# this is the sample for the aa alphabet directory. # when you copy to a new directory, change these values. ALPHANAME = aa ALPHADIR = str2-reverse # watch out for this one. some files contain several alphabets. # for example, str,str2,str3 are all defined in str.alphabet # alphalibfile indicates the output alphabet ?? ALPHALIBFILE = str.alphabet #This is for running the results for the predict-2nd paper. ARCHITECTURE = Gstr2-3-13-5-13-7-13-9 TXXALIGN = reverse #To test my version of predict-2nd #PREDICT-2ND = /cse/ugrads/rbingham/private/predict-2nd/bin/i686/opt/predict-2nd nrm: rm -r *n* logs/ quality-reports/ include ../Make.alphabet