# command:# Prefix for input files set to 
# command:# Prefix for output files set to 
# command:# Seed set to 1174574574
# command:# Read 2 alphabets and 0 BackgroundProbs from /projects/compbio/lib/alphabet/str.alphabet
# command:Unrecognized 1th alphabet way-back-11 for BackgroundProbs  that has no name
Unrecognized 1th alphabet near-backbone-11 for BackgroundProbs  that has no name
Unrecognized 1th alphabet rel_sa10 for BackgroundProbs  that has no name
Unrecognized 1th alphabet CB_burial_12_7 for BackgroundProbs  that has no name
Unrecognized 1th alphabet CB_burial_14_7 for BackgroundProbs  that has no name
Unrecognized 1th alphabet abs_sa7 for BackgroundProbs  that has no name
Unrecognized 1th alphabet alpha11 for BackgroundProbs  that has no name
Unrecognized 1th alphabet Bystroff for BackgroundProbs  that has no name
Unrecognized 1th alphabet chi1_3 for BackgroundProbs  that has no name
Unrecognized 1th alphabet dry_burial_6.5_7 for BackgroundProbs  that has no name
Unrecognized 1th alphabet dry_burial_8_7 for BackgroundProbs  that has no name
Unrecognized 1th alphabet dry_burial_12_7 for BackgroundProbs  that has no name
Unrecognized 1th alphabet DSSP for BackgroundProbs  that has no name
Unrecognized 1th alphabet EBGHSTL for BackgroundProbs  that has no name
Unrecognized 1th alphabet dssp_ehl2 for BackgroundProbs  that has no name
Unrecognized 1th alphabet STRIDE for BackgroundProbs  that has no name
Unrecognized 1th alphabet EBGHTL for BackgroundProbs  that has no name
Unrecognized 1th alphabet stride_ehl2 for BackgroundProbs  that has no name
Unrecognized 1th alphabet tco for BackgroundProbs  that has no name
Unrecognized 1th alphabet wet_burial_6.5_7 for BackgroundProbs  that has no name
Unrecognized 1th alphabet pb for BackgroundProbs  that has no name
Unrecognized 1th alphabet gamma_2 for BackgroundProbs  that has no name
Unrecognized 1th alphabet n_sep for BackgroundProbs  that has no name
Unrecognized 1th alphabet o_sep for BackgroundProbs  that has no name
Unrecognized 1th alphabet n_notor for BackgroundProbs  that has no name
Unrecognized 1th alphabet o_notor for BackgroundProbs  that has no name
Unrecognized 1th alphabet n_notor2 for BackgroundProbs  that has no name
Unrecognized 1th alphabet o_notor2 for BackgroundProbs  that has no name
# Read 0 alphabets and 3 BackgroundProbs from /projects/compbio/lib/alphabet/dunbrack-in-scop.backgrounds
# command:CPU_time= 0.006999 sec, elapsed time= 0.01049 sec)
# command:# Neural network set to dunbrack-30pc-1763-t06-thin90-IDGaaH13-3-13-7-13-9-13-11-tr31-str2-from-empty.net
# command:# command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/predict-2nd/testing/training-data/
# command:# reading script from file dunbrack-30pc-1763-2.t06-thin90-str2
# Prefix for input files set to 
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1umkA/nostruct-align/1umkA.t06-thin90.a2m.gz
# 1umkA.t06-thin90.a2m with 2592 sequences, total weight= 2592 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.984554 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1umkA/info/1umkA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1u/1umkA/nostruct-align/1umkA.t06-thin90.a2m.gz, have 271 columns in 1 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gmuA/nostruct-align/1gmuA.t06-thin90.a2m.gz
# 1gmuA.t06-thin90.a2m with 132 sequences, total weight= 60.8271 avg weight= 0.460811 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30055 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gmuA/info/1gmuA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gmuA/nostruct-align/1gmuA.t06-thin90.a2m.gz, have 409 columns in 2 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1aohA/nostruct-align/1aohA.t06-thin90.a2m.gz
# 1aohA.t06-thin90.a2m with 50 sequences, total weight= 13.6394 avg weight= 0.272787 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1aohA/info/1aohA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1a/1aohA/nostruct-align/1aohA.t06-thin90.a2m.gz, have 552 columns in 3 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s0aA/nostruct-align/1s0aA.t06-thin90.a2m.gz
# 1s0aA.t06-thin90.a2m with 5224 sequences, total weight= 5224 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00645 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s0aA/info/1s0aA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1s/1s0aA/nostruct-align/1s0aA.t06-thin90.a2m.gz, have 980 columns in 4 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g6gA/nostruct-align/1g6gA.t06-thin90.a2m.gz
# 1g6gA.t06-thin90.a2m with 1043 sequences, total weight= 1043 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.95841 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g6gA/info/1g6gA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1g/1g6gA/nostruct-align/1g6gA.t06-thin90.a2m.gz, have 1107 columns in 5 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1din/nostruct-align/1din.t06-thin90.a2m.gz
# 1din.t06-thin90.a2m with 11771 sequences, total weight= 11771 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.795087 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1din/info/1din.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1d/1din/nostruct-align/1din.t06-thin90.a2m.gz, have 1340 columns in 6 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jkeA/nostruct-align/1jkeA.t06-thin90.a2m.gz
# 1jkeA.t06-thin90.a2m with 276 sequences, total weight= 13.0866 avg weight= 0.0474154 36 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jkeA/info/1jkeA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jkeA/nostruct-align/1jkeA.t06-thin90.a2m.gz, have 1485 columns in 7 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tuvA/nostruct-align/1tuvA.t06-thin90.a2m.gz
# 1tuvA.t06-thin90.a2m with 410 sequences, total weight= 410 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09248 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tuvA/info/1tuvA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tuvA/nostruct-align/1tuvA.t06-thin90.a2m.gz, have 1588 columns in 8 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1ls9A/nostruct-align/1ls9A.t06-thin90.a2m.gz
# 1ls9A.t06-thin90.a2m with 1917 sequences, total weight= 1917 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11002 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1ls9A/info/1ls9A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1l/1ls9A/nostruct-align/1ls9A.t06-thin90.a2m.gz, have 1679 columns in 9 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gyvA/nostruct-align/1gyvA.t06-thin90.a2m.gz
# 1gyvA.t06-thin90.a2m with 77 sequences, total weight= 40.9907 avg weight= 0.532347 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gyvA/info/1gyvA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gyvA/nostruct-align/1gyvA.t06-thin90.a2m.gz, have 1799 columns in 10 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1ccwA/nostruct-align/1ccwA.t06-thin90.a2m.gz
# 1ccwA.t06-thin90.a2m with 512 sequences, total weight= 73.6072 avg weight= 0.143764 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30283 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1ccwA/info/1ccwA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1c/1ccwA/nostruct-align/1ccwA.t06-thin90.a2m.gz, have 1936 columns in 11 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iujA/nostruct-align/1iujA.t06-thin90.a2m.gz
# 1iujA.t06-thin90.a2m with 648 sequences, total weight= 648 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.934175 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iujA/info/1iujA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1i/1iujA/nostruct-align/1iujA.t06-thin90.a2m.gz, have 2038 columns in 12 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y8aA/nostruct-align/1y8aA.t06-thin90.a2m.gz
# 1y8aA.t06-thin90.a2m with 59 sequences, total weight= 59 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.154 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y8aA/info/1y8aA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1y/1y8aA/nostruct-align/1y8aA.t06-thin90.a2m.gz, have 2351 columns in 13 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1ako/nostruct-align/1ako.t06-thin90.a2m.gz
# 1ako.t06-thin90.a2m with 2258 sequences, total weight= 2258 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.878296 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1ako/info/1ako.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1a/1ako/nostruct-align/1ako.t06-thin90.a2m.gz, have 2619 columns in 14 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nh0A/nostruct-align/1nh0A.t06-thin90.a2m.gz
# 1nh0A.t06-thin90.a2m with 867 sequences, total weight= 2.79433 avg weight= 0.00322299 20 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nh0A/info/1nh0A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nh0A/nostruct-align/1nh0A.t06-thin90.a2m.gz, have 2718 columns in 15 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dlwA/nostruct-align/1dlwA.t06-thin90.a2m.gz
# 1dlwA.t06-thin90.a2m with 255 sequences, total weight= 255 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2519 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dlwA/info/1dlwA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dlwA/nostruct-align/1dlwA.t06-thin90.a2m.gz, have 2834 columns in 16 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o7sA/nostruct-align/1o7sA.t06-thin90.a2m.gz
# 1o7sA.t06-thin90.a2m with 11746 sequences, total weight= 42.7988 avg weight= 0.0036437 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30139 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o7sA/info/1o7sA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1o/1o7sA/nostruct-align/1o7sA.t06-thin90.a2m.gz, have 2946 columns in 17 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ixh/nostruct-align/1ixh.t06-thin90.a2m.gz
# 1ixh.t06-thin90.a2m with 662 sequences, total weight= 662 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17581 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ixh/info/1ixh.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1i/1ixh/nostruct-align/1ixh.t06-thin90.a2m.gz, have 3267 columns in 18 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uuzA/nostruct-align/1uuzA.t06-thin90.a2m.gz
# 1uuzA.t06-thin90.a2m with 20 sequences, total weight= 9.6707 avg weight= 0.483535 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uuzA/info/1uuzA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uuzA/nostruct-align/1uuzA.t06-thin90.a2m.gz, have 3396 columns in 19 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kwfA/nostruct-align/1kwfA.t06-thin90.a2m.gz
# 1kwfA.t06-thin90.a2m with 104 sequences, total weight= 104 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1322 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kwfA/info/1kwfA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kwfA/nostruct-align/1kwfA.t06-thin90.a2m.gz, have 3759 columns in 20 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pdo/nostruct-align/1pdo.t06-thin90.a2m.gz
# 1pdo.t06-thin90.a2m with 272 sequences, total weight= 150.138 avg weight= 0.551977 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3047 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pdo/info/1pdo.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pdo/nostruct-align/1pdo.t06-thin90.a2m.gz, have 3888 columns in 21 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j98A/nostruct-align/1j98A.t06-thin90.a2m.gz
# 1j98A.t06-thin90.a2m with 90 sequences, total weight= 6.99335 avg weight= 0.0777039 30 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j98A/info/1j98A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1j/1j98A/nostruct-align/1j98A.t06-thin90.a2m.gz, have 4042 columns in 22 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jidA/nostruct-align/1jidA.t06-thin90.a2m.gz
# 1jidA.t06-thin90.a2m with 76 sequences, total weight= 40.1249 avg weight= 0.527959 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jidA/info/1jidA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jidA/nostruct-align/1jidA.t06-thin90.a2m.gz, have 4156 columns in 23 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l2hA/nostruct-align/1l2hA.t06-thin90.a2m.gz
# 1l2hA.t06-thin90.a2m with 123 sequences, total weight= 47.2745 avg weight= 0.384346 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l2hA/info/1l2hA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1l/1l2hA/nostruct-align/1l2hA.t06-thin90.a2m.gz, have 4300 columns in 24 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kv7A/nostruct-align/1kv7A.t06-thin90.a2m.gz
# 1kv7A.t06-thin90.a2m with 1085 sequences, total weight= 1085 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09892 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kv7A/info/1kv7A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kv7A/nostruct-align/1kv7A.t06-thin90.a2m.gz, have 4763 columns in 25 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1ft5A/nostruct-align/1ft5A.t06-thin90.a2m.gz
# 1ft5A.t06-thin90.a2m with 964 sequences, total weight= 964 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.887727 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1ft5A/info/1ft5A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1f/1ft5A/nostruct-align/1ft5A.t06-thin90.a2m.gz, have 4974 columns in 26 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ytlA/nostruct-align/1ytlA.t06-thin90.a2m.gz
# 1ytlA.t06-thin90.a2m with 18 sequences, total weight= 8.42037 avg weight= 0.467798 22 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ytlA/info/1ytlA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1y/1ytlA/nostruct-align/1ytlA.t06-thin90.a2m.gz, have 5132 columns in 27 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ro7A/nostruct-align/1ro7A.t06-thin90.a2m.gz
# 1ro7A.t06-thin90.a2m with 9 sequences, total weight= 4.04976 avg weight= 0.449974 14 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ro7A/info/1ro7A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1r/1ro7A/nostruct-align/1ro7A.t06-thin90.a2m.gz, have 5390 columns in 28 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/4f/4fiv/nostruct-align/4fiv.t06-thin90.a2m.gz
# 4fiv.t06-thin90.a2m with 613 sequences, total weight= 4.57372 avg weight= 0.00746121 23 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/4f/4fiv/info/4fiv.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/4f/4fiv/nostruct-align/4fiv.t06-thin90.a2m.gz, have 5503 columns in 29 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lj8A/nostruct-align/1lj8A.t06-thin90.a2m.gz
# 1lj8A.t06-thin90.a2m with 262 sequences, total weight= 72.4218 avg weight= 0.276419 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30098 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lj8A/info/1lj8A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lj8A/nostruct-align/1lj8A.t06-thin90.a2m.gz, have 5995 columns in 30 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1z2nX/nostruct-align/1z2nX.t06-thin90.a2m.gz
# 1z2nX.t06-thin90.a2m with 4162 sequences, total weight= 4162 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.974372 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1z2nX/info/1z2nX.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1z/1z2nX/nostruct-align/1z2nX.t06-thin90.a2m.gz, have 6306 columns in 31 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qgvA/nostruct-align/1qgvA.t06-thin90.a2m.gz
# 1qgvA.t06-thin90.a2m with 202 sequences, total weight= 58.0053 avg weight= 0.287155 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qgvA/info/1qgvA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qgvA/nostruct-align/1qgvA.t06-thin90.a2m.gz, have 6436 columns in 32 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o6vA/nostruct-align/1o6vA.t06-thin90.a2m.gz
# 1o6vA.t06-thin90.a2m with 7888 sequences, total weight= 7888 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.931405 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o6vA/info/1o6vA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1o/1o6vA/nostruct-align/1o6vA.t06-thin90.a2m.gz, have 6898 columns in 33 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h6hA/nostruct-align/1h6hA.t06-thin90.a2m.gz
# 1h6hA.t06-thin90.a2m with 414 sequences, total weight= 414 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0744 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h6hA/info/1h6hA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h6hA/nostruct-align/1h6hA.t06-thin90.a2m.gz, have 7041 columns in 34 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ugxA/nostruct-align/1ugxA.t06-thin90.a2m.gz
# 1ugxA.t06-thin90.a2m with 254 sequences, total weight= 67.5819 avg weight= 0.26607 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3011 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ugxA/info/1ugxA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1u/1ugxA/nostruct-align/1ugxA.t06-thin90.a2m.gz, have 7174 columns in 35 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fx2A/nostruct-align/1fx2A.t06-thin90.a2m.gz
# 1fx2A.t06-thin90.a2m with 1223 sequences, total weight= 1223 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08908 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fx2A/info/1fx2A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fx2A/nostruct-align/1fx2A.t06-thin90.a2m.gz, have 7409 columns in 36 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gx3A/nostruct-align/1gx3A.t06-thin90.a2m.gz
# 1gx3A.t06-thin90.a2m with 156 sequences, total weight= 156 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21546 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gx3A/info/1gx3A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gx3A/nostruct-align/1gx3A.t06-thin90.a2m.gz, have 7685 columns in 37 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jhjA/nostruct-align/1jhjA.t06-thin90.a2m.gz
# 1jhjA.t06-thin90.a2m with 84 sequences, total weight= 39.1858 avg weight= 0.466498 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jhjA/info/1jhjA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jhjA/nostruct-align/1jhjA.t06-thin90.a2m.gz, have 7846 columns in 38 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kwgA/nostruct-align/1kwgA.t06-thin90.a2m.gz
# 1kwgA.t06-thin90.a2m with 801 sequences, total weight= 801 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.985655 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kwgA/info/1kwgA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kwgA/nostruct-align/1kwgA.t06-thin90.a2m.gz, have 8490 columns in 39 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uf5A/nostruct-align/1uf5A.t06-thin90.a2m.gz
# 1uf5A.t06-thin90.a2m with 1664 sequences, total weight= 1664 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08683 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uf5A/info/1uf5A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uf5A/nostruct-align/1uf5A.t06-thin90.a2m.gz, have 8793 columns in 40 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1z0pA/nostruct-align/1z0pA.t06-thin90.a2m.gz
# 1z0pA.t06-thin90.a2m with 8 sequences, total weight= 2.9708 avg weight= 0.37135 11 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1z0pA/info/1z0pA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1z/1z0pA/nostruct-align/1z0pA.t06-thin90.a2m.gz, have 8866 columns in 41 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p6oA/nostruct-align/1p6oA.t06-thin90.a2m.gz
# 1p6oA.t06-thin90.a2m with 1327 sequences, total weight= 1327 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1993 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p6oA/info/1p6oA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1p/1p6oA/nostruct-align/1p6oA.t06-thin90.a2m.gz, have 9022 columns in 42 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dowA/nostruct-align/1dowA.t06-thin90.a2m.gz
# 1dowA.t06-thin90.a2m with 57 sequences, total weight= 17.1239 avg weight= 0.300419 31 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dowA/info/1dowA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dowA/nostruct-align/1dowA.t06-thin90.a2m.gz, have 9227 columns in 43 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vprA/nostruct-align/1vprA.t06-thin90.a2m.gz
# 1vprA.t06-thin90.a2m with 13 sequences, total weight= 2.39839 avg weight= 0.184492 11 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vprA/info/1vprA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vprA/nostruct-align/1vprA.t06-thin90.a2m.gz, have 9578 columns in 44 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vpdA/nostruct-align/1vpdA.t06-thin90.a2m.gz
# 1vpdA.t06-thin90.a2m with 5717 sequences, total weight= 5717 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.867966 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vpdA/info/1vpdA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vpdA/nostruct-align/1vpdA.t06-thin90.a2m.gz, have 9872 columns in 45 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qf8A/nostruct-align/1qf8A.t06-thin90.a2m.gz
# 1qf8A.t06-thin90.a2m with 79 sequences, total weight= 11.3791 avg weight= 0.144039 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qf8A/info/1qf8A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qf8A/nostruct-align/1qf8A.t06-thin90.a2m.gz, have 10039 columns in 46 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i4uA/nostruct-align/1i4uA.t06-thin90.a2m.gz
# 1i4uA.t06-thin90.a2m with 651 sequences, total weight= 651 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.962209 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i4uA/info/1i4uA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1i/1i4uA/nostruct-align/1i4uA.t06-thin90.a2m.gz, have 10220 columns in 47 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xjvA/nostruct-align/1xjvA.t06-thin90.a2m.gz
# 1xjvA.t06-thin90.a2m with 57 sequences, total weight= 57 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07737 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xjvA/info/1xjvA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xjvA/nostruct-align/1xjvA.t06-thin90.a2m.gz, have 10511 columns in 48 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ytvA/nostruct-align/1ytvA.t06-thin90.a2m.gz
# 1ytvA.t06-thin90.a2m with 2584 sequences, total weight= 2584 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.868274 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ytvA/info/1ytvA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1y/1ytvA/nostruct-align/1ytvA.t06-thin90.a2m.gz, have 10877 columns in 49 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m0wA/nostruct-align/1m0wA.t06-thin90.a2m.gz
# 1m0wA.t06-thin90.a2m with 183 sequences, total weight= 172.203 avg weight= 0.940999 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m0wA/info/1m0wA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m0wA/nostruct-align/1m0wA.t06-thin90.a2m.gz, have 11358 columns in 50 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/4u/4uagA/nostruct-align/4uagA.t06-thin90.a2m.gz
# 4uagA.t06-thin90.a2m with 2222 sequences, total weight= 2222 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12765 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/4u/4uagA/info/4uagA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/4u/4uagA/nostruct-align/4uagA.t06-thin90.a2m.gz, have 11787 columns in 51 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vpbA/nostruct-align/1vpbA.t06-thin90.a2m.gz
# 1vpbA.t06-thin90.a2m with 548 sequences, total weight= 548 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23382 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vpbA/info/1vpbA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vpbA/nostruct-align/1vpbA.t06-thin90.a2m.gz, have 12224 columns in 52 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l9xA/nostruct-align/1l9xA.t06-thin90.a2m.gz
# 1l9xA.t06-thin90.a2m with 3441 sequences, total weight= 3441 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05133 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l9xA/info/1l9xA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1l/1l9xA/nostruct-align/1l9xA.t06-thin90.a2m.gz, have 12512 columns in 53 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rb9/nostruct-align/1rb9.t06-thin90.a2m.gz
# 1rb9.t06-thin90.a2m with 278 sequences, total weight= 10.5546 avg weight= 0.0379663 44 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rb9/info/1rb9.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rb9/nostruct-align/1rb9.t06-thin90.a2m.gz, have 12564 columns in 54 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n71A/nostruct-align/1n71A.t06-thin90.a2m.gz
# 1n71A.t06-thin90.a2m with 7098 sequences, total weight= 7098 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.774294 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n71A/info/1n71A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1n/1n71A/nostruct-align/1n71A.t06-thin90.a2m.gz, have 12744 columns in 55 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t7rA/nostruct-align/1t7rA.t06-thin90.a2m.gz
# 1t7rA.t06-thin90.a2m with 1017 sequences, total weight= 1017 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.997575 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t7rA/info/1t7rA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1t/1t7rA/nostruct-align/1t7rA.t06-thin90.a2m.gz, have 12994 columns in 56 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pj5A/nostruct-align/1pj5A.t06-thin90.a2m.gz
# 1pj5A.t06-thin90.a2m with 9734 sequences, total weight= 9734 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.975242 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pj5A/info/1pj5A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pj5A/nostruct-align/1pj5A.t06-thin90.a2m.gz, have 13821 columns in 57 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vdkA/nostruct-align/1vdkA.t06-thin90.a2m.gz
# 1vdkA.t06-thin90.a2m with 1317 sequences, total weight= 273.014 avg weight= 0.2073 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31952 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vdkA/info/1vdkA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vdkA/nostruct-align/1vdkA.t06-thin90.a2m.gz, have 14279 columns in 58 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2s/2sli/nostruct-align/2sli.t06-thin90.a2m.gz
# 2sli.t06-thin90.a2m with 1263 sequences, total weight= 1263 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00676 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2s/2sli/info/2sli.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/2s/2sli/nostruct-align/2sli.t06-thin90.a2m.gz, have 14958 columns in 59 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qs1A/nostruct-align/1qs1A.t06-thin90.a2m.gz
# 1qs1A.t06-thin90.a2m with 170 sequences, total weight= 170 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.989362 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qs1A/info/1qs1A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qs1A/nostruct-align/1qs1A.t06-thin90.a2m.gz, have 15360 columns in 60 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h4gA/nostruct-align/1h4gA.t06-thin90.a2m.gz
# 1h4gA.t06-thin90.a2m with 150 sequences, total weight= 13.6865 avg weight= 0.0912435 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h4gA/info/1h4gA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h4gA/nostruct-align/1h4gA.t06-thin90.a2m.gz, have 15566 columns in 61 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v8cA/nostruct-align/1v8cA.t06-thin90.a2m.gz
# 1v8cA.t06-thin90.a2m with 373 sequences, total weight= 121.123 avg weight= 0.324726 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30032 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v8cA/info/1v8cA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v8cA/nostruct-align/1v8cA.t06-thin90.a2m.gz, have 15731 columns in 62 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mk4A/nostruct-align/1mk4A.t06-thin90.a2m.gz
# 1mk4A.t06-thin90.a2m with 8268 sequences, total weight= 8268 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.801782 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mk4A/info/1mk4A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mk4A/nostruct-align/1mk4A.t06-thin90.a2m.gz, have 15888 columns in 63 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nh8A/nostruct-align/1nh8A.t06-thin90.a2m.gz
# 1nh8A.t06-thin90.a2m with 296 sequences, total weight= 44.5596 avg weight= 0.150539 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nh8A/info/1nh8A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nh8A/nostruct-align/1nh8A.t06-thin90.a2m.gz, have 16164 columns in 64 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vkpA/nostruct-align/1vkpA.t06-thin90.a2m.gz
# 1vkpA.t06-thin90.a2m with 171 sequences, total weight= 62.3447 avg weight= 0.364589 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vkpA/info/1vkpA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vkpA/nostruct-align/1vkpA.t06-thin90.a2m.gz, have 16529 columns in 65 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2s/2spcA/nostruct-align/2spcA.t06-thin90.a2m.gz
# 2spcA.t06-thin90.a2m with 1242 sequences, total weight= 1242 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07741 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2s/2spcA/info/2spcA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/2s/2spcA/nostruct-align/2spcA.t06-thin90.a2m.gz, have 16636 columns in 66 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yb3A/nostruct-align/1yb3A.t06-thin90.a2m.gz
# 1yb3A.t06-thin90.a2m with 5 sequences, total weight= 4.04753 avg weight= 0.809506 13 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yb3A/info/1yb3A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yb3A/nostruct-align/1yb3A.t06-thin90.a2m.gz, have 16802 columns in 67 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mgtA/nostruct-align/1mgtA.t06-thin90.a2m.gz
# 1mgtA.t06-thin90.a2m with 670 sequences, total weight= 268.241 avg weight= 0.40036 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31071 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mgtA/info/1mgtA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mgtA/nostruct-align/1mgtA.t06-thin90.a2m.gz, have 16971 columns in 68 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rutX/nostruct-align/1rutX.t06-thin90.a2m.gz
# 1rutX.t06-thin90.a2m with 1035 sequences, total weight= 1035 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14113 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rutX/info/1rutX.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rutX/nostruct-align/1rutX.t06-thin90.a2m.gz, have 17128 columns in 69 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1ht6A/nostruct-align/1ht6A.t06-thin90.a2m.gz
# 1ht6A.t06-thin90.a2m with 2514 sequences, total weight= 2514 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01853 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1ht6A/info/1ht6A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1h/1ht6A/nostruct-align/1ht6A.t06-thin90.a2m.gz, have 17532 columns in 70 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ok7A/nostruct-align/1ok7A.t06-thin90.a2m.gz
# 1ok7A.t06-thin90.a2m with 416 sequences, total weight= 151.088 avg weight= 0.363193 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30686 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ok7A/info/1ok7A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1o/1ok7A/nostruct-align/1ok7A.t06-thin90.a2m.gz, have 17898 columns in 71 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1czpA/nostruct-align/1czpA.t06-thin90.a2m.gz
# 1czpA.t06-thin90.a2m with 1318 sequences, total weight= 1318 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26771 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1czpA/info/1czpA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1c/1czpA/nostruct-align/1czpA.t06-thin90.a2m.gz, have 17996 columns in 72 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ojhA/nostruct-align/1ojhA.t06-thin90.a2m.gz
# 1ojhA.t06-thin90.a2m with 7 sequences, total weight= 4.22423 avg weight= 0.603462 14 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ojhA/info/1ojhA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1o/1ojhA/nostruct-align/1ojhA.t06-thin90.a2m.gz, have 18048 columns in 73 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1me4A/nostruct-align/1me4A.t06-thin90.a2m.gz
# 1me4A.t06-thin90.a2m with 1498 sequences, total weight= 422.472 avg weight= 0.282024 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32325 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1me4A/info/1me4A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1m/1me4A/nostruct-align/1me4A.t06-thin90.a2m.gz, have 18263 columns in 74 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g6xA/nostruct-align/1g6xA.t06-thin90.a2m.gz
# 1g6xA.t06-thin90.a2m with 659 sequences, total weight= 70.207 avg weight= 0.106536 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30541 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g6xA/info/1g6xA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1g/1g6xA/nostruct-align/1g6xA.t06-thin90.a2m.gz, have 18321 columns in 75 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x99A/nostruct-align/1x99A.t06-thin90.a2m.gz
# 1x99A.t06-thin90.a2m with 12 sequences, total weight= 5.84704 avg weight= 0.487254 16 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x99A/info/1x99A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1x/1x99A/nostruct-align/1x99A.t06-thin90.a2m.gz, have 18466 columns in 76 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ogiA/nostruct-align/1ogiA.t06-thin90.a2m.gz
# 1ogiA.t06-thin90.a2m with 2497 sequences, total weight= 2497 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.975834 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ogiA/info/1ogiA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1o/1ogiA/nostruct-align/1ogiA.t06-thin90.a2m.gz, have 18761 columns in 77 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jiwI/nostruct-align/1jiwI.t06-thin90.a2m.gz
# 1jiwI.t06-thin90.a2m with 26 sequences, total weight= 9.36476 avg weight= 0.360183 27 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jiwI/info/1jiwI.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jiwI/nostruct-align/1jiwI.t06-thin90.a2m.gz, have 18866 columns in 78 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pe1A/nostruct-align/1pe1A.t06-thin90.a2m.gz
# 1pe1A.t06-thin90.a2m with 629 sequences, total weight= 31.4539 avg weight= 0.0500062 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pe1A/info/1pe1A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pe1A/nostruct-align/1pe1A.t06-thin90.a2m.gz, have 19124 columns in 79 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mf7A/nostruct-align/1mf7A.t06-thin90.a2m.gz
# 1mf7A.t06-thin90.a2m with 2221 sequences, total weight= 2221 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.962706 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mf7A/info/1mf7A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mf7A/nostruct-align/1mf7A.t06-thin90.a2m.gz, have 19318 columns in 80 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pyoB/nostruct-align/1pyoB.t06-thin90.a2m.gz
# 1pyoB.t06-thin90.a2m with 154 sequences, total weight= 37.2441 avg weight= 0.241845 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pyoB/info/1pyoB.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pyoB/nostruct-align/1pyoB.t06-thin90.a2m.gz, have 19416 columns in 81 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tl9A/nostruct-align/1tl9A.t06-thin90.a2m.gz
# 1tl9A.t06-thin90.a2m with 371 sequences, total weight= 371 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2299 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tl9A/info/1tl9A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tl9A/nostruct-align/1tl9A.t06-thin90.a2m.gz, have 19737 columns in 82 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ob8A/nostruct-align/1ob8A.t06-thin90.a2m.gz
# 1ob8A.t06-thin90.a2m with 210 sequences, total weight= 194.6 avg weight= 0.926665 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30042 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ob8A/info/1ob8A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1o/1ob8A/nostruct-align/1ob8A.t06-thin90.a2m.gz, have 19856 columns in 83 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hxrA/nostruct-align/1hxrA.t06-thin90.a2m.gz
# 1hxrA.t06-thin90.a2m with 27 sequences, total weight= 13.6966 avg weight= 0.507282 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hxrA/info/1hxrA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hxrA/nostruct-align/1hxrA.t06-thin90.a2m.gz, have 19963 columns in 84 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g61A/nostruct-align/1g61A.t06-thin90.a2m.gz
# 1g61A.t06-thin90.a2m with 72 sequences, total weight= 13.7336 avg weight= 0.190744 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g61A/info/1g61A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1g/1g61A/nostruct-align/1g61A.t06-thin90.a2m.gz, have 20188 columns in 85 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1snrA/nostruct-align/1snrA.t06-thin90.a2m.gz
# 1snrA.t06-thin90.a2m with 1147 sequences, total weight= 1147 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12334 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1snrA/info/1snrA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1s/1snrA/nostruct-align/1snrA.t06-thin90.a2m.gz, have 20524 columns in 86 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vc4A/nostruct-align/1vc4A.t06-thin90.a2m.gz
# 1vc4A.t06-thin90.a2m with 914 sequences, total weight= 914 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20503 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vc4A/info/1vc4A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vc4A/nostruct-align/1vc4A.t06-thin90.a2m.gz, have 20778 columns in 87 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oxdA/nostruct-align/1oxdA.t06-thin90.a2m.gz
# 1oxdA.t06-thin90.a2m with 91 sequences, total weight= 18.5566 avg weight= 0.203919 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oxdA/info/1oxdA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oxdA/nostruct-align/1oxdA.t06-thin90.a2m.gz, have 21004 columns in 88 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1co6A/nostruct-align/1co6A.t06-thin90.a2m.gz
# 1co6A.t06-thin90.a2m with 379 sequences, total weight= 42.5508 avg weight= 0.112271 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3004 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1co6A/info/1co6A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1c/1co6A/nostruct-align/1co6A.t06-thin90.a2m.gz, have 21111 columns in 89 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1ftrA/nostruct-align/1ftrA.t06-thin90.a2m.gz
# 1ftrA.t06-thin90.a2m with 108 sequences, total weight= 6.73466 avg weight= 0.062358 26 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1ftrA/info/1ftrA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1f/1ftrA/nostruct-align/1ftrA.t06-thin90.a2m.gz, have 21407 columns in 90 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sjwA/nostruct-align/1sjwA.t06-thin90.a2m.gz
# 1sjwA.t06-thin90.a2m with 904 sequences, total weight= 904 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.862998 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sjwA/info/1sjwA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1s/1sjwA/nostruct-align/1sjwA.t06-thin90.a2m.gz, have 21549 columns in 91 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pbjA/nostruct-align/1pbjA.t06-thin90.a2m.gz
# 1pbjA.t06-thin90.a2m with 3461 sequences, total weight= 3461 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1336 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pbjA/info/1pbjA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pbjA/nostruct-align/1pbjA.t06-thin90.a2m.gz, have 21669 columns in 92 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g8mA/nostruct-align/1g8mA.t06-thin90.a2m.gz
# 1g8mA.t06-thin90.a2m with 369 sequences, total weight= 14.7362 avg weight= 0.0399354 39 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g8mA/info/1g8mA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1g/1g8mA/nostruct-align/1g8mA.t06-thin90.a2m.gz, have 22259 columns in 93 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vr5A/nostruct-align/1vr5A.t06-thin90.a2m.gz
# 1vr5A.t06-thin90.a2m with 1954 sequences, total weight= 1954 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04243 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vr5A/info/1vr5A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vr5A/nostruct-align/1vr5A.t06-thin90.a2m.gz, have 22795 columns in 94 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vm9A/nostruct-align/1vm9A.t06-thin90.a2m.gz
# 1vm9A.t06-thin90.a2m with 1610 sequences, total weight= 1610 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15862 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vm9A/info/1vm9A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vm9A/nostruct-align/1vm9A.t06-thin90.a2m.gz, have 22904 columns in 95 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uscA/nostruct-align/1uscA.t06-thin90.a2m.gz
# 1uscA.t06-thin90.a2m with 756 sequences, total weight= 756 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17344 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uscA/info/1uscA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uscA/nostruct-align/1uscA.t06-thin90.a2m.gz, have 23082 columns in 96 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jy1A/nostruct-align/1jy1A.t06-thin90.a2m.gz
# 1jy1A.t06-thin90.a2m with 71 sequences, total weight= 71 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24466 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jy1A/info/1jy1A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jy1A/nostruct-align/1jy1A.t06-thin90.a2m.gz, have 23521 columns in 97 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tgsI/nostruct-align/1tgsI.t06-thin90.a2m.gz
# 1tgsI.t06-thin90.a2m with 476 sequences, total weight= 98.6397 avg weight= 0.207226 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30936 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tgsI/info/1tgsI.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tgsI/nostruct-align/1tgsI.t06-thin90.a2m.gz, have 23577 columns in 98 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i27A/nostruct-align/1i27A.t06-thin90.a2m.gz
# 1i27A.t06-thin90.a2m with 12 sequences, total weight= 5.47489 avg weight= 0.456241 18 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i27A/info/1i27A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1i/1i27A/nostruct-align/1i27A.t06-thin90.a2m.gz, have 23650 columns in 99 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kjwA/nostruct-align/1kjwA.t06-thin90.a2m.gz
# 1kjwA.t06-thin90.a2m with 944 sequences, total weight= 944 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24178 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kjwA/info/1kjwA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kjwA/nostruct-align/1kjwA.t06-thin90.a2m.gz, have 23942 columns in 100 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fpoA/nostruct-align/1fpoA.t06-thin90.a2m.gz
# 1fpoA.t06-thin90.a2m with 2642 sequences, total weight= 2642 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00328 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fpoA/info/1fpoA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fpoA/nostruct-align/1fpoA.t06-thin90.a2m.gz, have 24113 columns in 101 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qsaA/nostruct-align/1qsaA.t06-thin90.a2m.gz
# 1qsaA.t06-thin90.a2m with 946 sequences, total weight= 946 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.930035 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qsaA/info/1qsaA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qsaA/nostruct-align/1qsaA.t06-thin90.a2m.gz, have 24731 columns in 102 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gwmA/nostruct-align/1gwmA.t06-thin90.a2m.gz
# 1gwmA.t06-thin90.a2m with 3 sequences, total weight= 2.75287 avg weight= 0.917623 9 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gwmA/info/1gwmA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gwmA/nostruct-align/1gwmA.t06-thin90.a2m.gz, have 24884 columns in 103 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vjvA/nostruct-align/1vjvA.t06-thin90.a2m.gz
# 1vjvA.t06-thin90.a2m with 1218 sequences, total weight= 1218 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02586 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vjvA/info/1vjvA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vjvA/nostruct-align/1vjvA.t06-thin90.a2m.gz, have 25251 columns in 104 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nlqA/nostruct-align/1nlqA.t06-thin90.a2m.gz
# 1nlqA.t06-thin90.a2m with 52 sequences, total weight= 11.0791 avg weight= 0.21306 26 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nlqA/info/1nlqA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nlqA/nostruct-align/1nlqA.t06-thin90.a2m.gz, have 25356 columns in 105 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b2pA/nostruct-align/1b2pA.t06-thin90.a2m.gz
# 1b2pA.t06-thin90.a2m with 225 sequences, total weight= 106.025 avg weight= 0.471222 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30157 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b2pA/info/1b2pA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1b/1b2pA/nostruct-align/1b2pA.t06-thin90.a2m.gz, have 25475 columns in 106 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fvkA/nostruct-align/1fvkA.t06-thin90.a2m.gz
# 1fvkA.t06-thin90.a2m with 1110 sequences, total weight= 1110 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.943618 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fvkA/info/1fvkA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fvkA/nostruct-align/1fvkA.t06-thin90.a2m.gz, have 25663 columns in 107 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ymtA/nostruct-align/1ymtA.t06-thin90.a2m.gz
# 1ymtA.t06-thin90.a2m with 1206 sequences, total weight= 1206 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.916166 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ymtA/info/1ymtA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1y/1ymtA/nostruct-align/1ymtA.t06-thin90.a2m.gz, have 25898 columns in 108 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pmi/nostruct-align/1pmi.t06-thin90.a2m.gz
# 1pmi.t06-thin90.a2m with 257 sequences, total weight= 245.332 avg weight= 0.9546 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3003 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pmi/info/1pmi.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pmi/nostruct-align/1pmi.t06-thin90.a2m.gz, have 26338 columns in 109 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uaiA/nostruct-align/1uaiA.t06-thin90.a2m.gz
# 1uaiA.t06-thin90.a2m with 66 sequences, total weight= 66 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28219 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uaiA/info/1uaiA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uaiA/nostruct-align/1uaiA.t06-thin90.a2m.gz, have 26561 columns in 110 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o8xA/nostruct-align/1o8xA.t06-thin90.a2m.gz
# 1o8xA.t06-thin90.a2m with 3746 sequences, total weight= 3746 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05426 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o8xA/info/1o8xA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1o/1o8xA/nostruct-align/1o8xA.t06-thin90.a2m.gz, have 26704 columns in 111 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nulA/nostruct-align/1nulA.t06-thin90.a2m.gz
# 1nulA.t06-thin90.a2m with 1007 sequences, total weight= 1007 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18752 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nulA/info/1nulA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nulA/nostruct-align/1nulA.t06-thin90.a2m.gz, have 26846 columns in 112 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wjxA/nostruct-align/1wjxA.t06-thin90.a2m.gz
# 1wjxA.t06-thin90.a2m with 297 sequences, total weight= 7.14979 avg weight= 0.0240734 32 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wjxA/info/1wjxA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wjxA/nostruct-align/1wjxA.t06-thin90.a2m.gz, have 26958 columns in 113 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tca/nostruct-align/1tca.t06-thin90.a2m.gz
# 1tca.t06-thin90.a2m with 7197 sequences, total weight= 7197 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.750473 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tca/info/1tca.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tca/nostruct-align/1tca.t06-thin90.a2m.gz, have 27275 columns in 114 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lugA/nostruct-align/1lugA.t06-thin90.a2m.gz
# 1lugA.t06-thin90.a2m with 450 sequences, total weight= 141.229 avg weight= 0.313841 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30521 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lugA/info/1lugA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lugA/nostruct-align/1lugA.t06-thin90.a2m.gz, have 27534 columns in 115 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wmhB/nostruct-align/1wmhB.t06-thin90.a2m.gz
# 1wmhB.t06-thin90.a2m with 21 sequences, total weight= 5.20398 avg weight= 0.247809 19 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wmhB/info/1wmhB.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wmhB/nostruct-align/1wmhB.t06-thin90.a2m.gz, have 27616 columns in 116 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oaiA/nostruct-align/1oaiA.t06-thin90.a2m.gz
# 1oaiA.t06-thin90.a2m with 23 sequences, total weight= 6.87745 avg weight= 0.29902 23 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oaiA/info/1oaiA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oaiA/nostruct-align/1oaiA.t06-thin90.a2m.gz, have 27675 columns in 117 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jr8A/nostruct-align/1jr8A.t06-thin90.a2m.gz
# 1jr8A.t06-thin90.a2m with 131 sequences, total weight= 115.87 avg weight= 0.884505 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30033 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jr8A/info/1jr8A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jr8A/nostruct-align/1jr8A.t06-thin90.a2m.gz, have 27780 columns in 118 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j1nA/nostruct-align/1j1nA.t06-thin90.a2m.gz
# 1j1nA.t06-thin90.a2m with 2507 sequences, total weight= 2507 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.868096 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j1nA/info/1j1nA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1j/1j1nA/nostruct-align/1j1nA.t06-thin90.a2m.gz, have 28272 columns in 119 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v58A/nostruct-align/1v58A.t06-thin90.a2m.gz
# 1v58A.t06-thin90.a2m with 1232 sequences, total weight= 1232 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.930283 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v58A/info/1v58A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v58A/nostruct-align/1v58A.t06-thin90.a2m.gz, have 28501 columns in 120 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w3oA/nostruct-align/1w3oA.t06-thin90.a2m.gz
# 1w3oA.t06-thin90.a2m with 570 sequences, total weight= 570 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01861 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w3oA/info/1w3oA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w3oA/nostruct-align/1w3oA.t06-thin90.a2m.gz, have 28705 columns in 121 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u4gA/nostruct-align/1u4gA.t06-thin90.a2m.gz
# 1u4gA.t06-thin90.a2m with 230 sequences, total weight= 230 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23959 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u4gA/info/1u4gA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1u/1u4gA/nostruct-align/1u4gA.t06-thin90.a2m.gz, have 29003 columns in 122 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kllA/nostruct-align/1kllA.t06-thin90.a2m.gz
# 1kllA.t06-thin90.a2m with 3580 sequences, total weight= 3580 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.861207 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kllA/info/1kllA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kllA/nostruct-align/1kllA.t06-thin90.a2m.gz, have 29131 columns in 123 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eexA/nostruct-align/1eexA.t06-thin90.a2m.gz
# 1eexA.t06-thin90.a2m with 18 sequences, total weight= 3.85802 avg weight= 0.214335 14 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eexA/info/1eexA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1e/1eexA/nostruct-align/1eexA.t06-thin90.a2m.gz, have 29682 columns in 124 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1roaA/nostruct-align/1roaA.t06-thin90.a2m.gz
# 1roaA.t06-thin90.a2m with 340 sequences, total weight= 340 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15215 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1roaA/info/1roaA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1r/1roaA/nostruct-align/1roaA.t06-thin90.a2m.gz, have 29793 columns in 125 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1atg/nostruct-align/1atg.t06-thin90.a2m.gz
# 1atg.t06-thin90.a2m with 3089 sequences, total weight= 3089 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.872487 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1atg/info/1atg.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1a/1atg/nostruct-align/1atg.t06-thin90.a2m.gz, have 30024 columns in 126 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f74A/nostruct-align/1f74A.t06-thin90.a2m.gz
# 1f74A.t06-thin90.a2m with 901 sequences, total weight= 901 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29661 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f74A/info/1f74A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1f/1f74A/nostruct-align/1f74A.t06-thin90.a2m.gz, have 30317 columns in 127 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v8hA/nostruct-align/1v8hA.t06-thin90.a2m.gz
# 1v8hA.t06-thin90.a2m with 87 sequences, total weight= 29.3985 avg weight= 0.337914 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v8hA/info/1v8hA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v8hA/nostruct-align/1v8hA.t06-thin90.a2m.gz, have 30423 columns in 128 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n62B/nostruct-align/1n62B.t06-thin90.a2m.gz
# 1n62B.t06-thin90.a2m with 881 sequences, total weight= 739.084 avg weight= 0.838915 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30347 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n62B/info/1n62B.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1n/1n62B/nostruct-align/1n62B.t06-thin90.a2m.gz, have 31227 columns in 129 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gpiA/nostruct-align/1gpiA.t06-thin90.a2m.gz
# 1gpiA.t06-thin90.a2m with 93 sequences, total weight= 8.38356 avg weight= 0.0901458 28 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gpiA/info/1gpiA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gpiA/nostruct-align/1gpiA.t06-thin90.a2m.gz, have 31658 columns in 130 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uylA/nostruct-align/1uylA.t06-thin90.a2m.gz
# 1uylA.t06-thin90.a2m with 487 sequences, total weight= 48.6116 avg weight= 0.0998185 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30052 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uylA/info/1uylA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uylA/nostruct-align/1uylA.t06-thin90.a2m.gz, have 31865 columns in 131 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f2tA/nostruct-align/1f2tA.t06-thin90.a2m.gz
# 1f2tA.t06-thin90.a2m with 13096 sequences, total weight= 13096 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.897159 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f2tA/info/1f2tA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1f/1f2tA/nostruct-align/1f2tA.t06-thin90.a2m.gz, have 32010 columns in 132 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hxn/nostruct-align/1hxn.t06-thin90.a2m.gz
# 1hxn.t06-thin90.a2m with 355 sequences, total weight= 348.613 avg weight= 0.982009 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hxn/info/1hxn.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hxn/nostruct-align/1hxn.t06-thin90.a2m.gz, have 32220 columns in 133 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tn6A/nostruct-align/1tn6A.t06-thin90.a2m.gz
# 1tn6A.t06-thin90.a2m with 325 sequences, total weight= 325 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.84431 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tn6A/info/1tn6A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tn6A/nostruct-align/1tn6A.t06-thin90.a2m.gz, have 32535 columns in 134 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qo7A/nostruct-align/1qo7A.t06-thin90.a2m.gz
# 1qo7A.t06-thin90.a2m with 9419 sequences, total weight= 9419 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.761347 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qo7A/info/1qo7A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qo7A/nostruct-align/1qo7A.t06-thin90.a2m.gz, have 32920 columns in 135 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y7rA/nostruct-align/1y7rA.t06-thin90.a2m.gz
# 1y7rA.t06-thin90.a2m with 7765 sequences, total weight= 7765 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.839303 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y7rA/info/1y7rA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1y/1y7rA/nostruct-align/1y7rA.t06-thin90.a2m.gz, have 33053 columns in 136 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lv7A/nostruct-align/1lv7A.t06-thin90.a2m.gz
# 1lv7A.t06-thin90.a2m with 9834 sequences, total weight= 9834 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.96605 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lv7A/info/1lv7A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lv7A/nostruct-align/1lv7A.t06-thin90.a2m.gz, have 33304 columns in 137 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2p/2por/nostruct-align/2por.t06-thin90.a2m.gz
# 2por.t06-thin90.a2m with 865 sequences, total weight= 865 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11159 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2p/2por/info/2por.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/2p/2por/nostruct-align/2por.t06-thin90.a2m.gz, have 33605 columns in 138 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s9uA/nostruct-align/1s9uA.t06-thin90.a2m.gz
# 1s9uA.t06-thin90.a2m with 295 sequences, total weight= 295 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06265 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s9uA/info/1s9uA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1s/1s9uA/nostruct-align/1s9uA.t06-thin90.a2m.gz, have 33806 columns in 139 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oa8A/nostruct-align/1oa8A.t06-thin90.a2m.gz
# 1oa8A.t06-thin90.a2m with 31 sequences, total weight= 12.9389 avg weight= 0.417383 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oa8A/info/1oa8A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oa8A/nostruct-align/1oa8A.t06-thin90.a2m.gz, have 33934 columns in 140 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j8bA/nostruct-align/1j8bA.t06-thin90.a2m.gz
# 1j8bA.t06-thin90.a2m with 279 sequences, total weight= 29.8979 avg weight= 0.107161 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j8bA/info/1j8bA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1j/1j8bA/nostruct-align/1j8bA.t06-thin90.a2m.gz, have 34026 columns in 141 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w23A/nostruct-align/1w23A.t06-thin90.a2m.gz
# 1w23A.t06-thin90.a2m with 3377 sequences, total weight= 3377 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.848749 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w23A/info/1w23A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w23A/nostruct-align/1w23A.t06-thin90.a2m.gz, have 34386 columns in 142 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n2eA/nostruct-align/1n2eA.t06-thin90.a2m.gz
# 1n2eA.t06-thin90.a2m with 320 sequences, total weight= 21.0058 avg weight= 0.0656432 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n2eA/info/1n2eA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1n/1n2eA/nostruct-align/1n2eA.t06-thin90.a2m.gz, have 34674 columns in 143 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eyeA/nostruct-align/1eyeA.t06-thin90.a2m.gz
# 1eyeA.t06-thin90.a2m with 674 sequences, total weight= 94.0461 avg weight= 0.139534 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30456 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eyeA/info/1eyeA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1e/1eyeA/nostruct-align/1eyeA.t06-thin90.a2m.gz, have 34930 columns in 144 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nscA/nostruct-align/1nscA.t06-thin90.a2m.gz
# 1nscA.t06-thin90.a2m with 70 sequences, total weight= 5.73158 avg weight= 0.0818797 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nscA/info/1nscA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nscA/nostruct-align/1nscA.t06-thin90.a2m.gz, have 35320 columns in 145 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hx0A/nostruct-align/1hx0A.t06-thin90.a2m.gz
# 1hx0A.t06-thin90.a2m with 2508 sequences, total weight= 2508 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.998256 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hx0A/info/1hx0A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hx0A/nostruct-align/1hx0A.t06-thin90.a2m.gz, have 35816 columns in 146 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qftA/nostruct-align/1qftA.t06-thin90.a2m.gz
# 1qftA.t06-thin90.a2m with 74 sequences, total weight= 74 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03648 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qftA/info/1qftA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qftA/nostruct-align/1qftA.t06-thin90.a2m.gz, have 35991 columns in 147 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g8aA/nostruct-align/1g8aA.t06-thin90.a2m.gz
# 1g8aA.t06-thin90.a2m with 12834 sequences, total weight= 12834 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.716196 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g8aA/info/1g8aA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1g/1g8aA/nostruct-align/1g8aA.t06-thin90.a2m.gz, have 36218 columns in 148 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b9mA/nostruct-align/1b9mA.t06-thin90.a2m.gz
# 1b9mA.t06-thin90.a2m with 721 sequences, total weight= 721 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0349 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b9mA/info/1b9mA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1b/1b9mA/nostruct-align/1b9mA.t06-thin90.a2m.gz, have 36476 columns in 149 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k2xB/nostruct-align/1k2xB.t06-thin90.a2m.gz
# 1k2xB.t06-thin90.a2m with 202 sequences, total weight= 35.1365 avg weight= 0.173943 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30062 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k2xB/info/1k2xB.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1k/1k2xB/nostruct-align/1k2xB.t06-thin90.a2m.gz, have 36611 columns in 150 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yfqA/nostruct-align/1yfqA.t06-thin90.a2m.gz
# 1yfqA.t06-thin90.a2m with 7808 sequences, total weight= 7808 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.690716 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yfqA/info/1yfqA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yfqA/nostruct-align/1yfqA.t06-thin90.a2m.gz, have 36953 columns in 151 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xkpC/nostruct-align/1xkpC.t06-thin90.a2m.gz
# 1xkpC.t06-thin90.a2m with 9 sequences, total weight= 5.32768 avg weight= 0.591965 18 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xkpC/info/1xkpC.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xkpC/nostruct-align/1xkpC.t06-thin90.a2m.gz, have 37079 columns in 152 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dtdB/nostruct-align/1dtdB.t06-thin90.a2m.gz
# 1dtdB.t06-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.675221 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dtdB/info/1dtdB.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dtdB/nostruct-align/1dtdB.t06-thin90.a2m.gz, have 37140 columns in 153 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g8eA/nostruct-align/1g8eA.t06-thin90.a2m.gz
# 1g8eA.t06-thin90.a2m with 37 sequences, total weight= 8.01036 avg weight= 0.216496 27 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g8eA/info/1g8eA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1g/1g8eA/nostruct-align/1g8eA.t06-thin90.a2m.gz, have 37238 columns in 154 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q5zA/nostruct-align/1q5zA.t06-thin90.a2m.gz
# 1q5zA.t06-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.588933 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q5zA/info/1q5zA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1q/1q5zA/nostruct-align/1q5zA.t06-thin90.a2m.gz, have 37383 columns in 155 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s99A/nostruct-align/1s99A.t06-thin90.a2m.gz
# 1s99A.t06-thin90.a2m with 14 sequences, total weight= 8.24076 avg weight= 0.588625 15 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s99A/info/1s99A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1s/1s99A/nostruct-align/1s99A.t06-thin90.a2m.gz, have 37569 columns in 156 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w6uA/nostruct-align/1w6uA.t06-thin90.a2m.gz
# 1w6uA.t06-thin90.a2m with 12726 sequences, total weight= 12726 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04284 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w6uA/info/1w6uA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w6uA/nostruct-align/1w6uA.t06-thin90.a2m.gz, have 37857 columns in 157 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sluA/nostruct-align/1sluA.t06-thin90.a2m.gz
# 1sluA.t06-thin90.a2m with 39 sequences, total weight= 12.3717 avg weight= 0.317224 28 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sluA/info/1sluA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1s/1sluA/nostruct-align/1sluA.t06-thin90.a2m.gz, have 37988 columns in 158 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1itxA/nostruct-align/1itxA.t06-thin90.a2m.gz
# 1itxA.t06-thin90.a2m with 1076 sequences, total weight= 1076 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09315 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1itxA/info/1itxA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1i/1itxA/nostruct-align/1itxA.t06-thin90.a2m.gz, have 38407 columns in 159 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o97D/nostruct-align/1o97D.t06-thin90.a2m.gz
# 1o97D.t06-thin90.a2m with 706 sequences, total weight= 74.8438 avg weight= 0.106011 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30189 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o97D/info/1o97D.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1o/1o97D/nostruct-align/1o97D.t06-thin90.a2m.gz, have 38722 columns in 160 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/4e/4eugA/nostruct-align/4eugA.t06-thin90.a2m.gz
# 4eugA.t06-thin90.a2m with 330 sequences, total weight= 21.1498 avg weight= 0.0640904 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/4e/4eugA/info/4eugA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/4e/4eugA/nostruct-align/4eugA.t06-thin90.a2m.gz, have 38947 columns in 161 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wrrA/nostruct-align/1wrrA.t06-thin90.a2m.gz
# 1wrrA.t06-thin90.a2m with 71 sequences, total weight= 13.8389 avg weight= 0.194914 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wrrA/info/1wrrA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wrrA/nostruct-align/1wrrA.t06-thin90.a2m.gz, have 39242 columns in 162 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vh5A/nostruct-align/1vh5A.t06-thin90.a2m.gz
# 1vh5A.t06-thin90.a2m with 1386 sequences, total weight= 1386 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.963368 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vh5A/info/1vh5A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vh5A/nostruct-align/1vh5A.t06-thin90.a2m.gz, have 39380 columns in 163 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vljA/nostruct-align/1vljA.t06-thin90.a2m.gz
# 1vljA.t06-thin90.a2m with 1357 sequences, total weight= 1357 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14797 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vljA/info/1vljA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vljA/nostruct-align/1vljA.t06-thin90.a2m.gz, have 39778 columns in 164 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rjdA/nostruct-align/1rjdA.t06-thin90.a2m.gz
# 1rjdA.t06-thin90.a2m with 447 sequences, total weight= 447 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.992165 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rjdA/info/1rjdA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rjdA/nostruct-align/1rjdA.t06-thin90.a2m.gz, have 40106 columns in 165 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pwbA/nostruct-align/1pwbA.t06-thin90.a2m.gz
# 1pwbA.t06-thin90.a2m with 2489 sequences, total weight= 2489 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.964491 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pwbA/info/1pwbA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pwbA/nostruct-align/1pwbA.t06-thin90.a2m.gz, have 40257 columns in 166 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cv8/nostruct-align/1cv8.t06-thin90.a2m.gz
# 1cv8.t06-thin90.a2m with 5 sequences, total weight= 2.72305 avg weight= 0.54461 10 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cv8/info/1cv8.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1c/1cv8/nostruct-align/1cv8.t06-thin90.a2m.gz, have 40430 columns in 167 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rylA/nostruct-align/1rylA.t06-thin90.a2m.gz
# 1rylA.t06-thin90.a2m with 20 sequences, total weight= 20 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24363 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rylA/info/1rylA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rylA/nostruct-align/1rylA.t06-thin90.a2m.gz, have 40587 columns in 168 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1irdB/nostruct-align/1irdB.t06-thin90.a2m.gz
# 1irdB.t06-thin90.a2m with 786 sequences, total weight= 129.827 avg weight= 0.165174 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31082 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1irdB/info/1irdB.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1i/1irdB/nostruct-align/1irdB.t06-thin90.a2m.gz, have 40733 columns in 169 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hbnB/nostruct-align/1hbnB.t06-thin90.a2m.gz
# 1hbnB.t06-thin90.a2m with 23 sequences, total weight= 3.85587 avg weight= 0.167646 17 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hbnB/info/1hbnB.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hbnB/nostruct-align/1hbnB.t06-thin90.a2m.gz, have 41175 columns in 170 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j3wA/nostruct-align/1j3wA.t06-thin90.a2m.gz
# 1j3wA.t06-thin90.a2m with 15 sequences, total weight= 7.02398 avg weight= 0.468265 22 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j3wA/info/1j3wA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1j/1j3wA/nostruct-align/1j3wA.t06-thin90.a2m.gz, have 41309 columns in 171 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1twdA/nostruct-align/1twdA.t06-thin90.a2m.gz
# 1twdA.t06-thin90.a2m with 128 sequences, total weight= 38.9349 avg weight= 0.304179 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1twdA/info/1twdA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1t/1twdA/nostruct-align/1twdA.t06-thin90.a2m.gz, have 41543 columns in 172 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dmhA/nostruct-align/1dmhA.t06-thin90.a2m.gz
# 1dmhA.t06-thin90.a2m with 412 sequences, total weight= 196.465 avg weight= 0.476856 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3028 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dmhA/info/1dmhA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dmhA/nostruct-align/1dmhA.t06-thin90.a2m.gz, have 41852 columns in 173 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xffA/nostruct-align/1xffA.t06-thin90.a2m.gz
# 1xffA.t06-thin90.a2m with 1653 sequences, total weight= 1653 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24573 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xffA/info/1xffA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xffA/nostruct-align/1xffA.t06-thin90.a2m.gz, have 42090 columns in 174 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1ka1A/nostruct-align/1ka1A.t06-thin90.a2m.gz
# 1ka1A.t06-thin90.a2m with 1270 sequences, total weight= 1270 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11712 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1ka1A/info/1ka1A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1k/1ka1A/nostruct-align/1ka1A.t06-thin90.a2m.gz, have 42444 columns in 175 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pq1A/nostruct-align/1pq1A.t06-thin90.a2m.gz
# 1pq1A.t06-thin90.a2m with 160 sequences, total weight= 160 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11833 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pq1A/info/1pq1A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pq1A/nostruct-align/1pq1A.t06-thin90.a2m.gz, have 42591 columns in 176 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ejdA/nostruct-align/1ejdA.t06-thin90.a2m.gz
# 1ejdA.t06-thin90.a2m with 832 sequences, total weight= 93.4012 avg weight= 0.112261 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30529 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ejdA/info/1ejdA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1e/1ejdA/nostruct-align/1ejdA.t06-thin90.a2m.gz, have 43010 columns in 177 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1el5A/nostruct-align/1el5A.t06-thin90.a2m.gz
# 1el5A.t06-thin90.a2m with 10834 sequences, total weight= 10834 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.72324 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1el5A/info/1el5A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1e/1el5A/nostruct-align/1el5A.t06-thin90.a2m.gz, have 43395 columns in 178 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ursA/nostruct-align/1ursA.t06-thin90.a2m.gz
# 1ursA.t06-thin90.a2m with 2660 sequences, total weight= 2660 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.852421 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ursA/info/1ursA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1u/1ursA/nostruct-align/1ursA.t06-thin90.a2m.gz, have 43761 columns in 179 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1svsA/nostruct-align/1svsA.t06-thin90.a2m.gz
# 1svsA.t06-thin90.a2m with 766 sequences, total weight= 116.372 avg weight= 0.151922 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30201 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1svsA/info/1svsA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1s/1svsA/nostruct-align/1svsA.t06-thin90.a2m.gz, have 44077 columns in 180 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q35A/nostruct-align/1q35A.t06-thin90.a2m.gz
# 1q35A.t06-thin90.a2m with 2927 sequences, total weight= 2927 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.823812 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q35A/info/1q35A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1q/1q35A/nostruct-align/1q35A.t06-thin90.a2m.gz, have 44394 columns in 181 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gnuA/nostruct-align/1gnuA.t06-thin90.a2m.gz
# 1gnuA.t06-thin90.a2m with 124 sequences, total weight= 26.9303 avg weight= 0.21718 42 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gnuA/info/1gnuA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gnuA/nostruct-align/1gnuA.t06-thin90.a2m.gz, have 44511 columns in 182 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vhh/nostruct-align/1vhh.t06-thin90.a2m.gz
# 1vhh.t06-thin90.a2m with 59 sequences, total weight= 5.5186 avg weight= 0.0935357 19 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vhh/info/1vhh.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vhh/nostruct-align/1vhh.t06-thin90.a2m.gz, have 44668 columns in 183 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gcqC/nostruct-align/1gcqC.t06-thin90.a2m.gz
# 1gcqC.t06-thin90.a2m with 738 sequences, total weight= 116.622 avg weight= 0.158024 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31138 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gcqC/info/1gcqC.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gcqC/nostruct-align/1gcqC.t06-thin90.a2m.gz, have 44737 columns in 184 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g2bA/nostruct-align/1g2bA.t06-thin90.a2m.gz
# 1g2bA.t06-thin90.a2m with 21 sequences, total weight= 6.15389 avg weight= 0.293043 19 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g2bA/info/1g2bA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1g/1g2bA/nostruct-align/1g2bA.t06-thin90.a2m.gz, have 44799 columns in 185 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oi7A/nostruct-align/1oi7A.t06-thin90.a2m.gz
# 1oi7A.t06-thin90.a2m with 665 sequences, total weight= 176.998 avg weight= 0.266163 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30938 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oi7A/info/1oi7A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oi7A/nostruct-align/1oi7A.t06-thin90.a2m.gz, have 45069 columns in 186 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v77A/nostruct-align/1v77A.t06-thin90.a2m.gz
# 1v77A.t06-thin90.a2m with 146 sequences, total weight= 146 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08777 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v77A/info/1v77A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v77A/nostruct-align/1v77A.t06-thin90.a2m.gz, have 45271 columns in 187 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l7lA/nostruct-align/1l7lA.t06-thin90.a2m.gz
# 1l7lA.t06-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0258 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l7lA/info/1l7lA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1l/1l7lA/nostruct-align/1l7lA.t06-thin90.a2m.gz, have 45392 columns in 188 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rvkA/nostruct-align/1rvkA.t06-thin90.a2m.gz
# 1rvkA.t06-thin90.a2m with 1436 sequences, total weight= 1436 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18698 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rvkA/info/1rvkA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rvkA/nostruct-align/1rvkA.t06-thin90.a2m.gz, have 45773 columns in 189 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sdsA/nostruct-align/1sdsA.t06-thin90.a2m.gz
# 1sdsA.t06-thin90.a2m with 500 sequences, total weight= 500 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29222 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sdsA/info/1sdsA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1s/1sdsA/nostruct-align/1sdsA.t06-thin90.a2m.gz, have 45888 columns in 190 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xpmA/nostruct-align/1xpmA.t06-thin90.a2m.gz
# 1xpmA.t06-thin90.a2m with 1562 sequences, total weight= 1562 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07909 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xpmA/info/1xpmA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xpmA/nostruct-align/1xpmA.t06-thin90.a2m.gz, have 46277 columns in 191 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ifc/nostruct-align/1ifc.t06-thin90.a2m.gz
# 1ifc.t06-thin90.a2m with 308 sequences, total weight= 55.8851 avg weight= 0.181445 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ifc/info/1ifc.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1i/1ifc/nostruct-align/1ifc.t06-thin90.a2m.gz, have 46408 columns in 192 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kolA/nostruct-align/1kolA.t06-thin90.a2m.gz
# 1kolA.t06-thin90.a2m with 5061 sequences, total weight= 5061 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07426 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kolA/info/1kolA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kolA/nostruct-align/1kolA.t06-thin90.a2m.gz, have 46804 columns in 193 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lxjA/nostruct-align/1lxjA.t06-thin90.a2m.gz
# 1lxjA.t06-thin90.a2m with 139 sequences, total weight= 44.4281 avg weight= 0.319626 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lxjA/info/1lxjA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lxjA/nostruct-align/1lxjA.t06-thin90.a2m.gz, have 46908 columns in 194 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54C/nostruct-align/1v54C.t06-thin90.a2m.gz
# 1v54C.t06-thin90.a2m with 1086 sequences, total weight= 84.6842 avg weight= 0.0779781 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30234 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54C/info/1v54C.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v54C/nostruct-align/1v54C.t06-thin90.a2m.gz, have 47167 columns in 195 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dusA/nostruct-align/1dusA.t06-thin90.a2m.gz
# 1dusA.t06-thin90.a2m with 14907 sequences, total weight= 14907 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.694212 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dusA/info/1dusA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dusA/nostruct-align/1dusA.t06-thin90.a2m.gz, have 47361 columns in 196 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vl2A/nostruct-align/1vl2A.t06-thin90.a2m.gz
# 1vl2A.t06-thin90.a2m with 2084 sequences, total weight= 2084 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25597 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vl2A/info/1vl2A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vl2A/nostruct-align/1vl2A.t06-thin90.a2m.gz, have 47759 columns in 197 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1viaA/nostruct-align/1viaA.t06-thin90.a2m.gz
# 1viaA.t06-thin90.a2m with 7034 sequences, total weight= 7034 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.836735 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1viaA/info/1viaA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1viaA/nostruct-align/1viaA.t06-thin90.a2m.gz, have 47920 columns in 198 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pb7A/nostruct-align/1pb7A.t06-thin90.a2m.gz
# 1pb7A.t06-thin90.a2m with 2655 sequences, total weight= 2655 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.934415 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pb7A/info/1pb7A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pb7A/nostruct-align/1pb7A.t06-thin90.a2m.gz, have 48201 columns in 199 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lyvA/nostruct-align/1lyvA.t06-thin90.a2m.gz
# 1lyvA.t06-thin90.a2m with 1055 sequences, total weight= 1055 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20753 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lyvA/info/1lyvA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lyvA/nostruct-align/1lyvA.t06-thin90.a2m.gz, have 48484 columns in 200 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lb3A/nostruct-align/1lb3A.t06-thin90.a2m.gz
# 1lb3A.t06-thin90.a2m with 668 sequences, total weight= 668 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2683 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lb3A/info/1lb3A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lb3A/nostruct-align/1lb3A.t06-thin90.a2m.gz, have 48651 columns in 201 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c3pA/nostruct-align/1c3pA.t06-thin90.a2m.gz
# 1c3pA.t06-thin90.a2m with 721 sequences, total weight= 511.079 avg weight= 0.708848 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3063 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c3pA/info/1c3pA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1c/1c3pA/nostruct-align/1c3pA.t06-thin90.a2m.gz, have 49023 columns in 202 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b8zA/nostruct-align/1b8zA.t06-thin90.a2m.gz
# 1b8zA.t06-thin90.a2m with 516 sequences, total weight= 16.3314 avg weight= 0.03165 45 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b8zA/info/1b8zA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1b/1b8zA/nostruct-align/1b8zA.t06-thin90.a2m.gz, have 49090 columns in 203 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wb4A/nostruct-align/1wb4A.t06-thin90.a2m.gz
# 1wb4A.t06-thin90.a2m with 4739 sequences, total weight= 4739 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.721877 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wb4A/info/1wb4A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wb4A/nostruct-align/1wb4A.t06-thin90.a2m.gz, have 49373 columns in 204 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uteA/nostruct-align/1uteA.t06-thin90.a2m.gz
# 1uteA.t06-thin90.a2m with 3460 sequences, total weight= 3460 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.670659 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uteA/info/1uteA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uteA/nostruct-align/1uteA.t06-thin90.a2m.gz, have 49675 columns in 205 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1ks8A/nostruct-align/1ks8A.t06-thin90.a2m.gz
# 1ks8A.t06-thin90.a2m with 305 sequences, total weight= 90.2397 avg weight= 0.295868 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30141 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1ks8A/info/1ks8A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1k/1ks8A/nostruct-align/1ks8A.t06-thin90.a2m.gz, have 50108 columns in 206 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1ssxA/nostruct-align/1ssxA.t06-thin90.a2m.gz
# 1ssxA.t06-thin90.a2m with 4222 sequences, total weight= 4222 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14347 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1ssxA/info/1ssxA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1s/1ssxA/nostruct-align/1ssxA.t06-thin90.a2m.gz, have 50306 columns in 207 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ou8A/nostruct-align/1ou8A.t06-thin90.a2m.gz
# 1ou8A.t06-thin90.a2m with 83 sequences, total weight= 8.15117 avg weight= 0.0982069 30 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ou8A/info/1ou8A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1o/1ou8A/nostruct-align/1ou8A.t06-thin90.a2m.gz, have 50412 columns in 208 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bbkL/nostruct-align/2bbkL.t06-thin90.a2m.gz
# 2bbkL.t06-thin90.a2m with 14 sequences, total weight= 3.29532 avg weight= 0.23538 18 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bbkL/info/2bbkL.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bbkL/nostruct-align/2bbkL.t06-thin90.a2m.gz, have 50537 columns in 209 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3c/3chbD/nostruct-align/3chbD.t06-thin90.a2m.gz
# 3chbD.t06-thin90.a2m with 7 sequences, total weight= 2.54586 avg weight= 0.363694 9 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3c/3chbD/info/3chbD.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/3c/3chbD/nostruct-align/3chbD.t06-thin90.a2m.gz, have 50640 columns in 210 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mpgA/nostruct-align/1mpgA.t06-thin90.a2m.gz
# 1mpgA.t06-thin90.a2m with 1092 sequences, total weight= 1092 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05389 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mpgA/info/1mpgA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mpgA/nostruct-align/1mpgA.t06-thin90.a2m.gz, have 50922 columns in 211 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1so7A/nostruct-align/1so7A.t06-thin90.a2m.gz
# 1so7A.t06-thin90.a2m with 1325 sequences, total weight= 1325 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.949589 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1so7A/info/1so7A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1s/1so7A/nostruct-align/1so7A.t06-thin90.a2m.gz, have 51283 columns in 212 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1os6A/nostruct-align/1os6A.t06-thin90.a2m.gz
# 1os6A.t06-thin90.a2m with 143 sequences, total weight= 86.3027 avg weight= 0.603516 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30204 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1os6A/info/1os6A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1o/1os6A/nostruct-align/1os6A.t06-thin90.a2m.gz, have 51354 columns in 213 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fjhA/nostruct-align/1fjhA.t06-thin90.a2m.gz
# 1fjhA.t06-thin90.a2m with 11385 sequences, total weight= 11385 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14702 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fjhA/info/1fjhA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fjhA/nostruct-align/1fjhA.t06-thin90.a2m.gz, have 51590 columns in 214 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1obfO/nostruct-align/1obfO.t06-thin90.a2m.gz
# 1obfO.t06-thin90.a2m with 1656 sequences, total weight= 63.0543 avg weight= 0.0380763 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1obfO/info/1obfO.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1o/1obfO/nostruct-align/1obfO.t06-thin90.a2m.gz, have 51925 columns in 215 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gvfA/nostruct-align/1gvfA.t06-thin90.a2m.gz
# 1gvfA.t06-thin90.a2m with 392 sequences, total weight= 35.1314 avg weight= 0.089621 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gvfA/info/1gvfA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gvfA/nostruct-align/1gvfA.t06-thin90.a2m.gz, have 52198 columns in 216 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pvmA/nostruct-align/1pvmA.t06-thin90.a2m.gz
# 1pvmA.t06-thin90.a2m with 3910 sequences, total weight= 3910 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.981361 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pvmA/info/1pvmA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pvmA/nostruct-align/1pvmA.t06-thin90.a2m.gz, have 52376 columns in 217 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pu6A/nostruct-align/1pu6A.t06-thin90.a2m.gz
# 1pu6A.t06-thin90.a2m with 1205 sequences, total weight= 1205 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10032 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pu6A/info/1pu6A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pu6A/nostruct-align/1pu6A.t06-thin90.a2m.gz, have 52593 columns in 218 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vfjA/nostruct-align/1vfjA.t06-thin90.a2m.gz
# 1vfjA.t06-thin90.a2m with 426 sequences, total weight= 22.9521 avg weight= 0.0538782 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vfjA/info/1vfjA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vfjA/nostruct-align/1vfjA.t06-thin90.a2m.gz, have 52709 columns in 219 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mixA/nostruct-align/1mixA.t06-thin90.a2m.gz
# 1mixA.t06-thin90.a2m with 541 sequences, total weight= 541 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07031 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mixA/info/1mixA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mixA/nostruct-align/1mixA.t06-thin90.a2m.gz, have 52915 columns in 220 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eexB/nostruct-align/1eexB.t06-thin90.a2m.gz
# 1eexB.t06-thin90.a2m with 31 sequences, total weight= 12.7458 avg weight= 0.411154 24 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eexB/info/1eexB.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1e/1eexB/nostruct-align/1eexB.t06-thin90.a2m.gz, have 53093 columns in 221 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i9zA/nostruct-align/1i9zA.t06-thin90.a2m.gz
# 1i9zA.t06-thin90.a2m with 1416 sequences, total weight= 1416 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.92667 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i9zA/info/1i9zA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1i/1i9zA/nostruct-align/1i9zA.t06-thin90.a2m.gz, have 53429 columns in 222 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h16A/nostruct-align/1h16A.t06-thin90.a2m.gz
# 1h16A.t06-thin90.a2m with 176 sequences, total weight= 79.8617 avg weight= 0.45376 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h16A/info/1h16A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h16A/nostruct-align/1h16A.t06-thin90.a2m.gz, have 54188 columns in 223 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fnlA/nostruct-align/1fnlA.t06-thin90.a2m.gz
# 1fnlA.t06-thin90.a2m with 9709 sequences, total weight= 9709 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.92723 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fnlA/info/1fnlA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fnlA/nostruct-align/1fnlA.t06-thin90.a2m.gz, have 54361 columns in 224 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1epxA/nostruct-align/1epxA.t06-thin90.a2m.gz
# 1epxA.t06-thin90.a2m with 325 sequences, total weight= 18.7824 avg weight= 0.057792 35 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1epxA/info/1epxA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1e/1epxA/nostruct-align/1epxA.t06-thin90.a2m.gz, have 54718 columns in 225 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i2tA/nostruct-align/1i2tA.t06-thin90.a2m.gz
# 1i2tA.t06-thin90.a2m with 99 sequences, total weight= 10.3138 avg weight= 0.10418 32 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i2tA/info/1i2tA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1i/1i2tA/nostruct-align/1i2tA.t06-thin90.a2m.gz, have 54779 columns in 226 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nnlA/nostruct-align/1nnlA.t06-thin90.a2m.gz
# 1nnlA.t06-thin90.a2m with 6706 sequences, total weight= 6706 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.914857 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nnlA/info/1nnlA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nnlA/nostruct-align/1nnlA.t06-thin90.a2m.gz, have 54984 columns in 227 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54G/nostruct-align/1v54G.t06-thin90.a2m.gz
# 1v54G.t06-thin90.a2m with 53 sequences, total weight= 13.0703 avg weight= 0.24661 27 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54G/info/1v54G.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v54G/nostruct-align/1v54G.t06-thin90.a2m.gz, have 55068 columns in 228 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fk5A/nostruct-align/1fk5A.t06-thin90.a2m.gz
# 1fk5A.t06-thin90.a2m with 219 sequences, total weight= 43.1991 avg weight= 0.197256 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30039 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fk5A/info/1fk5A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fk5A/nostruct-align/1fk5A.t06-thin90.a2m.gz, have 55161 columns in 229 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1al3/nostruct-align/1al3.t06-thin90.a2m.gz
# 1al3.t06-thin90.a2m with 7575 sequences, total weight= 7575 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24471 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1al3/info/1al3.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1a/1al3/nostruct-align/1al3.t06-thin90.a2m.gz, have 55398 columns in 230 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tx4A/nostruct-align/1tx4A.t06-thin90.a2m.gz
# 1tx4A.t06-thin90.a2m with 1000 sequences, total weight= 1000 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18387 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tx4A/info/1tx4A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tx4A/nostruct-align/1tx4A.t06-thin90.a2m.gz, have 55594 columns in 231 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w2wA/nostruct-align/1w2wA.t06-thin90.a2m.gz
# 1w2wA.t06-thin90.a2m with 201 sequences, total weight= 32.5672 avg weight= 0.162026 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w2wA/info/1w2wA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w2wA/nostruct-align/1w2wA.t06-thin90.a2m.gz, have 55805 columns in 232 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r0mA/nostruct-align/1r0mA.t06-thin90.a2m.gz
# 1r0mA.t06-thin90.a2m with 1454 sequences, total weight= 1454 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17984 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r0mA/info/1r0mA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r0mA/nostruct-align/1r0mA.t06-thin90.a2m.gz, have 56165 columns in 233 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nthA/nostruct-align/1nthA.t06-thin90.a2m.gz
# 1nthA.t06-thin90.a2m with 4 sequences, total weight= 2.87974 avg weight= 0.719934 9 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nthA/info/1nthA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nthA/nostruct-align/1nthA.t06-thin90.a2m.gz, have 56622 columns in 234 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c4qA/nostruct-align/1c4qA.t06-thin90.a2m.gz
# 1c4qA.t06-thin90.a2m with 12 sequences, total weight= 2.92882 avg weight= 0.244068 10 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c4qA/info/1c4qA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1c/1c4qA/nostruct-align/1c4qA.t06-thin90.a2m.gz, have 56691 columns in 235 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jzgA/nostruct-align/1jzgA.t06-thin90.a2m.gz
# 1jzgA.t06-thin90.a2m with 138 sequences, total weight= 40.8843 avg weight= 0.296263 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jzgA/info/1jzgA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jzgA/nostruct-align/1jzgA.t06-thin90.a2m.gz, have 56819 columns in 236 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n62A/nostruct-align/1n62A.t06-thin90.a2m.gz
# 1n62A.t06-thin90.a2m with 985 sequences, total weight= 164.998 avg weight= 0.16751 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31762 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n62A/info/1n62A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1n/1n62A/nostruct-align/1n62A.t06-thin90.a2m.gz, have 56980 columns in 237 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h0hB/nostruct-align/1h0hB.t06-thin90.a2m.gz
# 1h0hB.t06-thin90.a2m with 1239 sequences, total weight= 1239 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07739 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h0hB/info/1h0hB.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h0hB/nostruct-align/1h0hB.t06-thin90.a2m.gz, have 57194 columns in 238 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mg4A/nostruct-align/1mg4A.t06-thin90.a2m.gz
# 1mg4A.t06-thin90.a2m with 120 sequences, total weight= 50.507 avg weight= 0.420892 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mg4A/info/1mg4A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mg4A/nostruct-align/1mg4A.t06-thin90.a2m.gz, have 57295 columns in 239 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1omrA/nostruct-align/1omrA.t06-thin90.a2m.gz
# 1omrA.t06-thin90.a2m with 2971 sequences, total weight= 2971 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.883645 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1omrA/info/1omrA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1o/1omrA/nostruct-align/1omrA.t06-thin90.a2m.gz, have 57496 columns in 240 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f60A/nostruct-align/1f60A.t06-thin90.a2m.gz
# 1f60A.t06-thin90.a2m with 2491 sequences, total weight= 316.09 avg weight= 0.126893 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32785 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f60A/info/1f60A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1f/1f60A/nostruct-align/1f60A.t06-thin90.a2m.gz, have 57936 columns in 241 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gvp/nostruct-align/1gvp.t06-thin90.a2m.gz
# 1gvp.t06-thin90.a2m with 15 sequences, total weight= 6.979 avg weight= 0.465267 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gvp/info/1gvp.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gvp/nostruct-align/1gvp.t06-thin90.a2m.gz, have 58023 columns in 242 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1knmA/nostruct-align/1knmA.t06-thin90.a2m.gz
# 1knmA.t06-thin90.a2m with 444 sequences, total weight= 444 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0834 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1knmA/info/1knmA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1k/1knmA/nostruct-align/1knmA.t06-thin90.a2m.gz, have 58152 columns in 243 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y6xA/nostruct-align/1y6xA.t06-thin90.a2m.gz
# 1y6xA.t06-thin90.a2m with 290 sequences, total weight= 15.2098 avg weight= 0.0524477 44 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y6xA/info/1y6xA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1y/1y6xA/nostruct-align/1y6xA.t06-thin90.a2m.gz, have 58239 columns in 244 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b9wA/nostruct-align/1b9wA.t06-thin90.a2m.gz
# 1b9wA.t06-thin90.a2m with 28 sequences, total weight= 5.74027 avg weight= 0.20501 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b9wA/info/1b9wA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1b/1b9wA/nostruct-align/1b9wA.t06-thin90.a2m.gz, have 58328 columns in 245 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o9gA/nostruct-align/1o9gA.t06-thin90.a2m.gz
# 1o9gA.t06-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.859184 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o9gA/info/1o9gA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1o/1o9gA/nostruct-align/1o9gA.t06-thin90.a2m.gz, have 58577 columns in 246 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fjjA/nostruct-align/1fjjA.t06-thin90.a2m.gz
# 1fjjA.t06-thin90.a2m with 421 sequences, total weight= 421 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27841 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fjjA/info/1fjjA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fjjA/nostruct-align/1fjjA.t06-thin90.a2m.gz, have 58736 columns in 247 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1ccwB/nostruct-align/1ccwB.t06-thin90.a2m.gz
# 1ccwB.t06-thin90.a2m with 302 sequences, total weight= 73.8537 avg weight= 0.244549 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30042 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1ccwB/info/1ccwB.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1c/1ccwB/nostruct-align/1ccwB.t06-thin90.a2m.gz, have 59219 columns in 248 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1josA/nostruct-align/1josA.t06-thin90.a2m.gz
# 1josA.t06-thin90.a2m with 312 sequences, total weight= 42.969 avg weight= 0.137721 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30066 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1josA/info/1josA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1j/1josA/nostruct-align/1josA.t06-thin90.a2m.gz, have 59319 columns in 249 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1obdA/nostruct-align/1obdA.t06-thin90.a2m.gz
# 1obdA.t06-thin90.a2m with 375 sequences, total weight= 50.7357 avg weight= 0.135295 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1obdA/info/1obdA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1o/1obdA/nostruct-align/1obdA.t06-thin90.a2m.gz, have 59617 columns in 250 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xmtA/nostruct-align/1xmtA.t06-thin90.a2m.gz
# 1xmtA.t06-thin90.a2m with 170 sequences, total weight= 75.564 avg weight= 0.444494 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30102 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xmtA/info/1xmtA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xmtA/nostruct-align/1xmtA.t06-thin90.a2m.gz, have 59712 columns in 251 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rx0A/nostruct-align/1rx0A.t06-thin90.a2m.gz
# 1rx0A.t06-thin90.a2m with 3457 sequences, total weight= 3457 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15487 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rx0A/info/1rx0A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rx0A/nostruct-align/1rx0A.t06-thin90.a2m.gz, have 60096 columns in 252 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p99A/nostruct-align/1p99A.t06-thin90.a2m.gz
# 1p99A.t06-thin90.a2m with 969 sequences, total weight= 969 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05269 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p99A/info/1p99A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1p/1p99A/nostruct-align/1p99A.t06-thin90.a2m.gz, have 60351 columns in 253 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2l/2lisA/nostruct-align/2lisA.t06-thin90.a2m.gz
# 2lisA.t06-thin90.a2m with 29 sequences, total weight= 10.7616 avg weight= 0.37109 24 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2l/2lisA/info/2lisA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/2l/2lisA/nostruct-align/2lisA.t06-thin90.a2m.gz, have 60482 columns in 254 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vfyA/nostruct-align/1vfyA.t06-thin90.a2m.gz
# 1vfyA.t06-thin90.a2m with 453 sequences, total weight= 61.5461 avg weight= 0.135863 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3063 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vfyA/info/1vfyA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vfyA/nostruct-align/1vfyA.t06-thin90.a2m.gz, have 60549 columns in 255 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h72C/nostruct-align/1h72C.t06-thin90.a2m.gz
# 1h72C.t06-thin90.a2m with 1296 sequences, total weight= 1296 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01378 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h72C/info/1h72C.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h72C/nostruct-align/1h72C.t06-thin90.a2m.gz, have 60845 columns in 256 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1olrA/nostruct-align/1olrA.t06-thin90.a2m.gz
# 1olrA.t06-thin90.a2m with 90 sequences, total weight= 36.4431 avg weight= 0.404923 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1olrA/info/1olrA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1o/1olrA/nostruct-align/1olrA.t06-thin90.a2m.gz, have 61069 columns in 257 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nycA/nostruct-align/1nycA.t06-thin90.a2m.gz
# 1nycA.t06-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04307 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nycA/info/1nycA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nycA/nostruct-align/1nycA.t06-thin90.a2m.gz, have 61180 columns in 258 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gs5A/nostruct-align/1gs5A.t06-thin90.a2m.gz
# 1gs5A.t06-thin90.a2m with 1716 sequences, total weight= 1716 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19795 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gs5A/info/1gs5A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gs5A/nostruct-align/1gs5A.t06-thin90.a2m.gz, have 61438 columns in 259 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h5uA/nostruct-align/1h5uA.t06-thin90.a2m.gz
# 1h5uA.t06-thin90.a2m with 405 sequences, total weight= 46.8469 avg weight= 0.115671 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h5uA/info/1h5uA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h5uA/nostruct-align/1h5uA.t06-thin90.a2m.gz, have 62249 columns in 260 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lfwA/nostruct-align/1lfwA.t06-thin90.a2m.gz
# 1lfwA.t06-thin90.a2m with 2806 sequences, total weight= 2806 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.981751 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lfwA/info/1lfwA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lfwA/nostruct-align/1lfwA.t06-thin90.a2m.gz, have 62717 columns in 261 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t06-thin90.a2m.gz
# 7odcA.t06-thin90.a2m with 1254 sequences, total weight= 1254 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13296 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/7o/7odcA/info/7odcA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t06-thin90.a2m.gz, have 63104 columns in 262 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rm6A/nostruct-align/1rm6A.t06-thin90.a2m.gz
# 1rm6A.t06-thin90.a2m with 888 sequences, total weight= 416.768 avg weight= 0.469334 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31141 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rm6A/info/1rm6A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rm6A/nostruct-align/1rm6A.t06-thin90.a2m.gz, have 63865 columns in 263 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pa7A/nostruct-align/1pa7A.t06-thin90.a2m.gz
# 1pa7A.t06-thin90.a2m with 92 sequences, total weight= 21.1465 avg weight= 0.229854 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pa7A/info/1pa7A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pa7A/nostruct-align/1pa7A.t06-thin90.a2m.gz, have 63995 columns in 264 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d8wA/nostruct-align/1d8wA.t06-thin90.a2m.gz
# 1d8wA.t06-thin90.a2m with 570 sequences, total weight= 570 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14443 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d8wA/info/1d8wA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1d/1d8wA/nostruct-align/1d8wA.t06-thin90.a2m.gz, have 64397 columns in 265 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bteA/nostruct-align/1bteA.t06-thin90.a2m.gz
# 1bteA.t06-thin90.a2m with 46 sequences, total weight= 39.0794 avg weight= 0.849553 45 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bteA/info/1bteA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1b/1bteA/nostruct-align/1bteA.t06-thin90.a2m.gz, have 64489 columns in 266 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kt6A/nostruct-align/1kt6A.t06-thin90.a2m.gz
# 1kt6A.t06-thin90.a2m with 549 sequences, total weight= 549 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.984384 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kt6A/info/1kt6A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kt6A/nostruct-align/1kt6A.t06-thin90.a2m.gz, have 64664 columns in 267 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mof/nostruct-align/1mof.t06-thin90.a2m.gz
# 1mof.t06-thin90.a2m with 108 sequences, total weight= 12.184 avg weight= 0.112815 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mof/info/1mof.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mof/nostruct-align/1mof.t06-thin90.a2m.gz, have 64717 columns in 268 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vjoA/nostruct-align/1vjoA.t06-thin90.a2m.gz
# 1vjoA.t06-thin90.a2m with 12005 sequences, total weight= 12005 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.841389 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vjoA/info/1vjoA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vjoA/nostruct-align/1vjoA.t06-thin90.a2m.gz, have 65094 columns in 269 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mqvA/nostruct-align/1mqvA.t06-thin90.a2m.gz
# 1mqvA.t06-thin90.a2m with 116 sequences, total weight= 85.4579 avg weight= 0.736706 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30049 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mqvA/info/1mqvA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mqvA/nostruct-align/1mqvA.t06-thin90.a2m.gz, have 65217 columns in 270 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t0bA/nostruct-align/1t0bA.t06-thin90.a2m.gz
# 1t0bA.t06-thin90.a2m with 155 sequences, total weight= 155 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04716 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t0bA/info/1t0bA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1t/1t0bA/nostruct-align/1t0bA.t06-thin90.a2m.gz, have 65457 columns in 271 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r45A/nostruct-align/1r45A.t06-thin90.a2m.gz
# 1r45A.t06-thin90.a2m with 51 sequences, total weight= 51 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13145 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r45A/info/1r45A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r45A/nostruct-align/1r45A.t06-thin90.a2m.gz, have 65658 columns in 272 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3h/3htsB/nostruct-align/3htsB.t06-thin90.a2m.gz
# 3htsB.t06-thin90.a2m with 189 sequences, total weight= 23.4535 avg weight= 0.124092 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3h/3htsB/info/3htsB.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/3h/3htsB/nostruct-align/3htsB.t06-thin90.a2m.gz, have 65740 columns in 273 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c75A/nostruct-align/1c75A.t06-thin90.a2m.gz
# 1c75A.t06-thin90.a2m with 1084 sequences, total weight= 531.758 avg weight= 0.490551 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31751 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c75A/info/1c75A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1c/1c75A/nostruct-align/1c75A.t06-thin90.a2m.gz, have 65811 columns in 274 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yleA/nostruct-align/1yleA.t06-thin90.a2m.gz
# 1yleA.t06-thin90.a2m with 86 sequences, total weight= 12.1746 avg weight= 0.141565 35 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yleA/info/1yleA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yleA/nostruct-align/1yleA.t06-thin90.a2m.gz, have 66141 columns in 275 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vknA/nostruct-align/1vknA.t06-thin90.a2m.gz
# 1vknA.t06-thin90.a2m with 1593 sequences, total weight= 1593 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1557 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vknA/info/1vknA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vknA/nostruct-align/1vknA.t06-thin90.a2m.gz, have 66481 columns in 276 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dg6A/nostruct-align/1dg6A.t06-thin90.a2m.gz
# 1dg6A.t06-thin90.a2m with 175 sequences, total weight= 62.5419 avg weight= 0.357383 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dg6A/info/1dg6A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dg6A/nostruct-align/1dg6A.t06-thin90.a2m.gz, have 66630 columns in 277 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a62/nostruct-align/1a62.t06-thin90.a2m.gz
# 1a62.t06-thin90.a2m with 198 sequences, total weight= 12.4139 avg weight= 0.0626967 38 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a62/info/1a62.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1a/1a62/nostruct-align/1a62.t06-thin90.a2m.gz, have 66755 columns in 278 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m55A/nostruct-align/1m55A.t06-thin90.a2m.gz
# 1m55A.t06-thin90.a2m with 12 sequences, total weight= 12 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21956 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m55A/info/1m55A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m55A/nostruct-align/1m55A.t06-thin90.a2m.gz, have 66948 columns in 279 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bgc/nostruct-align/1bgc.t06-thin90.a2m.gz
# 1bgc.t06-thin90.a2m with 60 sequences, total weight= 29.1052 avg weight= 0.485087 36 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bgc/info/1bgc.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1b/1bgc/nostruct-align/1bgc.t06-thin90.a2m.gz, have 67106 columns in 280 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tu7A/nostruct-align/1tu7A.t06-thin90.a2m.gz
# 1tu7A.t06-thin90.a2m with 3462 sequences, total weight= 3462 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.998612 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tu7A/info/1tu7A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tu7A/nostruct-align/1tu7A.t06-thin90.a2m.gz, have 67314 columns in 281 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qxyA/nostruct-align/1qxyA.t06-thin90.a2m.gz
# 1qxyA.t06-thin90.a2m with 1719 sequences, total weight= 1719 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19398 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qxyA/info/1qxyA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qxyA/nostruct-align/1qxyA.t06-thin90.a2m.gz, have 67563 columns in 282 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1shuX/nostruct-align/1shuX.t06-thin90.a2m.gz
# 1shuX.t06-thin90.a2m with 2687 sequences, total weight= 2687 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.920845 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1shuX/info/1shuX.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1s/1shuX/nostruct-align/1shuX.t06-thin90.a2m.gz, have 67744 columns in 283 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f9zA/nostruct-align/1f9zA.t06-thin90.a2m.gz
# 1f9zA.t06-thin90.a2m with 3565 sequences, total weight= 3565 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.903514 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f9zA/info/1f9zA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1f/1f9zA/nostruct-align/1f9zA.t06-thin90.a2m.gz, have 67872 columns in 284 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h8uA/nostruct-align/1h8uA.t06-thin90.a2m.gz
# 1h8uA.t06-thin90.a2m with 2050 sequences, total weight= 2050 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07124 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h8uA/info/1h8uA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h8uA/nostruct-align/1h8uA.t06-thin90.a2m.gz, have 67987 columns in 285 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uoyA/nostruct-align/1uoyA.t06-thin90.a2m.gz
# 1uoyA.t06-thin90.a2m with 3 sequences, total weight= 2.26554 avg weight= 0.75518 8 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uoyA/info/1uoyA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uoyA/nostruct-align/1uoyA.t06-thin90.a2m.gz, have 68051 columns in 286 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j54A/nostruct-align/1j54A.t06-thin90.a2m.gz
# 1j54A.t06-thin90.a2m with 1494 sequences, total weight= 1494 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06896 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j54A/info/1j54A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1j/1j54A/nostruct-align/1j54A.t06-thin90.a2m.gz, have 68225 columns in 287 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rkiA/nostruct-align/1rkiA.t06-thin90.a2m.gz
# 1rkiA.t06-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.625635 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rkiA/info/1rkiA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rkiA/nostruct-align/1rkiA.t06-thin90.a2m.gz, have 68326 columns in 288 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1ji7A/nostruct-align/1ji7A.t06-thin90.a2m.gz
# 1ji7A.t06-thin90.a2m with 96 sequences, total weight= 47.8095 avg weight= 0.498016 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1ji7A/info/1ji7A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1j/1ji7A/nostruct-align/1ji7A.t06-thin90.a2m.gz, have 68403 columns in 289 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wd3A/nostruct-align/1wd3A.t06-thin90.a2m.gz
# 1wd3A.t06-thin90.a2m with 76 sequences, total weight= 70.9116 avg weight= 0.933048 32 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wd3A/info/1wd3A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wd3A/nostruct-align/1wd3A.t06-thin90.a2m.gz, have 68885 columns in 290 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q74A/nostruct-align/1q74A.t06-thin90.a2m.gz
# 1q74A.t06-thin90.a2m with 431 sequences, total weight= 431 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.984225 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q74A/info/1q74A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1q/1q74A/nostruct-align/1q74A.t06-thin90.a2m.gz, have 69172 columns in 291 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r7aA/nostruct-align/1r7aA.t06-thin90.a2m.gz
# 1r7aA.t06-thin90.a2m with 1188 sequences, total weight= 1188 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.979401 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r7aA/info/1r7aA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r7aA/nostruct-align/1r7aA.t06-thin90.a2m.gz, have 69676 columns in 292 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wd7A/nostruct-align/1wd7A.t06-thin90.a2m.gz
# 1wd7A.t06-thin90.a2m with 454 sequences, total weight= 454 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07904 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wd7A/info/1wd7A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wd7A/nostruct-align/1wd7A.t06-thin90.a2m.gz, have 69930 columns in 293 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sc3A/nostruct-align/1sc3A.t06-thin90.a2m.gz
# 1sc3A.t06-thin90.a2m with 345 sequences, total weight= 345 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23798 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sc3A/info/1sc3A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1s/1sc3A/nostruct-align/1sc3A.t06-thin90.a2m.gz, have 70103 columns in 294 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jyhA/nostruct-align/1jyhA.t06-thin90.a2m.gz
# 1jyhA.t06-thin90.a2m with 391 sequences, total weight= 391 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.979361 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jyhA/info/1jyhA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jyhA/nostruct-align/1jyhA.t06-thin90.a2m.gz, have 70258 columns in 295 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m9zA/nostruct-align/1m9zA.t06-thin90.a2m.gz
# 1m9zA.t06-thin90.a2m with 16 sequences, total weight= 4.95752 avg weight= 0.309845 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m9zA/info/1m9zA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m9zA/nostruct-align/1m9zA.t06-thin90.a2m.gz, have 70363 columns in 296 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54A/nostruct-align/1v54A.t06-thin90.a2m.gz
# 1v54A.t06-thin90.a2m with 1857 sequences, total weight= 15.3882 avg weight= 0.0082866 38 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54A/info/1v54A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v54A/nostruct-align/1v54A.t06-thin90.a2m.gz, have 70877 columns in 297 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wddS/nostruct-align/1wddS.t06-thin90.a2m.gz
# 1wddS.t06-thin90.a2m with 216 sequences, total weight= 12.2427 avg weight= 0.0566791 32 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wddS/info/1wddS.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wddS/nostruct-align/1wddS.t06-thin90.a2m.gz, have 70999 columns in 298 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1udzA/nostruct-align/1udzA.t06-thin90.a2m.gz
# 1udzA.t06-thin90.a2m with 1315 sequences, total weight= 350.049 avg weight= 0.266197 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32464 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1udzA/info/1udzA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1u/1udzA/nostruct-align/1udzA.t06-thin90.a2m.gz, have 71178 columns in 299 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1luzA/nostruct-align/1luzA.t06-thin90.a2m.gz
# 1luzA.t06-thin90.a2m with 11 sequences, total weight= 5.88033 avg weight= 0.534575 18 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1luzA/info/1luzA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1l/1luzA/nostruct-align/1luzA.t06-thin90.a2m.gz, have 71263 columns in 300 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dc1A/nostruct-align/1dc1A.t06-thin90.a2m.gz
# 1dc1A.t06-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14377 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dc1A/info/1dc1A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dc1A/nostruct-align/1dc1A.t06-thin90.a2m.gz, have 71573 columns in 301 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rdqE/nostruct-align/1rdqE.t06-thin90.a2m.gz
# 1rdqE.t06-thin90.a2m with 13999 sequences, total weight= 13999 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03755 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rdqE/info/1rdqE.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rdqE/nostruct-align/1rdqE.t06-thin90.a2m.gz, have 71915 columns in 302 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ye8A/nostruct-align/1ye8A.t06-thin90.a2m.gz
# 1ye8A.t06-thin90.a2m with 7585 sequences, total weight= 7585 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.608942 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ye8A/info/1ye8A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1y/1ye8A/nostruct-align/1ye8A.t06-thin90.a2m.gz, have 72087 columns in 303 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rliA/nostruct-align/1rliA.t06-thin90.a2m.gz
# 1rliA.t06-thin90.a2m with 1861 sequences, total weight= 1861 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.978106 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rliA/info/1rliA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rliA/nostruct-align/1rliA.t06-thin90.a2m.gz, have 72243 columns in 304 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t06-thin90.a2m.gz
# 1dosA.t06-thin90.a2m with 393 sequences, total weight= 49.8333 avg weight= 0.126802 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dosA/info/1dosA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t06-thin90.a2m.gz, have 72601 columns in 305 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fm0E/nostruct-align/1fm0E.t06-thin90.a2m.gz
# 1fm0E.t06-thin90.a2m with 284 sequences, total weight= 41.5755 avg weight= 0.146392 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30062 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fm0E/info/1fm0E.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fm0E/nostruct-align/1fm0E.t06-thin90.a2m.gz, have 72743 columns in 306 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iqzA/nostruct-align/1iqzA.t06-thin90.a2m.gz
# 1iqzA.t06-thin90.a2m with 323 sequences, total weight= 323 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23998 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iqzA/info/1iqzA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1i/1iqzA/nostruct-align/1iqzA.t06-thin90.a2m.gz, have 72824 columns in 307 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d7pM/nostruct-align/1d7pM.t06-thin90.a2m.gz
# 1d7pM.t06-thin90.a2m with 423 sequences, total weight= 91.4242 avg weight= 0.216133 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30301 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d7pM/info/1d7pM.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1d/1d7pM/nostruct-align/1d7pM.t06-thin90.a2m.gz, have 72983 columns in 308 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qwoA/nostruct-align/1qwoA.t06-thin90.a2m.gz
# 1qwoA.t06-thin90.a2m with 463 sequences, total weight= 463 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.937488 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qwoA/info/1qwoA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qwoA/nostruct-align/1qwoA.t06-thin90.a2m.gz, have 73418 columns in 309 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lst/nostruct-align/1lst.t06-thin90.a2m.gz
# 1lst.t06-thin90.a2m with 2998 sequences, total weight= 2998 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.950151 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lst/info/1lst.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lst/nostruct-align/1lst.t06-thin90.a2m.gz, have 73656 columns in 310 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hdkA/nostruct-align/1hdkA.t06-thin90.a2m.gz
# 1hdkA.t06-thin90.a2m with 346 sequences, total weight= 346 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28817 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hdkA/info/1hdkA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hdkA/nostruct-align/1hdkA.t06-thin90.a2m.gz, have 73795 columns in 311 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k1eA/nostruct-align/1k1eA.t06-thin90.a2m.gz
# 1k1eA.t06-thin90.a2m with 255 sequences, total weight= 160.426 avg weight= 0.629122 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30216 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k1eA/info/1k1eA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1k/1k1eA/nostruct-align/1k1eA.t06-thin90.a2m.gz, have 73972 columns in 312 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hft/nostruct-align/2hft.t06-thin90.a2m.gz
# 2hft.t06-thin90.a2m with 338 sequences, total weight= 338 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03702 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hft/info/2hft.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/2h/2hft/nostruct-align/2hft.t06-thin90.a2m.gz, have 74177 columns in 313 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bkf/nostruct-align/1bkf.t06-thin90.a2m.gz
# 1bkf.t06-thin90.a2m with 998 sequences, total weight= 94.0515 avg weight= 0.0942399 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30728 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bkf/info/1bkf.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1b/1bkf/nostruct-align/1bkf.t06-thin90.a2m.gz, have 74284 columns in 314 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m22A/nostruct-align/1m22A.t06-thin90.a2m.gz
# 1m22A.t06-thin90.a2m with 1342 sequences, total weight= 1233.2 avg weight= 0.918927 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30211 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m22A/info/1m22A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m22A/nostruct-align/1m22A.t06-thin90.a2m.gz, have 74771 columns in 315 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ew6A/nostruct-align/1ew6A.t06-thin90.a2m.gz
# 1ew6A.t06-thin90.a2m with 121 sequences, total weight= 121 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24306 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ew6A/info/1ew6A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1e/1ew6A/nostruct-align/1ew6A.t06-thin90.a2m.gz, have 74908 columns in 316 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nacA/nostruct-align/2nacA.t06-thin90.a2m.gz
# 2nacA.t06-thin90.a2m with 2261 sequences, total weight= 2261 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19607 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nacA/info/2nacA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/2n/2nacA/nostruct-align/2nacA.t06-thin90.a2m.gz, have 75282 columns in 317 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h97A/nostruct-align/1h97A.t06-thin90.a2m.gz
# 1h97A.t06-thin90.a2m with 270 sequences, total weight= 270 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25119 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h97A/info/1h97A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h97A/nostruct-align/1h97A.t06-thin90.a2m.gz, have 75429 columns in 318 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vd5A/nostruct-align/1vd5A.t06-thin90.a2m.gz
# 1vd5A.t06-thin90.a2m with 650 sequences, total weight= 650 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.842606 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vd5A/info/1vd5A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vd5A/nostruct-align/1vd5A.t06-thin90.a2m.gz, have 75806 columns in 319 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dp7P/nostruct-align/1dp7P.t06-thin90.a2m.gz
# 1dp7P.t06-thin90.a2m with 51 sequences, total weight= 10.5913 avg weight= 0.207672 31 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dp7P/info/1dp7P.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dp7P/nostruct-align/1dp7P.t06-thin90.a2m.gz, have 75882 columns in 320 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sj1A/nostruct-align/1sj1A.t06-thin90.a2m.gz
# 1sj1A.t06-thin90.a2m with 295 sequences, total weight= 81.022 avg weight= 0.274651 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30301 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sj1A/info/1sj1A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1s/1sj1A/nostruct-align/1sj1A.t06-thin90.a2m.gz, have 75948 columns in 321 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rz2A/nostruct-align/1rz2A.t06-thin90.a2m.gz
# 1rz2A.t06-thin90.a2m with 16 sequences, total weight= 12.1955 avg weight= 0.762216 23 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rz2A/info/1rz2A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rz2A/nostruct-align/1rz2A.t06-thin90.a2m.gz, have 76162 columns in 322 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tkeA/nostruct-align/1tkeA.t06-thin90.a2m.gz
# 1tkeA.t06-thin90.a2m with 960 sequences, total weight= 246.972 avg weight= 0.257263 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31426 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tkeA/info/1tkeA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tkeA/nostruct-align/1tkeA.t06-thin90.a2m.gz, have 76386 columns in 323 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rhs/nostruct-align/1rhs.t06-thin90.a2m.gz
# 1rhs.t06-thin90.a2m with 2064 sequences, total weight= 2064 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01341 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rhs/info/1rhs.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rhs/nostruct-align/1rhs.t06-thin90.a2m.gz, have 76679 columns in 324 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iooA/nostruct-align/1iooA.t06-thin90.a2m.gz
# 1iooA.t06-thin90.a2m with 611 sequences, total weight= 611 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29794 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iooA/info/1iooA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1i/1iooA/nostruct-align/1iooA.t06-thin90.a2m.gz, have 76875 columns in 325 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k3xA/nostruct-align/1k3xA.t06-thin90.a2m.gz
# 1k3xA.t06-thin90.a2m with 442 sequences, total weight= 67.8841 avg weight= 0.153584 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30234 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k3xA/info/1k3xA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1k/1k3xA/nostruct-align/1k3xA.t06-thin90.a2m.gz, have 77128 columns in 326 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rjoA/nostruct-align/1rjoA.t06-thin90.a2m.gz
# 1rjoA.t06-thin90.a2m with 172 sequences, total weight= 48.1399 avg weight= 0.279883 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rjoA/info/1rjoA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rjoA/nostruct-align/1rjoA.t06-thin90.a2m.gz, have 77748 columns in 327 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h75A/nostruct-align/1h75A.t06-thin90.a2m.gz
# 1h75A.t06-thin90.a2m with 1625 sequences, total weight= 1625 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24079 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h75A/info/1h75A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h75A/nostruct-align/1h75A.t06-thin90.a2m.gz, have 77824 columns in 328 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oqvA/nostruct-align/1oqvA.t06-thin90.a2m.gz
# 1oqvA.t06-thin90.a2m with 15 sequences, total weight= 5.4721 avg weight= 0.364807 19 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oqvA/info/1oqvA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oqvA/nostruct-align/1oqvA.t06-thin90.a2m.gz, have 77995 columns in 329 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w53A/nostruct-align/1w53A.t06-thin90.a2m.gz
# 1w53A.t06-thin90.a2m with 8 sequences, total weight= 4.16675 avg weight= 0.520844 15 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w53A/info/1w53A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w53A/nostruct-align/1w53A.t06-thin90.a2m.gz, have 78079 columns in 330 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n08A/nostruct-align/1n08A.t06-thin90.a2m.gz
# 1n08A.t06-thin90.a2m with 386 sequences, total weight= 56.6626 avg weight= 0.146794 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30117 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n08A/info/1n08A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1n/1n08A/nostruct-align/1n08A.t06-thin90.a2m.gz, have 78233 columns in 331 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uzbA/nostruct-align/1uzbA.t06-thin90.a2m.gz
# 1uzbA.t06-thin90.a2m with 4162 sequences, total weight= 4162 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26416 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uzbA/info/1uzbA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uzbA/nostruct-align/1uzbA.t06-thin90.a2m.gz, have 78749 columns in 332 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1isuA/nostruct-align/1isuA.t06-thin90.a2m.gz
# 1isuA.t06-thin90.a2m with 46 sequences, total weight= 15.4166 avg weight= 0.335143 32 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1isuA/info/1isuA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1i/1isuA/nostruct-align/1isuA.t06-thin90.a2m.gz, have 78811 columns in 333 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yc9A/nostruct-align/1yc9A.t06-thin90.a2m.gz
# 1yc9A.t06-thin90.a2m with 1805 sequences, total weight= 1805 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.977836 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yc9A/info/1yc9A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yc9A/nostruct-align/1yc9A.t06-thin90.a2m.gz, have 79222 columns in 334 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cl8A/nostruct-align/1cl8A.t06-thin90.a2m.gz
# 1cl8A.t06-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05471 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cl8A/info/1cl8A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1c/1cl8A/nostruct-align/1cl8A.t06-thin90.a2m.gz, have 79483 columns in 335 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qtwA/nostruct-align/1qtwA.t06-thin90.a2m.gz
# 1qtwA.t06-thin90.a2m with 1209 sequences, total weight= 1209 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.921909 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qtwA/info/1qtwA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qtwA/nostruct-align/1qtwA.t06-thin90.a2m.gz, have 79768 columns in 336 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uwcA/nostruct-align/1uwcA.t06-thin90.a2m.gz
# 1uwcA.t06-thin90.a2m with 1343 sequences, total weight= 1343 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.83521 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uwcA/info/1uwcA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uwcA/nostruct-align/1uwcA.t06-thin90.a2m.gz, have 80029 columns in 337 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o7jA/nostruct-align/1o7jA.t06-thin90.a2m.gz
# 1o7jA.t06-thin90.a2m with 353 sequences, total weight= 95.2381 avg weight= 0.269796 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30354 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o7jA/info/1o7jA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1o/1o7jA/nostruct-align/1o7jA.t06-thin90.a2m.gz, have 80354 columns in 338 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uvqA/nostruct-align/1uvqA.t06-thin90.a2m.gz
# 1uvqA.t06-thin90.a2m with 3022 sequences, total weight= 3022 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15061 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uvqA/info/1uvqA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uvqA/nostruct-align/1uvqA.t06-thin90.a2m.gz, have 80536 columns in 339 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lo7A/nostruct-align/1lo7A.t06-thin90.a2m.gz
# 1lo7A.t06-thin90.a2m with 1341 sequences, total weight= 1341 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.977081 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lo7A/info/1lo7A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lo7A/nostruct-align/1lo7A.t06-thin90.a2m.gz, have 80676 columns in 340 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xtyA/nostruct-align/1xtyA.t06-thin90.a2m.gz
# 1xtyA.t06-thin90.a2m with 120 sequences, total weight= 24.3114 avg weight= 0.202595 42 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xtyA/info/1xtyA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xtyA/nostruct-align/1xtyA.t06-thin90.a2m.gz, have 80796 columns in 341 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sg4A/nostruct-align/1sg4A.t06-thin90.a2m.gz
# 1sg4A.t06-thin90.a2m with 3014 sequences, total weight= 3014 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20137 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sg4A/info/1sg4A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1s/1sg4A/nostruct-align/1sg4A.t06-thin90.a2m.gz, have 81045 columns in 342 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1juvA/nostruct-align/1juvA.t06-thin90.a2m.gz
# 1juvA.t06-thin90.a2m with 568 sequences, total weight= 568 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21444 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1juvA/info/1juvA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1j/1juvA/nostruct-align/1juvA.t06-thin90.a2m.gz, have 81238 columns in 343 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d1qA/nostruct-align/1d1qA.t06-thin90.a2m.gz
# 1d1qA.t06-thin90.a2m with 752 sequences, total weight= 593.815 avg weight= 0.789648 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30478 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d1qA/info/1d1qA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1d/1d1qA/nostruct-align/1d1qA.t06-thin90.a2m.gz, have 81397 columns in 344 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e0cA/nostruct-align/1e0cA.t06-thin90.a2m.gz
# 1e0cA.t06-thin90.a2m with 2288 sequences, total weight= 2288 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.998632 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e0cA/info/1e0cA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1e/1e0cA/nostruct-align/1e0cA.t06-thin90.a2m.gz, have 81668 columns in 345 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qtnB/nostruct-align/1qtnB.t06-thin90.a2m.gz
# 1qtnB.t06-thin90.a2m with 169 sequences, total weight= 38.2499 avg weight= 0.226331 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qtnB/info/1qtnB.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qtnB/nostruct-align/1qtnB.t06-thin90.a2m.gz, have 81758 columns in 346 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n3lA/nostruct-align/1n3lA.t06-thin90.a2m.gz
# 1n3lA.t06-thin90.a2m with 1122 sequences, total weight= 1122 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15429 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n3lA/info/1n3lA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1n/1n3lA/nostruct-align/1n3lA.t06-thin90.a2m.gz, have 82090 columns in 347 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1us0A/nostruct-align/1us0A.t06-thin90.a2m.gz
# 1us0A.t06-thin90.a2m with 2643 sequences, total weight= 2643 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24832 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1us0A/info/1us0A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1u/1us0A/nostruct-align/1us0A.t06-thin90.a2m.gz, have 82403 columns in 348 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i0dA/nostruct-align/1i0dA.t06-thin90.a2m.gz
# 1i0dA.t06-thin90.a2m with 2168 sequences, total weight= 2168 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.871582 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i0dA/info/1i0dA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1i/1i0dA/nostruct-align/1i0dA.t06-thin90.a2m.gz, have 82734 columns in 349 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q7eA/nostruct-align/1q7eA.t06-thin90.a2m.gz
# 1q7eA.t06-thin90.a2m with 1038 sequences, total weight= 207.364 avg weight= 0.199773 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31441 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q7eA/info/1q7eA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1q/1q7eA/nostruct-align/1q7eA.t06-thin90.a2m.gz, have 83144 columns in 350 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1txgA/nostruct-align/1txgA.t06-thin90.a2m.gz
# 1txgA.t06-thin90.a2m with 5255 sequences, total weight= 5255 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.851344 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1txgA/info/1txgA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1t/1txgA/nostruct-align/1txgA.t06-thin90.a2m.gz, have 83479 columns in 351 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xkiA/nostruct-align/1xkiA.t06-thin90.a2m.gz
# 1xkiA.t06-thin90.a2m with 458 sequences, total weight= 458 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06881 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xkiA/info/1xkiA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xkiA/nostruct-align/1xkiA.t06-thin90.a2m.gz, have 83607 columns in 352 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nwaA/nostruct-align/1nwaA.t06-thin90.a2m.gz
# 1nwaA.t06-thin90.a2m with 593 sequences, total weight= 22.7815 avg weight= 0.0384173 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nwaA/info/1nwaA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nwaA/nostruct-align/1nwaA.t06-thin90.a2m.gz, have 83775 columns in 353 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wp5A/nostruct-align/1wp5A.t06-thin90.a2m.gz
# 1wp5A.t06-thin90.a2m with 527 sequences, total weight= 163.111 avg weight= 0.309508 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30821 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wp5A/info/1wp5A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wp5A/nostruct-align/1wp5A.t06-thin90.a2m.gz, have 84098 columns in 354 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r5lA/nostruct-align/1r5lA.t06-thin90.a2m.gz
# 1r5lA.t06-thin90.a2m with 672 sequences, total weight= 672 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.998433 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r5lA/info/1r5lA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r5lA/nostruct-align/1r5lA.t06-thin90.a2m.gz, have 84349 columns in 355 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rc9A/nostruct-align/1rc9A.t06-thin90.a2m.gz
# 1rc9A.t06-thin90.a2m with 657 sequences, total weight= 657 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22737 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rc9A/info/1rc9A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rc9A/nostruct-align/1rc9A.t06-thin90.a2m.gz, have 84570 columns in 356 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54E/nostruct-align/1v54E.t06-thin90.a2m.gz
# 1v54E.t06-thin90.a2m with 33 sequences, total weight= 5.33382 avg weight= 0.161631 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54E/info/1v54E.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v54E/nostruct-align/1v54E.t06-thin90.a2m.gz, have 84675 columns in 357 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1odzA/nostruct-align/1odzA.t06-thin90.a2m.gz
# 1odzA.t06-thin90.a2m with 151 sequences, total weight= 151 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.961778 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1odzA/info/1odzA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1o/1odzA/nostruct-align/1odzA.t06-thin90.a2m.gz, have 85054 columns in 358 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kw3B/nostruct-align/1kw3B.t06-thin90.a2m.gz
# 1kw3B.t06-thin90.a2m with 2358 sequences, total weight= 2358 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.955332 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kw3B/info/1kw3B.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kw3B/nostruct-align/1kw3B.t06-thin90.a2m.gz, have 85342 columns in 359 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ug6A/nostruct-align/1ug6A.t06-thin90.a2m.gz
# 1ug6A.t06-thin90.a2m with 815 sequences, total weight= 95.6627 avg weight= 0.117378 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30435 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ug6A/info/1ug6A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1u/1ug6A/nostruct-align/1ug6A.t06-thin90.a2m.gz, have 85768 columns in 360 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oi2A/nostruct-align/1oi2A.t06-thin90.a2m.gz
# 1oi2A.t06-thin90.a2m with 194 sequences, total weight= 17.1669 avg weight= 0.0884891 42 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oi2A/info/1oi2A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oi2A/nostruct-align/1oi2A.t06-thin90.a2m.gz, have 86104 columns in 361 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p5vA/nostruct-align/1p5vA.t06-thin90.a2m.gz
# 1p5vA.t06-thin90.a2m with 331 sequences, total weight= 224.604 avg weight= 0.678561 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30425 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p5vA/info/1p5vA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1p/1p5vA/nostruct-align/1p5vA.t06-thin90.a2m.gz, have 86295 columns in 362 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gudA/nostruct-align/1gudA.t06-thin90.a2m.gz
# 1gudA.t06-thin90.a2m with 624 sequences, total weight= 624 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.947007 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gudA/info/1gudA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gudA/nostruct-align/1gudA.t06-thin90.a2m.gz, have 86583 columns in 363 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cmcA/nostruct-align/1cmcA.t06-thin90.a2m.gz
# 1cmcA.t06-thin90.a2m with 18 sequences, total weight= 2.43404 avg weight= 0.135225 12 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cmcA/info/1cmcA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1c/1cmcA/nostruct-align/1cmcA.t06-thin90.a2m.gz, have 86687 columns in 364 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k7iA/nostruct-align/1k7iA.t06-thin90.a2m.gz
# 1k7iA.t06-thin90.a2m with 1798 sequences, total weight= 1798 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22608 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k7iA/info/1k7iA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1k/1k7iA/nostruct-align/1k7iA.t06-thin90.a2m.gz, have 87149 columns in 365 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a8o/nostruct-align/1a8o.t06-thin90.a2m.gz
# 1a8o.t06-thin90.a2m with 172 sequences, total weight= 12.4788 avg weight= 0.0725509 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a8o/info/1a8o.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1a/1a8o/nostruct-align/1a8o.t06-thin90.a2m.gz, have 87219 columns in 366 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o54A/nostruct-align/1o54A.t06-thin90.a2m.gz
# 1o54A.t06-thin90.a2m with 15548 sequences, total weight= 15548 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.690502 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o54A/info/1o54A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1o/1o54A/nostruct-align/1o54A.t06-thin90.a2m.gz, have 87484 columns in 367 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gxmA/nostruct-align/1gxmA.t06-thin90.a2m.gz
# 1gxmA.t06-thin90.a2m with 291 sequences, total weight= 291 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1724 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gxmA/info/1gxmA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gxmA/nostruct-align/1gxmA.t06-thin90.a2m.gz, have 87808 columns in 368 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fdn/nostruct-align/2fdn.t06-thin90.a2m.gz
# 2fdn.t06-thin90.a2m with 402 sequences, total weight= 21.8142 avg weight= 0.0542643 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30039 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fdn/info/2fdn.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/2f/2fdn/nostruct-align/2fdn.t06-thin90.a2m.gz, have 87863 columns in 369 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g55A/nostruct-align/1g55A.t06-thin90.a2m.gz
# 1g55A.t06-thin90.a2m with 685 sequences, total weight= 685 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06869 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g55A/info/1g55A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1g/1g55A/nostruct-align/1g55A.t06-thin90.a2m.gz, have 88176 columns in 370 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l6xA/nostruct-align/1l6xA.t06-thin90.a2m.gz
# 1l6xA.t06-thin90.a2m with 5631 sequences, total weight= 111.968 avg weight= 0.0198842 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3116 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l6xA/info/1l6xA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1l/1l6xA/nostruct-align/1l6xA.t06-thin90.a2m.gz, have 88383 columns in 371 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1smbA/nostruct-align/1smbA.t06-thin90.a2m.gz
# 1smbA.t06-thin90.a2m with 661 sequences, total weight= 661 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23322 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1smbA/info/1smbA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1s/1smbA/nostruct-align/1smbA.t06-thin90.a2m.gz, have 88532 columns in 372 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qjpA/nostruct-align/1qjpA.t06-thin90.a2m.gz
# 1qjpA.t06-thin90.a2m with 585 sequences, total weight= 585 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1959 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qjpA/info/1qjpA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qjpA/nostruct-align/1qjpA.t06-thin90.a2m.gz, have 88669 columns in 373 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wddA/nostruct-align/1wddA.t06-thin90.a2m.gz
# 1wddA.t06-thin90.a2m with 977 sequences, total weight= 22.1532 avg weight= 0.0226747 36 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wddA/info/1wddA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wddA/nostruct-align/1wddA.t06-thin90.a2m.gz, have 89134 columns in 374 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ufyA/nostruct-align/1ufyA.t06-thin90.a2m.gz
# 1ufyA.t06-thin90.a2m with 59 sequences, total weight= 7.43478 avg weight= 0.126013 30 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ufyA/info/1ufyA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1u/1ufyA/nostruct-align/1ufyA.t06-thin90.a2m.gz, have 89255 columns in 375 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ouwA/nostruct-align/1ouwA.t06-thin90.a2m.gz
# 1ouwA.t06-thin90.a2m with 275 sequences, total weight= 124.78 avg weight= 0.453746 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30269 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ouwA/info/1ouwA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1o/1ouwA/nostruct-align/1ouwA.t06-thin90.a2m.gz, have 89404 columns in 376 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oksA/nostruct-align/1oksA.t06-thin90.a2m.gz
# 1oksA.t06-thin90.a2m with 5 sequences, total weight= 3.01005 avg weight= 0.60201 9 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oksA/info/1oksA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oksA/nostruct-align/1oksA.t06-thin90.a2m.gz, have 89457 columns in 377 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mk0A/nostruct-align/1mk0A.t06-thin90.a2m.gz
# 1mk0A.t06-thin90.a2m with 74 sequences, total weight= 74 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27476 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mk0A/info/1mk0A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mk0A/nostruct-align/1mk0A.t06-thin90.a2m.gz, have 89554 columns in 378 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nnfA/nostruct-align/1nnfA.t06-thin90.a2m.gz
# 1nnfA.t06-thin90.a2m with 2960 sequences, total weight= 2960 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.840711 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nnfA/info/1nnfA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nnfA/nostruct-align/1nnfA.t06-thin90.a2m.gz, have 89862 columns in 379 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ummA/nostruct-align/1ummA.t06-thin90.a2m.gz
# 1ummA.t06-thin90.a2m with 2555 sequences, total weight= 2555 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.960519 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ummA/info/1ummA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1u/1ummA/nostruct-align/1ummA.t06-thin90.a2m.gz, have 90011 columns in 380 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2arcA/nostruct-align/2arcA.t06-thin90.a2m.gz
# 2arcA.t06-thin90.a2m with 36 sequences, total weight= 36 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06271 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2arcA/info/2arcA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/2a/2arcA/nostruct-align/2arcA.t06-thin90.a2m.gz, have 90172 columns in 381 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v05A/nostruct-align/1v05A.t06-thin90.a2m.gz
# 1v05A.t06-thin90.a2m with 753 sequences, total weight= 337.247 avg weight= 0.447871 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31291 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v05A/info/1v05A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v05A/nostruct-align/1v05A.t06-thin90.a2m.gz, have 90268 columns in 382 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u0fA/nostruct-align/1u0fA.t06-thin90.a2m.gz
# 1u0fA.t06-thin90.a2m with 513 sequences, total weight= 68.2237 avg weight= 0.13299 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30077 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u0fA/info/1u0fA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1u/1u0fA/nostruct-align/1u0fA.t06-thin90.a2m.gz, have 90824 columns in 383 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nfp/nostruct-align/1nfp.t06-thin90.a2m.gz
# 1nfp.t06-thin90.a2m with 510 sequences, total weight= 510 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12538 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nfp/info/1nfp.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nfp/nostruct-align/1nfp.t06-thin90.a2m.gz, have 91052 columns in 384 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gppA/nostruct-align/1gppA.t06-thin90.a2m.gz
# 1gppA.t06-thin90.a2m with 57 sequences, total weight= 57 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2516 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gppA/info/1gppA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gppA/nostruct-align/1gppA.t06-thin90.a2m.gz, have 91269 columns in 385 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i88A/nostruct-align/1i88A.t06-thin90.a2m.gz
# 1i88A.t06-thin90.a2m with 1184 sequences, total weight= 1184 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1385 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i88A/info/1i88A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1i/1i88A/nostruct-align/1i88A.t06-thin90.a2m.gz, have 91658 columns in 386 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3c/3cla/nostruct-align/3cla.t06-thin90.a2m.gz
# 3cla.t06-thin90.a2m with 848 sequences, total weight= 252.592 avg weight= 0.297868 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31483 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3c/3cla/info/3cla.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/3c/3cla/nostruct-align/3cla.t06-thin90.a2m.gz, have 91871 columns in 387 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iyhA/nostruct-align/1iyhA.t06-thin90.a2m.gz
# 1iyhA.t06-thin90.a2m with 3515 sequences, total weight= 3515 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01243 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iyhA/info/1iyhA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1i/1iyhA/nostruct-align/1iyhA.t06-thin90.a2m.gz, have 92069 columns in 388 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qgeE/nostruct-align/1qgeE.t06-thin90.a2m.gz
# 1qgeE.t06-thin90.a2m with 50 sequences, total weight= 7.56602 avg weight= 0.15132 26 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qgeE/info/1qgeE.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qgeE/nostruct-align/1qgeE.t06-thin90.a2m.gz, have 92166 columns in 389 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eca/nostruct-align/1eca.t06-thin90.a2m.gz
# 1eca.t06-thin90.a2m with 1049 sequences, total weight= 1049 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24872 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eca/info/1eca.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1e/1eca/nostruct-align/1eca.t06-thin90.a2m.gz, have 92302 columns in 390 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p1mA/nostruct-align/1p1mA.t06-thin90.a2m.gz
# 1p1mA.t06-thin90.a2m with 3318 sequences, total weight= 3318 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.87649 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p1mA/info/1p1mA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1p/1p1mA/nostruct-align/1p1mA.t06-thin90.a2m.gz, have 92706 columns in 391 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54F/nostruct-align/1v54F.t06-thin90.a2m.gz
# 1v54F.t06-thin90.a2m with 53 sequences, total weight= 17.0692 avg weight= 0.32206 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54F/info/1v54F.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v54F/nostruct-align/1v54F.t06-thin90.a2m.gz, have 92804 columns in 392 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kqwA/nostruct-align/1kqwA.t06-thin90.a2m.gz
# 1kqwA.t06-thin90.a2m with 313 sequences, total weight= 55.1441 avg weight= 0.176179 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kqwA/info/1kqwA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kqwA/nostruct-align/1kqwA.t06-thin90.a2m.gz, have 92938 columns in 393 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v5iB/nostruct-align/1v5iB.t06-thin90.a2m.gz
# 1v5iB.t06-thin90.a2m with 26 sequences, total weight= 12.761 avg weight= 0.490809 28 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v5iB/info/1v5iB.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v5iB/nostruct-align/1v5iB.t06-thin90.a2m.gz, have 93014 columns in 394 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1erw/nostruct-align/1erw.t06-thin90.a2m.gz
# 1erw.t06-thin90.a2m with 4002 sequences, total weight= 4002 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05559 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1erw/info/1erw.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1e/1erw/nostruct-align/1erw.t06-thin90.a2m.gz, have 93119 columns in 395 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1in6A/nostruct-align/1in6A.t06-thin90.a2m.gz
# 1in6A.t06-thin90.a2m with 12513 sequences, total weight= 12513 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.891933 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1in6A/info/1in6A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1i/1in6A/nostruct-align/1in6A.t06-thin90.a2m.gz, have 93419 columns in 396 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p57A/nostruct-align/1p57A.t06-thin90.a2m.gz
# 1p57A.t06-thin90.a2m with 6 sequences, total weight= 2.79798 avg weight= 0.46633 10 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p57A/info/1p57A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1p/1p57A/nostruct-align/1p57A.t06-thin90.a2m.gz, have 93529 columns in 397 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jetA/nostruct-align/1jetA.t06-thin90.a2m.gz
# 1jetA.t06-thin90.a2m with 1961 sequences, total weight= 1961 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05276 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jetA/info/1jetA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jetA/nostruct-align/1jetA.t06-thin90.a2m.gz, have 94046 columns in 398 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gbs/nostruct-align/1gbs.t06-thin90.a2m.gz
# 1gbs.t06-thin90.a2m with 1037 sequences, total weight= 1037 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08084 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gbs/info/1gbs.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gbs/nostruct-align/1gbs.t06-thin90.a2m.gz, have 94231 columns in 399 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vlyA/nostruct-align/1vlyA.t06-thin90.a2m.gz
# 1vlyA.t06-thin90.a2m with 933 sequences, total weight= 933 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23841 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vlyA/info/1vlyA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vlyA/nostruct-align/1vlyA.t06-thin90.a2m.gz, have 94554 columns in 400 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vp8A/nostruct-align/1vp8A.t06-thin90.a2m.gz
# 1vp8A.t06-thin90.a2m with 15 sequences, total weight= 5.20419 avg weight= 0.346946 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vp8A/info/1vp8A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vp8A/nostruct-align/1vp8A.t06-thin90.a2m.gz, have 94744 columns in 401 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mqkH/nostruct-align/1mqkH.t06-thin90.a2m.gz
# 1mqkH.t06-thin90.a2m with 12609 sequences, total weight= 20.3917 avg weight= 0.00161724 45 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mqkH/info/1mqkH.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mqkH/nostruct-align/1mqkH.t06-thin90.a2m.gz, have 94867 columns in 402 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m7gA/nostruct-align/1m7gA.t06-thin90.a2m.gz
# 1m7gA.t06-thin90.a2m with 5405 sequences, total weight= 5405 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.886323 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m7gA/info/1m7gA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m7gA/nostruct-align/1m7gA.t06-thin90.a2m.gz, have 95075 columns in 403 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gkmA/nostruct-align/1gkmA.t06-thin90.a2m.gz
# 1gkmA.t06-thin90.a2m with 347 sequences, total weight= 34.805 avg weight= 0.100303 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gkmA/info/1gkmA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gkmA/nostruct-align/1gkmA.t06-thin90.a2m.gz, have 95584 columns in 404 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oi0A/nostruct-align/1oi0A.t06-thin90.a2m.gz
# 1oi0A.t06-thin90.a2m with 283 sequences, total weight= 283 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19343 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oi0A/info/1oi0A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oi0A/nostruct-align/1oi0A.t06-thin90.a2m.gz, have 95692 columns in 405 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tu9A/nostruct-align/1tu9A.t06-thin90.a2m.gz
# 1tu9A.t06-thin90.a2m with 748 sequences, total weight= 748 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16631 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tu9A/info/1tu9A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tu9A/nostruct-align/1tu9A.t06-thin90.a2m.gz, have 95823 columns in 406 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xzoA/nostruct-align/1xzoA.t06-thin90.a2m.gz
# 1xzoA.t06-thin90.a2m with 4073 sequences, total weight= 4073 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01719 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xzoA/info/1xzoA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xzoA/nostruct-align/1xzoA.t06-thin90.a2m.gz, have 95995 columns in 407 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yllA/nostruct-align/1yllA.t06-thin90.a2m.gz
# 1yllA.t06-thin90.a2m with 69 sequences, total weight= 59.7974 avg weight= 0.866629 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yllA/info/1yllA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1y/1yllA/nostruct-align/1yllA.t06-thin90.a2m.gz, have 96185 columns in 408 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xmzA/nostruct-align/1xmzA.t06-thin90.a2m.gz
# 1xmzA.t06-thin90.a2m with 89 sequences, total weight= 16.0112 avg weight= 0.179901 35 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xmzA/info/1xmzA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xmzA/nostruct-align/1xmzA.t06-thin90.a2m.gz, have 96409 columns in 409 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1aba/nostruct-align/1aba.t06-thin90.a2m.gz
# 1aba.t06-thin90.a2m with 834 sequences, total weight= 438.584 avg weight= 0.52588 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31045 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1aba/info/1aba.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1a/1aba/nostruct-align/1aba.t06-thin90.a2m.gz, have 96496 columns in 410 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i24A/nostruct-align/1i24A.t06-thin90.a2m.gz
# 1i24A.t06-thin90.a2m with 13040 sequences, total weight= 13040 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.882695 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i24A/info/1i24A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1i/1i24A/nostruct-align/1i24A.t06-thin90.a2m.gz, have 96888 columns in 411 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dk8A/nostruct-align/1dk8A.t06-thin90.a2m.gz
# 1dk8A.t06-thin90.a2m with 378 sequences, total weight= 378 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16995 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dk8A/info/1dk8A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dk8A/nostruct-align/1dk8A.t06-thin90.a2m.gz, have 97035 columns in 412 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gttA/nostruct-align/1gttA.t06-thin90.a2m.gz
# 1gttA.t06-thin90.a2m with 1061 sequences, total weight= 43.3041 avg weight= 0.0408144 37 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gttA/info/1gttA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gttA/nostruct-align/1gttA.t06-thin90.a2m.gz, have 97456 columns in 413 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eokA/nostruct-align/1eokA.t06-thin90.a2m.gz
# 1eokA.t06-thin90.a2m with 97 sequences, total weight= 97 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10013 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eokA/info/1eokA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1e/1eokA/nostruct-align/1eokA.t06-thin90.a2m.gz, have 97738 columns in 414 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m6kA/nostruct-align/1m6kA.t06-thin90.a2m.gz
# 1m6kA.t06-thin90.a2m with 2347 sequences, total weight= 2347 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09613 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m6kA/info/1m6kA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m6kA/nostruct-align/1m6kA.t06-thin90.a2m.gz, have 97988 columns in 415 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3l/3lzt/nostruct-align/3lzt.t06-thin90.a2m.gz
# 3lzt.t06-thin90.a2m with 191 sequences, total weight= 22.0972 avg weight= 0.115692 43 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3l/3lzt/info/3lzt.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/3l/3lzt/nostruct-align/3lzt.t06-thin90.a2m.gz, have 98117 columns in 416 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nrjA/nostruct-align/1nrjA.t06-thin90.a2m.gz
# 1nrjA.t06-thin90.a2m with 4 sequences, total weight= 3.96601 avg weight= 0.991502 9 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nrjA/info/1nrjA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nrjA/nostruct-align/1nrjA.t06-thin90.a2m.gz, have 98264 columns in 417 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bbkH/nostruct-align/2bbkH.t06-thin90.a2m.gz
# 2bbkH.t06-thin90.a2m with 6591 sequences, total weight= 6591 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.758137 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bbkH/info/2bbkH.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bbkH/nostruct-align/2bbkH.t06-thin90.a2m.gz, have 98619 columns in 418 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1ls1A/nostruct-align/1ls1A.t06-thin90.a2m.gz
# 1ls1A.t06-thin90.a2m with 2020 sequences, total weight= 2020 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05986 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1ls1A/info/1ls1A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1l/1ls1A/nostruct-align/1ls1A.t06-thin90.a2m.gz, have 98908 columns in 419 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hp1A/nostruct-align/1hp1A.t06-thin90.a2m.gz
# 1hp1A.t06-thin90.a2m with 1324 sequences, total weight= 1324 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.982152 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hp1A/info/1hp1A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hp1A/nostruct-align/1hp1A.t06-thin90.a2m.gz, have 99424 columns in 420 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x6iA/nostruct-align/1x6iA.t06-thin90.a2m.gz
# 1x6iA.t06-thin90.a2m with 180 sequences, total weight= 67.7434 avg weight= 0.376352 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30131 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x6iA/info/1x6iA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1x/1x6iA/nostruct-align/1x6iA.t06-thin90.a2m.gz, have 99513 columns in 421 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2t/2tgi/nostruct-align/2tgi.t06-thin90.a2m.gz
# 2tgi.t06-thin90.a2m with 410 sequences, total weight= 59.1391 avg weight= 0.144242 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30116 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2t/2tgi/info/2tgi.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/2t/2tgi/nostruct-align/2tgi.t06-thin90.a2m.gz, have 99625 columns in 422 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gqiA/nostruct-align/1gqiA.t06-thin90.a2m.gz
# 1gqiA.t06-thin90.a2m with 40 sequences, total weight= 16.4558 avg weight= 0.411394 28 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gqiA/info/1gqiA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gqiA/nostruct-align/1gqiA.t06-thin90.a2m.gz, have 100333 columns in 423 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gmiA/nostruct-align/1gmiA.t06-thin90.a2m.gz
# 1gmiA.t06-thin90.a2m with 2217 sequences, total weight= 2217 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00794 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gmiA/info/1gmiA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gmiA/nostruct-align/1gmiA.t06-thin90.a2m.gz, have 100468 columns in 424 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h12A/nostruct-align/1h12A.t06-thin90.a2m.gz
# 1h12A.t06-thin90.a2m with 101 sequences, total weight= 101 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h12A/info/1h12A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1h/1h12A/nostruct-align/1h12A.t06-thin90.a2m.gz, have 100872 columns in 425 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w8kA/nostruct-align/1w8kA.t06-thin90.a2m.gz
# 1w8kA.t06-thin90.a2m with 43 sequences, total weight= 15.5058 avg weight= 0.360599 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w8kA/info/1w8kA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w8kA/nostruct-align/1w8kA.t06-thin90.a2m.gz, have 101234 columns in 426 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jl0A/nostruct-align/1jl0A.t06-thin90.a2m.gz
# 1jl0A.t06-thin90.a2m with 105 sequences, total weight= 22.5805 avg weight= 0.215052 41 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jl0A/info/1jl0A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jl0A/nostruct-align/1jl0A.t06-thin90.a2m.gz, have 101544 columns in 427 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a92A/nostruct-align/1a92A.t06-thin90.a2m.gz
# 1a92A.t06-thin90.a2m with 26 sequences, total weight= 3.25279 avg weight= 0.125107 16 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a92A/info/1a92A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1a/1a92A/nostruct-align/1a92A.t06-thin90.a2m.gz, have 101594 columns in 428 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kqfC/nostruct-align/1kqfC.t06-thin90.a2m.gz
# 1kqfC.t06-thin90.a2m with 637 sequences, total weight= 637 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05472 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kqfC/info/1kqfC.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kqfC/nostruct-align/1kqfC.t06-thin90.a2m.gz, have 101810 columns in 429 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t6eX/nostruct-align/1t6eX.t06-thin90.a2m.gz
# 1t6eX.t06-thin90.a2m with 1110 sequences, total weight= 1110 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11532 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t6eX/info/1t6eX.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1t/1t6eX/nostruct-align/1t6eX.t06-thin90.a2m.gz, have 102172 columns in 430 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uuqA/nostruct-align/1uuqA.t06-thin90.a2m.gz
# 1uuqA.t06-thin90.a2m with 3172 sequences, total weight= 3172 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.833983 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uuqA/info/1uuqA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uuqA/nostruct-align/1uuqA.t06-thin90.a2m.gz, have 102582 columns in 431 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xkzA/nostruct-align/1xkzA.t06-thin90.a2m.gz
# 1xkzA.t06-thin90.a2m with 2202 sequences, total weight= 2202 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08059 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xkzA/info/1xkzA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xkzA/nostruct-align/1xkzA.t06-thin90.a2m.gz, have 102826 columns in 432 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dbxA/nostruct-align/1dbxA.t06-thin90.a2m.gz
# 1dbxA.t06-thin90.a2m with 609 sequences, total weight= 609 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22633 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dbxA/info/1dbxA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dbxA/nostruct-align/1dbxA.t06-thin90.a2m.gz, have 102978 columns in 433 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hq1A/nostruct-align/1hq1A.t06-thin90.a2m.gz
# 1hq1A.t06-thin90.a2m with 325 sequences, total weight= 13.3139 avg weight= 0.0409658 41 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hq1A/info/1hq1A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hq1A/nostruct-align/1hq1A.t06-thin90.a2m.gz, have 103054 columns in 434 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j31A/nostruct-align/1j31A.t06-thin90.a2m.gz
# 1j31A.t06-thin90.a2m with 1676 sequences, total weight= 1676 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1154 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j31A/info/1j31A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1j/1j31A/nostruct-align/1j31A.t06-thin90.a2m.gz, have 103316 columns in 435 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r6dA/nostruct-align/1r6dA.t06-thin90.a2m.gz
# 1r6dA.t06-thin90.a2m with 12035 sequences, total weight= 12035 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.931053 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r6dA/info/1r6dA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r6dA/nostruct-align/1r6dA.t06-thin90.a2m.gz, have 103638 columns in 436 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r29A/nostruct-align/1r29A.t06-thin90.a2m.gz
# 1r29A.t06-thin90.a2m with 1500 sequences, total weight= 1500 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14543 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r29A/info/1r29A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r29A/nostruct-align/1r29A.t06-thin90.a2m.gz, have 103760 columns in 437 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xg4A/nostruct-align/1xg4A.t06-thin90.a2m.gz
# 1xg4A.t06-thin90.a2m with 788 sequences, total weight= 510.26 avg weight= 0.647538 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30804 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xg4A/info/1xg4A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xg4A/nostruct-align/1xg4A.t06-thin90.a2m.gz, have 104047 columns in 438 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x9iA/nostruct-align/1x9iA.t06-thin90.a2m.gz
# 1x9iA.t06-thin90.a2m with 1959 sequences, total weight= 1959 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09034 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x9iA/info/1x9iA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1x/1x9iA/nostruct-align/1x9iA.t06-thin90.a2m.gz, have 104347 columns in 439 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xy7A/nostruct-align/1xy7A.t06-thin90.a2m.gz
# 1xy7A.t06-thin90.a2m with 3308 sequences, total weight= 3308 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.948264 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xy7A/info/1xy7A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xy7A/nostruct-align/1xy7A.t06-thin90.a2m.gz, have 104467 columns in 440 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gs9A/nostruct-align/1gs9A.t06-thin90.a2m.gz
# 1gs9A.t06-thin90.a2m with 75 sequences, total weight= 30.2794 avg weight= 0.403726 40 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gs9A/info/1gs9A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gs9A/nostruct-align/1gs9A.t06-thin90.a2m.gz, have 104611 columns in 441 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s5uA/nostruct-align/1s5uA.t06-thin90.a2m.gz
# 1s5uA.t06-thin90.a2m with 1372 sequences, total weight= 1372 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.980299 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s5uA/info/1s5uA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1s/1s5uA/nostruct-align/1s5uA.t06-thin90.a2m.gz, have 104740 columns in 442 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s3cA/nostruct-align/1s3cA.t06-thin90.a2m.gz
# 1s3cA.t06-thin90.a2m with 538 sequences, total weight= 367.715 avg weight= 0.683485 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30493 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s3cA/info/1s3cA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1s/1s3cA/nostruct-align/1s3cA.t06-thin90.a2m.gz, have 104878 columns in 443 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pjxA/nostruct-align/1pjxA.t06-thin90.a2m.gz
# 1pjxA.t06-thin90.a2m with 5527 sequences, total weight= 5527 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.696883 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pjxA/info/1pjxA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pjxA/nostruct-align/1pjxA.t06-thin90.a2m.gz, have 105192 columns in 444 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hyp/nostruct-align/1hyp.t06-thin90.a2m.gz
# 1hyp.t06-thin90.a2m with 90 sequences, total weight= 6.15574 avg weight= 0.0683971 31 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hyp/info/1hyp.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hyp/nostruct-align/1hyp.t06-thin90.a2m.gz, have 105267 columns in 445 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jndA/nostruct-align/1jndA.t06-thin90.a2m.gz
# 1jndA.t06-thin90.a2m with 1110 sequences, total weight= 1110 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09498 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jndA/info/1jndA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jndA/nostruct-align/1jndA.t06-thin90.a2m.gz, have 105667 columns in 446 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mj4A/nostruct-align/1mj4A.t06-thin90.a2m.gz
# 1mj4A.t06-thin90.a2m with 555 sequences, total weight= 63.8261 avg weight= 0.115002 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30409 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mj4A/info/1mj4A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mj4A/nostruct-align/1mj4A.t06-thin90.a2m.gz, have 105746 columns in 447 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vmeA/nostruct-align/1vmeA.t06-thin90.a2m.gz
# 1vmeA.t06-thin90.a2m with 4640 sequences, total weight= 4640 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.899767 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vmeA/info/1vmeA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vmeA/nostruct-align/1vmeA.t06-thin90.a2m.gz, have 106147 columns in 448 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vpjA/nostruct-align/1vpjA.t06-thin90.a2m.gz
# 1vpjA.t06-thin90.a2m with 178 sequences, total weight= 10.3882 avg weight= 0.0583607 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vpjA/info/1vpjA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vpjA/nostruct-align/1vpjA.t06-thin90.a2m.gz, have 106325 columns in 449 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bikB/nostruct-align/2bikB.t06-thin90.a2m.gz
# 2bikB.t06-thin90.a2m with 13090 sequences, total weight= 13090 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12384 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bikB/info/2bikB.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/2b/2bikB/nostruct-align/2bikB.t06-thin90.a2m.gz, have 106598 columns in 450 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mnnA/nostruct-align/1mnnA.t06-thin90.a2m.gz
# 1mnnA.t06-thin90.a2m with 61 sequences, total weight= 53.8977 avg weight= 0.883568 39 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mnnA/info/1mnnA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mnnA/nostruct-align/1mnnA.t06-thin90.a2m.gz, have 106888 columns in 451 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j5xA/nostruct-align/1j5xA.t06-thin90.a2m.gz
# 1j5xA.t06-thin90.a2m with 1308 sequences, total weight= 1308 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16161 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j5xA/info/1j5xA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1j/1j5xA/nostruct-align/1j5xA.t06-thin90.a2m.gz, have 107207 columns in 452 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bx7/nostruct-align/1bx7.t06-thin90.a2m.gz
# 1bx7.t06-thin90.a2m with 5 sequences, total weight= 2.54723 avg weight= 0.509447 14 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bx7/info/1bx7.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1b/1bx7/nostruct-align/1bx7.t06-thin90.a2m.gz, have 107258 columns in 453 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mdoA/nostruct-align/1mdoA.t06-thin90.a2m.gz
# 1mdoA.t06-thin90.a2m with 11907 sequences, total weight= 11907 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.854055 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mdoA/info/1mdoA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1m/1mdoA/nostruct-align/1mdoA.t06-thin90.a2m.gz, have 107623 columns in 454 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r9lA/nostruct-align/1r9lA.t06-thin90.a2m.gz
# 1r9lA.t06-thin90.a2m with 1313 sequences, total weight= 1313 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.925481 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r9lA/info/1r9lA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r9lA/nostruct-align/1r9lA.t06-thin90.a2m.gz, have 107932 columns in 455 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pp0A/nostruct-align/1pp0A.t06-thin90.a2m.gz
# 1pp0A.t06-thin90.a2m with 14 sequences, total weight= 7.04711 avg weight= 0.503365 18 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pp0A/info/1pp0A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pp0A/nostruct-align/1pp0A.t06-thin90.a2m.gz, have 108123 columns in 456 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r8sA/nostruct-align/1r8sA.t06-thin90.a2m.gz
# 1r8sA.t06-thin90.a2m with 7438 sequences, total weight= 7438 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06848 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r8sA/info/1r8sA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r8sA/nostruct-align/1r8sA.t06-thin90.a2m.gz, have 108283 columns in 457 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xvqA/nostruct-align/1xvqA.t06-thin90.a2m.gz
# 1xvqA.t06-thin90.a2m with 3433 sequences, total weight= 3433 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00997 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xvqA/info/1xvqA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xvqA/nostruct-align/1xvqA.t06-thin90.a2m.gz, have 108443 columns in 458 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kgsA/nostruct-align/1kgsA.t06-thin90.a2m.gz
# 1kgsA.t06-thin90.a2m with 11854 sequences, total weight= 11854 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15599 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kgsA/info/1kgsA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kgsA/nostruct-align/1kgsA.t06-thin90.a2m.gz, have 108662 columns in 459 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xyiA/nostruct-align/1xyiA.t06-thin90.a2m.gz
# 1xyiA.t06-thin90.a2m with 6 sequences, total weight= 2.34343 avg weight= 0.390572 7 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xyiA/info/1xyiA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xyiA/nostruct-align/1xyiA.t06-thin90.a2m.gz, have 108728 columns in 460 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ox0A/nostruct-align/1ox0A.t06-thin90.a2m.gz
# 1ox0A.t06-thin90.a2m with 3770 sequences, total weight= 2103.67 avg weight= 0.558002 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31705 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ox0A/info/1ox0A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1o/1ox0A/nostruct-align/1ox0A.t06-thin90.a2m.gz, have 109142 columns in 461 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o7nB/nostruct-align/1o7nB.t06-thin90.a2m.gz
# 1o7nB.t06-thin90.a2m with 260 sequences, total weight= 260 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16114 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o7nB/info/1o7nB.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1o/1o7nB/nostruct-align/1o7nB.t06-thin90.a2m.gz, have 109335 columns in 462 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2t/2tpsA/nostruct-align/2tpsA.t06-thin90.a2m.gz
# 2tpsA.t06-thin90.a2m with 3783 sequences, total weight= 3783 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.903715 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2t/2tpsA/info/2tpsA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/2t/2tpsA/nostruct-align/2tpsA.t06-thin90.a2m.gz, have 109561 columns in 463 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oqjA/nostruct-align/1oqjA.t06-thin90.a2m.gz
# 1oqjA.t06-thin90.a2m with 77 sequences, total weight= 20.7294 avg weight= 0.269213 36 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oqjA/info/1oqjA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oqjA/nostruct-align/1oqjA.t06-thin90.a2m.gz, have 109651 columns in 464 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rwrA/nostruct-align/1rwrA.t06-thin90.a2m.gz
# 1rwrA.t06-thin90.a2m with 117 sequences, total weight= 22.1637 avg weight= 0.189433 45 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rwrA/info/1rwrA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1r/1rwrA/nostruct-align/1rwrA.t06-thin90.a2m.gz, have 109948 columns in 465 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dbwA/nostruct-align/1dbwA.t06-thin90.a2m.gz
# 1dbwA.t06-thin90.a2m with 13603 sequences, total weight= 13603 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22947 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dbwA/info/1dbwA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dbwA/nostruct-align/1dbwA.t06-thin90.a2m.gz, have 110071 columns in 466 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jkxA/nostruct-align/1jkxA.t06-thin90.a2m.gz
# 1jkxA.t06-thin90.a2m with 1180 sequences, total weight= 1180 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29752 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jkxA/info/1jkxA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jkxA/nostruct-align/1jkxA.t06-thin90.a2m.gz, have 110280 columns in 467 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b5pA/nostruct-align/1b5pA.t06-thin90.a2m.gz
# 1b5pA.t06-thin90.a2m with 8158 sequences, total weight= 8158 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.911229 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b5pA/info/1b5pA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1b/1b5pA/nostruct-align/1b5pA.t06-thin90.a2m.gz, have 110662 columns in 468 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qkrA/nostruct-align/1qkrA.t06-thin90.a2m.gz
# 1qkrA.t06-thin90.a2m with 48 sequences, total weight= 18.7069 avg weight= 0.389727 27 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qkrA/info/1qkrA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qkrA/nostruct-align/1qkrA.t06-thin90.a2m.gz, have 110843 columns in 469 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m45A/nostruct-align/1m45A.t06-thin90.a2m.gz
# 1m45A.t06-thin90.a2m with 2298 sequences, total weight= 2298 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07618 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m45A/info/1m45A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m45A/nostruct-align/1m45A.t06-thin90.a2m.gz, have 110985 columns in 470 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ui0A/nostruct-align/1ui0A.t06-thin90.a2m.gz
# 1ui0A.t06-thin90.a2m with 483 sequences, total weight= 483 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26093 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ui0A/info/1ui0A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1u/1ui0A/nostruct-align/1ui0A.t06-thin90.a2m.gz, have 111177 columns in 471 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oxxK/nostruct-align/1oxxK.t06-thin90.a2m.gz
# 1oxxK.t06-thin90.a2m with 18322 sequences, total weight= 18322 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10959 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oxxK/info/1oxxK.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oxxK/nostruct-align/1oxxK.t06-thin90.a2m.gz, have 111529 columns in 472 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a6m/nostruct-align/1a6m.t06-thin90.a2m.gz
# 1a6m.t06-thin90.a2m with 897 sequences, total weight= 897 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28543 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a6m/info/1a6m.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1a/1a6m/nostruct-align/1a6m.t06-thin90.a2m.gz, have 111680 columns in 473 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cnv/nostruct-align/1cnv.t06-thin90.a2m.gz
# 1cnv.t06-thin90.a2m with 1207 sequences, total weight= 1207 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05608 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cnv/info/1cnv.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1c/1cnv/nostruct-align/1cnv.t06-thin90.a2m.gz, have 111963 columns in 474 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lycA/nostruct-align/1lycA.t06-thin90.a2m.gz
# 1lycA.t06-thin90.a2m with 1064 sequences, total weight= 123.458 avg weight= 0.116032 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30371 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lycA/info/1lycA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lycA/nostruct-align/1lycA.t06-thin90.a2m.gz, have 112299 columns in 475 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ewfA/nostruct-align/1ewfA.t06-thin90.a2m.gz
# 1ewfA.t06-thin90.a2m with 161 sequences, total weight= 161 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05674 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ewfA/info/1ewfA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1e/1ewfA/nostruct-align/1ewfA.t06-thin90.a2m.gz, have 112755 columns in 476 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dypA/nostruct-align/1dypA.t06-thin90.a2m.gz
# 1dypA.t06-thin90.a2m with 642 sequences, total weight= 642 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07952 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dypA/info/1dypA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dypA/nostruct-align/1dypA.t06-thin90.a2m.gz, have 113026 columns in 477 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r6wA/nostruct-align/1r6wA.t06-thin90.a2m.gz
# 1r6wA.t06-thin90.a2m with 1387 sequences, total weight= 1387 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16663 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r6wA/info/1r6wA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r6wA/nostruct-align/1r6wA.t06-thin90.a2m.gz, have 113347 columns in 478 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u9cA/nostruct-align/1u9cA.t06-thin90.a2m.gz
# 1u9cA.t06-thin90.a2m with 1211 sequences, total weight= 1211 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14954 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u9cA/info/1u9cA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1u/1u9cA/nostruct-align/1u9cA.t06-thin90.a2m.gz, have 113568 columns in 479 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y0kA/nostruct-align/1y0kA.t06-thin90.a2m.gz
# 1y0kA.t06-thin90.a2m with 4 sequences, total weight= 2.08018 avg weight= 0.520046 8 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y0kA/info/1y0kA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1y/1y0kA/nostruct-align/1y0kA.t06-thin90.a2m.gz, have 113748 columns in 480 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kptA/nostruct-align/1kptA.t06-thin90.a2m.gz
# 1kptA.t06-thin90.a2m with 9 sequences, total weight= 4.40111 avg weight= 0.489012 17 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kptA/info/1kptA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kptA/nostruct-align/1kptA.t06-thin90.a2m.gz, have 113853 columns in 481 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nvmB/nostruct-align/1nvmB.t06-thin90.a2m.gz
# 1nvmB.t06-thin90.a2m with 1510 sequences, total weight= 1510 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15817 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nvmB/info/1nvmB.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nvmB/nostruct-align/1nvmB.t06-thin90.a2m.gz, have 114165 columns in 482 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t5bA/nostruct-align/1t5bA.t06-thin90.a2m.gz
# 1t5bA.t06-thin90.a2m with 1705 sequences, total weight= 1705 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.961135 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t5bA/info/1t5bA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1t/1t5bA/nostruct-align/1t5bA.t06-thin90.a2m.gz, have 114364 columns in 483 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tw6A/nostruct-align/1tw6A.t06-thin90.a2m.gz
# 1tw6A.t06-thin90.a2m with 318 sequences, total weight= 115.866 avg weight= 0.364359 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30446 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tw6A/info/1tw6A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tw6A/nostruct-align/1tw6A.t06-thin90.a2m.gz, have 114454 columns in 484 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u55A/nostruct-align/1u55A.t06-thin90.a2m.gz
# 1u55A.t06-thin90.a2m with 119 sequences, total weight= 119 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23005 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u55A/info/1u55A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1u/1u55A/nostruct-align/1u55A.t06-thin90.a2m.gz, have 114642 columns in 485 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gheA/nostruct-align/1gheA.t06-thin90.a2m.gz
# 1gheA.t06-thin90.a2m with 8056 sequences, total weight= 8056 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.743003 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gheA/info/1gheA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gheA/nostruct-align/1gheA.t06-thin90.a2m.gz, have 114812 columns in 486 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1smxA/nostruct-align/1smxA.t06-thin90.a2m.gz
# 1smxA.t06-thin90.a2m with 235 sequences, total weight= 10.1375 avg weight= 0.0431382 38 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1smxA/info/1smxA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1s/1smxA/nostruct-align/1smxA.t06-thin90.a2m.gz, have 114899 columns in 487 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pqhA/nostruct-align/1pqhA.t06-thin90.a2m.gz
# 1pqhA.t06-thin90.a2m with 154 sequences, total weight= 8.58212 avg weight= 0.0557281 31 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pqhA/info/1pqhA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pqhA/nostruct-align/1pqhA.t06-thin90.a2m.gz, have 115018 columns in 488 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jfuA/nostruct-align/1jfuA.t06-thin90.a2m.gz
# 1jfuA.t06-thin90.a2m with 5585 sequences, total weight= 5585 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.887961 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jfuA/info/1jfuA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jfuA/nostruct-align/1jfuA.t06-thin90.a2m.gz, have 115194 columns in 489 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w9aA/nostruct-align/1w9aA.t06-thin90.a2m.gz
# 1w9aA.t06-thin90.a2m with 1037 sequences, total weight= 1037 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.893847 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w9aA/info/1w9aA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1w/1w9aA/nostruct-align/1w9aA.t06-thin90.a2m.gz, have 115336 columns in 490 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l6rA/nostruct-align/1l6rA.t06-thin90.a2m.gz
# 1l6rA.t06-thin90.a2m with 5499 sequences, total weight= 5499 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.899312 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l6rA/info/1l6rA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1l/1l6rA/nostruct-align/1l6rA.t06-thin90.a2m.gz, have 115561 columns in 491 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r6xA/nostruct-align/1r6xA.t06-thin90.a2m.gz
# 1r6xA.t06-thin90.a2m with 180 sequences, total weight= 27.1734 avg weight= 0.150963 43 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r6xA/info/1r6xA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1r/1r6xA/nostruct-align/1r6xA.t06-thin90.a2m.gz, have 115947 columns in 492 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qtnA/nostruct-align/1qtnA.t06-thin90.a2m.gz
# 1qtnA.t06-thin90.a2m with 235 sequences, total weight= 61.6831 avg weight= 0.262481 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30099 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qtnA/info/1qtnA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qtnA/nostruct-align/1qtnA.t06-thin90.a2m.gz, have 116099 columns in 493 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wu9A/nostruct-align/1wu9A.t06-thin90.a2m.gz
# 1wu9A.t06-thin90.a2m with 54 sequences, total weight= 7.55136 avg weight= 0.13984 28 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wu9A/info/1wu9A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wu9A/nostruct-align/1wu9A.t06-thin90.a2m.gz, have 116158 columns in 494 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fs1B/nostruct-align/1fs1B.t06-thin90.a2m.gz
# 1fs1B.t06-thin90.a2m with 203 sequences, total weight= 53.2836 avg weight= 0.262481 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fs1B/info/1fs1B.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fs1B/nostruct-align/1fs1B.t06-thin90.a2m.gz, have 116274 columns in 495 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jl1A/nostruct-align/1jl1A.t06-thin90.a2m.gz
# 1jl1A.t06-thin90.a2m with 1205 sequences, total weight= 1205 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15233 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jl1A/info/1jl1A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jl1A/nostruct-align/1jl1A.t06-thin90.a2m.gz, have 116426 columns in 496 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hm9A/nostruct-align/1hm9A.t06-thin90.a2m.gz
# 1hm9A.t06-thin90.a2m with 4672 sequences, total weight= 4672 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05557 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hm9A/info/1hm9A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hm9A/nostruct-align/1hm9A.t06-thin90.a2m.gz, have 116884 columns in 497 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oboA/nostruct-align/1oboA.t06-thin90.a2m.gz
# 1oboA.t06-thin90.a2m with 1394 sequences, total weight= 1394 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01635 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oboA/info/1oboA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1o/1oboA/nostruct-align/1oboA.t06-thin90.a2m.gz, have 117053 columns in 498 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qwnA/nostruct-align/1qwnA.t06-thin90.a2m.gz
# 1qwnA.t06-thin90.a2m with 300 sequences, total weight= 300 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09056 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qwnA/info/1qwnA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qwnA/nostruct-align/1qwnA.t06-thin90.a2m.gz, have 118067 columns in 499 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gqnA/nostruct-align/1gqnA.t06-thin90.a2m.gz
# 1gqnA.t06-thin90.a2m with 149 sequences, total weight= 149 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2678 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gqnA/info/1gqnA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gqnA/nostruct-align/1gqnA.t06-thin90.a2m.gz, have 118319 columns in 500 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iuqA/nostruct-align/1iuqA.t06-thin90.a2m.gz
# 1iuqA.t06-thin90.a2m with 1553 sequences, total weight= 1553 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.902583 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iuqA/info/1iuqA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1i/1iuqA/nostruct-align/1iuqA.t06-thin90.a2m.gz, have 118676 columns in 501 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v6pA/nostruct-align/1v6pA.t06-thin90.a2m.gz
# 1v6pA.t06-thin90.a2m with 170 sequences, total weight= 18.7809 avg weight= 0.110476 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v6pA/info/1v6pA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v6pA/nostruct-align/1v6pA.t06-thin90.a2m.gz, have 118738 columns in 502 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1azo/nostruct-align/1azo.t06-thin90.a2m.gz
# 1azo.t06-thin90.a2m with 62 sequences, total weight= 40.5812 avg weight= 0.654535 44 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1azo/info/1azo.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1a/1azo/nostruct-align/1azo.t06-thin90.a2m.gz, have 118952 columns in 503 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cy5A/nostruct-align/1cy5A.t06-thin90.a2m.gz
# 1cy5A.t06-thin90.a2m with 10 sequences, total weight= 3.45596 avg weight= 0.345596 12 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cy5A/info/1cy5A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1c/1cy5A/nostruct-align/1cy5A.t06-thin90.a2m.gz, have 119044 columns in 504 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v2zA/nostruct-align/1v2zA.t06-thin90.a2m.gz
# 1v2zA.t06-thin90.a2m with 20 sequences, total weight= 3.81023 avg weight= 0.190512 17 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v2zA/info/1v2zA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v2zA/nostruct-align/1v2zA.t06-thin90.a2m.gz, have 119150 columns in 505 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m4lA/nostruct-align/1m4lA.t06-thin90.a2m.gz
# 1m4lA.t06-thin90.a2m with 926 sequences, total weight= 926 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04003 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m4lA/info/1m4lA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1m/1m4lA/nostruct-align/1m4lA.t06-thin90.a2m.gz, have 119457 columns in 506 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gu7A/nostruct-align/1gu7A.t06-thin90.a2m.gz
# 1gu7A.t06-thin90.a2m with 4959 sequences, total weight= 4959 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09179 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gu7A/info/1gu7A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gu7A/nostruct-align/1gu7A.t06-thin90.a2m.gz, have 119821 columns in 507 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ogoX/nostruct-align/1ogoX.t06-thin90.a2m.gz
# 1ogoX.t06-thin90.a2m with 77 sequences, total weight= 53.0206 avg weight= 0.688579 33 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ogoX/info/1ogoX.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1o/1ogoX/nostruct-align/1ogoX.t06-thin90.a2m.gz, have 120393 columns in 508 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ryaA/nostruct-align/1ryaA.t06-thin90.a2m.gz
# 1ryaA.t06-thin90.a2m with 3617 sequences, total weight= 3617 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.829684 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ryaA/info/1ryaA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1r/1ryaA/nostruct-align/1ryaA.t06-thin90.a2m.gz, have 120553 columns in 509 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q0rA/nostruct-align/1q0rA.t06-thin90.a2m.gz
# 1q0rA.t06-thin90.a2m with 10032 sequences, total weight= 10032 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.654213 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q0rA/info/1q0rA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1q/1q0rA/nostruct-align/1q0rA.t06-thin90.a2m.gz, have 120850 columns in 510 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fr2A/nostruct-align/1fr2A.t06-thin90.a2m.gz
# 1fr2A.t06-thin90.a2m with 32 sequences, total weight= 6.12043 avg weight= 0.191263 25 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fr2A/info/1fr2A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1f/1fr2A/nostruct-align/1fr2A.t06-thin90.a2m.gz, have 120933 columns in 511 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e29A/nostruct-align/1e29A.t06-thin90.a2m.gz
# 1e29A.t06-thin90.a2m with 833 sequences, total weight= 833 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0376 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e29A/info/1e29A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1e/1e29A/nostruct-align/1e29A.t06-thin90.a2m.gz, have 121068 columns in 512 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gveA/nostruct-align/1gveA.t06-thin90.a2m.gz
# 1gveA.t06-thin90.a2m with 2577 sequences, total weight= 2577 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23051 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gveA/info/1gveA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gveA/nostruct-align/1gveA.t06-thin90.a2m.gz, have 121392 columns in 513 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k3iA/nostruct-align/1k3iA.t06-thin90.a2m.gz
# 1k3iA.t06-thin90.a2m with 2439 sequences, total weight= 2439 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22979 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k3iA/info/1k3iA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1k/1k3iA/nostruct-align/1k3iA.t06-thin90.a2m.gz, have 122043 columns in 514 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g2nA/nostruct-align/1g2nA.t06-thin90.a2m.gz
# 1g2nA.t06-thin90.a2m with 1209 sequences, total weight= 1209 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.896372 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g2nA/info/1g2nA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1g/1g2nA/nostruct-align/1g2nA.t06-thin90.a2m.gz, have 122289 columns in 515 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uuyA/nostruct-align/1uuyA.t06-thin90.a2m.gz
# 1uuyA.t06-thin90.a2m with 1042 sequences, total weight= 884.069 avg weight= 0.848434 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30374 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uuyA/info/1uuyA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uuyA/nostruct-align/1uuyA.t06-thin90.a2m.gz, have 122450 columns in 516 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jo8A/nostruct-align/1jo8A.t06-thin90.a2m.gz
# 1jo8A.t06-thin90.a2m with 1552 sequences, total weight= 114.546 avg weight= 0.0738056 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32408 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jo8A/info/1jo8A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jo8A/nostruct-align/1jo8A.t06-thin90.a2m.gz, have 122508 columns in 517 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pz7A/nostruct-align/1pz7A.t06-thin90.a2m.gz
# 1pz7A.t06-thin90.a2m with 1405 sequences, total weight= 1405 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.860278 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pz7A/info/1pz7A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pz7A/nostruct-align/1pz7A.t06-thin90.a2m.gz, have 122696 columns in 518 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n8kA/nostruct-align/1n8kA.t06-thin90.a2m.gz
# 1n8kA.t06-thin90.a2m with 4865 sequences, total weight= 4865 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16019 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n8kA/info/1n8kA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1n/1n8kA/nostruct-align/1n8kA.t06-thin90.a2m.gz, have 123070 columns in 519 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jx4A/nostruct-align/1jx4A.t06-thin90.a2m.gz
# 1jx4A.t06-thin90.a2m with 827 sequences, total weight= 827 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.266 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jx4A/info/1jx4A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jx4A/nostruct-align/1jx4A.t06-thin90.a2m.gz, have 123411 columns in 520 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e87A/nostruct-align/1e87A.t06-thin90.a2m.gz
# 1e87A.t06-thin90.a2m with 2253 sequences, total weight= 2253 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06526 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e87A/info/1e87A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1e/1e87A/nostruct-align/1e87A.t06-thin90.a2m.gz, have 123528 columns in 521 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kjqA/nostruct-align/1kjqA.t06-thin90.a2m.gz
# 1kjqA.t06-thin90.a2m with 3833 sequences, total weight= 3833 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0531 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kjqA/info/1kjqA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kjqA/nostruct-align/1kjqA.t06-thin90.a2m.gz, have 123916 columns in 522 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jsdA/nostruct-align/1jsdA.t06-thin90.a2m.gz
# 1jsdA.t06-thin90.a2m with 174 sequences, total weight= 10.5377 avg weight= 0.0605612 29 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jsdA/info/1jsdA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jsdA/nostruct-align/1jsdA.t06-thin90.a2m.gz, have 124233 columns in 523 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1it2A/nostruct-align/1it2A.t06-thin90.a2m.gz
# 1it2A.t06-thin90.a2m with 836 sequences, total weight= 836 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28269 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1it2A/info/1it2A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1i/1it2A/nostruct-align/1it2A.t06-thin90.a2m.gz, have 124379 columns in 524 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qb7A/nostruct-align/1qb7A.t06-thin90.a2m.gz
# 1qb7A.t06-thin90.a2m with 2936 sequences, total weight= 2936 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.93133 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qb7A/info/1qb7A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qb7A/nostruct-align/1qb7A.t06-thin90.a2m.gz, have 124615 columns in 525 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vbwA/nostruct-align/1vbwA.t06-thin90.a2m.gz
# 1vbwA.t06-thin90.a2m with 83 sequences, total weight= 15.5609 avg weight= 0.187481 34 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vbwA/info/1vbwA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vbwA/nostruct-align/1vbwA.t06-thin90.a2m.gz, have 124683 columns in 526 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ubkS/nostruct-align/1ubkS.t06-thin90.a2m.gz
# 1ubkS.t06-thin90.a2m with 477 sequences, total weight= 109.876 avg weight= 0.230348 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30189 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ubkS/info/1ubkS.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1u/1ubkS/nostruct-align/1ubkS.t06-thin90.a2m.gz, have 124950 columns in 527 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jykA/nostruct-align/1jykA.t06-thin90.a2m.gz
# 1jykA.t06-thin90.a2m with 3566 sequences, total weight= 3566 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04773 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jykA/info/1jykA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jykA/nostruct-align/1jykA.t06-thin90.a2m.gz, have 125179 columns in 528 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uv4A/nostruct-align/1uv4A.t06-thin90.a2m.gz
# 1uv4A.t06-thin90.a2m with 984 sequences, total weight= 984 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.973268 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uv4A/info/1uv4A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1u/1uv4A/nostruct-align/1uv4A.t06-thin90.a2m.gz, have 125470 columns in 529 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o4yA/nostruct-align/1o4yA.t06-thin90.a2m.gz
# 1o4yA.t06-thin90.a2m with 651 sequences, total weight= 651 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07921 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o4yA/info/1o4yA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1o/1o4yA/nostruct-align/1o4yA.t06-thin90.a2m.gz, have 125740 columns in 530 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pkoA/nostruct-align/1pkoA.t06-thin90.a2m.gz
# 1pkoA.t06-thin90.a2m with 10124 sequences, total weight= 10124 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1687 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pkoA/info/1pkoA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pkoA/nostruct-align/1pkoA.t06-thin90.a2m.gz, have 125864 columns in 531 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1urrA/nostruct-align/1urrA.t06-thin90.a2m.gz
# 1urrA.t06-thin90.a2m with 417 sequences, total weight= 70.3487 avg weight= 0.168702 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30508 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1urrA/info/1urrA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1u/1urrA/nostruct-align/1urrA.t06-thin90.a2m.gz, have 125961 columns in 532 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x7yB/nostruct-align/1x7yB.t06-thin90.a2m.gz
# 1x7yB.t06-thin90.a2m with 1902 sequences, total weight= 1902 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27096 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x7yB/info/1x7yB.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1x/1x7yB/nostruct-align/1x7yB.t06-thin90.a2m.gz, have 126290 columns in 533 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kveA/nostruct-align/1kveA.t06-thin90.a2m.gz
# 1kveA.t06-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.697962 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kveA/info/1kveA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kveA/nostruct-align/1kveA.t06-thin90.a2m.gz, have 126353 columns in 534 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kp6A/nostruct-align/1kp6A.t06-thin90.a2m.gz
# 1kp6A.t06-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.617161 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kp6A/info/1kp6A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kp6A/nostruct-align/1kp6A.t06-thin90.a2m.gz, have 126432 columns in 535 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e5kA/nostruct-align/1e5kA.t06-thin90.a2m.gz
# 1e5kA.t06-thin90.a2m with 3737 sequences, total weight= 3737 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04502 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e5kA/info/1e5kA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1e/1e5kA/nostruct-align/1e5kA.t06-thin90.a2m.gz, have 126620 columns in 536 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eajA/nostruct-align/1eajA.t06-thin90.a2m.gz
# 1eajA.t06-thin90.a2m with 11309 sequences, total weight= 41.9922 avg weight= 0.00371316 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3006 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eajA/info/1eajA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1e/1eajA/nostruct-align/1eajA.t06-thin90.a2m.gz, have 126744 columns in 537 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lzlA/nostruct-align/1lzlA.t06-thin90.a2m.gz
# 1lzlA.t06-thin90.a2m with 8159 sequences, total weight= 8159 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.779348 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lzlA/info/1lzlA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lzlA/nostruct-align/1lzlA.t06-thin90.a2m.gz, have 127061 columns in 538 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jo0A/nostruct-align/1jo0A.t06-thin90.a2m.gz
# 1jo0A.t06-thin90.a2m with 155 sequences, total weight= 23.3416 avg weight= 0.150591 44 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jo0A/info/1jo0A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jo0A/nostruct-align/1jo0A.t06-thin90.a2m.gz, have 127158 columns in 539 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sqeA/nostruct-align/1sqeA.t06-thin90.a2m.gz
# 1sqeA.t06-thin90.a2m with 318 sequences, total weight= 318 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0596 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sqeA/info/1sqeA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1s/1sqeA/nostruct-align/1sqeA.t06-thin90.a2m.gz, have 127259 columns in 540 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pgs/nostruct-align/1pgs.t06-thin90.a2m.gz
# 1pgs.t06-thin90.a2m with 7 sequences, total weight= 7 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17523 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pgs/info/1pgs.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pgs/nostruct-align/1pgs.t06-thin90.a2m.gz, have 127570 columns in 541 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jb3A/nostruct-align/1jb3A.t06-thin90.a2m.gz
# 1jb3A.t06-thin90.a2m with 6 sequences, total weight= 2.61003 avg weight= 0.435006 8 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jb3A/info/1jb3A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jb3A/nostruct-align/1jb3A.t06-thin90.a2m.gz, have 127697 columns in 542 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k07A/nostruct-align/1k07A.t06-thin90.a2m.gz
# 1k07A.t06-thin90.a2m with 4641 sequences, total weight= 4641 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.783066 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k07A/info/1k07A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1k/1k07A/nostruct-align/1k07A.t06-thin90.a2m.gz, have 127959 columns in 543 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vhqA/nostruct-align/1vhqA.t06-thin90.a2m.gz
# 1vhqA.t06-thin90.a2m with 1050 sequences, total weight= 1050 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16711 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vhqA/info/1vhqA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vhqA/nostruct-align/1vhqA.t06-thin90.a2m.gz, have 128176 columns in 544 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xkpB/nostruct-align/1xkpB.t06-thin90.a2m.gz
# 1xkpB.t06-thin90.a2m with 13 sequences, total weight= 8.66941 avg weight= 0.666877 20 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xkpB/info/1xkpB.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xkpB/nostruct-align/1xkpB.t06-thin90.a2m.gz, have 128297 columns in 545 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nkpA/nostruct-align/1nkpA.t06-thin90.a2m.gz
# 1nkpA.t06-thin90.a2m with 225 sequences, total weight= 68.4612 avg weight= 0.304272 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30219 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nkpA/info/1nkpA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1n/1nkpA/nostruct-align/1nkpA.t06-thin90.a2m.gz, have 128385 columns in 546 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1od3A/nostruct-align/1od3A.t06-thin90.a2m.gz
# 1od3A.t06-thin90.a2m with 193 sequences, total weight= 121.386 avg weight= 0.628944 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30143 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1od3A/info/1od3A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1o/1od3A/nostruct-align/1od3A.t06-thin90.a2m.gz, have 128516 columns in 547 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xjuA/nostruct-align/1xjuA.t06-thin90.a2m.gz
# 1xjuA.t06-thin90.a2m with 199 sequences, total weight= 194.131 avg weight= 0.975533 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xjuA/info/1xjuA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1x/1xjuA/nostruct-align/1xjuA.t06-thin90.a2m.gz, have 128672 columns in 548 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2biqA/nostruct-align/2biqA.t06-thin90.a2m.gz
# 2biqA.t06-thin90.a2m with 76 sequences, total weight= 12.902 avg weight= 0.169763 28 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2biqA/info/2biqA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/2b/2biqA/nostruct-align/2biqA.t06-thin90.a2m.gz, have 128857 columns in 549 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vyiA/nostruct-align/1vyiA.t06-thin90.a2m.gz
# 1vyiA.t06-thin90.a2m with 18 sequences, total weight= 2.74254 avg weight= 0.152363 12 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vyiA/info/1vyiA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1vyiA/nostruct-align/1vyiA.t06-thin90.a2m.gz, have 128968 columns in 550 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iw0A/nostruct-align/1iw0A.t06-thin90.a2m.gz
# 1iw0A.t06-thin90.a2m with 205 sequences, total weight= 205 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1613 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iw0A/info/1iw0A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1i/1iw0A/nostruct-align/1iw0A.t06-thin90.a2m.gz, have 129175 columns in 551 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e1hB/nostruct-align/1e1hB.t06-thin90.a2m.gz
# 1e1hB.t06-thin90.a2m with 12 sequences, total weight= 6.10569 avg weight= 0.508808 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e1hB/info/1e1hB.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1e/1e1hB/nostruct-align/1e1hB.t06-thin90.a2m.gz, have 129339 columns in 552 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iibA/nostruct-align/1iibA.t06-thin90.a2m.gz
# 1iibA.t06-thin90.a2m with 156 sequences, total weight= 35.2359 avg weight= 0.225871 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iibA/info/1iibA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1i/1iibA/nostruct-align/1iibA.t06-thin90.a2m.gz, have 129442 columns in 553 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dcs/nostruct-align/1dcs.t06-thin90.a2m.gz
# 1dcs.t06-thin90.a2m with 1001 sequences, total weight= 1001 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26225 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dcs/info/1dcs.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dcs/nostruct-align/1dcs.t06-thin90.a2m.gz, have 129721 columns in 554 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tuaA/nostruct-align/1tuaA.t06-thin90.a2m.gz
# 1tuaA.t06-thin90.a2m with 116 sequences, total weight= 32.438 avg weight= 0.279638 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tuaA/info/1tuaA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1t/1tuaA/nostruct-align/1tuaA.t06-thin90.a2m.gz, have 129910 columns in 555 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eu1A/nostruct-align/1eu1A.t06-thin90.a2m.gz
# 1eu1A.t06-thin90.a2m with 1619 sequences, total weight= 1619 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1303 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eu1A/info/1eu1A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1e/1eu1A/nostruct-align/1eu1A.t06-thin90.a2m.gz, have 130677 columns in 556 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s1fA/nostruct-align/1s1fA.t06-thin90.a2m.gz
# 1s1fA.t06-thin90.a2m with 5670 sequences, total weight= 5670 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01477 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s1fA/info/1s1fA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1s/1s1fA/nostruct-align/1s1fA.t06-thin90.a2m.gz, have 131074 columns in 557 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sfdA/nostruct-align/1sfdA.t06-thin90.a2m.gz
# 1sfdA.t06-thin90.a2m with 985 sequences, total weight= 985 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02045 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sfdA/info/1sfdA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1s/1sfdA/nostruct-align/1sfdA.t06-thin90.a2m.gz, have 131179 columns in 558 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kr7A/nostruct-align/1kr7A.t06-thin90.a2m.gz
# 1kr7A.t06-thin90.a2m with 5 sequences, total weight= 3.76694 avg weight= 0.753387 12 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kr7A/info/1kr7A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kr7A/nostruct-align/1kr7A.t06-thin90.a2m.gz, have 131289 columns in 559 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hx6A/nostruct-align/1hx6A.t06-thin90.a2m.gz
# 1hx6A.t06-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.583138 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hx6A/info/1hx6A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1h/1hx6A/nostruct-align/1hx6A.t06-thin90.a2m.gz, have 131659 columns in 560 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i12A/nostruct-align/1i12A.t06-thin90.a2m.gz
# 1i12A.t06-thin90.a2m with 7909 sequences, total weight= 7909 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.747681 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i12A/info/1i12A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1i/1i12A/nostruct-align/1i12A.t06-thin90.a2m.gz, have 131813 columns in 561 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1szhA/nostruct-align/1szhA.t06-thin90.a2m.gz
# 1szhA.t06-thin90.a2m with 5 sequences, total weight= 3.58609 avg weight= 0.717219 12 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1szhA/info/1szhA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1s/1szhA/nostruct-align/1szhA.t06-thin90.a2m.gz, have 131960 columns in 562 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lqaA/nostruct-align/1lqaA.t06-thin90.a2m.gz
# 1lqaA.t06-thin90.a2m with 2640 sequences, total weight= 2640 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22665 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lqaA/info/1lqaA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lqaA/nostruct-align/1lqaA.t06-thin90.a2m.gz, have 132306 columns in 563 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pcfA/nostruct-align/1pcfA.t06-thin90.a2m.gz
# 1pcfA.t06-thin90.a2m with 48 sequences, total weight= 12.2138 avg weight= 0.254455 35 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pcfA/info/1pcfA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1p/1pcfA/nostruct-align/1pcfA.t06-thin90.a2m.gz, have 132372 columns in 564 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d3vA/nostruct-align/1d3vA.t06-thin90.a2m.gz
# 1d3vA.t06-thin90.a2m with 583 sequences, total weight= 583 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21411 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d3vA/info/1d3vA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1d/1d3vA/nostruct-align/1d3vA.t06-thin90.a2m.gz, have 132680 columns in 565 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eyhA/nostruct-align/1eyhA.t06-thin90.a2m.gz
# 1eyhA.t06-thin90.a2m with 121 sequences, total weight= 30.3979 avg weight= 0.251222 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eyhA/info/1eyhA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1e/1eyhA/nostruct-align/1eyhA.t06-thin90.a2m.gz, have 132824 columns in 566 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1aqzA/nostruct-align/1aqzA.t06-thin90.a2m.gz
# 1aqzA.t06-thin90.a2m with 6 sequences, total weight= 2.99208 avg weight= 0.498681 12 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1aqzA/info/1aqzA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1a/1aqzA/nostruct-align/1aqzA.t06-thin90.a2m.gz, have 132966 columns in 567 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k94A/nostruct-align/1k94A.t06-thin90.a2m.gz
# 1k94A.t06-thin90.a2m with 2292 sequences, total weight= 2292 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00576 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k94A/info/1k94A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1k/1k94A/nostruct-align/1k94A.t06-thin90.a2m.gz, have 133131 columns in 568 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k7jA/nostruct-align/1k7jA.t06-thin90.a2m.gz
# 1k7jA.t06-thin90.a2m with 719 sequences, total weight= 183.735 avg weight= 0.255542 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3147 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k7jA/info/1k7jA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1k/1k7jA/nostruct-align/1k7jA.t06-thin90.a2m.gz, have 133337 columns in 569 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gqzA/nostruct-align/1gqzA.t06-thin90.a2m.gz
# 1gqzA.t06-thin90.a2m with 795 sequences, total weight= 795 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19055 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gqzA/info/1gqzA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gqzA/nostruct-align/1gqzA.t06-thin90.a2m.gz, have 133611 columns in 570 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jakA/nostruct-align/1jakA.t06-thin90.a2m.gz
# 1jakA.t06-thin90.a2m with 378 sequences, total weight= 378 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08855 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jakA/info/1jakA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jakA/nostruct-align/1jakA.t06-thin90.a2m.gz, have 134110 columns in 571 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gxuA/nostruct-align/1gxuA.t06-thin90.a2m.gz
# 1gxuA.t06-thin90.a2m with 415 sequences, total weight= 55.9869 avg weight= 0.134908 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30227 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gxuA/info/1gxuA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gxuA/nostruct-align/1gxuA.t06-thin90.a2m.gz, have 134198 columns in 572 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v7zA/nostruct-align/1v7zA.t06-thin90.a2m.gz
# 1v7zA.t06-thin90.a2m with 156 sequences, total weight= 117.386 avg weight= 0.752472 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30072 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v7zA/info/1v7zA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v7zA/nostruct-align/1v7zA.t06-thin90.a2m.gz, have 134455 columns in 573 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jixA/nostruct-align/1jixA.t06-thin90.a2m.gz
# 1jixA.t06-thin90.a2m with 38 sequences, total weight= 38 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.975714 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jixA/info/1jixA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1j/1jixA/nostruct-align/1jixA.t06-thin90.a2m.gz, have 134806 columns in 574 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v37A/nostruct-align/1v37A.t06-thin90.a2m.gz
# 1v37A.t06-thin90.a2m with 1780 sequences, total weight= 1780 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0421 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v37A/info/1v37A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1v/1v37A/nostruct-align/1v37A.t06-thin90.a2m.gz, have 134977 columns in 575 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lbu/nostruct-align/1lbu.t06-thin90.a2m.gz
# 1lbu.t06-thin90.a2m with 515 sequences, total weight= 515 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06811 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lbu/info/1lbu.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lbu/nostruct-align/1lbu.t06-thin90.a2m.gz, have 135190 columns in 576 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qd1A/nostruct-align/1qd1A.t06-thin90.a2m.gz
# 1qd1A.t06-thin90.a2m with 52 sequences, total weight= 13.4249 avg weight= 0.258172 30 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qd1A/info/1qd1A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1q/1qd1A/nostruct-align/1qd1A.t06-thin90.a2m.gz, have 135509 columns in 577 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ezwA/nostruct-align/1ezwA.t06-thin90.a2m.gz
# 1ezwA.t06-thin90.a2m with 1356 sequences, total weight= 1356 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10487 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ezwA/info/1ezwA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1e/1ezwA/nostruct-align/1ezwA.t06-thin90.a2m.gz, have 135856 columns in 578 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t6uA/nostruct-align/1t6uA.t06-thin90.a2m.gz
# 1t6uA.t06-thin90.a2m with 23 sequences, total weight= 6.67042 avg weight= 0.290018 22 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t6uA/info/1t6uA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1t/1t6uA/nostruct-align/1t6uA.t06-thin90.a2m.gz, have 135973 columns in 579 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ekqA/nostruct-align/1ekqA.t06-thin90.a2m.gz
# 1ekqA.t06-thin90.a2m with 2204 sequences, total weight= 2204 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.968197 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ekqA/info/1ekqA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1e/1ekqA/nostruct-align/1ekqA.t06-thin90.a2m.gz, have 136227 columns in 580 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kxoA/nostruct-align/1kxoA.t06-thin90.a2m.gz
# 1kxoA.t06-thin90.a2m with 583 sequences, total weight= 583 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.958201 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kxoA/info/1kxoA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1k/1kxoA/nostruct-align/1kxoA.t06-thin90.a2m.gz, have 136392 columns in 581 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lriA/nostruct-align/1lriA.t06-thin90.a2m.gz
# 1lriA.t06-thin90.a2m with 82 sequences, total weight= 19.0306 avg weight= 0.23208 35 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lriA/info/1lriA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lriA/nostruct-align/1lriA.t06-thin90.a2m.gz, have 136490 columns in 582 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lvmA/nostruct-align/1lvmA.t06-thin90.a2m.gz
# 1lvmA.t06-thin90.a2m with 511 sequences, total weight= 511 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11469 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lvmA/info/1lvmA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1l/1lvmA/nostruct-align/1lvmA.t06-thin90.a2m.gz, have 136719 columns in 583 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1ta8A/nostruct-align/1ta8A.t06-thin90.a2m.gz
# 1ta8A.t06-thin90.a2m with 407 sequences, total weight= 28.3247 avg weight= 0.0695939 46 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1ta8A/info/1ta8A.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1t/1ta8A/nostruct-align/1ta8A.t06-thin90.a2m.gz, have 137032 columns in 584 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gwyA/nostruct-align/1gwyA.t06-thin90.a2m.gz
# 1gwyA.t06-thin90.a2m with 20 sequences, total weight= 9.54821 avg weight= 0.47741 21 iterations
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gwyA/info/1gwyA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1g/1gwyA/nostruct-align/1gwyA.t06-thin90.a2m.gz, have 137207 columns in 585 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dzkA/nostruct-align/1dzkA.t06-thin90.a2m.gz
# 1dzkA.t06-thin90.a2m with 327 sequences, total weight= 327 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03801 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dzkA/info/1dzkA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1d/1dzkA/nostruct-align/1dzkA.t06-thin90.a2m.gz, have 137355 columns in 586 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wkcA/nostruct-align/1wkcA.t06-thin90.a2m.gz
# 1wkcA.t06-thin90.a2m with 431 sequences, total weight= 270.74 avg weight= 0.628166 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3061 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wkcA/info/1wkcA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1w/1wkcA/nostruct-align/1wkcA.t06-thin90.a2m.gz, have 137523 columns in 587 chains
# Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d5tA/nostruct-align/1d5tA.t06-thin90.a2m.gz
# 1d5tA.t06-thin90.a2m with 6849 sequences, total weight= 6849 avg weight= 1 clipped 46 iterations
# AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.718206 bits.
# Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d5tA/info/1d5tA.stride-mixed.str2
# After reading /projects/compbio/experiments/models.97/pdb/1d/1d5tA/nostruct-align/1d5tA.t06-thin90.a2m.gz, have 137956 columns in 588 chains
# command:CPU_time= 4055.63 sec, elapsed time= 4086.97 sec)
# command:# ReportTestByChain quality-reports/dunbrack-30pc-1763-t06-thin90-IDGaaH13-3-13-7-13-9-13-11-tr31-str2-by-chain.test ok.
# command:# Testing net dunbrack-30pc-1763-t06-thin90-IDGaaH13-3-13-7-13-9-13-11-tr31-str2-from-empty.net
# Initializing Gain for str2
# Initializing Gain for third_layer
# Initializing Gain for second_layer
# Initializing Gain for FirstLayer
# Network initialization done
# command:CPU_time= 4105.32 sec, elapsed time= 4136.74 sec)
# command: