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2t/2tgi/nostruct-align/2tgi.t2k.a2m.gz, have 660659 columns in 2910 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2i4aA/nostruct-align/2i4aA.t2k.a2m.gz
# 2i4aA.t2k.a2m with 5541 sequences, total weight= 5541 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19274 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2i4aA/info/2i4aA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2i4aA/nostruct-align/2i4aA.t2k.a2m.gz, have 660766 columns in 2911 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zk5A/nostruct-align/1zk5A.t2k.a2m.gz
# 1zk5A.t2k.a2m with 14 sequences, total weight= 1.87576 avg weight= 0.133983 8 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zk5A/info/1zk5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zk5A/nostruct-align/1zk5A.t2k.a2m.gz, have 660938 columns in 2912 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l3kA/nostruct-align/1l3kA.t2k.a2m.gz
# 1l3kA.t2k.a2m with 2117 sequences, total weight= 2117 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.262 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l3kA/info/1l3kA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1l3kA/nostruct-align/1l3kA.t2k.a2m.gz, have 661101 columns in 2913 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qv1A/nostruct-align/1qv1A.t2k.a2m.gz
# 1qv1A.t2k.a2m with 1292 sequences, total weight= 1292 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22392 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qv1A/info/1qv1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qv1A/nostruct-align/1qv1A.t2k.a2m.gz, have 661288 columns in 2914 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xs1A/nostruct-align/1xs1A.t2k.a2m.gz
# 1xs1A.t2k.a2m with 452 sequences, total weight= 121.805 avg weight= 0.26948 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30325 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xs1A/info/1xs1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xs1A/nostruct-align/1xs1A.t2k.a2m.gz, have 661481 columns in 2915 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vpmA/nostruct-align/1vpmA.t2k.a2m.gz
# 1vpmA.t2k.a2m with 444 sequences, total weight= 444 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29822 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vpmA/info/1vpmA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vpmA/nostruct-align/1vpmA.t2k.a2m.gz, have 661636 columns in 2916 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k77A/nostruct-align/1k77A.t2k.a2m.gz
# 1k77A.t2k.a2m with 197 sequences, total weight= 197 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27876 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k77A/info/1k77A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1k77A/nostruct-align/1k77A.t2k.a2m.gz, have 661896 columns in 2917 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ualA/nostruct-align/1ualA.t2k.a2m.gz
# 1ualA.t2k.a2m with 141 sequences, total weight= 9.28072 avg weight= 0.0658207 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ualA/info/1ualA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1ualA/nostruct-align/1ualA.t2k.a2m.gz, have 662139 columns in 2918 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2o2kA/nostruct-align/2o2kA.t2k.a2m.gz
# 2o2kA.t2k.a2m with 400 sequences, total weight= 26.6348 avg weight= 0.066587 42 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2o2kA/info/2o2kA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2o2kA/nostruct-align/2o2kA.t2k.a2m.gz, have 662471 columns in 2919 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2d1eA/nostruct-align/2d1eA.t2k.a2m.gz
# 2d1eA.t2k.a2m with 70 sequences, total weight= 29.4884 avg weight= 0.421263 41 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2d1eA/info/2d1eA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2d1eA/nostruct-align/2d1eA.t2k.a2m.gz, have 662714 columns in 2920 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jh6A/nostruct-align/1jh6A.t2k.a2m.gz
# 1jh6A.t2k.a2m with 21 sequences, total weight= 21 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26682 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jh6A/info/1jh6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jh6A/nostruct-align/1jh6A.t2k.a2m.gz, have 662895 columns in 2921 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iu8A/nostruct-align/1iu8A.t2k.a2m.gz
# 1iu8A.t2k.a2m with 73 sequences, total weight= 25.272 avg weight= 0.346192 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iu8A/info/1iu8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1iu8A/nostruct-align/1iu8A.t2k.a2m.gz, have 663101 columns in 2922 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2a13A/nostruct-align/2a13A.t2k.a2m.gz
# 2a13A.t2k.a2m with 68 sequences, total weight= 25.3196 avg weight= 0.372347 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2a13A/info/2a13A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2a13A/nostruct-align/2a13A.t2k.a2m.gz, have 663254 columns in 2923 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jl0A/nostruct-align/1jl0A.t2k.a2m.gz
# 1jl0A.t2k.a2m with 105 sequences, total weight= 15.405 avg weight= 0.146714 31 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jl0A/info/1jl0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jl0A/nostruct-align/1jl0A.t2k.a2m.gz, have 663564 columns in 2924 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dl5A/nostruct-align/1dl5A.t2k.a2m.gz
# 1dl5A.t2k.a2m with 512 sequences, total weight= 512 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.891395 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dl5A/info/1dl5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dl5A/nostruct-align/1dl5A.t2k.a2m.gz, have 663881 columns in 2925 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gtfA/nostruct-align/1gtfA.t2k.a2m.gz
# 1gtfA.t2k.a2m with 29 sequences, total weight= 2.62206 avg weight= 0.0904158 14 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gtfA/info/1gtfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gtfA/nostruct-align/1gtfA.t2k.a2m.gz, have 663950 columns in 2926 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w8kA/nostruct-align/1w8kA.t2k.a2m.gz
# 1w8kA.t2k.a2m with 321 sequences, total weight= 11.8322 avg weight= 0.0368606 26 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w8kA/info/1w8kA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w8kA/nostruct-align/1w8kA.t2k.a2m.gz, have 664312 columns in 2927 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2i6jA/nostruct-align/2i6jA.t2k.a2m.gz
# 2i6jA.t2k.a2m with 3706 sequences, total weight= 3706 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0462 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2i6jA/info/2i6jA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2i6jA/nostruct-align/2i6jA.t2k.a2m.gz, have 664473 columns in 2928 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a92A/nostruct-align/1a92A.t2k.a2m.gz
# 1a92A.t2k.a2m with 85 sequences, total weight= 2.71645 avg weight= 0.0319583 16 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a92A/info/1a92A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1a92A/nostruct-align/1a92A.t2k.a2m.gz, have 664523 columns in 2929 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2inwA/nostruct-align/2inwA.t2k.a2m.gz
# 2inwA.t2k.a2m with 71 sequences, total weight= 4.2799 avg weight= 0.0602803 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2inwA/info/2inwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2inwA/nostruct-align/2inwA.t2k.a2m.gz, have 664640 columns in 2930 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q8dA/nostruct-align/1q8dA.t2k.a2m.gz
# 1q8dA.t2k.a2m with 58 sequences, total weight= 6.9565 avg weight= 0.11994 26 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q8dA/info/1q8dA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1q8dA/nostruct-align/1q8dA.t2k.a2m.gz, have 664740 columns in 2931 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xgkA/nostruct-align/1xgkA.t2k.a2m.gz
# 1xgkA.t2k.a2m with 292 sequences, total weight= 292 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04163 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xgkA/info/1xgkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xgkA/nostruct-align/1xgkA.t2k.a2m.gz, have 665065 columns in 2932 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1ts9A/nostruct-align/1ts9A.t2k.a2m.gz
# 1ts9A.t2k.a2m with 56 sequences, total weight= 24.9447 avg weight= 0.445442 35 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1ts9A/info/1ts9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1ts9A/nostruct-align/1ts9A.t2k.a2m.gz, have 665163 columns in 2933 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2og5A/nostruct-align/2og5A.t2k.a2m.gz
# 2og5A.t2k.a2m with 101 sequences, total weight= 101 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.975732 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2og5A/info/2og5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2og5A/nostruct-align/2og5A.t2k.a2m.gz, have 665478 columns in 2934 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wfbA/nostruct-align/1wfbA.t2k.a2m.gz
# 1wfbA.t2k.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.482265 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wfbA/info/1wfbA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wfbA/nostruct-align/1wfbA.t2k.a2m.gz, have 665515 columns in 2935 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bt6A/nostruct-align/2bt6A.t2k.a2m.gz
# 2bt6A.t2k.a2m with 375 sequences, total weight= 29.8172 avg weight= 0.0795124 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bt6A/info/2bt6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bt6A/nostruct-align/2bt6A.t2k.a2m.gz, have 665619 columns in 2936 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jubA/nostruct-align/1jubA.t2k.a2m.gz
# 1jubA.t2k.a2m with 352 sequences, total weight= 352 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27481 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jubA/info/1jubA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jubA/nostruct-align/1jubA.t2k.a2m.gz, have 665930 columns in 2937 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wehA/nostruct-align/1wehA.t2k.a2m.gz
# 1wehA.t2k.a2m with 310 sequences, total weight= 40.0847 avg weight= 0.129306 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wehA/info/1wehA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wehA/nostruct-align/1wehA.t2k.a2m.gz, have 666101 columns in 2938 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2i6vA/nostruct-align/2i6vA.t2k.a2m.gz
# 2i6vA.t2k.a2m with 483 sequences, total weight= 79.1975 avg weight= 0.16397 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30123 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2i6vA/info/2i6vA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2i6vA/nostruct-align/2i6vA.t2k.a2m.gz, have 666188 columns in 2939 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vhnA/nostruct-align/1vhnA.t2k.a2m.gz
# 1vhnA.t2k.a2m with 436 sequences, total weight= 360.263 avg weight= 0.826292 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30221 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vhnA/info/1vhnA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vhnA/nostruct-align/1vhnA.t2k.a2m.gz, have 666493 columns in 2940 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lyqA/nostruct-align/1lyqA.t2k.a2m.gz
# 1lyqA.t2k.a2m with 57 sequences, total weight= 19.9699 avg weight= 0.350349 39 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lyqA/info/1lyqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lyqA/nostruct-align/1lyqA.t2k.a2m.gz, have 666594 columns in 2941 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r29A/nostruct-align/1r29A.t2k.a2m.gz
# 1r29A.t2k.a2m with 1438 sequences, total weight= 738.191 avg weight= 0.513346 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31468 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r29A/info/1r29A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r29A/nostruct-align/1r29A.t2k.a2m.gz, have 666716 columns in 2942 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hngA/nostruct-align/2hngA.t2k.a2m.gz
# 2hngA.t2k.a2m with 25 sequences, total weight= 7.88483 avg weight= 0.315393 24 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hngA/info/2hngA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hngA/nostruct-align/2hngA.t2k.a2m.gz, have 666841 columns in 2943 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1ng2A/nostruct-align/1ng2A.t2k.a2m.gz
# 1ng2A.t2k.a2m with 1429 sequences, total weight= 1429 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26952 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1ng2A/info/1ng2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1ng2A/nostruct-align/1ng2A.t2k.a2m.gz, have 667017 columns in 2944 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bgxA/nostruct-align/2bgxA.t2k.a2m.gz
# 2bgxA.t2k.a2m with 423 sequences, total weight= 187.493 avg weight= 0.443246 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30186 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bgxA/info/2bgxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bgxA/nostruct-align/2bgxA.t2k.a2m.gz, have 667271 columns in 2945 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rwjA/nostruct-align/1rwjA.t2k.a2m.gz
# 1rwjA.t2k.a2m with 29 sequences, total weight= 8.17004 avg weight= 0.281726 29 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rwjA/info/1rwjA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rwjA/nostruct-align/1rwjA.t2k.a2m.gz, have 667352 columns in 2946 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m45B/nostruct-align/1m45B.t2k.a2m.gz
# 1m45B.t2k.a2m with 6 sequences, total weight= 1.9496 avg weight= 0.324934 6 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m45B/info/1m45B.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m45B/nostruct-align/1m45B.t2k.a2m.gz, have 667377 columns in 2947 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2dx6A/nostruct-align/2dx6A.t2k.a2m.gz
# 2dx6A.t2k.a2m with 1011 sequences, total weight= 262.413 avg weight= 0.259558 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31252 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2dx6A/info/2dx6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2dx6A/nostruct-align/2dx6A.t2k.a2m.gz, have 667535 columns in 2948 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bemA/nostruct-align/2bemA.t2k.a2m.gz
# 2bemA.t2k.a2m with 104 sequences, total weight= 23.4941 avg weight= 0.225905 43 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bemA/info/2bemA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bemA/nostruct-align/2bemA.t2k.a2m.gz, have 667705 columns in 2949 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nn8A/nostruct-align/2nn8A.t2k.a2m.gz
# 2nn8A.t2k.a2m with 720 sequences, total weight= 139.25 avg weight= 0.193403 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30738 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nn8A/info/2nn8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2n/2nn8A/nostruct-align/2nn8A.t2k.a2m.gz, have 667843 columns in 2950 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g6uA/nostruct-align/1g6uA.t2k.a2m.gz
# 1g6uA.t2k.a2m with 2 sequences, total weight= 1.97356 avg weight= 0.986782 5 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g6uA/info/1g6uA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1g6uA/nostruct-align/1g6uA.t2k.a2m.gz, have 667891 columns in 2951 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xe7A/nostruct-align/1xe7A.t2k.a2m.gz
# 1xe7A.t2k.a2m with 60 sequences, total weight= 23.0227 avg weight= 0.383712 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xe7A/info/1xe7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xe7A/nostruct-align/1xe7A.t2k.a2m.gz, have 668077 columns in 2952 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bcqA/nostruct-align/2bcqA.t2k.a2m.gz
# 2bcqA.t2k.a2m with 304 sequences, total weight= 112.36 avg weight= 0.369606 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3027 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bcqA/info/2bcqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bcqA/nostruct-align/2bcqA.t2k.a2m.gz, have 668401 columns in 2953 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lu4A/nostruct-align/1lu4A.t2k.a2m.gz
# 1lu4A.t2k.a2m with 1210 sequences, total weight= 1210 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17005 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lu4A/info/1lu4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lu4A/nostruct-align/1lu4A.t2k.a2m.gz, have 668535 columns in 2954 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x9iA/nostruct-align/1x9iA.t2k.a2m.gz
# 1x9iA.t2k.a2m with 277 sequences, total weight= 277 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27636 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x9iA/info/1x9iA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1x9iA/nostruct-align/1x9iA.t2k.a2m.gz, have 668835 columns in 2955 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hfkA/nostruct-align/2hfkA.t2k.a2m.gz
# 2hfkA.t2k.a2m with 125 sequences, total weight= 125 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22527 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hfkA/info/2hfkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hfkA/nostruct-align/2hfkA.t2k.a2m.gz, have 669115 columns in 2956 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2h6uA/nostruct-align/2h6uA.t2k.a2m.gz
# 2h6uA.t2k.a2m with 291 sequences, total weight= 16.3478 avg weight= 0.056178 45 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2h6uA/info/2h6uA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2h6uA/nostruct-align/2h6uA.t2k.a2m.gz, have 669229 columns in 2957 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w0uA/nostruct-align/1w0uA.t2k.a2m.gz
# 1w0uA.t2k.a2m with 961 sequences, total weight= 16.9826 avg weight= 0.0176718 45 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w0uA/info/1w0uA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w0uA/nostruct-align/1w0uA.t2k.a2m.gz, have 669284 columns in 2958 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s5uA/nostruct-align/1s5uA.t2k.a2m.gz
# 1s5uA.t2k.a2m with 296 sequences, total weight= 296 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22653 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s5uA/info/1s5uA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1s5uA/nostruct-align/1s5uA.t2k.a2m.gz, have 669413 columns in 2959 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2isbA/nostruct-align/2isbA.t2k.a2m.gz
# 2isbA.t2k.a2m with 376 sequences, total weight= 20.1677 avg weight= 0.0536375 42 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2isbA/info/2isbA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2isbA/nostruct-align/2isbA.t2k.a2m.gz, have 669597 columns in 2960 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pg6A/nostruct-align/1pg6A.t2k.a2m.gz
# 1pg6A.t2k.a2m with 94 sequences, total weight= 58.7487 avg weight= 0.624986 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pg6A/info/1pg6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pg6A/nostruct-align/1pg6A.t2k.a2m.gz, have 669813 columns in 2961 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fbnA/nostruct-align/2fbnA.t2k.a2m.gz
# 2fbnA.t2k.a2m with 4797 sequences, total weight= 4797 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.921908 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fbnA/info/2fbnA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fbnA/nostruct-align/2fbnA.t2k.a2m.gz, have 669966 columns in 2962 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bl0A/nostruct-align/2bl0A.t2k.a2m.gz
# 2bl0A.t2k.a2m with 587 sequences, total weight= 12.454 avg weight= 0.0212164 36 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bl0A/info/2bl0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bl0A/nostruct-align/2bl0A.t2k.a2m.gz, have 670029 columns in 2963 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o1yA/nostruct-align/1o1yA.t2k.a2m.gz
# 1o1yA.t2k.a2m with 711 sequences, total weight= 711 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1712 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o1yA/info/1o1yA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1o1yA/nostruct-align/1o1yA.t2k.a2m.gz, have 670259 columns in 2964 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hyp/nostruct-align/1hyp.t2k.a2m.gz
# 1hyp.t2k.a2m with 115 sequences, total weight= 7.247 avg weight= 0.0630174 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hyp/info/1hyp.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hyp/nostruct-align/1hyp.t2k.a2m.gz, have 670334 columns in 2965 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gj4A/nostruct-align/2gj4A.t2k.a2m.gz
# 2gj4A.t2k.a2m with 784 sequences, total weight= 51.4072 avg weight= 0.0655704 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30046 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gj4A/info/2gj4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gj4A/nostruct-align/2gj4A.t2k.a2m.gz, have 671137 columns in 2966 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1izcA/nostruct-align/1izcA.t2k.a2m.gz
# 1izcA.t2k.a2m with 125 sequences, total weight= 71.7707 avg weight= 0.574165 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1izcA/info/1izcA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1izcA/nostruct-align/1izcA.t2k.a2m.gz, have 671436 columns in 2967 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k8uA/nostruct-align/1k8uA.t2k.a2m.gz
# 1k8uA.t2k.a2m with 1281 sequences, total weight= 82.1484 avg weight= 0.0641283 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30146 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k8uA/info/1k8uA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1k8uA/nostruct-align/1k8uA.t2k.a2m.gz, have 671525 columns in 2968 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1arb/nostruct-align/1arb.t2k.a2m.gz
# 1arb.t2k.a2m with 85 sequences, total weight= 75.0857 avg weight= 0.883361 45 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1arb/info/1arb.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1arb/nostruct-align/1arb.t2k.a2m.gz, have 671788 columns in 2969 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qcxA/nostruct-align/1qcxA.t2k.a2m.gz
# 1qcxA.t2k.a2m with 210 sequences, total weight= 73.723 avg weight= 0.351062 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qcxA/info/1qcxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qcxA/nostruct-align/1qcxA.t2k.a2m.gz, have 672147 columns in 2970 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jyaA/nostruct-align/1jyaA.t2k.a2m.gz
# 1jyaA.t2k.a2m with 15 sequences, total weight= 4.89955 avg weight= 0.326637 15 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jyaA/info/1jyaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jyaA/nostruct-align/1jyaA.t2k.a2m.gz, have 672264 columns in 2971 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pyoA/nostruct-align/1pyoA.t2k.a2m.gz
# 1pyoA.t2k.a2m with 241 sequences, total weight= 36.2931 avg weight= 0.150594 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pyoA/info/1pyoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pyoA/nostruct-align/1pyoA.t2k.a2m.gz, have 672423 columns in 2972 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ydyA/nostruct-align/1ydyA.t2k.a2m.gz
# 1ydyA.t2k.a2m with 570 sequences, total weight= 570 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05309 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ydyA/info/1ydyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1ydyA/nostruct-align/1ydyA.t2k.a2m.gz, have 672751 columns in 2973 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i19A/nostruct-align/1i19A.t2k.a2m.gz
# 1i19A.t2k.a2m with 168 sequences, total weight= 168 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06705 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i19A/info/1i19A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1i19A/nostruct-align/1i19A.t2k.a2m.gz, have 673292 columns in 2974 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1go3E/nostruct-align/1go3E.t2k.a2m.gz
# 1go3E.t2k.a2m with 437 sequences, total weight= 437 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23324 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1go3E/info/1go3E.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1go3E/nostruct-align/1go3E.t2k.a2m.gz, have 673469 columns in 2975 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fo8A/nostruct-align/1fo8A.t2k.a2m.gz
# 1fo8A.t2k.a2m with 58 sequences, total weight= 7.12725 avg weight= 0.122884 24 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fo8A/info/1fo8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fo8A/nostruct-align/1fo8A.t2k.a2m.gz, have 673799 columns in 2976 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2d3yA/nostruct-align/2d3yA.t2k.a2m.gz
# 2d3yA.t2k.a2m with 448 sequences, total weight= 138.813 avg weight= 0.309851 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30098 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2d3yA/info/2d3yA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2d3yA/nostruct-align/2d3yA.t2k.a2m.gz, have 674018 columns in 2977 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bikB/nostruct-align/2bikB.t2k.a2m.gz
# 2bikB.t2k.a2m with 19152 sequences, total weight= 19152 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18432 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bikB/info/2bikB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bikB/nostruct-align/2bikB.t2k.a2m.gz, have 674291 columns in 2978 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x1tA/nostruct-align/1x1tA.t2k.a2m.gz
# 1x1tA.t2k.a2m with 11682 sequences, total weight= 2210.33 avg weight= 0.189208 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.35262 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x1tA/info/1x1tA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1x1tA/nostruct-align/1x1tA.t2k.a2m.gz, have 674527 columns in 2979 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m15A/nostruct-align/1m15A.t2k.a2m.gz
# 1m15A.t2k.a2m with 236 sequences, total weight= 18.7338 avg weight= 0.0793806 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m15A/info/1m15A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m15A/nostruct-align/1m15A.t2k.a2m.gz, have 674883 columns in 2980 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qlwA/nostruct-align/1qlwA.t2k.a2m.gz
# 1qlwA.t2k.a2m with 70 sequences, total weight= 70 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17059 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qlwA/info/1qlwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qlwA/nostruct-align/1qlwA.t2k.a2m.gz, have 675201 columns in 2981 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bx7/nostruct-align/1bx7.t2k.a2m.gz
# 1bx7.t2k.a2m with 25 sequences, total weight= 3.29818 avg weight= 0.131927 23 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bx7/info/1bx7.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1bx7/nostruct-align/1bx7.t2k.a2m.gz, have 675252 columns in 2982 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1elkA/nostruct-align/1elkA.t2k.a2m.gz
# 1elkA.t2k.a2m with 129 sequences, total weight= 34.7037 avg weight= 0.269021 43 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1elkA/info/1elkA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1elkA/nostruct-align/1elkA.t2k.a2m.gz, have 675405 columns in 2983 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2brjA/nostruct-align/2brjA.t2k.a2m.gz
# 2brjA.t2k.a2m with 27 sequences, total weight= 2.66748 avg weight= 0.0987954 14 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2brjA/info/2brjA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2brjA/nostruct-align/2brjA.t2k.a2m.gz, have 675579 columns in 2984 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mveA/nostruct-align/1mveA.t2k.a2m.gz
# 1mveA.t2k.a2m with 291 sequences, total weight= 178.88 avg weight= 0.614708 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30119 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mveA/info/1mveA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mveA/nostruct-align/1mveA.t2k.a2m.gz, have 675822 columns in 2985 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/25/256bA/nostruct-align/256bA.t2k.a2m.gz
# 256bA.t2k.a2m with 20 sequences, total weight= 7.32902 avg weight= 0.366451 19 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/25/256bA/info/256bA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/25/256bA/nostruct-align/256bA.t2k.a2m.gz, have 675928 columns in 2986 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54L/nostruct-align/1v54L.t2k.a2m.gz
# 1v54L.t2k.a2m with 20 sequences, total weight= 3.32815 avg weight= 0.166407 13 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54L/info/1v54L.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v54L/nostruct-align/1v54L.t2k.a2m.gz, have 675974 columns in 2987 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2ah5A/nostruct-align/2ah5A.t2k.a2m.gz
# 2ah5A.t2k.a2m with 931 sequences, total weight= 931 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04828 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2ah5A/info/2ah5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2ah5A/nostruct-align/2ah5A.t2k.a2m.gz, have 676184 columns in 2988 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1edg/nostruct-align/1edg.t2k.a2m.gz
# 1edg.t2k.a2m with 197 sequences, total weight= 197 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09789 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1edg/info/1edg.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1edg/nostruct-align/1edg.t2k.a2m.gz, have 676564 columns in 2989 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2oyoA/nostruct-align/2oyoA.t2k.a2m.gz
# 2oyoA.t2k.a2m with 823 sequences, total weight= 823 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21635 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2oyoA/info/2oyoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2oyoA/nostruct-align/2oyoA.t2k.a2m.gz, have 676750 columns in 2990 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w96A/nostruct-align/1w96A.t2k.a2m.gz
# 1w96A.t2k.a2m with 1763 sequences, total weight= 271.769 avg weight= 0.154151 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31298 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w96A/info/1w96A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w96A/nostruct-align/1w96A.t2k.a2m.gz, have 677299 columns in 2991 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xvqA/nostruct-align/1xvqA.t2k.a2m.gz
# 1xvqA.t2k.a2m with 923 sequences, total weight= 160.896 avg weight= 0.174318 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30631 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xvqA/info/1xvqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xvqA/nostruct-align/1xvqA.t2k.a2m.gz, have 677459 columns in 2992 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qv9A/nostruct-align/1qv9A.t2k.a2m.gz
# 1qv9A.t2k.a2m with 29 sequences, total weight= 4.36159 avg weight= 0.1504 19 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qv9A/info/1qv9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qv9A/nostruct-align/1qv9A.t2k.a2m.gz, have 677741 columns in 2993 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2dpmA/nostruct-align/2dpmA.t2k.a2m.gz
# 2dpmA.t2k.a2m with 142 sequences, total weight= 130.556 avg weight= 0.919406 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2dpmA/info/2dpmA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2dpmA/nostruct-align/2dpmA.t2k.a2m.gz, have 677999 columns in 2994 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2dq6A/nostruct-align/2dq6A.t2k.a2m.gz
# 2dq6A.t2k.a2m with 1283 sequences, total weight= 1283 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04001 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2dq6A/info/2dq6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2dq6A/nostruct-align/2dq6A.t2k.a2m.gz, have 678864 columns in 2995 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gwmA/nostruct-align/2gwmA.t2k.a2m.gz
# 2gwmA.t2k.a2m with 39 sequences, total weight= 32.973 avg weight= 0.845462 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gwmA/info/2gwmA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gwmA/nostruct-align/2gwmA.t2k.a2m.gz, have 679064 columns in 2996 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t56A/nostruct-align/1t56A.t2k.a2m.gz
# 1t56A.t2k.a2m with 1851 sequences, total weight= 1851 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.860691 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t56A/info/1t56A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1t56A/nostruct-align/1t56A.t2k.a2m.gz, have 679257 columns in 2997 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rwrA/nostruct-align/1rwrA.t2k.a2m.gz
# 1rwrA.t2k.a2m with 210 sequences, total weight= 140.178 avg weight= 0.667515 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30074 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rwrA/info/1rwrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rwrA/nostruct-align/1rwrA.t2k.a2m.gz, have 679554 columns in 2998 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lmiA/nostruct-align/1lmiA.t2k.a2m.gz
# 1lmiA.t2k.a2m with 20 sequences, total weight= 6.37043 avg weight= 0.318522 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lmiA/info/1lmiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lmiA/nostruct-align/1lmiA.t2k.a2m.gz, have 679685 columns in 2999 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2o7iA/nostruct-align/2o7iA.t2k.a2m.gz
# 2o7iA.t2k.a2m with 2825 sequences, total weight= 2825 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13392 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2o7iA/info/2o7iA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2o7iA/nostruct-align/2o7iA.t2k.a2m.gz, have 680267 columns in 3000 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fyeA/nostruct-align/1fyeA.t2k.a2m.gz
# 1fyeA.t2k.a2m with 47 sequences, total weight= 44.6242 avg weight= 0.949451 31 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fyeA/info/1fyeA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fyeA/nostruct-align/1fyeA.t2k.a2m.gz, have 680487 columns in 3001 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t2k.a2m.gz
# 1lucB.t2k.a2m with 276 sequences, total weight= 276 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13855 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lucB/info/1lucB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t2k.a2m.gz, have 680807 columns in 3002 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2asbA/nostruct-align/2asbA.t2k.a2m.gz
# 2asbA.t2k.a2m with 342 sequences, total weight= 18.2861 avg weight= 0.0534681 41 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2asbA/info/2asbA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2asbA/nostruct-align/2asbA.t2k.a2m.gz, have 681033 columns in 3003 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b5pA/nostruct-align/1b5pA.t2k.a2m.gz
# 1b5pA.t2k.a2m with 2706 sequences, total weight= 2706 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.943671 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b5pA/info/1b5pA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1b5pA/nostruct-align/1b5pA.t2k.a2m.gz, have 681415 columns in 3004 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gp0A/nostruct-align/1gp0A.t2k.a2m.gz
# 1gp0A.t2k.a2m with 328 sequences, total weight= 54.3465 avg weight= 0.165691 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30066 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gp0A/info/1gp0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gp0A/nostruct-align/1gp0A.t2k.a2m.gz, have 681548 columns in 3005 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2blfB/nostruct-align/2blfB.t2k.a2m.gz
# 2blfB.t2k.a2m with 36 sequences, total weight= 17.6976 avg weight= 0.4916 30 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2blfB/info/2blfB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2blfB/nostruct-align/2blfB.t2k.a2m.gz, have 681629 columns in 3006 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hpsA/nostruct-align/2hpsA.t2k.a2m.gz
# 2hpsA.t2k.a2m with 3657 sequences, total weight= 3657 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05931 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hpsA/info/2hpsA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hpsA/nostruct-align/2hpsA.t2k.a2m.gz, have 681813 columns in 3007 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1no5A/nostruct-align/1no5A.t2k.a2m.gz
# 1no5A.t2k.a2m with 186 sequences, total weight= 186 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2926 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1no5A/info/1no5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1no5A/nostruct-align/1no5A.t2k.a2m.gz, have 681913 columns in 3008 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fltX/nostruct-align/1fltX.t2k.a2m.gz
# 1fltX.t2k.a2m with 91 sequences, total weight= 27.5277 avg weight= 0.302503 35 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fltX/info/1fltX.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fltX/nostruct-align/1fltX.t2k.a2m.gz, have 682008 columns in 3009 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2dc3A/nostruct-align/2dc3A.t2k.a2m.gz
# 2dc3A.t2k.a2m with 1838 sequences, total weight= 170.097 avg weight= 0.0925445 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30556 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2dc3A/info/2dc3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2dc3A/nostruct-align/2dc3A.t2k.a2m.gz, have 682180 columns in 3010 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f9yA/nostruct-align/1f9yA.t2k.a2m.gz
# 1f9yA.t2k.a2m with 135 sequences, total weight= 24.7708 avg weight= 0.183488 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f9yA/info/1f9yA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1f9yA/nostruct-align/1f9yA.t2k.a2m.gz, have 682338 columns in 3011 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3e/3ezmA/nostruct-align/3ezmA.t2k.a2m.gz
# 3ezmA.t2k.a2m with 68 sequences, total weight= 39.8662 avg weight= 0.586268 43 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3e/3ezmA/info/3ezmA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/3e/3ezmA/nostruct-align/3ezmA.t2k.a2m.gz, have 682439 columns in 3012 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fl0A/nostruct-align/1fl0A.t2k.a2m.gz
# 1fl0A.t2k.a2m with 328 sequences, total weight= 41.4426 avg weight= 0.126349 38 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fl0A/info/1fl0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fl0A/nostruct-align/1fl0A.t2k.a2m.gz, have 682603 columns in 3013 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2awgA/nostruct-align/2awgA.t2k.a2m.gz
# 2awgA.t2k.a2m with 895 sequences, total weight= 78.6188 avg weight= 0.0878422 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30075 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2awgA/info/2awgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2awgA/nostruct-align/2awgA.t2k.a2m.gz, have 682721 columns in 3014 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h05A/nostruct-align/1h05A.t2k.a2m.gz
# 1h05A.t2k.a2m with 145 sequences, total weight= 8.6533 avg weight= 0.0596779 30 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h05A/info/1h05A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h05A/nostruct-align/1h05A.t2k.a2m.gz, have 682859 columns in 3015 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ewfA/nostruct-align/1ewfA.t2k.a2m.gz
# 1ewfA.t2k.a2m with 108 sequences, total weight= 102.648 avg weight= 0.950443 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ewfA/info/1ewfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1ewfA/nostruct-align/1ewfA.t2k.a2m.gz, have 683315 columns in 3016 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jekB/nostruct-align/1jekB.t2k.a2m.gz
# 1jekB.t2k.a2m with 17 sequences, total weight= 2.0671 avg weight= 0.121594 9 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jekB/info/1jekB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jekB/nostruct-align/1jekB.t2k.a2m.gz, have 683349 columns in 3017 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2j9wA/nostruct-align/2j9wA.t2k.a2m.gz
# 2j9wA.t2k.a2m with 62 sequences, total weight= 10.6529 avg weight= 0.171821 28 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2j9wA/info/2j9wA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2j9wA/nostruct-align/2j9wA.t2k.a2m.gz, have 683450 columns in 3018 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2f4qA/nostruct-align/2f4qA.t2k.a2m.gz
# 2f4qA.t2k.a2m with 213 sequences, total weight= 38.7774 avg weight= 0.182054 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2f4qA/info/2f4qA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2f4qA/nostruct-align/2f4qA.t2k.a2m.gz, have 683759 columns in 3019 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2f9fA/nostruct-align/2f9fA.t2k.a2m.gz
# 2f9fA.t2k.a2m with 4688 sequences, total weight= 4688 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16677 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2f9fA/info/2f9fA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2f9fA/nostruct-align/2f9fA.t2k.a2m.gz, have 683925 columns in 3020 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2np5A/nostruct-align/2np5A.t2k.a2m.gz
# 2np5A.t2k.a2m with 4953 sequences, total weight= 4953 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.853487 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2np5A/info/2np5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2n/2np5A/nostruct-align/2np5A.t2k.a2m.gz, have 684112 columns in 3021 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2o0qA/nostruct-align/2o0qA.t2k.a2m.gz
# 2o0qA.t2k.a2m with 125 sequences, total weight= 26.8474 avg weight= 0.21478 43 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2o0qA/info/2o0qA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2o0qA/nostruct-align/2o0qA.t2k.a2m.gz, have 684226 columns in 3022 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ejgA/nostruct-align/1ejgA.t2k.a2m.gz
# 1ejgA.t2k.a2m with 86 sequences, total weight= 7.18229 avg weight= 0.0835151 27 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ejgA/info/1ejgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1ejgA/nostruct-align/1ejgA.t2k.a2m.gz, have 684272 columns in 3023 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1onwA/nostruct-align/1onwA.t2k.a2m.gz
# 1onwA.t2k.a2m with 592 sequences, total weight= 592 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.971045 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1onwA/info/1onwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1onwA/nostruct-align/1onwA.t2k.a2m.gz, have 684648 columns in 3024 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1smxA/nostruct-align/1smxA.t2k.a2m.gz
# 1smxA.t2k.a2m with 362 sequences, total weight= 24.7897 avg weight= 0.0684799 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1smxA/info/1smxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1smxA/nostruct-align/1smxA.t2k.a2m.gz, have 684735 columns in 3025 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fyfA/nostruct-align/2fyfA.t2k.a2m.gz
# 2fyfA.t2k.a2m with 1012 sequences, total weight= 1012 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23928 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fyfA/info/2fyfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fyfA/nostruct-align/2fyfA.t2k.a2m.gz, have 685103 columns in 3026 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bz6H/nostruct-align/2bz6H.t2k.a2m.gz
# 2bz6H.t2k.a2m with 4728 sequences, total weight= 4728 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29886 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bz6H/info/2bz6H.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bz6H/nostruct-align/2bz6H.t2k.a2m.gz, have 685357 columns in 3027 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2b7kA/nostruct-align/2b7kA.t2k.a2m.gz
# 2b7kA.t2k.a2m with 505 sequences, total weight= 138.646 avg weight= 0.274546 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30217 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2b7kA/info/2b7kA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2b7kA/nostruct-align/2b7kA.t2k.a2m.gz, have 685512 columns in 3028 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jfuA/nostruct-align/1jfuA.t2k.a2m.gz
# 1jfuA.t2k.a2m with 765 sequences, total weight= 765 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06151 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jfuA/info/1jfuA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jfuA/nostruct-align/1jfuA.t2k.a2m.gz, have 685688 columns in 3029 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tuoA/nostruct-align/1tuoA.t2k.a2m.gz
# 1tuoA.t2k.a2m with 1611 sequences, total weight= 1611 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25325 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tuoA/info/1tuoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tuoA/nostruct-align/1tuoA.t2k.a2m.gz, have 686125 columns in 3030 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nr4A/nostruct-align/1nr4A.t2k.a2m.gz
# 1nr4A.t2k.a2m with 370 sequences, total weight= 46.1399 avg weight= 0.124703 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nr4A/info/1nr4A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nr4A/nostruct-align/1nr4A.t2k.a2m.gz, have 686192 columns in 3031 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2flhA/nostruct-align/2flhA.t2k.a2m.gz
# 2flhA.t2k.a2m with 465 sequences, total weight= 51.1028 avg weight= 0.109898 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30029 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2flhA/info/2flhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2flhA/nostruct-align/2flhA.t2k.a2m.gz, have 686336 columns in 3032 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jer/nostruct-align/1jer.t2k.a2m.gz
# 1jer.t2k.a2m with 130 sequences, total weight= 26.1781 avg weight= 0.20137 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jer/info/1jer.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jer/nostruct-align/1jer.t2k.a2m.gz, have 686446 columns in 3033 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2agyD/nostruct-align/2agyD.t2k.a2m.gz
# 2agyD.t2k.a2m with 26 sequences, total weight= 3.15884 avg weight= 0.121494 19 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2agyD/info/2agyD.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2agyD/nostruct-align/2agyD.t2k.a2m.gz, have 686555 columns in 3034 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bgiA/nostruct-align/2bgiA.t2k.a2m.gz
# 2bgiA.t2k.a2m with 879 sequences, total weight= 879 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14232 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bgiA/info/2bgiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bgiA/nostruct-align/2bgiA.t2k.a2m.gz, have 686812 columns in 3035 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2iz6A/nostruct-align/2iz6A.t2k.a2m.gz
# 2iz6A.t2k.a2m with 413 sequences, total weight= 58.3394 avg weight= 0.141258 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30061 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2iz6A/info/2iz6A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2iz6A/nostruct-align/2iz6A.t2k.a2m.gz, have 686971 columns in 3036 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gqnA/nostruct-align/1gqnA.t2k.a2m.gz
# 1gqnA.t2k.a2m with 73 sequences, total weight= 38.4961 avg weight= 0.527344 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gqnA/info/1gqnA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gqnA/nostruct-align/1gqnA.t2k.a2m.gz, have 687223 columns in 3037 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rtqA/nostruct-align/1rtqA.t2k.a2m.gz
# 1rtqA.t2k.a2m with 384 sequences, total weight= 384 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00963 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rtqA/info/1rtqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rtqA/nostruct-align/1rtqA.t2k.a2m.gz, have 687514 columns in 3038 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v6pA/nostruct-align/1v6pA.t2k.a2m.gz
# 1v6pA.t2k.a2m with 374 sequences, total weight= 16.8405 avg weight= 0.045028 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v6pA/info/1v6pA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v6pA/nostruct-align/1v6pA.t2k.a2m.gz, have 687576 columns in 3039 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e4mM/nostruct-align/1e4mM.t2k.a2m.gz
# 1e4mM.t2k.a2m with 412 sequences, total weight= 55.4627 avg weight= 0.134618 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30065 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e4mM/info/1e4mM.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1e4mM/nostruct-align/1e4mM.t2k.a2m.gz, have 688075 columns in 3040 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cy5A/nostruct-align/1cy5A.t2k.a2m.gz
# 1cy5A.t2k.a2m with 35 sequences, total weight= 5.27959 avg weight= 0.150846 18 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cy5A/info/1cy5A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1cy5A/nostruct-align/1cy5A.t2k.a2m.gz, have 688167 columns in 3041 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1azo/nostruct-align/1azo.t2k.a2m.gz
# 1azo.t2k.a2m with 32 sequences, total weight= 5.79176 avg weight= 0.180993 20 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1azo/info/1azo.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1a/1azo/nostruct-align/1azo.t2k.a2m.gz, have 688381 columns in 3042 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wl8A/nostruct-align/1wl8A.t2k.a2m.gz
# 1wl8A.t2k.a2m with 2401 sequences, total weight= 2401 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18565 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wl8A/info/1wl8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wl8A/nostruct-align/1wl8A.t2k.a2m.gz, have 688568 columns in 3043 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fmb/nostruct-align/1fmb.t2k.a2m.gz
# 1fmb.t2k.a2m with 12473 sequences, total weight= 16.7228 avg weight= 0.00134072 43 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fmb/info/1fmb.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fmb/nostruct-align/1fmb.t2k.a2m.gz, have 688672 columns in 3044 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g6sA/nostruct-align/1g6sA.t2k.a2m.gz
# 1g6sA.t2k.a2m with 457 sequences, total weight= 71.8851 avg weight= 0.157298 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30159 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g6sA/info/1g6sA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1g6sA/nostruct-align/1g6sA.t2k.a2m.gz, have 689099 columns in 3045 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j79A/nostruct-align/1j79A.t2k.a2m.gz
# 1j79A.t2k.a2m with 156 sequences, total weight= 56.2148 avg weight= 0.360352 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j79A/info/1j79A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1j79A/nostruct-align/1j79A.t2k.a2m.gz, have 689442 columns in 3046 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ykuA/nostruct-align/1ykuA.t2k.a2m.gz
# 1ykuA.t2k.a2m with 14 sequences, total weight= 4.934 avg weight= 0.352428 18 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ykuA/info/1ykuA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1ykuA/nostruct-align/1ykuA.t2k.a2m.gz, have 689574 columns in 3047 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gu7A/nostruct-align/1gu7A.t2k.a2m.gz
# 1gu7A.t2k.a2m with 721 sequences, total weight= 721 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19523 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gu7A/info/1gu7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gu7A/nostruct-align/1gu7A.t2k.a2m.gz, have 689938 columns in 3048 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ryaA/nostruct-align/1ryaA.t2k.a2m.gz
# 1ryaA.t2k.a2m with 794 sequences, total weight= 794 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10821 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ryaA/info/1ryaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1ryaA/nostruct-align/1ryaA.t2k.a2m.gz, have 690098 columns in 3049 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bkb/nostruct-align/1bkb.t2k.a2m.gz
# 1bkb.t2k.a2m with 265 sequences, total weight= 44.1061 avg weight= 0.166438 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bkb/info/1bkb.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1bkb/nostruct-align/1bkb.t2k.a2m.gz, have 690234 columns in 3050 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rkqA/nostruct-align/1rkqA.t2k.a2m.gz
# 1rkqA.t2k.a2m with 802 sequences, total weight= 802 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.986354 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rkqA/info/1rkqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rkqA/nostruct-align/1rkqA.t2k.a2m.gz, have 690505 columns in 3051 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1z6mA/nostruct-align/1z6mA.t2k.a2m.gz
# 1z6mA.t2k.a2m with 186 sequences, total weight= 186 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15698 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1z6mA/info/1z6mA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1z6mA/nostruct-align/1z6mA.t2k.a2m.gz, have 690680 columns in 3052 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k3iA/nostruct-align/1k3iA.t2k.a2m.gz
# 1k3iA.t2k.a2m with 555 sequences, total weight= 555 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11822 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k3iA/info/1k3iA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1k3iA/nostruct-align/1k3iA.t2k.a2m.gz, have 691331 columns in 3053 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qddA/nostruct-align/1qddA.t2k.a2m.gz
# 1qddA.t2k.a2m with 1114 sequences, total weight= 1114 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10031 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qddA/info/1qddA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qddA/nostruct-align/1qddA.t2k.a2m.gz, have 691475 columns in 3054 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h80A/nostruct-align/1h80A.t2k.a2m.gz
# 1h80A.t2k.a2m with 129 sequences, total weight= 124.875 avg weight= 0.968022 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h80A/info/1h80A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h80A/nostruct-align/1h80A.t2k.a2m.gz, have 691908 columns in 3055 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xlqA/nostruct-align/1xlqA.t2k.a2m.gz
# 1xlqA.t2k.a2m with 461 sequences, total weight= 78.7293 avg weight= 0.170779 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30065 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xlqA/info/1xlqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xlqA/nostruct-align/1xlqA.t2k.a2m.gz, have 692014 columns in 3056 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i4jA/nostruct-align/1i4jA.t2k.a2m.gz
# 1i4jA.t2k.a2m with 311 sequences, total weight= 26.0785 avg weight= 0.0838537 41 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i4jA/info/1i4jA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1i4jA/nostruct-align/1i4jA.t2k.a2m.gz, have 692124 columns in 3057 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o5kA/nostruct-align/1o5kA.t2k.a2m.gz
# 1o5kA.t2k.a2m with 435 sequences, total weight= 186.678 avg weight= 0.429144 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30567 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o5kA/info/1o5kA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1o5kA/nostruct-align/1o5kA.t2k.a2m.gz, have 692419 columns in 3058 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jsdA/nostruct-align/1jsdA.t2k.a2m.gz
# 1jsdA.t2k.a2m with 1977 sequences, total weight= 9.2124 avg weight= 0.00465979 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jsdA/info/1jsdA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jsdA/nostruct-align/1jsdA.t2k.a2m.gz, have 692736 columns in 3059 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/6r/6rlxB/nostruct-align/6rlxB.t2k.a2m.gz
# 6rlxB.t2k.a2m with 32 sequences, total weight= 2.71593 avg weight= 0.0848728 16 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/6r/6rlxB/info/6rlxB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/6r/6rlxB/nostruct-align/6rlxB.t2k.a2m.gz, have 692763 columns in 3060 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yumA/nostruct-align/1yumA.t2k.a2m.gz
# 1yumA.t2k.a2m with 594 sequences, total weight= 594 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17975 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yumA/info/1yumA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yumA/nostruct-align/1yumA.t2k.a2m.gz, have 692975 columns in 3061 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2axyA/nostruct-align/2axyA.t2k.a2m.gz
# 2axyA.t2k.a2m with 1368 sequences, total weight= 78.5833 avg weight= 0.0574439 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30492 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2axyA/info/2axyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2axyA/nostruct-align/2axyA.t2k.a2m.gz, have 693047 columns in 3062 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2f8yA/nostruct-align/2f8yA.t2k.a2m.gz
# 2f8yA.t2k.a2m with 10986 sequences, total weight= 10986 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21042 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2f8yA/info/2f8yA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2f8yA/nostruct-align/2f8yA.t2k.a2m.gz, have 693262 columns in 3063 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2ccqA/nostruct-align/2ccqA.t2k.a2m.gz
# 2ccqA.t2k.a2m with 125 sequences, total weight= 67.6224 avg weight= 0.540979 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2ccqA/info/2ccqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2ccqA/nostruct-align/2ccqA.t2k.a2m.gz, have 693361 columns in 3064 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wuiL/nostruct-align/1wuiL.t2k.a2m.gz
# 1wuiL.t2k.a2m with 526 sequences, total weight= 526 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20939 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wuiL/info/1wuiL.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wuiL/nostruct-align/1wuiL.t2k.a2m.gz, have 693895 columns in 3065 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2d8dA/nostruct-align/2d8dA.t2k.a2m.gz
# 2d8dA.t2k.a2m with 439 sequences, total weight= 41.6741 avg weight= 0.0949295 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30088 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2d8dA/info/2d8dA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2d/2d8dA/nostruct-align/2d8dA.t2k.a2m.gz, have 693975 columns in 3066 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t2dA/nostruct-align/1t2dA.t2k.a2m.gz
# 1t2dA.t2k.a2m with 923 sequences, total weight= 75.6937 avg weight= 0.0820083 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30273 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t2dA/info/1t2dA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1t2dA/nostruct-align/1t2dA.t2k.a2m.gz, have 694290 columns in 3067 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cczA/nostruct-align/1cczA.t2k.a2m.gz
# 1cczA.t2k.a2m with 268 sequences, total weight= 268 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23297 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cczA/info/1cczA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1c/1cczA/nostruct-align/1cczA.t2k.a2m.gz, have 694461 columns in 3068 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p0zA/nostruct-align/1p0zA.t2k.a2m.gz
# 1p0zA.t2k.a2m with 60 sequences, total weight= 21.9279 avg weight= 0.365465 35 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p0zA/info/1p0zA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1p0zA/nostruct-align/1p0zA.t2k.a2m.gz, have 694592 columns in 3069 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1urrA/nostruct-align/1urrA.t2k.a2m.gz
# 1urrA.t2k.a2m with 196 sequences, total weight= 40.9126 avg weight= 0.208738 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1urrA/info/1urrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1urrA/nostruct-align/1urrA.t2k.a2m.gz, have 694689 columns in 3070 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y02A/nostruct-align/1y02A.t2k.a2m.gz
# 1y02A.t2k.a2m with 260 sequences, total weight= 39.3498 avg weight= 0.151345 41 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y02A/info/1y02A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1y02A/nostruct-align/1y02A.t2k.a2m.gz, have 694780 columns in 3071 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1guqA/nostruct-align/1guqA.t2k.a2m.gz
# 1guqA.t2k.a2m with 142 sequences, total weight= 37.8569 avg weight= 0.266598 39 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1guqA/info/1guqA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1guqA/nostruct-align/1guqA.t2k.a2m.gz, have 695127 columns in 3072 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dowB/nostruct-align/1dowB.t2k.a2m.gz
# 1dowB.t2k.a2m with 45 sequences, total weight= 2.72609 avg weight= 0.0605798 12 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dowB/info/1dowB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dowB/nostruct-align/1dowB.t2k.a2m.gz, have 695159 columns in 3073 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mjfA/nostruct-align/1mjfA.t2k.a2m.gz
# 1mjfA.t2k.a2m with 285 sequences, total weight= 285 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27645 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mjfA/info/1mjfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mjfA/nostruct-align/1mjfA.t2k.a2m.gz, have 695430 columns in 3074 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lzlA/nostruct-align/1lzlA.t2k.a2m.gz
# 1lzlA.t2k.a2m with 1053 sequences, total weight= 1053 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07947 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lzlA/info/1lzlA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lzlA/nostruct-align/1lzlA.t2k.a2m.gz, have 695747 columns in 3075 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dxeA/nostruct-align/1dxeA.t2k.a2m.gz
# 1dxeA.t2k.a2m with 284 sequences, total weight= 111.06 avg weight= 0.391056 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30058 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dxeA/info/1dxeA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dxeA/nostruct-align/1dxeA.t2k.a2m.gz, have 696000 columns in 3076 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vcaA/nostruct-align/1vcaA.t2k.a2m.gz
# 1vcaA.t2k.a2m with 2688 sequences, total weight= 2688 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03266 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vcaA/info/1vcaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vcaA/nostruct-align/1vcaA.t2k.a2m.gz, have 696199 columns in 3077 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sqeA/nostruct-align/1sqeA.t2k.a2m.gz
# 1sqeA.t2k.a2m with 67 sequences, total weight= 33.4383 avg weight= 0.499079 39 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sqeA/info/1sqeA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1sqeA/nostruct-align/1sqeA.t2k.a2m.gz, have 696300 columns in 3078 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nvgA/nostruct-align/2nvgA.t2k.a2m.gz
# 2nvgA.t2k.a2m with 1205 sequences, total weight= 626.182 avg weight= 0.519653 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31075 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nvgA/info/2nvgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2n/2nvgA/nostruct-align/2nvgA.t2k.a2m.gz, have 696441 columns in 3079 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xkrA/nostruct-align/1xkrA.t2k.a2m.gz
# 1xkrA.t2k.a2m with 117 sequences, total weight= 117 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24408 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xkrA/info/1xkrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xkrA/nostruct-align/1xkrA.t2k.a2m.gz, have 696646 columns in 3080 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n13A/nostruct-align/1n13A.t2k.a2m.gz
# 1n13A.t2k.a2m with 22 sequences, total weight= 3.70923 avg weight= 0.168601 15 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n13A/info/1n13A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1n13A/nostruct-align/1n13A.t2k.a2m.gz, have 696692 columns in 3081 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jb3A/nostruct-align/1jb3A.t2k.a2m.gz
# 1jb3A.t2k.a2m with 15 sequences, total weight= 2.37704 avg weight= 0.158469 8 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jb3A/info/1jb3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jb3A/nostruct-align/1jb3A.t2k.a2m.gz, have 696819 columns in 3082 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uasA/nostruct-align/1uasA.t2k.a2m.gz
# 1uasA.t2k.a2m with 147 sequences, total weight= 138.143 avg weight= 0.93975 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uasA/info/1uasA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uasA/nostruct-align/1uasA.t2k.a2m.gz, have 697181 columns in 3083 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hyvA/nostruct-align/1hyvA.t2k.a2m.gz
# 1hyvA.t2k.a2m with 1713 sequences, total weight= 252.453 avg weight= 0.147375 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32011 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hyvA/info/1hyvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hyvA/nostruct-align/1hyvA.t2k.a2m.gz, have 697325 columns in 3084 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cviA/nostruct-align/2cviA.t2k.a2m.gz
# 2cviA.t2k.a2m with 968 sequences, total weight= 265.926 avg weight= 0.274717 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31295 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cviA/info/2cviA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cviA/nostruct-align/2cviA.t2k.a2m.gz, have 697408 columns in 3085 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nr7A/nostruct-align/2nr7A.t2k.a2m.gz
# 2nr7A.t2k.a2m with 86 sequences, total weight= 39.9088 avg weight= 0.464055 41 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nr7A/info/2nr7A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2n/2nr7A/nostruct-align/2nr7A.t2k.a2m.gz, have 697602 columns in 3086 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fr1A/nostruct-align/2fr1A.t2k.a2m.gz
# 2fr1A.t2k.a2m with 1649 sequences, total weight= 1649 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18533 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fr1A/info/2fr1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fr1A/nostruct-align/2fr1A.t2k.a2m.gz, have 698058 columns in 3087 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xkpB/nostruct-align/1xkpB.t2k.a2m.gz
# 1xkpB.t2k.a2m with 18 sequences, total weight= 4.97775 avg weight= 0.276542 17 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xkpB/info/1xkpB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xkpB/nostruct-align/1xkpB.t2k.a2m.gz, have 698179 columns in 3088 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nkpA/nostruct-align/1nkpA.t2k.a2m.gz
# 1nkpA.t2k.a2m with 1222 sequences, total weight= 136.861 avg weight= 0.111997 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30417 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nkpA/info/1nkpA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nkpA/nostruct-align/1nkpA.t2k.a2m.gz, have 698267 columns in 3089 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e1hB/nostruct-align/1e1hB.t2k.a2m.gz
# 1e1hB.t2k.a2m with 47 sequences, total weight= 6.1397 avg weight= 0.130632 23 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e1hB/info/1e1hB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1e1hB/nostruct-align/1e1hB.t2k.a2m.gz, have 698431 columns in 3090 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2ga8A/nostruct-align/2ga8A.t2k.a2m.gz
# 2ga8A.t2k.a2m with 591 sequences, total weight= 591 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1267 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2ga8A/info/2ga8A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2ga8A/nostruct-align/2ga8A.t2k.a2m.gz, have 698760 columns in 3091 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o6sB/nostruct-align/1o6sB.t2k.a2m.gz
# 1o6sB.t2k.a2m with 2305 sequences, total weight= 2305 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21298 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o6sB/info/1o6sB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1o6sB/nostruct-align/1o6sB.t2k.a2m.gz, have 698864 columns in 3092 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g8kA/nostruct-align/1g8kA.t2k.a2m.gz
# 1g8kA.t2k.a2m with 309 sequences, total weight= 309 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26383 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g8kA/info/1g8kA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1g8kA/nostruct-align/1g8kA.t2k.a2m.gz, have 699686 columns in 3093 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ysrA/nostruct-align/1ysrA.t2k.a2m.gz
# 1ysrA.t2k.a2m with 7652 sequences, total weight= 4502.69 avg weight= 0.588433 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3171 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ysrA/info/1ysrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1ysrA/nostruct-align/1ysrA.t2k.a2m.gz, have 699823 columns in 3094 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2j8mA/nostruct-align/2j8mA.t2k.a2m.gz
# 2j8mA.t2k.a2m with 4486 sequences, total weight= 4486 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.934592 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2j8mA/info/2j8mA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2j8mA/nostruct-align/2j8mA.t2k.a2m.gz, have 699994 columns in 3095 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tuaA/nostruct-align/1tuaA.t2k.a2m.gz
# 1tuaA.t2k.a2m with 289 sequences, total weight= 192.826 avg weight= 0.667218 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30063 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tuaA/info/1tuaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tuaA/nostruct-align/1tuaA.t2k.a2m.gz, have 700183 columns in 3096 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nf9A/nostruct-align/1nf9A.t2k.a2m.gz
# 1nf9A.t2k.a2m with 282 sequences, total weight= 272.995 avg weight= 0.968068 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nf9A/info/1nf9A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nf9A/nostruct-align/1nf9A.t2k.a2m.gz, have 700390 columns in 3097 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bgf/nostruct-align/1bgf.t2k.a2m.gz
# 1bgf.t2k.a2m with 107 sequences, total weight= 10.2292 avg weight= 0.0956002 29 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bgf/info/1bgf.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1b/1bgf/nostruct-align/1bgf.t2k.a2m.gz, have 700514 columns in 3098 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2b3gA/nostruct-align/2b3gA.t2k.a2m.gz
# 2b3gA.t2k.a2m with 50 sequences, total weight= 16.3305 avg weight= 0.326609 32 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2b3gA/info/2b3gA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2b3gA/nostruct-align/2b3gA.t2k.a2m.gz, have 700631 columns in 3099 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ugiA/nostruct-align/1ugiA.t2k.a2m.gz
# 1ugiA.t2k.a2m with 4 sequences, total weight= 1.90323 avg weight= 0.475807 7 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ugiA/info/1ugiA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1u/1ugiA/nostruct-align/1ugiA.t2k.a2m.gz, have 700714 columns in 3100 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mwvA/nostruct-align/1mwvA.t2k.a2m.gz
# 1mwvA.t2k.a2m with 436 sequences, total weight= 13.9704 avg weight= 0.0320423 29 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mwvA/info/1mwvA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mwvA/nostruct-align/1mwvA.t2k.a2m.gz, have 701428 columns in 3101 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eu1A/nostruct-align/1eu1A.t2k.a2m.gz
# 1eu1A.t2k.a2m with 362 sequences, total weight= 362 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22435 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eu1A/info/1eu1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1e/1eu1A/nostruct-align/1eu1A.t2k.a2m.gz, have 702195 columns in 3102 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y0uA/nostruct-align/1y0uA.t2k.a2m.gz
# 1y0uA.t2k.a2m with 246 sequences, total weight= 61.0197 avg weight= 0.248047 45 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y0uA/info/1y0uA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1y0uA/nostruct-align/1y0uA.t2k.a2m.gz, have 702284 columns in 3103 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y5hA/nostruct-align/1y5hA.t2k.a2m.gz
# 1y5hA.t2k.a2m with 2123 sequences, total weight= 2123 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23665 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y5hA/info/1y5hA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1y5hA/nostruct-align/1y5hA.t2k.a2m.gz, have 702407 columns in 3104 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2icuA/nostruct-align/2icuA.t2k.a2m.gz
# 2icuA.t2k.a2m with 347 sequences, total weight= 144.711 avg weight= 0.417035 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30364 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2icuA/info/2icuA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2icuA/nostruct-align/2icuA.t2k.a2m.gz, have 702617 columns in 3105 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y66A/nostruct-align/1y66A.t2k.a2m.gz
# 1y66A.t2k.a2m with 3 sequences, total weight= 2.15995 avg weight= 0.719982 6 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y66A/info/1y66A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1y66A/nostruct-align/1y66A.t2k.a2m.gz, have 702667 columns in 3106 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wdpA/nostruct-align/1wdpA.t2k.a2m.gz
# 1wdpA.t2k.a2m with 164 sequences, total weight= 11.0801 avg weight= 0.0675615 29 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wdpA/info/1wdpA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wdpA/nostruct-align/1wdpA.t2k.a2m.gz, have 703160 columns in 3107 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bkaA/nostruct-align/2bkaA.t2k.a2m.gz
# 2bkaA.t2k.a2m with 453 sequences, total weight= 453 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07488 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bkaA/info/2bkaA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bkaA/nostruct-align/2bkaA.t2k.a2m.gz, have 703391 columns in 3108 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hfeL/nostruct-align/1hfeL.t2k.a2m.gz
# 1hfeL.t2k.a2m with 834 sequences, total weight= 834 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14768 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hfeL/info/1hfeL.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hfeL/nostruct-align/1hfeL.t2k.a2m.gz, have 703787 columns in 3109 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fa1A/nostruct-align/2fa1A.t2k.a2m.gz
# 2fa1A.t2k.a2m with 366 sequences, total weight= 366 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23731 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fa1A/info/2fa1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fa1A/nostruct-align/2fa1A.t2k.a2m.gz, have 703946 columns in 3110 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i60A/nostruct-align/1i60A.t2k.a2m.gz
# 1i60A.t2k.a2m with 284 sequences, total weight= 284 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.989929 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i60A/info/1i60A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1i60A/nostruct-align/1i60A.t2k.a2m.gz, have 704224 columns in 3111 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1szhA/nostruct-align/1szhA.t2k.a2m.gz
# 1szhA.t2k.a2m with 8 sequences, total weight= 3.48477 avg weight= 0.435596 14 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1szhA/info/1szhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1szhA/nostruct-align/1szhA.t2k.a2m.gz, have 704371 columns in 3112 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gj3A/nostruct-align/2gj3A.t2k.a2m.gz
# 2gj3A.t2k.a2m with 6288 sequences, total weight= 6288 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.978442 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gj3A/info/2gj3A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gj3A/nostruct-align/2gj3A.t2k.a2m.gz, have 704490 columns in 3113 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2apr/nostruct-align/2apr.t2k.a2m.gz
# 2apr.t2k.a2m with 472 sequences, total weight= 102.323 avg weight= 0.216787 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30475 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2apr/info/2apr.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2a/2apr/nostruct-align/2apr.t2k.a2m.gz, have 704815 columns in 3114 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kkoA/nostruct-align/1kkoA.t2k.a2m.gz
# 1kkoA.t2k.a2m with 110 sequences, total weight= 47.9217 avg weight= 0.435652 41 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kkoA/info/1kkoA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kkoA/nostruct-align/1kkoA.t2k.a2m.gz, have 705226 columns in 3115 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2obwA/nostruct-align/2obwA.t2k.a2m.gz
# 2obwA.t2k.a2m with 3258 sequences, total weight= 3258 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00162 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2obwA/info/2obwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2obwA/nostruct-align/2obwA.t2k.a2m.gz, have 705478 columns in 3116 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pcfA/nostruct-align/1pcfA.t2k.a2m.gz
# 1pcfA.t2k.a2m with 30 sequences, total weight= 8.50324 avg weight= 0.283441 23 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pcfA/info/1pcfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pcfA/nostruct-align/1pcfA.t2k.a2m.gz, have 705544 columns in 3117 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2e/2eutA/nostruct-align/2eutA.t2k.a2m.gz
# 2eutA.t2k.a2m with 1678 sequences, total weight= 134.966 avg weight= 0.0804327 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3098 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2e/2eutA/info/2eutA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2e/2eutA/nostruct-align/2eutA.t2k.a2m.gz, have 705835 columns in 3118 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2ihdA/nostruct-align/2ihdA.t2k.a2m.gz
# 2ihdA.t2k.a2m with 845 sequences, total weight= 159.834 avg weight= 0.189152 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30932 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2ihdA/info/2ihdA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2i/2ihdA/nostruct-align/2ihdA.t2k.a2m.gz, have 705962 columns in 3119 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2j/2jg0A/nostruct-align/2jg0A.t2k.a2m.gz
# 2jg0A.t2k.a2m with 313 sequences, total weight= 313 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2427 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2j/2jg0A/info/2jg0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2j/2jg0A/nostruct-align/2jg0A.t2k.a2m.gz, have 706469 columns in 3120 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sqgA/nostruct-align/1sqgA.t2k.a2m.gz
# 1sqgA.t2k.a2m with 735 sequences, total weight= 735 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15124 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sqgA/info/1sqgA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1sqgA/nostruct-align/1sqgA.t2k.a2m.gz, have 706893 columns in 3121 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bbrA/nostruct-align/2bbrA.t2k.a2m.gz
# 2bbrA.t2k.a2m with 101 sequences, total weight= 21.7931 avg weight= 0.215773 35 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bbrA/info/2bbrA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bbrA/nostruct-align/2bbrA.t2k.a2m.gz, have 707082 columns in 3122 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w79A/nostruct-align/1w79A.t2k.a2m.gz
# 1w79A.t2k.a2m with 192 sequences, total weight= 192 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2156 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w79A/info/1w79A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w79A/nostruct-align/1w79A.t2k.a2m.gz, have 707548 columns in 3123 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3e/3eipA/nostruct-align/3eipA.t2k.a2m.gz
# 3eipA.t2k.a2m with 11 sequences, total weight= 2.63753 avg weight= 0.239775 12 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3e/3eipA/info/3eipA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/3e/3eipA/nostruct-align/3eipA.t2k.a2m.gz, have 707632 columns in 3124 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2o/2o8lA/nostruct-align/2o8lA.t2k.a2m.gz
# 2o8lA.t2k.a2m with 1547 sequences, total weight= 1547 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10176 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2o/2o8lA/info/2o8lA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2o/2o8lA/nostruct-align/2o8lA.t2k.a2m.gz, have 707848 columns in 3125 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w1hA/nostruct-align/1w1hA.t2k.a2m.gz
# 1w1hA.t2k.a2m with 34 sequences, total weight= 7.03671 avg weight= 0.206962 22 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w1hA/info/1w1hA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w1hA/nostruct-align/1w1hA.t2k.a2m.gz, have 707995 columns in 3126 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ihjA/nostruct-align/1ihjA.t2k.a2m.gz
# 1ihjA.t2k.a2m with 1202 sequences, total weight= 163.26 avg weight= 0.135824 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30745 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ihjA/info/1ihjA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1i/1ihjA/nostruct-align/1ihjA.t2k.a2m.gz, have 708089 columns in 3127 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gecA/nostruct-align/2gecA.t2k.a2m.gz
# 2gecA.t2k.a2m with 270 sequences, total weight= 7.22853 avg weight= 0.0267723 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gecA/info/2gecA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2g/2gecA/nostruct-align/2gecA.t2k.a2m.gz, have 708227 columns in 3128 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y0bA/nostruct-align/1y0bA.t2k.a2m.gz
# 1y0bA.t2k.a2m with 758 sequences, total weight= 206.81 avg weight= 0.272836 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30535 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y0bA/info/1y0bA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1y0bA/nostruct-align/1y0bA.t2k.a2m.gz, have 708420 columns in 3129 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zarA/nostruct-align/1zarA.t2k.a2m.gz
# 1zarA.t2k.a2m with 1597 sequences, total weight= 1597 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01542 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zarA/info/1zarA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zarA/nostruct-align/1zarA.t2k.a2m.gz, have 708687 columns in 3130 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g3p/nostruct-align/1g3p.t2k.a2m.gz
# 1g3p.t2k.a2m with 95 sequences, total weight= 10.6056 avg weight= 0.111638 18 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g3p/info/1g3p.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1g/1g3p/nostruct-align/1g3p.t2k.a2m.gz, have 708879 columns in 3131 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vdwA/nostruct-align/1vdwA.t2k.a2m.gz
# 1vdwA.t2k.a2m with 1850 sequences, total weight= 1850 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26092 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vdwA/info/1vdwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vdwA/nostruct-align/1vdwA.t2k.a2m.gz, have 709127 columns in 3132 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zdyA/nostruct-align/1zdyA.t2k.a2m.gz
# 1zdyA.t2k.a2m with 14 sequences, total weight= 10.9496 avg weight= 0.782117 19 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zdyA/info/1zdyA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1z/1zdyA/nostruct-align/1zdyA.t2k.a2m.gz, have 709428 columns in 3133 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x1zA/nostruct-align/1x1zA.t2k.a2m.gz
# 1x1zA.t2k.a2m with 579 sequences, total weight= 579 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29556 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x1zA/info/1x1zA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1x/1x1zA/nostruct-align/1x1zA.t2k.a2m.gz, have 709643 columns in 3134 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2h6fB/nostruct-align/2h6fB.t2k.a2m.gz
# 2h6fB.t2k.a2m with 322 sequences, total weight= 302.94 avg weight= 0.940809 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2h6fB/info/2h6fB.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2h6fB/nostruct-align/2h6fB.t2k.a2m.gz, have 710053 columns in 3135 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1ju2A/nostruct-align/1ju2A.t2k.a2m.gz
# 1ju2A.t2k.a2m with 385 sequences, total weight= 385 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0682 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1ju2A/info/1ju2A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1j/1ju2A/nostruct-align/1ju2A.t2k.a2m.gz, have 710574 columns in 3136 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1orc/nostruct-align/1orc.t2k.a2m.gz
# 1orc.t2k.a2m with 13 sequences, total weight= 3.09866 avg weight= 0.238359 12 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1orc/info/1orc.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1orc/nostruct-align/1orc.t2k.a2m.gz, have 710638 columns in 3137 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nuhA/nostruct-align/2nuhA.t2k.a2m.gz
# 2nuhA.t2k.a2m with 317 sequences, total weight= 24.3324 avg weight= 0.0767584 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nuhA/info/2nuhA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2n/2nuhA/nostruct-align/2nuhA.t2k.a2m.gz, have 710742 columns in 3138 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mhnA/nostruct-align/1mhnA.t2k.a2m.gz
# 1mhnA.t2k.a2m with 102 sequences, total weight= 31.7669 avg weight= 0.31144 41 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mhnA/info/1mhnA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mhnA/nostruct-align/1mhnA.t2k.a2m.gz, have 710801 columns in 3139 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v7zA/nostruct-align/1v7zA.t2k.a2m.gz
# 1v7zA.t2k.a2m with 67 sequences, total weight= 56.2447 avg weight= 0.839473 45 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v7zA/info/1v7zA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v7zA/nostruct-align/1v7zA.t2k.a2m.gz, have 711058 columns in 3140 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ok0A/nostruct-align/1ok0A.t2k.a2m.gz
# 1ok0A.t2k.a2m with 14 sequences, total weight= 4.08761 avg weight= 0.291972 17 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ok0A/info/1ok0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1o/1ok0A/nostruct-align/1ok0A.t2k.a2m.gz, have 711132 columns in 3141 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v37A/nostruct-align/1v37A.t2k.a2m.gz
# 1v37A.t2k.a2m with 975 sequences, total weight= 550.718 avg weight= 0.564839 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30956 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v37A/info/1v37A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v37A/nostruct-align/1v37A.t2k.a2m.gz, have 711303 columns in 3142 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kb0A/nostruct-align/1kb0A.t2k.a2m.gz
# 1kb0A.t2k.a2m with 446 sequences, total weight= 446 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1585 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kb0A/info/1kb0A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kb0A/nostruct-align/1kb0A.t2k.a2m.gz, have 711973 columns in 3143 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f94A/nostruct-align/1f94A.t2k.a2m.gz
# 1f94A.t2k.a2m with 5 sequences, total weight= 3.41493 avg weight= 0.682985 14 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f94A/info/1f94A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1f94A/nostruct-align/1f94A.t2k.a2m.gz, have 712036 columns in 3144 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2e/2e7zA/nostruct-align/2e7zA.t2k.a2m.gz
# 2e7zA.t2k.a2m with 3075 sequences, total weight= 3075 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09885 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2e/2e7zA/info/2e7zA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2e/2e7zA/nostruct-align/2e7zA.t2k.a2m.gz, have 712763 columns in 3145 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rw1A/nostruct-align/1rw1A.t2k.a2m.gz
# 1rw1A.t2k.a2m with 263 sequences, total weight= 37.509 avg weight= 0.14262 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rw1A/info/1rw1A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rw1A/nostruct-align/1rw1A.t2k.a2m.gz, have 712877 columns in 3146 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cz1B/nostruct-align/2cz1B.t2k.a2m.gz
# 2cz1B.t2k.a2m with 61 sequences, total weight= 14.3986 avg weight= 0.236042 29 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cz1B/info/2cz1B.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2cz1B/nostruct-align/2cz1B.t2k.a2m.gz, have 713088 columns in 3147 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fcwA/nostruct-align/2fcwA.t2k.a2m.gz
# 2fcwA.t2k.a2m with 76 sequences, total weight= 15.9923 avg weight= 0.210424 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fcwA/info/2fcwA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fcwA/nostruct-align/2fcwA.t2k.a2m.gz, have 713194 columns in 3148 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sfxA/nostruct-align/1sfxA.t2k.a2m.gz
# 1sfxA.t2k.a2m with 250 sequences, total weight= 250 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10974 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sfxA/info/1sfxA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1s/1sfxA/nostruct-align/1sfxA.t2k.a2m.gz, have 713303 columns in 3149 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y4wA/nostruct-align/1y4wA.t2k.a2m.gz
# 1y4wA.t2k.a2m with 457 sequences, total weight= 190.156 avg weight= 0.416096 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30498 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y4wA/info/1y4wA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1y/1y4wA/nostruct-align/1y4wA.t2k.a2m.gz, have 713820 columns in 3150 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rhcA/nostruct-align/1rhcA.t2k.a2m.gz
# 1rhcA.t2k.a2m with 1193 sequences, total weight= 1193 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03981 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rhcA/info/1rhcA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rhcA/nostruct-align/1rhcA.t2k.a2m.gz, have 714150 columns in 3151 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2c61A/nostruct-align/2c61A.t2k.a2m.gz
# 2c61A.t2k.a2m with 6696 sequences, total weight= 49.8566 avg weight= 0.00744573 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30197 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2c61A/info/2c61A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2c61A/nostruct-align/2c61A.t2k.a2m.gz, have 714581 columns in 3152 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f32A/nostruct-align/1f32A.t2k.a2m.gz
# 1f32A.t2k.a2m with 17 sequences, total weight= 6.81942 avg weight= 0.401142 17 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f32A/info/1f32A.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1f/1f32A/nostruct-align/1f32A.t2k.a2m.gz, have 714708 columns in 3153 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2c7pA/nostruct-align/2c7pA.t2k.a2m.gz
# 2c7pA.t2k.a2m with 778 sequences, total weight= 778 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07546 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2c7pA/info/2c7pA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2c/2c7pA/nostruct-align/2c7pA.t2k.a2m.gz, have 715035 columns in 3154 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wtjA/nostruct-align/1wtjA.t2k.a2m.gz
# 1wtjA.t2k.a2m with 210 sequences, total weight= 45.53 avg weight= 0.21681 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3003 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wtjA/info/1wtjA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wtjA/nostruct-align/1wtjA.t2k.a2m.gz, have 715367 columns in 3155 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hcfA/nostruct-align/2hcfA.t2k.a2m.gz
# 2hcfA.t2k.a2m with 1026 sequences, total weight= 1026 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0927 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hcfA/info/2hcfA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hcfA/nostruct-align/2hcfA.t2k.a2m.gz, have 715592 columns in 3156 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d5tA/nostruct-align/1d5tA.t2k.a2m.gz
# 1d5tA.t2k.a2m with 269 sequences, total weight= 269 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0347 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d5tA/info/1d5tA.stride-mixed.strand_sep
# After reading /projects/compbio/experiments/models.97/pdb/1d/1d5tA/nostruct-align/1d5tA.t2k.a2m.gz, have 716025 columns in 3157 chains
# command:CPU_time= 3352.52 sec, elapsed time= 4248.21 sec)
# command:# ReportNetQualityForCrossTrainTo quality-reports/dunbrack-40pc-3157-t2k-IDGaaH13-3-13-7-13-9-13-11-strand_sep-seeded.train ok.
# command:WARNING: BackgroundProbs for strand_sep not read in before initializing network.
Setting BackgroundProbs for strand_sep based on training set
# Network initialization done
# command:Equilibrating dunbrack-40pc-3157-t2k-IDGaaH13-3-13-7-13-9-13-11-strand_sep-seeded.net
# command:# Training Net with 50 estimation cycles.
Epoch: 1  2.62886 cross_bits=2.62374 objective=1.78726 new best
Epoch: 2  2.62378 cross_bits=2.6202 objective=1.79183 new best
Epoch: 3  2.62078 cross_bits=2.61761 objective=1.79536 new best
Epoch: 4  2.61844 cross_bits=2.6155 objective=1.79826 new best
Epoch: 5  2.61647 cross_bits=2.61367 objective=1.80063 new best
Epoch: 6  2.61474 cross_bits=2.61205 objective=1.80252 new best
Epoch: 7  2.61319 cross_bits=2.61058 objective=1.8044 new best
Epoch: 8  2.61177 cross_bits=2.60923 objective=1.80611 new best
Epoch: 9  2.61045 cross_bits=2.60797 objective=1.80784 new best
Epoch: 10  2.60922 cross_bits=2.60678 objective=1.8092 new best
Epoch: 11  2.60806 cross_bits=2.60566 objective=1.81068 new best
Epoch: 12  2.60695 cross_bits=2.60459 objective=1.81209 new best
Epoch: 13  2.6059 cross_bits=2.60357 objective=1.81331 new best
Epoch: 14  2.60489 cross_bits=2.60259 objective=1.81456 new best, reshuffling
Epoch: 15  2.60412 cross_bits=2.60132 objective=1.81601 new best
Epoch: 16  2.60318 cross_bits=2.60042 objective=1.81723 new best, reshuffling
Epoch: 17  2.60232 cross_bits=2.59999 objective=1.81831 new best, reshuffling
Epoch: 18  2.60145 cross_bits=2.59897 objective=1.81898 new best
Epoch: 19  2.6006 cross_bits=2.59816 objective=1.82008 new best
Epoch: 20  2.59977 cross_bits=2.59736 objective=1.82107 new best
Epoch: 21  2.59897 cross_bits=2.59659 objective=1.822 new best
Epoch: 22  2.59818 cross_bits=2.59583 objective=1.82297 new best
Epoch: 23  2.59741 cross_bits=2.59509 objective=1.82384 new best
Epoch: 24  2.59666 cross_bits=2.59436 objective=1.82481 new best
Epoch: 25  2.59592 cross_bits=2.59366 objective=1.82567 new best
Epoch: 26  2.59521 cross_bits=2.59296 objective=1.82652 new best
Epoch: 27  2.5945 cross_bits=2.59229 objective=1.82734 new best
Epoch: 28  2.59382 cross_bits=2.59162 objective=1.82828 new best, reshuffling
Epoch: 29  2.59304 cross_bits=2.59053 objective=1.83005 new best
Epoch: 30  2.59239 cross_bits=2.58989 objective=1.8308 new best
Epoch: 31  2.59175 cross_bits=2.58927 objective=1.83162 new best
Epoch: 32  2.59111 cross_bits=2.58866 objective=1.83251 new best
Epoch: 33  2.59049 cross_bits=2.58805 objective=1.83328 new best
Epoch: 34  2.58988 cross_bits=2.58746 objective=1.83405 new best
Epoch: 35  2.58928 cross_bits=2.58688 objective=1.83473 new best
Epoch: 36  2.58869 cross_bits=2.58631 objective=1.83545 new best
Epoch: 37  2.58811 cross_bits=2.58575 objective=1.83623 new best
Epoch: 38  2.58754 cross_bits=2.5852 objective=1.83698 new best, reshuffling
Epoch: 39  2.58679 cross_bits=2.58588 objective=1.83568 worse network accepted, reshuffling
Epoch: 40  2.58659 cross_bits=2.5841 objective=1.83864 new best
Epoch: 41  2.58603 cross_bits=2.58359 objective=1.83928 new best
Epoch: 42  2.5855 cross_bits=2.58307 objective=1.83997 new best, reshuffling
Epoch: 43  2.58492 cross_bits=2.58292 objective=1.83995 worse network accepted, reshuffling
Epoch: 44  2.58437 cross_bits=2.58309 objective=1.83953 worse network accepted, reshuffling
Epoch: 45  2.58376 cross_bits=2.58211 objective=1.84135 new best
Epoch: 46  2.58328 cross_bits=2.58163 objective=1.84197 new best
Epoch: 47  2.5828 cross_bits=2.58116 objective=1.84264 new best, reshuffling
Epoch: 48  2.58224 cross_bits=2.58147 objective=1.84262 worse network accepted, reshuffling
Epoch: 49  2.58178 cross_bits=2.58204 objective=1.84112 worse network accepted, reshuffling
Epoch: 50  2.58144 cross_bits=2.58022 objective=1.84352 new best
# Network initialization done
# command:# ReportNeuralNet networks/dunbrack-40pc-3157-t2k-IDGaaH13-3-13-7-13-9-13-11-strand_sep-seeded.net ok.
# Network initialization done
# Neural network printed.
# command:CPU_time= 21775.1 sec, elapsed time= 24608.5 sec)
# command:# Training Net with 50 estimation cycles.
Epoch: 51  2.58097 cross_bits=2.58163 objective=1.84216 worse network accepted, reshuffling
Epoch: 52  2.58019 cross_bits=2.57898 objective=1.84499 new best
Epoch: 53  2.57978 cross_bits=2.57856 objective=1.84557 new best
Epoch: 54  2.57934 cross_bits=2.57814 objective=1.84607 new best
Epoch: 55  2.57891 cross_bits=2.57772 objective=1.84661 new best, reshuffling
Epoch: 56  2.57879 cross_bits=2.57692 objective=1.84777 new best, reshuffling
Epoch: 57  2.57808 cross_bits=2.57624 objective=1.84849 new best
Epoch: 58  2.57766 cross_bits=2.57585 objective=1.84907 new best
Epoch: 59  2.57725 cross_bits=2.57546 objective=1.84952 new best, reshuffling
Epoch: 60  2.57705 cross_bits=2.57533 objective=1.85016 new best
Epoch: 61  2.57668 cross_bits=2.57495 objective=1.85071 new best
Epoch: 62  2.57629 cross_bits=2.57458 objective=1.85124 new best
Epoch: 63  2.57591 cross_bits=2.57421 objective=1.85178 new best
Epoch: 64  2.57553 cross_bits=2.57384 objective=1.85226 new best
Epoch: 65  2.57515 cross_bits=2.57348 objective=1.85271 new best
Epoch: 66  2.57478 cross_bits=2.57312 objective=1.85316 new best
Epoch: 67  2.57442 cross_bits=2.57277 objective=1.85355 new best
Epoch: 68  2.57406 cross_bits=2.57242 objective=1.85402 new best
Epoch: 69  2.57371 cross_bits=2.57208 objective=1.85442 new best
Epoch: 70  2.57336 cross_bits=2.57174 objective=1.85483 new best
Epoch: 71  2.57301 cross_bits=2.57141 objective=1.85528 new best
Epoch: 72  2.57267 cross_bits=2.57108 objective=1.85567 new best
Epoch: 73  2.57234 cross_bits=2.57075 objective=1.85613 new best
Epoch: 74  2.57201 cross_bits=2.57043 objective=1.85654 new best, reshuffling
Epoch: 75  2.57155 cross_bits=2.57034 objective=1.85667 new best
Epoch: 76  2.57126 cross_bits=2.57003 objective=1.85706 new best
Epoch: 77  2.57095 cross_bits=2.56973 objective=1.85746 new best
Epoch: 78  2.57064 cross_bits=2.56942 objective=1.85781 new best
Epoch: 79  2.57033 cross_bits=2.56912 objective=1.85822 new best, reshuffling
Epoch: 80  2.57007 cross_bits=2.56922 objective=1.85812 worse network accepted, reshuffling
Epoch: 81  2.56983 cross_bits=2.56823 objective=1.85965 new best
Epoch: 82  2.56955 cross_bits=2.56796 objective=1.85997 new best
Epoch: 83  2.56926 cross_bits=2.56768 objective=1.86031 new best
Epoch: 84  2.56898 cross_bits=2.56741 objective=1.86061 new best
Epoch: 85  2.56869 cross_bits=2.56714 objective=1.86088 new best
Epoch: 86  2.56841 cross_bits=2.56687 objective=1.86125 new best
Epoch: 87  2.56813 cross_bits=2.56661 objective=1.86156 new best
Epoch: 88  2.56786 cross_bits=2.56635 objective=1.86192 new best
Epoch: 89  2.56759 cross_bits=2.56609 objective=1.86228 new best
Epoch: 90  2.56733 cross_bits=2.56584 objective=1.86262 new best
Epoch: 91  2.56706 cross_bits=2.56559 objective=1.86295 new best
Epoch: 92  2.5668 cross_bits=2.56534 objective=1.86321 new best
Epoch: 93  2.56655 cross_bits=2.5651 objective=1.86356 new best
Epoch: 94  2.5663 cross_bits=2.56486 objective=1.86388 new best
Epoch: 95  2.56605 cross_bits=2.56463 objective=1.86418 new best
Epoch: 96  2.5658 cross_bits=2.5644 objective=1.86452 new best
Epoch: 97  2.56556 cross_bits=2.56417 objective=1.86481 new best
Epoch: 98  2.56532 cross_bits=2.56394 objective=1.86507 new best
Epoch: 99  2.56509 cross_bits=2.56372 objective=1.86536 new best
Epoch: 100  2.56486 cross_bits=2.5635 objective=1.86557 new best
# Network initialization done
# command:# ReportNeuralNet networks/dunbrack-40pc-3157-t2k-IDGaaH13-3-13-7-13-9-13-11-strand_sep-seeded.net ok.
# Network initialization done
# Neural network printed.
# command:CPU_time= 39998.3 sec, elapsed time= 49741.5 sec)
# command:# Training Net with 50 estimation cycles.
Epoch: 101  2.5646 cross_bits=2.56547 objective=1.86373 worse network accepted, reshuffling
Epoch: 102  2.56431 cross_bits=2.56299 objective=1.86654 new best
Epoch: 103  2.56407 cross_bits=2.56279 objective=1.86674 new best
Epoch: 104  2.56386 cross_bits=2.56258 objective=1.86704 new best
Epoch: 105  2.56365 cross_bits=2.56237 objective=1.86733 new best
Epoch: 106  2.56344 cross_bits=2.56217 objective=1.86761 new best
Epoch: 107  2.56323 cross_bits=2.56197 objective=1.86792 new best
Epoch: 108  2.56302 cross_bits=2.56177 objective=1.86821 new best
Epoch: 109  2.56282 cross_bits=2.56157 objective=1.86849 new best
Epoch: 110  2.56261 cross_bits=2.56138 objective=1.8687 new best, reshuffling
Epoch: 111  2.56258 cross_bits=2.56135 objective=1.86903 new best
Epoch: 112  2.56237 cross_bits=2.56116 objective=1.86926 new best
Epoch: 113  2.56218 cross_bits=2.56098 objective=1.86953 new best
Epoch: 114  2.56199 cross_bits=2.56079 objective=1.86976 new best
Epoch: 115  2.5618 cross_bits=2.56061 objective=1.86997 new best
Epoch: 116  2.56161 cross_bits=2.56043 objective=1.87018 new best
Epoch: 117  2.56142 cross_bits=2.56026 objective=1.87037 new best, reshuffling
Epoch: 118  2.561 cross_bits=2.55975 objective=1.87036 worse network accepted, reshuffling
Epoch: 119  2.56076 cross_bits=2.55966 objective=1.87059 new best
Epoch: 120  2.56064 cross_bits=2.5595 objective=1.87082 new best
Epoch: 121  2.56047 cross_bits=2.55934 objective=1.87104 new best
Epoch: 122  2.5603 cross_bits=2.55918 objective=1.87126 new best, reshuffling
Epoch: 123  2.56014 cross_bits=2.55977 objective=1.8705 worse network accepted, reshuffling
Epoch: 124  2.56015 cross_bits=2.55922 objective=1.87181 new best
Epoch: 125  2.55997 cross_bits=2.55907 objective=1.87208 new best
Epoch: 126  2.55981 cross_bits=2.55892 objective=1.87233 new best
Epoch: 127  2.55965 cross_bits=2.55877 objective=1.87243 new best
Epoch: 128  2.55949 cross_bits=2.55861 objective=1.87262 new best
Epoch: 129  2.55933 cross_bits=2.55847 objective=1.87281 new best
Epoch: 130  2.55918 cross_bits=2.55832 objective=1.87298 new best, reshuffling
Epoch: 131  2.559 cross_bits=2.55799 objective=1.87319 new best
Epoch: 132  2.55886 cross_bits=2.55785 objective=1.87344 new best
Epoch: 133  2.55871 cross_bits=2.55771 objective=1.87356 new best
Epoch: 134  2.55856 cross_bits=2.55757 objective=1.87371 new best
Epoch: 135  2.55842 cross_bits=2.55744 objective=1.87388 new best
Epoch: 136  2.55827 cross_bits=2.5573 objective=1.87404 new best
Epoch: 137  2.55813 cross_bits=2.55717 objective=1.87425 new best
Epoch: 138  2.55799 cross_bits=2.55704 objective=1.87443 new best
Epoch: 139  2.55786 cross_bits=2.55691 objective=1.87461 new best
Epoch: 140  2.55772 cross_bits=2.55679 objective=1.87477 new best
Epoch: 141  2.55759 cross_bits=2.55666 objective=1.8749 new best, reshuffling
Epoch: 142  2.55739 cross_bits=2.55692 objective=1.87454 worse network accepted, reshuffling
Epoch: 143  2.55739 cross_bits=2.55627 objective=1.87471 improvement accepted
Epoch: 144  2.55724 cross_bits=2.55616 objective=1.87487 improvement accepted
Epoch: 145  2.55712 cross_bits=2.55605 objective=1.87503 new best
Epoch: 146  2.55699 cross_bits=2.55593 objective=1.87516 new best
Epoch: 147  2.55687 cross_bits=2.55582 objective=1.87531 new best, reshuffling
Epoch: 148  2.55663 cross_bits=2.55637 objective=1.87477 worse network accepted, reshuffling
Epoch: 149  2.55656 cross_bits=2.55574 objective=1.87541 new best
Epoch: 150  2.55645 cross_bits=2.55563 objective=1.87564 new best
# Network initialization done
# command:# ReportNeuralNet networks/dunbrack-40pc-3157-t2k-IDGaaH13-3-13-7-13-9-13-11-strand_sep-seeded.net ok.
# Network initialization done
# Neural network printed.
# command:CPU_time= 58269.8 sec, elapsed time= 69111.4 sec)
# command:# Training Net with 50 estimation cycles.
Epoch: 151  2.55629 cross_bits=2.55638 objective=1.87457 worse network accepted, reshuffling
Epoch: 152  2.55618 cross_bits=2.55532 objective=1.87628 new best, reshuffling
Epoch: 153  2.55613 cross_bits=2.55518 objective=1.87662 new best
Epoch: 154  2.55603 cross_bits=2.55508 objective=1.87673 new best
Epoch: 155  2.55592 cross_bits=2.55498 objective=1.8769 new best
Epoch: 156  2.55582 cross_bits=2.55488 objective=1.87706 new best
Epoch: 157  2.55571 cross_bits=2.55478 objective=1.8772 new best, reshuffling
Epoch: 158  2.55555 cross_bits=2.55478 objective=1.87711 worse network accepted, reshuffling
Epoch: 159  2.55548 cross_bits=2.55457 objective=1.87705 worse network accepted, reshuffling
Epoch: 160  2.55535 cross_bits=2.55494 objective=1.87708 improvement accepted
Epoch: 161  2.5553 cross_bits=2.55485 objective=1.87724 new best
Epoch: 162  2.5552 cross_bits=2.55476 objective=1.87738 new best
Epoch: 163  2.55511 cross_bits=2.55467 objective=1.87751 new best
Epoch: 164  2.55502 cross_bits=2.55458 objective=1.87765 new best
Epoch: 165  2.55492 cross_bits=2.55449 objective=1.87771 new best
Epoch: 166  2.55483 cross_bits=2.5544 objective=1.8778 new best
Epoch: 167  2.55474 cross_bits=2.55431 objective=1.87792 new best
Epoch: 168  2.55465 cross_bits=2.55423 objective=1.878 new best, reshuffling
Epoch: 169  2.55452 cross_bits=2.55426 objective=1.87806 new best, reshuffling
Epoch: 170  2.55442 cross_bits=2.55375 objective=1.87881 new best
Epoch: 171  2.55435 cross_bits=2.55367 objective=1.87893 new best
Epoch: 172  2.55427 cross_bits=2.5536 objective=1.879 new best
Epoch: 173  2.55419 cross_bits=2.55352 objective=1.87906 new best
Epoch: 174  2.55411 cross_bits=2.55344 objective=1.87919 new best, reshuffling
Epoch: 175  2.55399 cross_bits=2.55322 objective=1.87918 worse network accepted, reshuffling
Epoch: 176  2.55404 cross_bits=2.55323 objective=1.87955 new best
Epoch: 177  2.55398 cross_bits=2.55316 objective=1.87969 new best, reshuffling
Epoch: 178  2.55375 cross_bits=2.55379 objective=1.87796 worse network rejected, reshuffling
Epoch: 179  2.55372 cross_bits=2.5532 objective=1.87924 worse network accepted, reshuffling
Epoch: 180  2.55377 cross_bits=2.55289 objective=1.87954 improvement accepted, reshuffling
Epoch: 181  2.55365 cross_bits=2.55342 objective=1.87953 worse network accepted, reshuffling
Epoch: 182  2.55362 cross_bits=2.55264 objective=1.88007 new best
Epoch: 183  2.55354 cross_bits=2.55258 objective=1.88017 new best
Epoch: 184  2.55347 cross_bits=2.55253 objective=1.88025 new best
Epoch: 185  2.55341 cross_bits=2.55247 objective=1.8803 new best
Epoch: 186  2.55334 cross_bits=2.55241 objective=1.88033 new best
Epoch: 187  2.55328 cross_bits=2.55236 objective=1.88037 new best
Epoch: 188  2.55322 cross_bits=2.5523 objective=1.88041 new best
Epoch: 189  2.55316 cross_bits=2.55225 objective=1.88049 new best
Epoch: 190  2.5531 cross_bits=2.55219 objective=1.88065 new best
Epoch: 191  2.55304 cross_bits=2.55214 objective=1.8807 new best, reshuffling
Epoch: 192  2.55292 cross_bits=2.55229 objective=1.88052 worse network accepted, reshuffling
Epoch: 193  2.55289 cross_bits=2.55342 objective=1.87951 worse network accepted, reshuffling
Epoch: 194  2.55286 cross_bits=2.55263 objective=1.87961 improvement accepted, reshuffling
Epoch: 195  2.55287 cross_bits=2.5526 objective=1.88057 improvement accepted
Epoch: 196  2.55283 cross_bits=2.55255 objective=1.88071 new best
Epoch: 197  2.55278 cross_bits=2.5525 objective=1.88075 new best
Epoch: 198  2.55273 cross_bits=2.55245 objective=1.88077 new best, reshuffling
Epoch: 199  2.55261 cross_bits=2.55179 objective=1.88131 new best
Epoch: 200  2.55255 cross_bits=2.55175 objective=1.8813 reset to old best (1.88131), reshuffling
# Network initialization done
# command:# ReportNeuralNet networks/dunbrack-40pc-3157-t2k-IDGaaH13-3-13-7-13-9-13-11-strand_sep-seeded.net ok.
# Network initialization done
# Neural network printed.
# command:CPU_time= 76495.6 sec, elapsed time= 88736.2 sec)
# command:# ReportTrainByChain quality-reports/dunbrack-40pc-3157-t2k-IDGaaH13-3-13-7-13-9-13-11-strand_sep-seeded.by-chain ok.
# command:# Testing net dunbrack-40pc-3157-t2k-IDGaaH13-3-13-7-13-9-13-11-strand_sep-seeded.net
# Network initialization done
# command:# ReportTrainByChain given with no output file.
# command:# ReportQvsPhatTo given with no output file.
# command:# ReportUnitUsageTo given with no output file.
# command:CPU_time= 76636 sec, elapsed time= 88881.9 sec)
# command: