# command:# Prefix for input files set to # command:# Prefix for output files set to # command:# Seed set to 1173998240 # command:# Read 2 alphabets and 0 BackgroundProbs from /projects/compbio/lib/alphabet/str.alphabet # command:Unrecognized 1th alphabet way-back-11 for BackgroundProbs that has no name Unrecognized 1th alphabet near-backbone-11 for BackgroundProbs that has no name Unrecognized 1th alphabet rel_sa10 for BackgroundProbs that has no name Unrecognized 1th alphabet CB_burial_12_7 for BackgroundProbs that has no name Unrecognized 1th alphabet CB_burial_14_7 for BackgroundProbs that has no name Unrecognized 1th alphabet abs_sa7 for BackgroundProbs that has no name Unrecognized 1th alphabet alpha11 for BackgroundProbs that has no name Unrecognized 1th alphabet Bystroff for BackgroundProbs that has no name Unrecognized 1th alphabet chi1_3 for BackgroundProbs that has no name Unrecognized 1th alphabet dry_burial_6.5_7 for BackgroundProbs that has no name Unrecognized 1th alphabet dry_burial_8_7 for BackgroundProbs that has no name Unrecognized 1th alphabet dry_burial_12_7 for BackgroundProbs that has no name Unrecognized 1th alphabet DSSP for BackgroundProbs that has no name Unrecognized 1th alphabet EBGHSTL for BackgroundProbs that has no name Unrecognized 1th alphabet dssp_ehl2 for BackgroundProbs that has no name Unrecognized 1th alphabet STRIDE for BackgroundProbs that has no name Unrecognized 1th alphabet EBGHTL for BackgroundProbs that has no name Unrecognized 1th alphabet stride_ehl2 for BackgroundProbs that has no name Unrecognized 1th alphabet tco for BackgroundProbs that has no name Unrecognized 1th alphabet wet_burial_6.5_7 for BackgroundProbs that has no name Unrecognized 1th alphabet pb for BackgroundProbs that has no name Unrecognized 1th alphabet gamma_2 for BackgroundProbs that has no name Unrecognized 1th alphabet n_sep for BackgroundProbs that has no name Unrecognized 1th alphabet o_sep for BackgroundProbs that has no name Unrecognized 1th alphabet n_notor for BackgroundProbs that has no name Unrecognized 1th alphabet o_notor for BackgroundProbs that has no name Unrecognized 1th alphabet n_notor2 for BackgroundProbs that has no name Unrecognized 1th alphabet o_notor2 for BackgroundProbs that has no name # Read 0 alphabets and 3 BackgroundProbs from /projects/compbio/lib/alphabet/dunbrack-in-scop.backgrounds # command:CPU_time= 0.003 sec, elapsed time= 0.022812 sec) # command:# Neural network set to dunbrack-30pc-1763-t06-thin90-IDGaaH13-3-13-7-13-9-13-11-tr23-str2-from-empty.net # command:# command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/predict-2nd/testing/training-data/ # command:# reading script from file dunbrack-30pc-1763-1.t06-thin90-str2 # Prefix for input files set to # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ed8A/nostruct-align/1ed8A.t06-thin90.a2m.gz # 1ed8A.t06-thin90.a2m with 1019 sequences, total weight= 1019 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03693 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ed8A/info/1ed8A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ed8A/nostruct-align/1ed8A.t06-thin90.a2m.gz, have 449 columns in 1 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gdm/nostruct-align/2gdm.t06-thin90.a2m.gz # 2gdm.t06-thin90.a2m with 1054 sequences, total weight= 1054 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17382 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gdm/info/2gdm.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/2g/2gdm/nostruct-align/2gdm.t06-thin90.a2m.gz, have 602 columns in 2 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iukA/nostruct-align/1iukA.t06-thin90.a2m.gz # 1iukA.t06-thin90.a2m with 515 sequences, total weight= 151.844 avg weight= 0.294842 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30714 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iukA/info/1iukA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iukA/nostruct-align/1iukA.t06-thin90.a2m.gz, have 738 columns in 3 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1senA/nostruct-align/1senA.t06-thin90.a2m.gz # 1senA.t06-thin90.a2m with 3566 sequences, total weight= 3566 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.962494 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1senA/info/1senA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1senA/nostruct-align/1senA.t06-thin90.a2m.gz, have 872 columns in 4 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rm6B/nostruct-align/1rm6B.t06-thin90.a2m.gz # 1rm6B.t06-thin90.a2m with 471 sequences, total weight= 129.145 avg weight= 0.274192 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30262 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rm6B/info/1rm6B.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rm6B/nostruct-align/1rm6B.t06-thin90.a2m.gz, have 1195 columns in 5 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jtvA/nostruct-align/1jtvA.t06-thin90.a2m.gz # 1jtvA.t06-thin90.a2m with 13890 sequences, total weight= 13890 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0157 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jtvA/info/1jtvA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jtvA/nostruct-align/1jtvA.t06-thin90.a2m.gz, have 1473 columns in 6 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g5aA/nostruct-align/1g5aA.t06-thin90.a2m.gz # 1g5aA.t06-thin90.a2m with 2451 sequences, total weight= 2451 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08418 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g5aA/info/1g5aA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g5aA/nostruct-align/1g5aA.t06-thin90.a2m.gz, have 2101 columns in 7 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ro0A/nostruct-align/1ro0A.t06-thin90.a2m.gz # 1ro0A.t06-thin90.a2m with 87 sequences, total weight= 87 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06249 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ro0A/info/1ro0A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1ro0A/nostruct-align/1ro0A.t06-thin90.a2m.gz, have 2311 columns in 8 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xg0C/nostruct-align/1xg0C.t06-thin90.a2m.gz # 1xg0C.t06-thin90.a2m with 317 sequences, total weight= 45.1868 avg weight= 0.142545 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xg0C/info/1xg0C.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xg0C/nostruct-align/1xg0C.t06-thin90.a2m.gz, have 2485 columns in 9 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k2eA/nostruct-align/1k2eA.t06-thin90.a2m.gz # 1k2eA.t06-thin90.a2m with 3420 sequences, total weight= 3420 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.852709 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k2eA/info/1k2eA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k2eA/nostruct-align/1k2eA.t06-thin90.a2m.gz, have 2637 columns in 10 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1km4A/nostruct-align/1km4A.t06-thin90.a2m.gz # 1km4A.t06-thin90.a2m with 1012 sequences, total weight= 1012 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23514 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1km4A/info/1km4A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1km4A/nostruct-align/1km4A.t06-thin90.a2m.gz, have 2849 columns in 11 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cex/nostruct-align/1cex.t06-thin90.a2m.gz # 1cex.t06-thin90.a2m with 520 sequences, total weight= 520 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.976616 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cex/info/1cex.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cex/nostruct-align/1cex.t06-thin90.a2m.gz, have 3046 columns in 12 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qqfA/nostruct-align/1qqfA.t06-thin90.a2m.gz # 1qqfA.t06-thin90.a2m with 592 sequences, total weight= 592 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14935 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qqfA/info/1qqfA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qqfA/nostruct-align/1qqfA.t06-thin90.a2m.gz, have 3323 columns in 13 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gd0A/nostruct-align/1gd0A.t06-thin90.a2m.gz # 1gd0A.t06-thin90.a2m with 134 sequences, total weight= 134 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27315 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gd0A/info/1gd0A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gd0A/nostruct-align/1gd0A.t06-thin90.a2m.gz, have 3441 columns in 14 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r77A/nostruct-align/1r77A.t06-thin90.a2m.gz # 1r77A.t06-thin90.a2m with 20 sequences, total weight= 10.5215 avg weight= 0.526073 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r77A/info/1r77A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r77A/nostruct-align/1r77A.t06-thin90.a2m.gz, have 3540 columns in 15 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x82A/nostruct-align/1x82A.t06-thin90.a2m.gz # 1x82A.t06-thin90.a2m with 1274 sequences, total weight= 1274 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.859938 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x82A/info/1x82A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1x82A/nostruct-align/1x82A.t06-thin90.a2m.gz, have 3730 columns in 16 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1atzA/nostruct-align/1atzA.t06-thin90.a2m.gz # 1atzA.t06-thin90.a2m with 1826 sequences, total weight= 1826 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02896 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1atzA/info/1atzA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1atzA/nostruct-align/1atzA.t06-thin90.a2m.gz, have 3914 columns in 17 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v9yA/nostruct-align/1v9yA.t06-thin90.a2m.gz # 1v9yA.t06-thin90.a2m with 7075 sequences, total weight= 7075 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27676 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v9yA/info/1v9yA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v9yA/nostruct-align/1v9yA.t06-thin90.a2m.gz, have 4017 columns in 18 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ocyA/nostruct-align/1ocyA.t06-thin90.a2m.gz # 1ocyA.t06-thin90.a2m with 209 sequences, total weight= 209 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.235 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ocyA/info/1ocyA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ocyA/nostruct-align/1ocyA.t06-thin90.a2m.gz, have 4215 columns in 19 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fobA/nostruct-align/1fobA.t06-thin90.a2m.gz # 1fobA.t06-thin90.a2m with 2194 sequences, total weight= 2194 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.821557 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fobA/info/1fobA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fobA/nostruct-align/1fobA.t06-thin90.a2m.gz, have 4549 columns in 20 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dwkA/nostruct-align/1dwkA.t06-thin90.a2m.gz # 1dwkA.t06-thin90.a2m with 79 sequences, total weight= 11.0813 avg weight= 0.14027 31 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dwkA/info/1dwkA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dwkA/nostruct-align/1dwkA.t06-thin90.a2m.gz, have 4705 columns in 21 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ugpB/nostruct-align/1ugpB.t06-thin90.a2m.gz # 1ugpB.t06-thin90.a2m with 74 sequences, total weight= 29.1606 avg weight= 0.394061 37 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ugpB/info/1ugpB.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ugpB/nostruct-align/1ugpB.t06-thin90.a2m.gz, have 4931 columns in 22 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ijbA/nostruct-align/1ijbA.t06-thin90.a2m.gz # 1ijbA.t06-thin90.a2m with 2261 sequences, total weight= 2261 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.935163 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ijbA/info/1ijbA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ijbA/nostruct-align/1ijbA.t06-thin90.a2m.gz, have 5133 columns in 23 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lqvA/nostruct-align/1lqvA.t06-thin90.a2m.gz # 1lqvA.t06-thin90.a2m with 472 sequences, total weight= 137.43 avg weight= 0.291164 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30099 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lqvA/info/1lqvA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lqvA/nostruct-align/1lqvA.t06-thin90.a2m.gz, have 5305 columns in 24 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xodA/nostruct-align/1xodA.t06-thin90.a2m.gz # 1xodA.t06-thin90.a2m with 66 sequences, total weight= 12.008 avg weight= 0.181939 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xodA/info/1xodA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xodA/nostruct-align/1xodA.t06-thin90.a2m.gz, have 5410 columns in 25 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cc8A/nostruct-align/1cc8A.t06-thin90.a2m.gz # 1cc8A.t06-thin90.a2m with 571 sequences, total weight= 98.1645 avg weight= 0.171917 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3107 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cc8A/info/1cc8A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cc8A/nostruct-align/1cc8A.t06-thin90.a2m.gz, have 5482 columns in 26 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wqjB/nostruct-align/1wqjB.t06-thin90.a2m.gz # 1wqjB.t06-thin90.a2m with 99 sequences, total weight= 23.8235 avg weight= 0.240642 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wqjB/info/1wqjB.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wqjB/nostruct-align/1wqjB.t06-thin90.a2m.gz, have 5562 columns in 27 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1on2A/nostruct-align/1on2A.t06-thin90.a2m.gz # 1on2A.t06-thin90.a2m with 633 sequences, total weight= 633 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03457 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1on2A/info/1on2A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1on2A/nostruct-align/1on2A.t06-thin90.a2m.gz, have 5697 columns in 28 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f3uA/nostruct-align/1f3uA.t06-thin90.a2m.gz # 1f3uA.t06-thin90.a2m with 38 sequences, total weight= 24.6711 avg weight= 0.649239 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f3uA/info/1f3uA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f3uA/nostruct-align/1f3uA.t06-thin90.a2m.gz, have 5815 columns in 29 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rqpA/nostruct-align/1rqpA.t06-thin90.a2m.gz # 1rqpA.t06-thin90.a2m with 105 sequences, total weight= 32.3629 avg weight= 0.308218 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rqpA/info/1rqpA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rqpA/nostruct-align/1rqpA.t06-thin90.a2m.gz, have 6106 columns in 30 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vpt/nostruct-align/1vpt.t06-thin90.a2m.gz # 1vpt.t06-thin90.a2m with 31 sequences, total weight= 14.506 avg weight= 0.467935 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vpt/info/1vpt.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vpt/nostruct-align/1vpt.t06-thin90.a2m.gz, have 6397 columns in 31 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p4cA/nostruct-align/1p4cA.t06-thin90.a2m.gz # 1p4cA.t06-thin90.a2m with 3082 sequences, total weight= 3082 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.98534 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p4cA/info/1p4cA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p4cA/nostruct-align/1p4cA.t06-thin90.a2m.gz, have 6750 columns in 32 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s5dA/nostruct-align/1s5dA.t06-thin90.a2m.gz # 1s5dA.t06-thin90.a2m with 37 sequences, total weight= 37 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27671 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s5dA/info/1s5dA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s5dA/nostruct-align/1s5dA.t06-thin90.a2m.gz, have 6968 columns in 33 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m40A/nostruct-align/1m40A.t06-thin90.a2m.gz # 1m40A.t06-thin90.a2m with 1008 sequences, total weight= 1008 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06189 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m40A/info/1m40A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m40A/nostruct-align/1m40A.t06-thin90.a2m.gz, have 7231 columns in 34 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p5fA/nostruct-align/1p5fA.t06-thin90.a2m.gz # 1p5fA.t06-thin90.a2m with 1583 sequences, total weight= 1583 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12897 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p5fA/info/1p5fA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p5fA/nostruct-align/1p5fA.t06-thin90.a2m.gz, have 7417 columns in 35 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a7s/nostruct-align/1a7s.t06-thin90.a2m.gz # 1a7s.t06-thin90.a2m with 3273 sequences, total weight= 2232.48 avg weight= 0.68209 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31186 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a7s/info/1a7s.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1a7s/nostruct-align/1a7s.t06-thin90.a2m.gz, have 7638 columns in 36 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i58A/nostruct-align/1i58A.t06-thin90.a2m.gz # 1i58A.t06-thin90.a2m with 9194 sequences, total weight= 9194 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19667 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i58A/info/1i58A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i58A/nostruct-align/1i58A.t06-thin90.a2m.gz, have 7827 columns in 37 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uujA/nostruct-align/1uujA.t06-thin90.a2m.gz # 1uujA.t06-thin90.a2m with 32 sequences, total weight= 9.32285 avg weight= 0.291339 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uujA/info/1uujA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uujA/nostruct-align/1uujA.t06-thin90.a2m.gz, have 7903 columns in 38 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v8yA/nostruct-align/1v8yA.t06-thin90.a2m.gz # 1v8yA.t06-thin90.a2m with 3451 sequences, total weight= 3451 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.846054 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v8yA/info/1v8yA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v8yA/nostruct-align/1v8yA.t06-thin90.a2m.gz, have 8053 columns in 39 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1usmA/nostruct-align/1usmA.t06-thin90.a2m.gz # 1usmA.t06-thin90.a2m with 269 sequences, total weight= 32.1943 avg weight= 0.119681 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1usmA/info/1usmA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1usmA/nostruct-align/1usmA.t06-thin90.a2m.gz, have 8130 columns in 40 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fr2B/nostruct-align/1fr2B.t06-thin90.a2m.gz # 1fr2B.t06-thin90.a2m with 28 sequences, total weight= 5.94812 avg weight= 0.212433 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fr2B/info/1fr2B.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fr2B/nostruct-align/1fr2B.t06-thin90.a2m.gz, have 8261 columns in 41 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d2vA/nostruct-align/1d2vA.t06-thin90.a2m.gz # 1d2vA.t06-thin90.a2m with 127 sequences, total weight= 28.4432 avg weight= 0.223962 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d2vA/info/1d2vA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d2vA/nostruct-align/1d2vA.t06-thin90.a2m.gz, have 8365 columns in 42 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dz3A/nostruct-align/1dz3A.t06-thin90.a2m.gz # 1dz3A.t06-thin90.a2m with 13417 sequences, total weight= 13417 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2446 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dz3A/info/1dz3A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dz3A/nostruct-align/1dz3A.t06-thin90.a2m.gz, have 8488 columns in 43 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o2dA/nostruct-align/1o2dA.t06-thin90.a2m.gz # 1o2dA.t06-thin90.a2m with 1352 sequences, total weight= 1352 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19044 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o2dA/info/1o2dA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o2dA/nostruct-align/1o2dA.t06-thin90.a2m.gz, have 8847 columns in 44 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qu9A/nostruct-align/1qu9A.t06-thin90.a2m.gz # 1qu9A.t06-thin90.a2m with 1124 sequences, total weight= 578.303 avg weight= 0.514504 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31447 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qu9A/info/1qu9A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qu9A/nostruct-align/1qu9A.t06-thin90.a2m.gz, have 8974 columns in 45 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rqwA/nostruct-align/1rqwA.t06-thin90.a2m.gz # 1rqwA.t06-thin90.a2m with 218 sequences, total weight= 23.9766 avg weight= 0.109984 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rqwA/info/1rqwA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rqwA/nostruct-align/1rqwA.t06-thin90.a2m.gz, have 9181 columns in 46 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m9xC/nostruct-align/1m9xC.t06-thin90.a2m.gz # 1m9xC.t06-thin90.a2m with 275 sequences, total weight= 12.9966 avg weight= 0.0472603 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m9xC/info/1m9xC.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m9xC/nostruct-align/1m9xC.t06-thin90.a2m.gz, have 9327 columns in 47 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ruwA/nostruct-align/1ruwA.t06-thin90.a2m.gz # 1ruwA.t06-thin90.a2m with 2000 sequences, total weight= 2000 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2695 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ruwA/info/1ruwA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1ruwA/nostruct-align/1ruwA.t06-thin90.a2m.gz, have 9396 columns in 48 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p5zB/nostruct-align/1p5zB.t06-thin90.a2m.gz # 1p5zB.t06-thin90.a2m with 4755 sequences, total weight= 4755 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.803211 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p5zB/info/1p5zB.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p5zB/nostruct-align/1p5zB.t06-thin90.a2m.gz, have 9625 columns in 49 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1khxA/nostruct-align/1khxA.t06-thin90.a2m.gz # 1khxA.t06-thin90.a2m with 100 sequences, total weight= 29.2318 avg weight= 0.292318 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1khxA/info/1khxA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1khxA/nostruct-align/1khxA.t06-thin90.a2m.gz, have 9828 columns in 50 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hbnC/nostruct-align/1hbnC.t06-thin90.a2m.gz # 1hbnC.t06-thin90.a2m with 19 sequences, total weight= 3.3694 avg weight= 0.177337 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hbnC/info/1hbnC.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hbnC/nostruct-align/1hbnC.t06-thin90.a2m.gz, have 10075 columns in 51 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bm8/nostruct-align/1bm8.t06-thin90.a2m.gz # 1bm8.t06-thin90.a2m with 62 sequences, total weight= 17.4628 avg weight= 0.281658 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bm8/info/1bm8.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bm8/nostruct-align/1bm8.t06-thin90.a2m.gz, have 10174 columns in 52 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nlrA/nostruct-align/2nlrA.t06-thin90.a2m.gz # 2nlrA.t06-thin90.a2m with 91 sequences, total weight= 35.2786 avg weight= 0.387677 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nlrA/info/2nlrA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/2n/2nlrA/nostruct-align/2nlrA.t06-thin90.a2m.gz, have 10396 columns in 53 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uebA/nostruct-align/1uebA.t06-thin90.a2m.gz # 1uebA.t06-thin90.a2m with 375 sequences, total weight= 27.4744 avg weight= 0.0732652 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uebA/info/1uebA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uebA/nostruct-align/1uebA.t06-thin90.a2m.gz, have 10580 columns in 54 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dytA/nostruct-align/1dytA.t06-thin90.a2m.gz # 1dytA.t06-thin90.a2m with 204 sequences, total weight= 35.4502 avg weight= 0.173776 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dytA/info/1dytA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dytA/nostruct-align/1dytA.t06-thin90.a2m.gz, have 10713 columns in 55 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rreA/nostruct-align/1rreA.t06-thin90.a2m.gz # 1rreA.t06-thin90.a2m with 644 sequences, total weight= 114.414 avg weight= 0.177661 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30848 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rreA/info/1rreA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rreA/nostruct-align/1rreA.t06-thin90.a2m.gz, have 10895 columns in 56 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iwlA/nostruct-align/1iwlA.t06-thin90.a2m.gz # 1iwlA.t06-thin90.a2m with 314 sequences, total weight= 314 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0248 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iwlA/info/1iwlA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iwlA/nostruct-align/1iwlA.t06-thin90.a2m.gz, have 11072 columns in 57 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2biiA/nostruct-align/2biiA.t06-thin90.a2m.gz # 2biiA.t06-thin90.a2m with 432 sequences, total weight= 134.66 avg weight= 0.311713 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30081 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2biiA/info/2biiA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/2b/2biiA/nostruct-align/2biiA.t06-thin90.a2m.gz, have 11487 columns in 58 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1evyA/nostruct-align/1evyA.t06-thin90.a2m.gz # 1evyA.t06-thin90.a2m with 1596 sequences, total weight= 1596 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.940487 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1evyA/info/1evyA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1evyA/nostruct-align/1evyA.t06-thin90.a2m.gz, have 11833 columns in 59 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2p/2pvbA/nostruct-align/2pvbA.t06-thin90.a2m.gz # 2pvbA.t06-thin90.a2m with 1869 sequences, total weight= 1869 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21678 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2p/2pvbA/info/2pvbA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/2p/2pvbA/nostruct-align/2pvbA.t06-thin90.a2m.gz, have 11940 columns in 60 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jcdA/nostruct-align/1jcdA.t06-thin90.a2m.gz # 1jcdA.t06-thin90.a2m with 10 sequences, total weight= 4.67726 avg weight= 0.467726 12 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jcdA/info/1jcdA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jcdA/nostruct-align/1jcdA.t06-thin90.a2m.gz, have 11990 columns in 61 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a2pA/nostruct-align/1a2pA.t06-thin90.a2m.gz # 1a2pA.t06-thin90.a2m with 54 sequences, total weight= 15.2622 avg weight= 0.282633 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a2pA/info/1a2pA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1a2pA/nostruct-align/1a2pA.t06-thin90.a2m.gz, have 12098 columns in 62 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fn9A/nostruct-align/1fn9A.t06-thin90.a2m.gz # 1fn9A.t06-thin90.a2m with 11 sequences, total weight= 8.96845 avg weight= 0.815314 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fn9A/info/1fn9A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fn9A/nostruct-align/1fn9A.t06-thin90.a2m.gz, have 12463 columns in 63 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rfyA/nostruct-align/1rfyA.t06-thin90.a2m.gz # 1rfyA.t06-thin90.a2m with 3 sequences, total weight= 2.20191 avg weight= 0.733971 8 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rfyA/info/1rfyA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rfyA/nostruct-align/1rfyA.t06-thin90.a2m.gz, have 12552 columns in 64 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n1jB/nostruct-align/1n1jB.t06-thin90.a2m.gz # 1n1jB.t06-thin90.a2m with 120 sequences, total weight= 22.7916 avg weight= 0.18993 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n1jB/info/1n1jB.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n1jB/nostruct-align/1n1jB.t06-thin90.a2m.gz, have 12630 columns in 65 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y0yA/nostruct-align/1y0yA.t06-thin90.a2m.gz # 1y0yA.t06-thin90.a2m with 2743 sequences, total weight= 2743 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.937241 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y0yA/info/1y0yA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1y0yA/nostruct-align/1y0yA.t06-thin90.a2m.gz, have 12965 columns in 66 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j27A/nostruct-align/1j27A.t06-thin90.a2m.gz # 1j27A.t06-thin90.a2m with 64 sequences, total weight= 23.1152 avg weight= 0.361175 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j27A/info/1j27A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j27A/nostruct-align/1j27A.t06-thin90.a2m.gz, have 13063 columns in 67 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g12A/nostruct-align/1g12A.t06-thin90.a2m.gz # 1g12A.t06-thin90.a2m with 74 sequences, total weight= 74 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26603 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g12A/info/1g12A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g12A/nostruct-align/1g12A.t06-thin90.a2m.gz, have 13230 columns in 68 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1ng6A/nostruct-align/1ng6A.t06-thin90.a2m.gz # 1ng6A.t06-thin90.a2m with 236 sequences, total weight= 21.1423 avg weight= 0.0895861 43 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1ng6A/info/1ng6A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1ng6A/nostruct-align/1ng6A.t06-thin90.a2m.gz, have 13378 columns in 69 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q7zA/nostruct-align/1q7zA.t06-thin90.a2m.gz # 1q7zA.t06-thin90.a2m with 838 sequences, total weight= 255.266 avg weight= 0.304613 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30743 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q7zA/info/1q7zA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q7zA/nostruct-align/1q7zA.t06-thin90.a2m.gz, have 13937 columns in 70 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ybkA/nostruct-align/1ybkA.t06-thin90.a2m.gz # 1ybkA.t06-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.59493 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ybkA/info/1ybkA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1ybkA/nostruct-align/1ybkA.t06-thin90.a2m.gz, have 13989 columns in 71 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nc5A/nostruct-align/1nc5A.t06-thin90.a2m.gz # 1nc5A.t06-thin90.a2m with 289 sequences, total weight= 289 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.978334 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nc5A/info/1nc5A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nc5A/nostruct-align/1nc5A.t06-thin90.a2m.gz, have 14352 columns in 72 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1llmC/nostruct-align/1llmC.t06-thin90.a2m.gz # 1llmC.t06-thin90.a2m with 14310 sequences, total weight= 2401.81 avg weight= 0.167841 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.35794 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1llmC/info/1llmC.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1llmC/nostruct-align/1llmC.t06-thin90.a2m.gz, have 14439 columns in 73 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1su8A/nostruct-align/1su8A.t06-thin90.a2m.gz # 1su8A.t06-thin90.a2m with 179 sequences, total weight= 50.5193 avg weight= 0.282231 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1su8A/info/1su8A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1su8A/nostruct-align/1su8A.t06-thin90.a2m.gz, have 15072 columns in 74 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mba/nostruct-align/1mba.t06-thin90.a2m.gz # 1mba.t06-thin90.a2m with 1015 sequences, total weight= 1015 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23879 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mba/info/1mba.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mba/nostruct-align/1mba.t06-thin90.a2m.gz, have 15218 columns in 75 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tjxA/nostruct-align/1tjxA.t06-thin90.a2m.gz # 1tjxA.t06-thin90.a2m with 2588 sequences, total weight= 2588 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.893172 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tjxA/info/1tjxA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tjxA/nostruct-align/1tjxA.t06-thin90.a2m.gz, have 15374 columns in 76 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n8vA/nostruct-align/1n8vA.t06-thin90.a2m.gz # 1n8vA.t06-thin90.a2m with 140 sequences, total weight= 18.8439 avg weight= 0.1346 42 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n8vA/info/1n8vA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n8vA/nostruct-align/1n8vA.t06-thin90.a2m.gz, have 15475 columns in 77 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f1uA/nostruct-align/1f1uA.t06-thin90.a2m.gz # 1f1uA.t06-thin90.a2m with 2215 sequences, total weight= 2215 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.952836 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f1uA/info/1f1uA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f1uA/nostruct-align/1f1uA.t06-thin90.a2m.gz, have 15797 columns in 78 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tqjA/nostruct-align/1tqjA.t06-thin90.a2m.gz # 1tqjA.t06-thin90.a2m with 1207 sequences, total weight= 1207 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12704 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tqjA/info/1tqjA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tqjA/nostruct-align/1tqjA.t06-thin90.a2m.gz, have 16014 columns in 79 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oneA/nostruct-align/1oneA.t06-thin90.a2m.gz # 1oneA.t06-thin90.a2m with 674 sequences, total weight= 39.9626 avg weight= 0.0592917 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oneA/info/1oneA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oneA/nostruct-align/1oneA.t06-thin90.a2m.gz, have 16450 columns in 80 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gskA/nostruct-align/1gskA.t06-thin90.a2m.gz # 1gskA.t06-thin90.a2m with 1095 sequences, total weight= 1095 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07305 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gskA/info/1gskA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gskA/nostruct-align/1gskA.t06-thin90.a2m.gz, have 16952 columns in 81 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j3aA/nostruct-align/1j3aA.t06-thin90.a2m.gz # 1j3aA.t06-thin90.a2m with 430 sequences, total weight= 44.1324 avg weight= 0.102633 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j3aA/info/1j3aA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j3aA/nostruct-align/1j3aA.t06-thin90.a2m.gz, have 17081 columns in 82 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dgwA/nostruct-align/1dgwA.t06-thin90.a2m.gz # 1dgwA.t06-thin90.a2m with 572 sequences, total weight= 572 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17796 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dgwA/info/1dgwA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dgwA/nostruct-align/1dgwA.t06-thin90.a2m.gz, have 17259 columns in 83 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w50A/nostruct-align/1w50A.t06-thin90.a2m.gz # 1w50A.t06-thin90.a2m with 1120 sequences, total weight= 1120 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11337 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w50A/info/1w50A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w50A/nostruct-align/1w50A.t06-thin90.a2m.gz, have 17636 columns in 84 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gx5A/nostruct-align/1gx5A.t06-thin90.a2m.gz # 1gx5A.t06-thin90.a2m with 272 sequences, total weight= 142.493 avg weight= 0.523871 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30073 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gx5A/info/1gx5A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gx5A/nostruct-align/1gx5A.t06-thin90.a2m.gz, have 18166 columns in 85 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mun/nostruct-align/1mun.t06-thin90.a2m.gz # 1mun.t06-thin90.a2m with 1140 sequences, total weight= 1140 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18335 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mun/info/1mun.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mun/nostruct-align/1mun.t06-thin90.a2m.gz, have 18391 columns in 86 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54B/nostruct-align/1v54B.t06-thin90.a2m.gz # 1v54B.t06-thin90.a2m with 1999 sequences, total weight= 70.3823 avg weight= 0.0352088 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30225 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54B/info/1v54B.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v54B/nostruct-align/1v54B.t06-thin90.a2m.gz, have 18618 columns in 87 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1owlA/nostruct-align/1owlA.t06-thin90.a2m.gz # 1owlA.t06-thin90.a2m with 668 sequences, total weight= 668 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24828 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1owlA/info/1owlA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1owlA/nostruct-align/1owlA.t06-thin90.a2m.gz, have 19091 columns in 88 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rrmA/nostruct-align/1rrmA.t06-thin90.a2m.gz # 1rrmA.t06-thin90.a2m with 1347 sequences, total weight= 1347 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17413 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rrmA/info/1rrmA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rrmA/nostruct-align/1rrmA.t06-thin90.a2m.gz, have 19476 columns in 89 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d0dA/nostruct-align/1d0dA.t06-thin90.a2m.gz # 1d0dA.t06-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20764 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d0dA/info/1d0dA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d0dA/nostruct-align/1d0dA.t06-thin90.a2m.gz, have 19536 columns in 90 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ibyA/nostruct-align/1ibyA.t06-thin90.a2m.gz # 1ibyA.t06-thin90.a2m with 4 sequences, total weight= 2.05371 avg weight= 0.513427 9 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ibyA/info/1ibyA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ibyA/nostruct-align/1ibyA.t06-thin90.a2m.gz, have 19648 columns in 91 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o82A/nostruct-align/1o82A.t06-thin90.a2m.gz # 1o82A.t06-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.634682 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o82A/info/1o82A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o82A/nostruct-align/1o82A.t06-thin90.a2m.gz, have 19718 columns in 92 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1brt/nostruct-align/1brt.t06-thin90.a2m.gz # 1brt.t06-thin90.a2m with 9794 sequences, total weight= 9794 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.689554 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1brt/info/1brt.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1brt/nostruct-align/1brt.t06-thin90.a2m.gz, have 19995 columns in 93 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oqqA/nostruct-align/1oqqA.t06-thin90.a2m.gz # 1oqqA.t06-thin90.a2m with 638 sequences, total weight= 496.449 avg weight= 0.778134 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30497 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oqqA/info/1oqqA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oqqA/nostruct-align/1oqqA.t06-thin90.a2m.gz, have 20101 columns in 94 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nrjB/nostruct-align/1nrjB.t06-thin90.a2m.gz # 1nrjB.t06-thin90.a2m with 8721 sequences, total weight= 8721 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05463 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nrjB/info/1nrjB.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nrjB/nostruct-align/1nrjB.t06-thin90.a2m.gz, have 20292 columns in 95 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1behA/nostruct-align/1behA.t06-thin90.a2m.gz # 1behA.t06-thin90.a2m with 443 sequences, total weight= 443 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23988 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1behA/info/1behA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1behA/nostruct-align/1behA.t06-thin90.a2m.gz, have 20476 columns in 96 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gvjA/nostruct-align/1gvjA.t06-thin90.a2m.gz # 1gvjA.t06-thin90.a2m with 282 sequences, total weight= 54.8354 avg weight= 0.194452 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30191 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gvjA/info/1gvjA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gvjA/nostruct-align/1gvjA.t06-thin90.a2m.gz, have 20617 columns in 97 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sgwA/nostruct-align/1sgwA.t06-thin90.a2m.gz # 1sgwA.t06-thin90.a2m with 18705 sequences, total weight= 526.895 avg weight= 0.0281687 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.40152 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sgwA/info/1sgwA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sgwA/nostruct-align/1sgwA.t06-thin90.a2m.gz, have 20817 columns in 98 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nkiA/nostruct-align/1nkiA.t06-thin90.a2m.gz # 1nkiA.t06-thin90.a2m with 3640 sequences, total weight= 3640 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.853906 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nkiA/info/1nkiA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nkiA/nostruct-align/1nkiA.t06-thin90.a2m.gz, have 20951 columns in 99 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tfzA/nostruct-align/1tfzA.t06-thin90.a2m.gz # 1tfzA.t06-thin90.a2m with 919 sequences, total weight= 919 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16459 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tfzA/info/1tfzA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tfzA/nostruct-align/1tfzA.t06-thin90.a2m.gz, have 21315 columns in 100 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rv9A/nostruct-align/1rv9A.t06-thin90.a2m.gz # 1rv9A.t06-thin90.a2m with 312 sequences, total weight= 49.3097 avg weight= 0.158044 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30076 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rv9A/info/1rv9A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rv9A/nostruct-align/1rv9A.t06-thin90.a2m.gz, have 21557 columns in 101 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ypyA/nostruct-align/1ypyA.t06-thin90.a2m.gz # 1ypyA.t06-thin90.a2m with 32 sequences, total weight= 13.5446 avg weight= 0.42327 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ypyA/info/1ypyA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1ypyA/nostruct-align/1ypyA.t06-thin90.a2m.gz, have 21739 columns in 102 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mg7A/nostruct-align/1mg7A.t06-thin90.a2m.gz # 1mg7A.t06-thin90.a2m with 5 sequences, total weight= 3.68133 avg weight= 0.736265 10 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mg7A/info/1mg7A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mg7A/nostruct-align/1mg7A.t06-thin90.a2m.gz, have 22090 columns in 103 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1us5A/nostruct-align/1us5A.t06-thin90.a2m.gz # 1us5A.t06-thin90.a2m with 4352 sequences, total weight= 4352 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.800377 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1us5A/info/1us5A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1us5A/nostruct-align/1us5A.t06-thin90.a2m.gz, have 22387 columns in 104 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1ctf/nostruct-align/1ctf.t06-thin90.a2m.gz # 1ctf.t06-thin90.a2m with 357 sequences, total weight= 8.40394 avg weight= 0.0235405 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1ctf/info/1ctf.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1ctf/nostruct-align/1ctf.t06-thin90.a2m.gz, have 22455 columns in 105 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gai/nostruct-align/1gai.t06-thin90.a2m.gz # 1gai.t06-thin90.a2m with 279 sequences, total weight= 279 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20027 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gai/info/1gai.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gai/nostruct-align/1gai.t06-thin90.a2m.gz, have 22927 columns in 106 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jsdB/nostruct-align/1jsdB.t06-thin90.a2m.gz # 1jsdB.t06-thin90.a2m with 49 sequences, total weight= 6.58441 avg weight= 0.134376 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jsdB/info/1jsdB.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jsdB/nostruct-align/1jsdB.t06-thin90.a2m.gz, have 23087 columns in 107 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e9gA/nostruct-align/1e9gA.t06-thin90.a2m.gz # 1e9gA.t06-thin90.a2m with 354 sequences, total weight= 65.9128 avg weight= 0.186194 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e9gA/info/1e9gA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e9gA/nostruct-align/1e9gA.t06-thin90.a2m.gz, have 23371 columns in 108 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lucA/nostruct-align/1lucA.t06-thin90.a2m.gz # 1lucA.t06-thin90.a2m with 1355 sequences, total weight= 1355 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12321 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lucA/info/1lucA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lucA/nostruct-align/1lucA.t06-thin90.a2m.gz, have 23697 columns in 109 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mtyG/nostruct-align/1mtyG.t06-thin90.a2m.gz # 1mtyG.t06-thin90.a2m with 8 sequences, total weight= 4.32487 avg weight= 0.540609 15 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mtyG/info/1mtyG.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mtyG/nostruct-align/1mtyG.t06-thin90.a2m.gz, have 23859 columns in 110 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s5aA/nostruct-align/1s5aA.t06-thin90.a2m.gz # 1s5aA.t06-thin90.a2m with 1033 sequences, total weight= 1033 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.883189 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s5aA/info/1s5aA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s5aA/nostruct-align/1s5aA.t06-thin90.a2m.gz, have 23998 columns in 111 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1ntvA/nostruct-align/1ntvA.t06-thin90.a2m.gz # 1ntvA.t06-thin90.a2m with 342 sequences, total weight= 342 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0869 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1ntvA/info/1ntvA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1ntvA/nostruct-align/1ntvA.t06-thin90.a2m.gz, have 24150 columns in 112 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h1nA/nostruct-align/1h1nA.t06-thin90.a2m.gz # 1h1nA.t06-thin90.a2m with 2180 sequences, total weight= 2180 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.837585 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h1nA/info/1h1nA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h1nA/nostruct-align/1h1nA.t06-thin90.a2m.gz, have 24455 columns in 113 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sx7A/nostruct-align/1sx7A.t06-thin90.a2m.gz # 1sx7A.t06-thin90.a2m with 184 sequences, total weight= 184 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2731 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sx7A/info/1sx7A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sx7A/nostruct-align/1sx7A.t06-thin90.a2m.gz, have 24619 columns in 114 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s29A/nostruct-align/1s29A.t06-thin90.a2m.gz # 1s29A.t06-thin90.a2m with 162 sequences, total weight= 36.0861 avg weight= 0.222754 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s29A/info/1s29A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s29A/nostruct-align/1s29A.t06-thin90.a2m.gz, have 24711 columns in 115 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f8mA/nostruct-align/1f8mA.t06-thin90.a2m.gz # 1f8mA.t06-thin90.a2m with 457 sequences, total weight= 91.6073 avg weight= 0.200454 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30056 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f8mA/info/1f8mA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f8mA/nostruct-align/1f8mA.t06-thin90.a2m.gz, have 25138 columns in 116 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1earA/nostruct-align/1earA.t06-thin90.a2m.gz # 1earA.t06-thin90.a2m with 130 sequences, total weight= 51.3111 avg weight= 0.3947 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30037 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1earA/info/1earA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1earA/nostruct-align/1earA.t06-thin90.a2m.gz, have 25280 columns in 117 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r9wA/nostruct-align/1r9wA.t06-thin90.a2m.gz # 1r9wA.t06-thin90.a2m with 95 sequences, total weight= 11.7816 avg weight= 0.124017 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r9wA/info/1r9wA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r9wA/nostruct-align/1r9wA.t06-thin90.a2m.gz, have 25418 columns in 118 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1woqA/nostruct-align/1woqA.t06-thin90.a2m.gz # 1woqA.t06-thin90.a2m with 1366 sequences, total weight= 1366 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07136 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1woqA/info/1woqA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1woqA/nostruct-align/1woqA.t06-thin90.a2m.gz, have 25671 columns in 119 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xubA/nostruct-align/1xubA.t06-thin90.a2m.gz # 1xubA.t06-thin90.a2m with 808 sequences, total weight= 808 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17589 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xubA/info/1xubA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xubA/nostruct-align/1xubA.t06-thin90.a2m.gz, have 25949 columns in 120 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vimA/nostruct-align/1vimA.t06-thin90.a2m.gz # 1vimA.t06-thin90.a2m with 2109 sequences, total weight= 2109 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.981532 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vimA/info/1vimA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vimA/nostruct-align/1vimA.t06-thin90.a2m.gz, have 26141 columns in 121 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eluA/nostruct-align/1eluA.t06-thin90.a2m.gz # 1eluA.t06-thin90.a2m with 11056 sequences, total weight= 11056 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.839482 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eluA/info/1eluA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1eluA/nostruct-align/1eluA.t06-thin90.a2m.gz, have 26522 columns in 122 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m65A/nostruct-align/1m65A.t06-thin90.a2m.gz # 1m65A.t06-thin90.a2m with 1197 sequences, total weight= 1197 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.964033 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m65A/info/1m65A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m65A/nostruct-align/1m65A.t06-thin90.a2m.gz, have 26756 columns in 123 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1whzA/nostruct-align/1whzA.t06-thin90.a2m.gz # 1whzA.t06-thin90.a2m with 120 sequences, total weight= 41.2652 avg weight= 0.343876 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1whzA/info/1whzA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1whzA/nostruct-align/1whzA.t06-thin90.a2m.gz, have 26826 columns in 124 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e2kA/nostruct-align/1e2kA.t06-thin90.a2m.gz # 1e2kA.t06-thin90.a2m with 741 sequences, total weight= 741 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05303 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e2kA/info/1e2kA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e2kA/nostruct-align/1e2kA.t06-thin90.a2m.gz, have 27134 columns in 125 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cs6A/nostruct-align/1cs6A.t06-thin90.a2m.gz # 1cs6A.t06-thin90.a2m with 6047 sequences, total weight= 6047 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.885638 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cs6A/info/1cs6A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cs6A/nostruct-align/1cs6A.t06-thin90.a2m.gz, have 27516 columns in 126 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y0hA/nostruct-align/1y0hA.t06-thin90.a2m.gz # 1y0hA.t06-thin90.a2m with 572 sequences, total weight= 572 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.966099 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y0hA/info/1y0hA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1y0hA/nostruct-align/1y0hA.t06-thin90.a2m.gz, have 27617 columns in 127 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u7gA/nostruct-align/1u7gA.t06-thin90.a2m.gz # 1u7gA.t06-thin90.a2m with 705 sequences, total weight= 65.9411 avg weight= 0.0935334 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30121 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u7gA/info/1u7gA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1u7gA/nostruct-align/1u7gA.t06-thin90.a2m.gz, have 28000 columns in 128 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j2lA/nostruct-align/1j2lA.t06-thin90.a2m.gz # 1j2lA.t06-thin90.a2m with 282 sequences, total weight= 11.1835 avg weight= 0.0396576 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j2lA/info/1j2lA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j2lA/nostruct-align/1j2lA.t06-thin90.a2m.gz, have 28068 columns in 129 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kaeA/nostruct-align/1kaeA.t06-thin90.a2m.gz # 1kaeA.t06-thin90.a2m with 3852 sequences, total weight= 1231.85 avg weight= 0.319794 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.33117 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kaeA/info/1kaeA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kaeA/nostruct-align/1kaeA.t06-thin90.a2m.gz, have 28502 columns in 130 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dfmA/nostruct-align/1dfmA.t06-thin90.a2m.gz # 1dfmA.t06-thin90.a2m with 9 sequences, total weight= 9 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23138 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dfmA/info/1dfmA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dfmA/nostruct-align/1dfmA.t06-thin90.a2m.gz, have 28725 columns in 131 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k55A/nostruct-align/1k55A.t06-thin90.a2m.gz # 1k55A.t06-thin90.a2m with 2105 sequences, total weight= 2105 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12239 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k55A/info/1k55A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k55A/nostruct-align/1k55A.t06-thin90.a2m.gz, have 28970 columns in 132 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uk8A/nostruct-align/1uk8A.t06-thin90.a2m.gz # 1uk8A.t06-thin90.a2m with 10277 sequences, total weight= 10277 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.686901 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uk8A/info/1uk8A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uk8A/nostruct-align/1uk8A.t06-thin90.a2m.gz, have 29241 columns in 133 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hz6A/nostruct-align/1hz6A.t06-thin90.a2m.gz # 1hz6A.t06-thin90.a2m with 9 sequences, total weight= 2.72218 avg weight= 0.302464 11 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hz6A/info/1hz6A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hz6A/nostruct-align/1hz6A.t06-thin90.a2m.gz, have 29308 columns in 134 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1inlA/nostruct-align/1inlA.t06-thin90.a2m.gz # 1inlA.t06-thin90.a2m with 10705 sequences, total weight= 10705 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.748412 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1inlA/info/1inlA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1inlA/nostruct-align/1inlA.t06-thin90.a2m.gz, have 29593 columns in 135 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uv7A/nostruct-align/1uv7A.t06-thin90.a2m.gz # 1uv7A.t06-thin90.a2m with 40 sequences, total weight= 12.3515 avg weight= 0.308787 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uv7A/info/1uv7A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uv7A/nostruct-align/1uv7A.t06-thin90.a2m.gz, have 29669 columns in 136 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bo9B/nostruct-align/2bo9B.t06-thin90.a2m.gz # 2bo9B.t06-thin90.a2m with 16 sequences, total weight= 7.62958 avg weight= 0.476849 20 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bo9B/info/2bo9B.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/2b/2bo9B/nostruct-align/2bo9B.t06-thin90.a2m.gz, have 29886 columns in 137 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cxqA/nostruct-align/1cxqA.t06-thin90.a2m.gz # 1cxqA.t06-thin90.a2m with 2758 sequences, total weight= 2758 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05621 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cxqA/info/1cxqA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cxqA/nostruct-align/1cxqA.t06-thin90.a2m.gz, have 30029 columns in 138 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bs0A/nostruct-align/1bs0A.t06-thin90.a2m.gz # 1bs0A.t06-thin90.a2m with 10806 sequences, total weight= 10806 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.848262 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bs0A/info/1bs0A.stride-mixed.str2 WARNING: skipping c, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1b/1bs0A/nostruct-align/1bs0A.t06-thin90.a2m.gz, have 30411 columns in 139 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pfbA/nostruct-align/1pfbA.t06-thin90.a2m.gz # 1pfbA.t06-thin90.a2m with 262 sequences, total weight= 33.8854 avg weight= 0.129333 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pfbA/info/1pfbA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pfbA/nostruct-align/1pfbA.t06-thin90.a2m.gz, have 30466 columns in 140 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3s/3sil/nostruct-align/3sil.t06-thin90.a2m.gz # 3sil.t06-thin90.a2m with 755 sequences, total weight= 755 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19171 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3s/3sil/info/3sil.stride-mixed.str2 WARNING: skipping c, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/3s/3sil/nostruct-align/3sil.t06-thin90.a2m.gz, have 30844 columns in 141 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vhwA/nostruct-align/1vhwA.t06-thin90.a2m.gz # 1vhwA.t06-thin90.a2m with 1175 sequences, total weight= 1175 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0046 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vhwA/info/1vhwA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vhwA/nostruct-align/1vhwA.t06-thin90.a2m.gz, have 31081 columns in 142 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xsvA/nostruct-align/1xsvA.t06-thin90.a2m.gz # 1xsvA.t06-thin90.a2m with 58 sequences, total weight= 15.046 avg weight= 0.259414 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xsvA/info/1xsvA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xsvA/nostruct-align/1xsvA.t06-thin90.a2m.gz, have 31187 columns in 143 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xqaA/nostruct-align/1xqaA.t06-thin90.a2m.gz # 1xqaA.t06-thin90.a2m with 3548 sequences, total weight= 3548 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.939056 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xqaA/info/1xqaA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xqaA/nostruct-align/1xqaA.t06-thin90.a2m.gz, have 31299 columns in 144 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ut1A/nostruct-align/1ut1A.t06-thin90.a2m.gz # 1ut1A.t06-thin90.a2m with 9 sequences, total weight= 5.51544 avg weight= 0.612826 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ut1A/info/1ut1A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ut1A/nostruct-align/1ut1A.t06-thin90.a2m.gz, have 31439 columns in 145 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mr7A/nostruct-align/1mr7A.t06-thin90.a2m.gz # 1mr7A.t06-thin90.a2m with 2980 sequences, total weight= 2980 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0535 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mr7A/info/1mr7A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mr7A/nostruct-align/1mr7A.t06-thin90.a2m.gz, have 31642 columns in 146 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xkpA/nostruct-align/1xkpA.t06-thin90.a2m.gz # 1xkpA.t06-thin90.a2m with 43 sequences, total weight= 43 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28707 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xkpA/info/1xkpA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xkpA/nostruct-align/1xkpA.t06-thin90.a2m.gz, have 31873 columns in 147 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r89A/nostruct-align/1r89A.t06-thin90.a2m.gz # 1r89A.t06-thin90.a2m with 581 sequences, total weight= 581 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.944246 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r89A/info/1r89A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r89A/nostruct-align/1r89A.t06-thin90.a2m.gz, have 32310 columns in 148 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gv9A/nostruct-align/1gv9A.t06-thin90.a2m.gz # 1gv9A.t06-thin90.a2m with 468 sequences, total weight= 468 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20777 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gv9A/info/1gv9A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gv9A/nostruct-align/1gv9A.t06-thin90.a2m.gz, have 32533 columns in 149 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1koe/nostruct-align/1koe.t06-thin90.a2m.gz # 1koe.t06-thin90.a2m with 49 sequences, total weight= 26.6645 avg weight= 0.544174 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1koe/info/1koe.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1koe/nostruct-align/1koe.t06-thin90.a2m.gz, have 32705 columns in 150 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mfgA/nostruct-align/1mfgA.t06-thin90.a2m.gz # 1mfgA.t06-thin90.a2m with 1673 sequences, total weight= 1673 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24937 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mfgA/info/1mfgA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mfgA/nostruct-align/1mfgA.t06-thin90.a2m.gz, have 32800 columns in 151 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wmhA/nostruct-align/1wmhA.t06-thin90.a2m.gz # 1wmhA.t06-thin90.a2m with 19 sequences, total weight= 5.41707 avg weight= 0.285109 20 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wmhA/info/1wmhA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wmhA/nostruct-align/1wmhA.t06-thin90.a2m.gz, have 32883 columns in 152 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pv5A/nostruct-align/1pv5A.t06-thin90.a2m.gz # 1pv5A.t06-thin90.a2m with 48 sequences, total weight= 48 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12166 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pv5A/info/1pv5A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pv5A/nostruct-align/1pv5A.t06-thin90.a2m.gz, have 33144 columns in 153 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1psrA/nostruct-align/1psrA.t06-thin90.a2m.gz # 1psrA.t06-thin90.a2m with 192 sequences, total weight= 73.8324 avg weight= 0.384544 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30084 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1psrA/info/1psrA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1psrA/nostruct-align/1psrA.t06-thin90.a2m.gz, have 33244 columns in 154 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vj2A/nostruct-align/1vj2A.t06-thin90.a2m.gz # 1vj2A.t06-thin90.a2m with 2881 sequences, total weight= 2881 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.827679 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vj2A/info/1vj2A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vj2A/nostruct-align/1vj2A.t06-thin90.a2m.gz, have 33358 columns in 155 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tjyA/nostruct-align/1tjyA.t06-thin90.a2m.gz # 1tjyA.t06-thin90.a2m with 3142 sequences, total weight= 3142 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.904742 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tjyA/info/1tjyA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tjyA/nostruct-align/1tjyA.t06-thin90.a2m.gz, have 33674 columns in 156 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1smoA/nostruct-align/1smoA.t06-thin90.a2m.gz # 1smoA.t06-thin90.a2m with 474 sequences, total weight= 12.1582 avg weight= 0.0256502 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1smoA/info/1smoA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1smoA/nostruct-align/1smoA.t06-thin90.a2m.gz, have 33787 columns in 157 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kzfA/nostruct-align/1kzfA.t06-thin90.a2m.gz # 1kzfA.t06-thin90.a2m with 412 sequences, total weight= 412 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0385 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kzfA/info/1kzfA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kzfA/nostruct-align/1kzfA.t06-thin90.a2m.gz, have 33985 columns in 158 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nr0A/nostruct-align/1nr0A.t06-thin90.a2m.gz # 1nr0A.t06-thin90.a2m with 10028 sequences, total weight= 10028 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.731425 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nr0A/info/1nr0A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nr0A/nostruct-align/1nr0A.t06-thin90.a2m.gz, have 34595 columns in 159 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vyrA/nostruct-align/1vyrA.t06-thin90.a2m.gz # 1vyrA.t06-thin90.a2m with 1012 sequences, total weight= 147.378 avg weight= 0.145631 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3125 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vyrA/info/1vyrA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vyrA/nostruct-align/1vyrA.t06-thin90.a2m.gz, have 34958 columns in 160 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nlnA/nostruct-align/1nlnA.t06-thin90.a2m.gz # 1nlnA.t06-thin90.a2m with 37 sequences, total weight= 6.68535 avg weight= 0.180685 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nlnA/info/1nlnA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nlnA/nostruct-align/1nlnA.t06-thin90.a2m.gz, have 35161 columns in 161 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hdhA/nostruct-align/1hdhA.t06-thin90.a2m.gz # 1hdhA.t06-thin90.a2m with 1822 sequences, total weight= 1822 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.933565 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hdhA/info/1hdhA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hdhA/nostruct-align/1hdhA.t06-thin90.a2m.gz, have 35686 columns in 162 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vp6A/nostruct-align/1vp6A.t06-thin90.a2m.gz # 1vp6A.t06-thin90.a2m with 3171 sequences, total weight= 3171 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.914076 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vp6A/info/1vp6A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vp6A/nostruct-align/1vp6A.t06-thin90.a2m.gz, have 35819 columns in 163 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eb6A/nostruct-align/1eb6A.t06-thin90.a2m.gz # 1eb6A.t06-thin90.a2m with 70 sequences, total weight= 55.749 avg weight= 0.796414 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eb6A/info/1eb6A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1eb6A/nostruct-align/1eb6A.t06-thin90.a2m.gz, have 35996 columns in 164 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v5vA/nostruct-align/1v5vA.t06-thin90.a2m.gz # 1v5vA.t06-thin90.a2m with 943 sequences, total weight= 943 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21571 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v5vA/info/1v5vA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v5vA/nostruct-align/1v5vA.t06-thin90.a2m.gz, have 36395 columns in 165 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yo3A/nostruct-align/1yo3A.t06-thin90.a2m.gz # 1yo3A.t06-thin90.a2m with 152 sequences, total weight= 42.4189 avg weight= 0.279072 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yo3A/info/1yo3A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1yo3A/nostruct-align/1yo3A.t06-thin90.a2m.gz, have 36480 columns in 166 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r9dA/nostruct-align/1r9dA.t06-thin90.a2m.gz # 1r9dA.t06-thin90.a2m with 203 sequences, total weight= 78.031 avg weight= 0.384389 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r9dA/info/1r9dA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r9dA/nostruct-align/1r9dA.t06-thin90.a2m.gz, have 37266 columns in 167 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gk9B/nostruct-align/1gk9B.t06-thin90.a2m.gz # 1gk9B.t06-thin90.a2m with 198 sequences, total weight= 198 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2259 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gk9B/info/1gk9B.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gk9B/nostruct-align/1gk9B.t06-thin90.a2m.gz, have 37823 columns in 168 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x91A/nostruct-align/1x91A.t06-thin90.a2m.gz # 1x91A.t06-thin90.a2m with 272 sequences, total weight= 272 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01014 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x91A/info/1x91A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1x91A/nostruct-align/1x91A.t06-thin90.a2m.gz, have 37972 columns in 169 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l9lA/nostruct-align/1l9lA.t06-thin90.a2m.gz # 1l9lA.t06-thin90.a2m with 8 sequences, total weight= 5.24114 avg weight= 0.655142 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l9lA/info/1l9lA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1l9lA/nostruct-align/1l9lA.t06-thin90.a2m.gz, have 38046 columns in 170 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vlpA/nostruct-align/1vlpA.t06-thin90.a2m.gz # 1vlpA.t06-thin90.a2m with 365 sequences, total weight= 128.403 avg weight= 0.35179 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30288 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vlpA/info/1vlpA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vlpA/nostruct-align/1vlpA.t06-thin90.a2m.gz, have 38464 columns in 171 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vjuA/nostruct-align/1vjuA.t06-thin90.a2m.gz # 1vjuA.t06-thin90.a2m with 226 sequences, total weight= 9.34377 avg weight= 0.0413441 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vjuA/info/1vjuA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vjuA/nostruct-align/1vjuA.t06-thin90.a2m.gz, have 38755 columns in 172 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ogwA/nostruct-align/1ogwA.t06-thin90.a2m.gz # 1ogwA.t06-thin90.a2m with 476 sequences, total weight= 77.1759 avg weight= 0.162134 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30206 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ogwA/info/1ogwA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ogwA/nostruct-align/1ogwA.t06-thin90.a2m.gz, have 38831 columns in 173 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r1tA/nostruct-align/1r1tA.t06-thin90.a2m.gz # 1r1tA.t06-thin90.a2m with 1756 sequences, total weight= 1756 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20242 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r1tA/info/1r1tA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r1tA/nostruct-align/1r1tA.t06-thin90.a2m.gz, have 38929 columns in 174 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h03P/nostruct-align/1h03P.t06-thin90.a2m.gz # 1h03P.t06-thin90.a2m with 1817 sequences, total weight= 1817 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14615 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h03P/info/1h03P.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h03P/nostruct-align/1h03P.t06-thin90.a2m.gz, have 39054 columns in 175 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w4xA/nostruct-align/1w4xA.t06-thin90.a2m.gz # 1w4xA.t06-thin90.a2m with 9878 sequences, total weight= 9878 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.942869 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w4xA/info/1w4xA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w4xA/nostruct-align/1w4xA.t06-thin90.a2m.gz, have 39587 columns in 176 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vjpA/nostruct-align/1vjpA.t06-thin90.a2m.gz # 1vjpA.t06-thin90.a2m with 123 sequences, total weight= 26.45 avg weight= 0.215041 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vjpA/info/1vjpA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vjpA/nostruct-align/1vjpA.t06-thin90.a2m.gz, have 39969 columns in 177 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h6lA/nostruct-align/1h6lA.t06-thin90.a2m.gz # 1h6lA.t06-thin90.a2m with 104 sequences, total weight= 104 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14562 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h6lA/info/1h6lA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h6lA/nostruct-align/1h6lA.t06-thin90.a2m.gz, have 40322 columns in 178 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oywA/nostruct-align/1oywA.t06-thin90.a2m.gz # 1oywA.t06-thin90.a2m with 8632 sequences, total weight= 8632 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.900048 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oywA/info/1oywA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oywA/nostruct-align/1oywA.t06-thin90.a2m.gz, have 40838 columns in 179 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fp2A/nostruct-align/1fp2A.t06-thin90.a2m.gz # 1fp2A.t06-thin90.a2m with 8337 sequences, total weight= 8337 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.741428 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fp2A/info/1fp2A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fp2A/nostruct-align/1fp2A.t06-thin90.a2m.gz, have 41183 columns in 180 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v9fA/nostruct-align/1v9fA.t06-thin90.a2m.gz # 1v9fA.t06-thin90.a2m with 1891 sequences, total weight= 1891 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20144 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v9fA/info/1v9fA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v9fA/nostruct-align/1v9fA.t06-thin90.a2m.gz, have 41433 columns in 181 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qwgA/nostruct-align/1qwgA.t06-thin90.a2m.gz # 1qwgA.t06-thin90.a2m with 37 sequences, total weight= 15.5719 avg weight= 0.420862 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qwgA/info/1qwgA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qwgA/nostruct-align/1qwgA.t06-thin90.a2m.gz, have 41684 columns in 182 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f7lA/nostruct-align/1f7lA.t06-thin90.a2m.gz # 1f7lA.t06-thin90.a2m with 483 sequences, total weight= 483 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22431 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f7lA/info/1f7lA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f7lA/nostruct-align/1f7lA.t06-thin90.a2m.gz, have 41802 columns in 183 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nbcA/nostruct-align/1nbcA.t06-thin90.a2m.gz # 1nbcA.t06-thin90.a2m with 84 sequences, total weight= 42.0806 avg weight= 0.500959 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nbcA/info/1nbcA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nbcA/nostruct-align/1nbcA.t06-thin90.a2m.gz, have 41957 columns in 184 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1my7A/nostruct-align/1my7A.t06-thin90.a2m.gz # 1my7A.t06-thin90.a2m with 80 sequences, total weight= 16.6143 avg weight= 0.207679 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1my7A/info/1my7A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1my7A/nostruct-align/1my7A.t06-thin90.a2m.gz, have 42064 columns in 185 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xu9A/nostruct-align/1xu9A.t06-thin90.a2m.gz # 1xu9A.t06-thin90.a2m with 13643 sequences, total weight= 13643 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02881 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xu9A/info/1xu9A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xu9A/nostruct-align/1xu9A.t06-thin90.a2m.gz, have 42333 columns in 186 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t6t1/nostruct-align/1t6t1.t06-thin90.a2m.gz # 1t6t1.t06-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.5933 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t6t1/info/1t6t1.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t6t1/nostruct-align/1t6t1.t06-thin90.a2m.gz, have 42441 columns in 187 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ek6A/nostruct-align/1ek6A.t06-thin90.a2m.gz # 1ek6A.t06-thin90.a2m with 14186 sequences, total weight= 14186 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.917292 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ek6A/info/1ek6A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ek6A/nostruct-align/1ek6A.t06-thin90.a2m.gz, have 42787 columns in 188 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ey4A/nostruct-align/1ey4A.t06-thin90.a2m.gz # 1ey4A.t06-thin90.a2m with 599 sequences, total weight= 599 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.145 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ey4A/info/1ey4A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ey4A/nostruct-align/1ey4A.t06-thin90.a2m.gz, have 42923 columns in 189 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gvzA/nostruct-align/1gvzA.t06-thin90.a2m.gz # 1gvzA.t06-thin90.a2m with 3267 sequences, total weight= 3267 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2874 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gvzA/info/1gvzA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gvzA/nostruct-align/1gvzA.t06-thin90.a2m.gz, have 43160 columns in 190 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gz8A/nostruct-align/1gz8A.t06-thin90.a2m.gz # 1gz8A.t06-thin90.a2m with 12858 sequences, total weight= 12858 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12308 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gz8A/info/1gz8A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gz8A/nostruct-align/1gz8A.t06-thin90.a2m.gz, have 43451 columns in 191 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ynbA/nostruct-align/1ynbA.t06-thin90.a2m.gz # 1ynbA.t06-thin90.a2m with 264 sequences, total weight= 264 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20934 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ynbA/info/1ynbA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1ynbA/nostruct-align/1ynbA.t06-thin90.a2m.gz, have 43618 columns in 192 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nytA/nostruct-align/1nytA.t06-thin90.a2m.gz # 1nytA.t06-thin90.a2m with 869 sequences, total weight= 869 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2311 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nytA/info/1nytA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nytA/nostruct-align/1nytA.t06-thin90.a2m.gz, have 43889 columns in 193 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1evlA/nostruct-align/1evlA.t06-thin90.a2m.gz # 1evlA.t06-thin90.a2m with 2164 sequences, total weight= 2164 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13486 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1evlA/info/1evlA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1evlA/nostruct-align/1evlA.t06-thin90.a2m.gz, have 44290 columns in 194 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hyoA/nostruct-align/1hyoA.t06-thin90.a2m.gz # 1hyoA.t06-thin90.a2m with 1048 sequences, total weight= 302.602 avg weight= 0.288742 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30786 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hyoA/info/1hyoA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hyoA/nostruct-align/1hyoA.t06-thin90.a2m.gz, have 44706 columns in 195 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mh1/nostruct-align/1mh1.t06-thin90.a2m.gz # 1mh1.t06-thin90.a2m with 4534 sequences, total weight= 4534 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1026 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mh1/info/1mh1.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mh1/nostruct-align/1mh1.t06-thin90.a2m.gz, have 44889 columns in 196 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qw9A/nostruct-align/1qw9A.t06-thin90.a2m.gz # 1qw9A.t06-thin90.a2m with 734 sequences, total weight= 734 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.815315 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qw9A/info/1qw9A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qw9A/nostruct-align/1qw9A.t06-thin90.a2m.gz, have 45386 columns in 197 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gtkA/nostruct-align/1gtkA.t06-thin90.a2m.gz # 1gtkA.t06-thin90.a2m with 398 sequences, total weight= 21.2421 avg weight= 0.0533721 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gtkA/info/1gtkA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gtkA/nostruct-align/1gtkA.t06-thin90.a2m.gz, have 45680 columns in 198 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hbnA/nostruct-align/1hbnA.t06-thin90.a2m.gz # 1hbnA.t06-thin90.a2m with 56 sequences, total weight= 5.32781 avg weight= 0.0951395 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hbnA/info/1hbnA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hbnA/nostruct-align/1hbnA.t06-thin90.a2m.gz, have 46227 columns in 199 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kqpA/nostruct-align/1kqpA.t06-thin90.a2m.gz # 1kqpA.t06-thin90.a2m with 2487 sequences, total weight= 2487 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.973782 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kqpA/info/1kqpA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kqpA/nostruct-align/1kqpA.t06-thin90.a2m.gz, have 46498 columns in 200 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mb3A/nostruct-align/1mb3A.t06-thin90.a2m.gz # 1mb3A.t06-thin90.a2m with 13531 sequences, total weight= 13531 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25637 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mb3A/info/1mb3A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mb3A/nostruct-align/1mb3A.t06-thin90.a2m.gz, have 46615 columns in 201 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vqqA/nostruct-align/1vqqA.t06-thin90.a2m.gz # 1vqqA.t06-thin90.a2m with 1840 sequences, total weight= 1840 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17081 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vqqA/info/1vqqA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vqqA/nostruct-align/1vqqA.t06-thin90.a2m.gz, have 47250 columns in 202 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p1jA/nostruct-align/1p1jA.t06-thin90.a2m.gz # 1p1jA.t06-thin90.a2m with 128 sequences, total weight= 30.1896 avg weight= 0.235857 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p1jA/info/1p1jA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p1jA/nostruct-align/1p1jA.t06-thin90.a2m.gz, have 47775 columns in 203 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/4u/4ubpB/nostruct-align/4ubpB.t06-thin90.a2m.gz # 4ubpB.t06-thin90.a2m with 170 sequences, total weight= 8.5199 avg weight= 0.050117 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/4u/4ubpB/info/4ubpB.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/4u/4ubpB/nostruct-align/4ubpB.t06-thin90.a2m.gz, have 47897 columns in 204 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vhtA/nostruct-align/1vhtA.t06-thin90.a2m.gz # 1vhtA.t06-thin90.a2m with 4065 sequences, total weight= 4065 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.877067 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vhtA/info/1vhtA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vhtA/nostruct-align/1vhtA.t06-thin90.a2m.gz, have 48105 columns in 205 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nrzA/nostruct-align/1nrzA.t06-thin90.a2m.gz # 1nrzA.t06-thin90.a2m with 160 sequences, total weight= 30.3381 avg weight= 0.189613 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nrzA/info/1nrzA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nrzA/nostruct-align/1nrzA.t06-thin90.a2m.gz, have 48268 columns in 206 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kfcA/nostruct-align/1kfcA.t06-thin90.a2m.gz # 1kfcA.t06-thin90.a2m with 478 sequences, total weight= 334.131 avg weight= 0.699019 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3048 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kfcA/info/1kfcA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kfcA/nostruct-align/1kfcA.t06-thin90.a2m.gz, have 48522 columns in 207 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1ve2A/nostruct-align/1ve2A.t06-thin90.a2m.gz # 1ve2A.t06-thin90.a2m with 1678 sequences, total weight= 1678 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1575 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1ve2A/info/1ve2A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1ve2A/nostruct-align/1ve2A.t06-thin90.a2m.gz, have 48744 columns in 208 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hw1A/nostruct-align/1hw1A.t06-thin90.a2m.gz # 1hw1A.t06-thin90.a2m with 3519 sequences, total weight= 3519 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.938715 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hw1A/info/1hw1A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hw1A/nostruct-align/1hw1A.t06-thin90.a2m.gz, have 48970 columns in 209 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k4iA/nostruct-align/1k4iA.t06-thin90.a2m.gz # 1k4iA.t06-thin90.a2m with 372 sequences, total weight= 15.9418 avg weight= 0.0428543 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k4iA/info/1k4iA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k4iA/nostruct-align/1k4iA.t06-thin90.a2m.gz, have 49186 columns in 210 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w0hA/nostruct-align/1w0hA.t06-thin90.a2m.gz # 1w0hA.t06-thin90.a2m with 1509 sequences, total weight= 1509 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01523 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w0hA/info/1w0hA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w0hA/nostruct-align/1w0hA.t06-thin90.a2m.gz, have 49386 columns in 211 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n0qA/nostruct-align/1n0qA.t06-thin90.a2m.gz # 1n0qA.t06-thin90.a2m with 9984 sequences, total weight= 9984 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19475 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n0qA/info/1n0qA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n0qA/nostruct-align/1n0qA.t06-thin90.a2m.gz, have 49477 columns in 212 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1utg/nostruct-align/1utg.t06-thin90.a2m.gz # 1utg.t06-thin90.a2m with 14 sequences, total weight= 4.10303 avg weight= 0.293074 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1utg/info/1utg.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1utg/nostruct-align/1utg.t06-thin90.a2m.gz, have 49547 columns in 213 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jm1A/nostruct-align/1jm1A.t06-thin90.a2m.gz # 1jm1A.t06-thin90.a2m with 1194 sequences, total weight= 1194 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03377 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jm1A/info/1jm1A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jm1A/nostruct-align/1jm1A.t06-thin90.a2m.gz, have 49749 columns in 214 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fna/nostruct-align/1fna.t06-thin90.a2m.gz # 1fna.t06-thin90.a2m with 3992 sequences, total weight= 3992 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06736 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fna/info/1fna.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fna/nostruct-align/1fna.t06-thin90.a2m.gz, have 49840 columns in 215 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k7cA/nostruct-align/1k7cA.t06-thin90.a2m.gz # 1k7cA.t06-thin90.a2m with 1463 sequences, total weight= 1463 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.798474 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k7cA/info/1k7cA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k7cA/nostruct-align/1k7cA.t06-thin90.a2m.gz, have 50073 columns in 216 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t8kA/nostruct-align/1t8kA.t06-thin90.a2m.gz # 1t8kA.t06-thin90.a2m with 502 sequences, total weight= 48.2195 avg weight= 0.0960549 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30105 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t8kA/info/1t8kA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t8kA/nostruct-align/1t8kA.t06-thin90.a2m.gz, have 50150 columns in 217 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1ml4A/nostruct-align/1ml4A.t06-thin90.a2m.gz # 1ml4A.t06-thin90.a2m with 820 sequences, total weight= 44.5229 avg weight= 0.0542963 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30066 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1ml4A/info/1ml4A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1ml4A/nostruct-align/1ml4A.t06-thin90.a2m.gz, have 50457 columns in 218 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ucsA/nostruct-align/1ucsA.t06-thin90.a2m.gz # 1ucsA.t06-thin90.a2m with 19 sequences, total weight= 4.6881 avg weight= 0.246742 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ucsA/info/1ucsA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ucsA/nostruct-align/1ucsA.t06-thin90.a2m.gz, have 50521 columns in 219 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eg2A/nostruct-align/1eg2A.t06-thin90.a2m.gz # 1eg2A.t06-thin90.a2m with 765 sequences, total weight= 765 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.999993 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eg2A/info/1eg2A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1eg2A/nostruct-align/1eg2A.t06-thin90.a2m.gz, have 50791 columns in 220 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ymkA/nostruct-align/1ymkA.t06-thin90.a2m.gz # 1ymkA.t06-thin90.a2m with 2784 sequences, total weight= 2784 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.899711 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ymkA/info/1ymkA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1ymkA/nostruct-align/1ymkA.t06-thin90.a2m.gz, have 50962 columns in 221 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sdiA/nostruct-align/1sdiA.t06-thin90.a2m.gz # 1sdiA.t06-thin90.a2m with 62 sequences, total weight= 13.6424 avg weight= 0.220039 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sdiA/info/1sdiA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sdiA/nostruct-align/1sdiA.t06-thin90.a2m.gz, have 51175 columns in 222 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n40A/nostruct-align/1n40A.t06-thin90.a2m.gz # 1n40A.t06-thin90.a2m with 5640 sequences, total weight= 5640 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01026 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n40A/info/1n40A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n40A/nostruct-align/1n40A.t06-thin90.a2m.gz, have 51569 columns in 223 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e58A/nostruct-align/1e58A.t06-thin90.a2m.gz # 1e58A.t06-thin90.a2m with 1818 sequences, total weight= 1818 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.992746 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e58A/info/1e58A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e58A/nostruct-align/1e58A.t06-thin90.a2m.gz, have 51816 columns in 224 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kq3A/nostruct-align/1kq3A.t06-thin90.a2m.gz # 1kq3A.t06-thin90.a2m with 1361 sequences, total weight= 1361 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13752 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kq3A/info/1kq3A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kq3A/nostruct-align/1kq3A.t06-thin90.a2m.gz, have 52180 columns in 225 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nvmA/nostruct-align/1nvmA.t06-thin90.a2m.gz # 1nvmA.t06-thin90.a2m with 1183 sequences, total weight= 760.082 avg weight= 0.642504 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30995 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nvmA/info/1nvmA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nvmA/nostruct-align/1nvmA.t06-thin90.a2m.gz, have 52520 columns in 226 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kugA/nostruct-align/1kugA.t06-thin90.a2m.gz # 1kugA.t06-thin90.a2m with 587 sequences, total weight= 587 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17722 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kugA/info/1kugA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kugA/nostruct-align/1kugA.t06-thin90.a2m.gz, have 52721 columns in 227 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wubA/nostruct-align/1wubA.t06-thin90.a2m.gz # 1wubA.t06-thin90.a2m with 366 sequences, total weight= 366 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26855 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wubA/info/1wubA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wubA/nostruct-align/1wubA.t06-thin90.a2m.gz, have 52897 columns in 228 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1umgA/nostruct-align/1umgA.t06-thin90.a2m.gz # 1umgA.t06-thin90.a2m with 29 sequences, total weight= 4.07807 avg weight= 0.140623 20 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1umgA/info/1umgA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1umgA/nostruct-align/1umgA.t06-thin90.a2m.gz, have 53256 columns in 229 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gkpA/nostruct-align/1gkpA.t06-thin90.a2m.gz # 1gkpA.t06-thin90.a2m with 3064 sequences, total weight= 3064 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.889415 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gkpA/info/1gkpA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gkpA/nostruct-align/1gkpA.t06-thin90.a2m.gz, have 53714 columns in 230 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lwbA/nostruct-align/1lwbA.t06-thin90.a2m.gz # 1lwbA.t06-thin90.a2m with 26 sequences, total weight= 21.1829 avg weight= 0.814726 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lwbA/info/1lwbA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lwbA/nostruct-align/1lwbA.t06-thin90.a2m.gz, have 53836 columns in 231 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w6sA/nostruct-align/1w6sA.t06-thin90.a2m.gz # 1w6sA.t06-thin90.a2m with 1223 sequences, total weight= 1223 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.919536 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w6sA/info/1w6sA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w6sA/nostruct-align/1w6sA.t06-thin90.a2m.gz, have 54431 columns in 232 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gnlA/nostruct-align/1gnlA.t06-thin90.a2m.gz # 1gnlA.t06-thin90.a2m with 176 sequences, total weight= 47.2434 avg weight= 0.268428 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gnlA/info/1gnlA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gnlA/nostruct-align/1gnlA.t06-thin90.a2m.gz, have 54974 columns in 233 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nls/nostruct-align/1nls.t06-thin90.a2m.gz # 1nls.t06-thin90.a2m with 538 sequences, total weight= 186.058 avg weight= 0.345833 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30428 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nls/info/1nls.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nls/nostruct-align/1nls.t06-thin90.a2m.gz, have 55211 columns in 234 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wr8A/nostruct-align/1wr8A.t06-thin90.a2m.gz # 1wr8A.t06-thin90.a2m with 5472 sequences, total weight= 5472 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.928799 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wr8A/info/1wr8A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wr8A/nostruct-align/1wr8A.t06-thin90.a2m.gz, have 55441 columns in 235 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mtzA/nostruct-align/1mtzA.t06-thin90.a2m.gz # 1mtzA.t06-thin90.a2m with 10153 sequences, total weight= 10153 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.676795 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mtzA/info/1mtzA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mtzA/nostruct-align/1mtzA.t06-thin90.a2m.gz, have 55731 columns in 236 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gu2A/nostruct-align/1gu2A.t06-thin90.a2m.gz # 1gu2A.t06-thin90.a2m with 18 sequences, total weight= 9.18377 avg weight= 0.510209 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gu2A/info/1gu2A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gu2A/nostruct-align/1gu2A.t06-thin90.a2m.gz, have 55855 columns in 237 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2m/2mhr/nostruct-align/2mhr.t06-thin90.a2m.gz # 2mhr.t06-thin90.a2m with 273 sequences, total weight= 273 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21207 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2m/2mhr/info/2mhr.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/2m/2mhr/nostruct-align/2mhr.t06-thin90.a2m.gz, have 55973 columns in 238 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yn9A/nostruct-align/1yn9A.t06-thin90.a2m.gz # 1yn9A.t06-thin90.a2m with 2178 sequences, total weight= 2178 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.964068 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yn9A/info/1yn9A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1yn9A/nostruct-align/1yn9A.t06-thin90.a2m.gz, have 56141 columns in 239 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wl4A/nostruct-align/1wl4A.t06-thin90.a2m.gz # 1wl4A.t06-thin90.a2m with 2564 sequences, total weight= 2564 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23892 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wl4A/info/1wl4A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wl4A/nostruct-align/1wl4A.t06-thin90.a2m.gz, have 56535 columns in 240 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uxaA/nostruct-align/1uxaA.t06-thin90.a2m.gz # 1uxaA.t06-thin90.a2m with 59 sequences, total weight= 16.9039 avg weight= 0.286507 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uxaA/info/1uxaA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uxaA/nostruct-align/1uxaA.t06-thin90.a2m.gz, have 56720 columns in 241 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xrkA/nostruct-align/1xrkA.t06-thin90.a2m.gz # 1xrkA.t06-thin90.a2m with 3484 sequences, total weight= 3484 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.887937 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xrkA/info/1xrkA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xrkA/nostruct-align/1xrkA.t06-thin90.a2m.gz, have 56840 columns in 242 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dozA/nostruct-align/1dozA.t06-thin90.a2m.gz # 1dozA.t06-thin90.a2m with 394 sequences, total weight= 149.036 avg weight= 0.378264 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30695 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dozA/info/1dozA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dozA/nostruct-align/1dozA.t06-thin90.a2m.gz, have 57149 columns in 243 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lfpA/nostruct-align/1lfpA.t06-thin90.a2m.gz # 1lfpA.t06-thin90.a2m with 356 sequences, total weight= 23.3325 avg weight= 0.0655407 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lfpA/info/1lfpA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lfpA/nostruct-align/1lfpA.t06-thin90.a2m.gz, have 57392 columns in 244 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xttA/nostruct-align/1xttA.t06-thin90.a2m.gz # 1xttA.t06-thin90.a2m with 695 sequences, total weight= 590.42 avg weight= 0.849526 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3029 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xttA/info/1xttA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xttA/nostruct-align/1xttA.t06-thin90.a2m.gz, have 57607 columns in 245 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yd0A/nostruct-align/1yd0A.t06-thin90.a2m.gz # 1yd0A.t06-thin90.a2m with 408 sequences, total weight= 27.7187 avg weight= 0.067938 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yd0A/info/1yd0A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1yd0A/nostruct-align/1yd0A.t06-thin90.a2m.gz, have 57696 columns in 246 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1syyA/nostruct-align/1syyA.t06-thin90.a2m.gz # 1syyA.t06-thin90.a2m with 441 sequences, total weight= 441 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22389 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1syyA/info/1syyA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1syyA/nostruct-align/1syyA.t06-thin90.a2m.gz, have 58013 columns in 247 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hnjA/nostruct-align/1hnjA.t06-thin90.a2m.gz # 1hnjA.t06-thin90.a2m with 2849 sequences, total weight= 2849 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07021 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hnjA/info/1hnjA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hnjA/nostruct-align/1hnjA.t06-thin90.a2m.gz, have 58330 columns in 248 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r7jA/nostruct-align/1r7jA.t06-thin90.a2m.gz # 1r7jA.t06-thin90.a2m with 36 sequences, total weight= 26.3242 avg weight= 0.731229 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r7jA/info/1r7jA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r7jA/nostruct-align/1r7jA.t06-thin90.a2m.gz, have 58420 columns in 249 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jfbA/nostruct-align/1jfbA.t06-thin90.a2m.gz # 1jfbA.t06-thin90.a2m with 5679 sequences, total weight= 5679 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00633 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jfbA/info/1jfbA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jfbA/nostruct-align/1jfbA.t06-thin90.a2m.gz, have 58819 columns in 250 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o7iA/nostruct-align/1o7iA.t06-thin90.a2m.gz # 1o7iA.t06-thin90.a2m with 175 sequences, total weight= 175 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22661 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o7iA/info/1o7iA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o7iA/nostruct-align/1o7iA.t06-thin90.a2m.gz, have 58934 columns in 251 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j1yA/nostruct-align/1j1yA.t06-thin90.a2m.gz # 1j1yA.t06-thin90.a2m with 1628 sequences, total weight= 1628 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00517 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j1yA/info/1j1yA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j1yA/nostruct-align/1j1yA.t06-thin90.a2m.gz, have 59050 columns in 252 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oz2A/nostruct-align/1oz2A.t06-thin90.a2m.gz # 1oz2A.t06-thin90.a2m with 119 sequences, total weight= 32.6937 avg weight= 0.274737 41 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oz2A/info/1oz2A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oz2A/nostruct-align/1oz2A.t06-thin90.a2m.gz, have 59374 columns in 253 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f8eA/nostruct-align/1f8eA.t06-thin90.a2m.gz # 1f8eA.t06-thin90.a2m with 72 sequences, total weight= 5.74265 avg weight= 0.079759 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f8eA/info/1f8eA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f8eA/nostruct-align/1f8eA.t06-thin90.a2m.gz, have 59762 columns in 254 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xpcA/nostruct-align/1xpcA.t06-thin90.a2m.gz # 1xpcA.t06-thin90.a2m with 1057 sequences, total weight= 1057 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.957772 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xpcA/info/1xpcA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xpcA/nostruct-align/1xpcA.t06-thin90.a2m.gz, have 60007 columns in 255 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vr8A/nostruct-align/1vr8A.t06-thin90.a2m.gz # 1vr8A.t06-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.595407 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vr8A/info/1vr8A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vr8A/nostruct-align/1vr8A.t06-thin90.a2m.gz, have 60142 columns in 256 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kzqA/nostruct-align/1kzqA.t06-thin90.a2m.gz # 1kzqA.t06-thin90.a2m with 32 sequences, total weight= 26.2513 avg weight= 0.820354 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kzqA/info/1kzqA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kzqA/nostruct-align/1kzqA.t06-thin90.a2m.gz, have 60395 columns in 257 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t9hA/nostruct-align/1t9hA.t06-thin90.a2m.gz # 1t9hA.t06-thin90.a2m with 2930 sequences, total weight= 2930 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07649 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t9hA/info/1t9hA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t9hA/nostruct-align/1t9hA.t06-thin90.a2m.gz, have 60682 columns in 258 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yxyA/nostruct-align/1yxyA.t06-thin90.a2m.gz # 1yxyA.t06-thin90.a2m with 4756 sequences, total weight= 4756 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.960551 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yxyA/info/1yxyA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1yxyA/nostruct-align/1yxyA.t06-thin90.a2m.gz, have 60912 columns in 259 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m1nB/nostruct-align/1m1nB.t06-thin90.a2m.gz # 1m1nB.t06-thin90.a2m with 674 sequences, total weight= 674 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23932 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m1nB/info/1m1nB.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m1nB/nostruct-align/1m1nB.t06-thin90.a2m.gz, have 61434 columns in 260 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qw2A/nostruct-align/1qw2A.t06-thin90.a2m.gz # 1qw2A.t06-thin90.a2m with 23 sequences, total weight= 9.7195 avg weight= 0.422587 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qw2A/info/1qw2A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qw2A/nostruct-align/1qw2A.t06-thin90.a2m.gz, have 61536 columns in 261 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ufoA/nostruct-align/1ufoA.t06-thin90.a2m.gz # 1ufoA.t06-thin90.a2m with 14463 sequences, total weight= 14463 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.743631 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ufoA/info/1ufoA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ufoA/nostruct-align/1ufoA.t06-thin90.a2m.gz, have 61774 columns in 262 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vkfA/nostruct-align/1vkfA.t06-thin90.a2m.gz # 1vkfA.t06-thin90.a2m with 38 sequences, total weight= 10.3638 avg weight= 0.27273 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vkfA/info/1vkfA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vkfA/nostruct-align/1vkfA.t06-thin90.a2m.gz, have 61946 columns in 263 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nszA/nostruct-align/1nszA.t06-thin90.a2m.gz # 1nszA.t06-thin90.a2m with 582 sequences, total weight= 582 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14034 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nszA/info/1nszA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nszA/nostruct-align/1nszA.t06-thin90.a2m.gz, have 62286 columns in 264 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dd9A/nostruct-align/1dd9A.t06-thin90.a2m.gz # 1dd9A.t06-thin90.a2m with 650 sequences, total weight= 650 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0808 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dd9A/info/1dd9A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dd9A/nostruct-align/1dd9A.t06-thin90.a2m.gz, have 62596 columns in 265 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iuaA/nostruct-align/1iuaA.t06-thin90.a2m.gz # 1iuaA.t06-thin90.a2m with 57 sequences, total weight= 26.3972 avg weight= 0.463108 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iuaA/info/1iuaA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iuaA/nostruct-align/1iuaA.t06-thin90.a2m.gz, have 62679 columns in 266 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lqtA/nostruct-align/1lqtA.t06-thin90.a2m.gz # 1lqtA.t06-thin90.a2m with 11192 sequences, total weight= 11192 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.878245 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lqtA/info/1lqtA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lqtA/nostruct-align/1lqtA.t06-thin90.a2m.gz, have 63131 columns in 267 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mml/nostruct-align/1mml.t06-thin90.a2m.gz # 1mml.t06-thin90.a2m with 198 sequences, total weight= 4.74042 avg weight= 0.0239415 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mml/info/1mml.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mml/nostruct-align/1mml.t06-thin90.a2m.gz, have 63382 columns in 268 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y93A/nostruct-align/1y93A.t06-thin90.a2m.gz # 1y93A.t06-thin90.a2m with 538 sequences, total weight= 538 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1474 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y93A/info/1y93A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1y93A/nostruct-align/1y93A.t06-thin90.a2m.gz, have 63540 columns in 269 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i2kA/nostruct-align/1i2kA.t06-thin90.a2m.gz # 1i2kA.t06-thin90.a2m with 938 sequences, total weight= 938 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21051 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i2kA/info/1i2kA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i2kA/nostruct-align/1i2kA.t06-thin90.a2m.gz, have 63809 columns in 270 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x6zA/nostruct-align/1x6zA.t06-thin90.a2m.gz # 1x6zA.t06-thin90.a2m with 218 sequences, total weight= 92.5389 avg weight= 0.42449 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30099 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x6zA/info/1x6zA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1x6zA/nostruct-align/1x6zA.t06-thin90.a2m.gz, have 63928 columns in 271 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wwzA/nostruct-align/1wwzA.t06-thin90.a2m.gz # 1wwzA.t06-thin90.a2m with 8197 sequences, total weight= 8197 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.760452 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wwzA/info/1wwzA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wwzA/nostruct-align/1wwzA.t06-thin90.a2m.gz, have 64085 columns in 272 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1amf/nostruct-align/1amf.t06-thin90.a2m.gz # 1amf.t06-thin90.a2m with 2786 sequences, total weight= 2786 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.866945 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1amf/info/1amf.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1amf/nostruct-align/1amf.t06-thin90.a2m.gz, have 64316 columns in 273 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nogA/nostruct-align/1nogA.t06-thin90.a2m.gz # 1nogA.t06-thin90.a2m with 220 sequences, total weight= 22.9229 avg weight= 0.104195 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nogA/info/1nogA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nogA/nostruct-align/1nogA.t06-thin90.a2m.gz, have 64465 columns in 274 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kid/nostruct-align/1kid.t06-thin90.a2m.gz # 1kid.t06-thin90.a2m with 657 sequences, total weight= 20.588 avg weight= 0.0313363 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kid/info/1kid.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kid/nostruct-align/1kid.t06-thin90.a2m.gz, have 64658 columns in 275 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ryqA/nostruct-align/1ryqA.t06-thin90.a2m.gz # 1ryqA.t06-thin90.a2m with 64 sequences, total weight= 13.4643 avg weight= 0.21038 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ryqA/info/1ryqA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1ryqA/nostruct-align/1ryqA.t06-thin90.a2m.gz, have 64722 columns in 276 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n4wA/nostruct-align/1n4wA.t06-thin90.a2m.gz # 1n4wA.t06-thin90.a2m with 7677 sequences, total weight= 7677 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.656873 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n4wA/info/1n4wA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n4wA/nostruct-align/1n4wA.t06-thin90.a2m.gz, have 65220 columns in 277 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e7lA/nostruct-align/1e7lA.t06-thin90.a2m.gz # 1e7lA.t06-thin90.a2m with 34 sequences, total weight= 30.1538 avg weight= 0.886877 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e7lA/info/1e7lA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e7lA/nostruct-align/1e7lA.t06-thin90.a2m.gz, have 65377 columns in 278 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jyeA/nostruct-align/1jyeA.t06-thin90.a2m.gz # 1jyeA.t06-thin90.a2m with 2729 sequences, total weight= 2729 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.989021 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jyeA/info/1jyeA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jyeA/nostruct-align/1jyeA.t06-thin90.a2m.gz, have 65648 columns in 279 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g66A/nostruct-align/1g66A.t06-thin90.a2m.gz # 1g66A.t06-thin90.a2m with 385 sequences, total weight= 385 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03542 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g66A/info/1g66A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g66A/nostruct-align/1g66A.t06-thin90.a2m.gz, have 65855 columns in 280 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/19/19hcA/nostruct-align/19hcA.t06-thin90.a2m.gz # 19hcA.t06-thin90.a2m with 1124 sequences, total weight= 1124 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03116 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/19/19hcA/info/19hcA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/19/19hcA/nostruct-align/19hcA.t06-thin90.a2m.gz, have 66147 columns in 281 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bebA/nostruct-align/1bebA.t06-thin90.a2m.gz # 1bebA.t06-thin90.a2m with 549 sequences, total weight= 549 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02728 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bebA/info/1bebA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bebA/nostruct-align/1bebA.t06-thin90.a2m.gz, have 66303 columns in 282 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ii5A/nostruct-align/1ii5A.t06-thin90.a2m.gz # 1ii5A.t06-thin90.a2m with 3290 sequences, total weight= 3290 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.92216 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ii5A/info/1ii5A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ii5A/nostruct-align/1ii5A.t06-thin90.a2m.gz, have 66524 columns in 283 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wmzA/nostruct-align/1wmzA.t06-thin90.a2m.gz # 1wmzA.t06-thin90.a2m with 2213 sequences, total weight= 2213 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00024 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wmzA/info/1wmzA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wmzA/nostruct-align/1wmzA.t06-thin90.a2m.gz, have 66664 columns in 284 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oafA/nostruct-align/1oafA.t06-thin90.a2m.gz # 1oafA.t06-thin90.a2m with 1047 sequences, total weight= 71.3441 avg weight= 0.0681415 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3027 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oafA/info/1oafA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oafA/nostruct-align/1oafA.t06-thin90.a2m.gz, have 66914 columns in 285 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i0rA/nostruct-align/1i0rA.t06-thin90.a2m.gz # 1i0rA.t06-thin90.a2m with 732 sequences, total weight= 732 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20434 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i0rA/info/1i0rA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i0rA/nostruct-align/1i0rA.t06-thin90.a2m.gz, have 67075 columns in 286 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yocA/nostruct-align/1yocA.t06-thin90.a2m.gz # 1yocA.t06-thin90.a2m with 1089 sequences, total weight= 1089 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00929 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yocA/info/1yocA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1yocA/nostruct-align/1yocA.t06-thin90.a2m.gz, have 67220 columns in 287 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nbuA/nostruct-align/1nbuA.t06-thin90.a2m.gz # 1nbuA.t06-thin90.a2m with 361 sequences, total weight= 153.613 avg weight= 0.42552 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30792 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nbuA/info/1nbuA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nbuA/nostruct-align/1nbuA.t06-thin90.a2m.gz, have 67338 columns in 288 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d02A/nostruct-align/1d02A.t06-thin90.a2m.gz # 1d02A.t06-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.615068 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d02A/info/1d02A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d02A/nostruct-align/1d02A.t06-thin90.a2m.gz, have 67535 columns in 289 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vl1A/nostruct-align/1vl1A.t06-thin90.a2m.gz # 1vl1A.t06-thin90.a2m with 529 sequences, total weight= 115.329 avg weight= 0.218013 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30455 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vl1A/info/1vl1A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vl1A/nostruct-align/1vl1A.t06-thin90.a2m.gz, have 67753 columns in 290 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cqmA/nostruct-align/1cqmA.t06-thin90.a2m.gz # 1cqmA.t06-thin90.a2m with 313 sequences, total weight= 74.2953 avg weight= 0.237365 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30253 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cqmA/info/1cqmA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cqmA/nostruct-align/1cqmA.t06-thin90.a2m.gz, have 67851 columns in 291 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1io7A/nostruct-align/1io7A.t06-thin90.a2m.gz # 1io7A.t06-thin90.a2m with 5557 sequences, total weight= 5557 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.994687 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1io7A/info/1io7A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1io7A/nostruct-align/1io7A.t06-thin90.a2m.gz, have 68217 columns in 292 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uwwA/nostruct-align/1uwwA.t06-thin90.a2m.gz # 1uwwA.t06-thin90.a2m with 23 sequences, total weight= 12.1548 avg weight= 0.528469 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uwwA/info/1uwwA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uwwA/nostruct-align/1uwwA.t06-thin90.a2m.gz, have 68401 columns in 293 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iktA/nostruct-align/1iktA.t06-thin90.a2m.gz # 1iktA.t06-thin90.a2m with 199 sequences, total weight= 199 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27327 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iktA/info/1iktA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iktA/nostruct-align/1iktA.t06-thin90.a2m.gz, have 68516 columns in 294 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yqhA/nostruct-align/1yqhA.t06-thin90.a2m.gz # 1yqhA.t06-thin90.a2m with 135 sequences, total weight= 43.4916 avg weight= 0.32216 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yqhA/info/1yqhA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1yqhA/nostruct-align/1yqhA.t06-thin90.a2m.gz, have 68620 columns in 295 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j8rA/nostruct-align/1j8rA.t06-thin90.a2m.gz # 1j8rA.t06-thin90.a2m with 5 sequences, total weight= 3.50337 avg weight= 0.700675 13 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j8rA/info/1j8rA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j8rA/nostruct-align/1j8rA.t06-thin90.a2m.gz, have 68816 columns in 296 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gweA/nostruct-align/1gweA.t06-thin90.a2m.gz # 1gweA.t06-thin90.a2m with 535 sequences, total weight= 61.9882 avg weight= 0.115866 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30041 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gweA/info/1gweA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gweA/nostruct-align/1gweA.t06-thin90.a2m.gz, have 69314 columns in 297 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ispA/nostruct-align/1ispA.t06-thin90.a2m.gz # 1ispA.t06-thin90.a2m with 10748 sequences, total weight= 10748 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.8402 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ispA/info/1ispA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ispA/nostruct-align/1ispA.t06-thin90.a2m.gz, have 69493 columns in 298 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nrvA/nostruct-align/1nrvA.t06-thin90.a2m.gz # 1nrvA.t06-thin90.a2m with 861 sequences, total weight= 823.574 avg weight= 0.956532 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30108 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nrvA/info/1nrvA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nrvA/nostruct-align/1nrvA.t06-thin90.a2m.gz, have 69593 columns in 299 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cs1A/nostruct-align/1cs1A.t06-thin90.a2m.gz # 1cs1A.t06-thin90.a2m with 9664 sequences, total weight= 9664 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.89028 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cs1A/info/1cs1A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cs1A/nostruct-align/1cs1A.t06-thin90.a2m.gz, have 69977 columns in 300 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bdmA/nostruct-align/1bdmA.t06-thin90.a2m.gz # 1bdmA.t06-thin90.a2m with 2861 sequences, total weight= 2861 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03713 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bdmA/info/1bdmA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bdmA/nostruct-align/1bdmA.t06-thin90.a2m.gz, have 70294 columns in 301 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lc5A/nostruct-align/1lc5A.t06-thin90.a2m.gz # 1lc5A.t06-thin90.a2m with 8911 sequences, total weight= 8911 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.914124 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lc5A/info/1lc5A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lc5A/nostruct-align/1lc5A.t06-thin90.a2m.gz, have 70649 columns in 302 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w2fA/nostruct-align/1w2fA.t06-thin90.a2m.gz # 1w2fA.t06-thin90.a2m with 175 sequences, total weight= 175 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27761 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w2fA/info/1w2fA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w2fA/nostruct-align/1w2fA.t06-thin90.a2m.gz, have 70925 columns in 303 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1je0A/nostruct-align/1je0A.t06-thin90.a2m.gz # 1je0A.t06-thin90.a2m with 1178 sequences, total weight= 1178 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03563 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1je0A/info/1je0A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1je0A/nostruct-align/1je0A.t06-thin90.a2m.gz, have 71151 columns in 304 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iab/nostruct-align/1iab.t06-thin90.a2m.gz # 1iab.t06-thin90.a2m with 511 sequences, total weight= 511 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23979 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iab/info/1iab.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iab/nostruct-align/1iab.t06-thin90.a2m.gz, have 71351 columns in 305 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gnyA/nostruct-align/1gnyA.t06-thin90.a2m.gz # 1gnyA.t06-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13668 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gnyA/info/1gnyA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gnyA/nostruct-align/1gnyA.t06-thin90.a2m.gz, have 71504 columns in 306 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y9iA/nostruct-align/1y9iA.t06-thin90.a2m.gz # 1y9iA.t06-thin90.a2m with 204 sequences, total weight= 66.5871 avg weight= 0.326407 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30088 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y9iA/info/1y9iA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1y9iA/nostruct-align/1y9iA.t06-thin90.a2m.gz, have 71663 columns in 307 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1na3A/nostruct-align/1na3A.t06-thin90.a2m.gz # 1na3A.t06-thin90.a2m with 9217 sequences, total weight= 9217 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.973744 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1na3A/info/1na3A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1na3A/nostruct-align/1na3A.t06-thin90.a2m.gz, have 71749 columns in 308 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m6sA/nostruct-align/1m6sA.t06-thin90.a2m.gz # 1m6sA.t06-thin90.a2m with 12576 sequences, total weight= 12576 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.862681 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m6sA/info/1m6sA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m6sA/nostruct-align/1m6sA.t06-thin90.a2m.gz, have 72092 columns in 309 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lb6A/nostruct-align/1lb6A.t06-thin90.a2m.gz # 1lb6A.t06-thin90.a2m with 241 sequences, total weight= 241 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22467 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lb6A/info/1lb6A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lb6A/nostruct-align/1lb6A.t06-thin90.a2m.gz, have 72247 columns in 310 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1ga6A/nostruct-align/1ga6A.t06-thin90.a2m.gz # 1ga6A.t06-thin90.a2m with 1700 sequences, total weight= 1700 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0979 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1ga6A/info/1ga6A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1ga6A/nostruct-align/1ga6A.t06-thin90.a2m.gz, have 72616 columns in 311 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1agjA/nostruct-align/1agjA.t06-thin90.a2m.gz # 1agjA.t06-thin90.a2m with 4699 sequences, total weight= 4699 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.980716 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1agjA/info/1agjA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1agjA/nostruct-align/1agjA.t06-thin90.a2m.gz, have 72858 columns in 312 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g4yB/nostruct-align/1g4yB.t06-thin90.a2m.gz # 1g4yB.t06-thin90.a2m with 26 sequences, total weight= 5.9791 avg weight= 0.229965 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g4yB/info/1g4yB.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g4yB/nostruct-align/1g4yB.t06-thin90.a2m.gz, have 72939 columns in 313 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tzpA/nostruct-align/1tzpA.t06-thin90.a2m.gz # 1tzpA.t06-thin90.a2m with 61 sequences, total weight= 14.8622 avg weight= 0.243642 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tzpA/info/1tzpA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tzpA/nostruct-align/1tzpA.t06-thin90.a2m.gz, have 73179 columns in 314 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vie/nostruct-align/1vie.t06-thin90.a2m.gz # 1vie.t06-thin90.a2m with 3 sequences, total weight= 1.86591 avg weight= 0.621969 10 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vie/info/1vie.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vie/nostruct-align/1vie.t06-thin90.a2m.gz, have 73239 columns in 315 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dk0A/nostruct-align/1dk0A.t06-thin90.a2m.gz # 1dk0A.t06-thin90.a2m with 18 sequences, total weight= 8.40107 avg weight= 0.466726 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dk0A/info/1dk0A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dk0A/nostruct-align/1dk0A.t06-thin90.a2m.gz, have 73412 columns in 316 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l8rA/nostruct-align/1l8rA.t06-thin90.a2m.gz # 1l8rA.t06-thin90.a2m with 18 sequences, total weight= 3.20117 avg weight= 0.177843 15 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l8rA/info/1l8rA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1l8rA/nostruct-align/1l8rA.t06-thin90.a2m.gz, have 73513 columns in 317 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h7cA/nostruct-align/1h7cA.t06-thin90.a2m.gz # 1h7cA.t06-thin90.a2m with 50 sequences, total weight= 24.8968 avg weight= 0.497936 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h7cA/info/1h7cA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h7cA/nostruct-align/1h7cA.t06-thin90.a2m.gz, have 73616 columns in 318 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kveB/nostruct-align/1kveB.t06-thin90.a2m.gz # 1kveB.t06-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.649556 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kveB/info/1kveB.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kveB/nostruct-align/1kveB.t06-thin90.a2m.gz, have 73693 columns in 319 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1elwA/nostruct-align/1elwA.t06-thin90.a2m.gz # 1elwA.t06-thin90.a2m with 9817 sequences, total weight= 9817 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.911987 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1elwA/info/1elwA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1elwA/nostruct-align/1elwA.t06-thin90.a2m.gz, have 73810 columns in 320 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1aho/nostruct-align/1aho.t06-thin90.a2m.gz # 1aho.t06-thin90.a2m with 126 sequences, total weight= 12.5315 avg weight= 0.0994561 41 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1aho/info/1aho.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1aho/nostruct-align/1aho.t06-thin90.a2m.gz, have 73874 columns in 321 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tvxA/nostruct-align/1tvxA.t06-thin90.a2m.gz # 1tvxA.t06-thin90.a2m with 256 sequences, total weight= 41.941 avg weight= 0.163832 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30045 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tvxA/info/1tvxA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tvxA/nostruct-align/1tvxA.t06-thin90.a2m.gz, have 73938 columns in 322 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rk6A/nostruct-align/1rk6A.t06-thin90.a2m.gz # 1rk6A.t06-thin90.a2m with 3053 sequences, total weight= 3053 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.867314 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rk6A/info/1rk6A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rk6A/nostruct-align/1rk6A.t06-thin90.a2m.gz, have 74412 columns in 323 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w0pA/nostruct-align/1w0pA.t06-thin90.a2m.gz # 1w0pA.t06-thin90.a2m with 1258 sequences, total weight= 1139.52 avg weight= 0.905819 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30113 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w0pA/info/1w0pA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w0pA/nostruct-align/1w0pA.t06-thin90.a2m.gz, have 75165 columns in 324 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o9iA/nostruct-align/1o9iA.t06-thin90.a2m.gz # 1o9iA.t06-thin90.a2m with 92 sequences, total weight= 27.2323 avg weight= 0.296003 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o9iA/info/1o9iA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o9iA/nostruct-align/1o9iA.t06-thin90.a2m.gz, have 75431 columns in 325 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jboA/nostruct-align/1jboA.t06-thin90.a2m.gz # 1jboA.t06-thin90.a2m with 321 sequences, total weight= 43.5905 avg weight= 0.135796 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jboA/info/1jboA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jboA/nostruct-align/1jboA.t06-thin90.a2m.gz, have 75593 columns in 326 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jz8A/nostruct-align/1jz8A.t06-thin90.a2m.gz # 1jz8A.t06-thin90.a2m with 789 sequences, total weight= 789 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13236 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jz8A/info/1jz8A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jz8A/nostruct-align/1jz8A.t06-thin90.a2m.gz, have 76604 columns in 327 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lkkA/nostruct-align/1lkkA.t06-thin90.a2m.gz # 1lkkA.t06-thin90.a2m with 860 sequences, total weight= 860 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29786 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lkkA/info/1lkkA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lkkA/nostruct-align/1lkkA.t06-thin90.a2m.gz, have 76709 columns in 328 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j83A/nostruct-align/1j83A.t06-thin90.a2m.gz # 1j83A.t06-thin90.a2m with 21 sequences, total weight= 8.2562 avg weight= 0.393152 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j83A/info/1j83A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j83A/nostruct-align/1j83A.t06-thin90.a2m.gz, have 76889 columns in 329 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n7oA/nostruct-align/1n7oA.t06-thin90.a2m.gz # 1n7oA.t06-thin90.a2m with 76 sequences, total weight= 76 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13722 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n7oA/info/1n7oA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n7oA/nostruct-align/1n7oA.t06-thin90.a2m.gz, have 77610 columns in 330 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kqfA/nostruct-align/1kqfA.t06-thin90.a2m.gz # 1kqfA.t06-thin90.a2m with 1552 sequences, total weight= 1552 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12973 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kqfA/info/1kqfA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kqfA/nostruct-align/1kqfA.t06-thin90.a2m.gz, have 78592 columns in 331 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mtyB/nostruct-align/1mtyB.t06-thin90.a2m.gz # 1mtyB.t06-thin90.a2m with 142 sequences, total weight= 116.496 avg weight= 0.820396 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mtyB/info/1mtyB.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mtyB/nostruct-align/1mtyB.t06-thin90.a2m.gz, have 78976 columns in 332 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jtgB/nostruct-align/1jtgB.t06-thin90.a2m.gz # 1jtgB.t06-thin90.a2m with 4 sequences, total weight= 4 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1647 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jtgB/info/1jtgB.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jtgB/nostruct-align/1jtgB.t06-thin90.a2m.gz, have 79141 columns in 333 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q4uA/nostruct-align/1q4uA.t06-thin90.a2m.gz # 1q4uA.t06-thin90.a2m with 1477 sequences, total weight= 1477 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.951299 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q4uA/info/1q4uA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q4uA/nostruct-align/1q4uA.t06-thin90.a2m.gz, have 79281 columns in 334 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ujpA/nostruct-align/1ujpA.t06-thin90.a2m.gz # 1ujpA.t06-thin90.a2m with 458 sequences, total weight= 169.301 avg weight= 0.369653 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30718 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ujpA/info/1ujpA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ujpA/nostruct-align/1ujpA.t06-thin90.a2m.gz, have 79524 columns in 335 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h70A/nostruct-align/1h70A.t06-thin90.a2m.gz # 1h70A.t06-thin90.a2m with 464 sequences, total weight= 464 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12878 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h70A/info/1h70A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h70A/nostruct-align/1h70A.t06-thin90.a2m.gz, have 79779 columns in 336 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nkd/nostruct-align/1nkd.t06-thin90.a2m.gz # 1nkd.t06-thin90.a2m with 19 sequences, total weight= 4.25624 avg weight= 0.224012 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nkd/info/1nkd.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nkd/nostruct-align/1nkd.t06-thin90.a2m.gz, have 79838 columns in 337 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xdzA/nostruct-align/1xdzA.t06-thin90.a2m.gz # 1xdzA.t06-thin90.a2m with 8650 sequences, total weight= 8650 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.738903 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xdzA/info/1xdzA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xdzA/nostruct-align/1xdzA.t06-thin90.a2m.gz, have 80076 columns in 338 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iv3A/nostruct-align/1iv3A.t06-thin90.a2m.gz # 1iv3A.t06-thin90.a2m with 277 sequences, total weight= 10.1421 avg weight= 0.0366139 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iv3A/info/1iv3A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iv3A/nostruct-align/1iv3A.t06-thin90.a2m.gz, have 80226 columns in 339 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jatB/nostruct-align/1jatB.t06-thin90.a2m.gz # 1jatB.t06-thin90.a2m with 1035 sequences, total weight= 298.243 avg weight= 0.288158 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31748 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jatB/info/1jatB.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jatB/nostruct-align/1jatB.t06-thin90.a2m.gz, have 80358 columns in 340 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xfiA/nostruct-align/1xfiA.t06-thin90.a2m.gz # 1xfiA.t06-thin90.a2m with 129 sequences, total weight= 129 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20068 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xfiA/info/1xfiA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xfiA/nostruct-align/1xfiA.t06-thin90.a2m.gz, have 80701 columns in 341 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1plc/nostruct-align/1plc.t06-thin90.a2m.gz # 1plc.t06-thin90.a2m with 472 sequences, total weight= 472 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16587 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1plc/info/1plc.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1plc/nostruct-align/1plc.t06-thin90.a2m.gz, have 80800 columns in 342 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jf8A/nostruct-align/1jf8A.t06-thin90.a2m.gz # 1jf8A.t06-thin90.a2m with 758 sequences, total weight= 427.536 avg weight= 0.564032 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31106 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jf8A/info/1jf8A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jf8A/nostruct-align/1jf8A.t06-thin90.a2m.gz, have 80930 columns in 343 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1odmA/nostruct-align/1odmA.t06-thin90.a2m.gz # 1odmA.t06-thin90.a2m with 991 sequences, total weight= 991 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21102 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1odmA/info/1odmA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1odmA/nostruct-align/1odmA.t06-thin90.a2m.gz, have 81259 columns in 344 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ew4A/nostruct-align/1ew4A.t06-thin90.a2m.gz # 1ew4A.t06-thin90.a2m with 117 sequences, total weight= 27.7475 avg weight= 0.237159 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ew4A/info/1ew4A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ew4A/nostruct-align/1ew4A.t06-thin90.a2m.gz, have 81365 columns in 345 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gutA/nostruct-align/1gutA.t06-thin90.a2m.gz # 1gutA.t06-thin90.a2m with 261 sequences, total weight= 22.8828 avg weight= 0.0876735 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gutA/info/1gutA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gutA/nostruct-align/1gutA.t06-thin90.a2m.gz, have 81432 columns in 346 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wz8A/nostruct-align/1wz8A.t06-thin90.a2m.gz # 1wz8A.t06-thin90.a2m with 3065 sequences, total weight= 3065 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18605 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wz8A/info/1wz8A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wz8A/nostruct-align/1wz8A.t06-thin90.a2m.gz, have 81695 columns in 347 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mxrA/nostruct-align/1mxrA.t06-thin90.a2m.gz # 1mxrA.t06-thin90.a2m with 423 sequences, total weight= 423 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24635 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mxrA/info/1mxrA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mxrA/nostruct-align/1mxrA.t06-thin90.a2m.gz, have 82034 columns in 348 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n6aA/nostruct-align/1n6aA.t06-thin90.a2m.gz # 1n6aA.t06-thin90.a2m with 679 sequences, total weight= 679 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.996299 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n6aA/info/1n6aA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n6aA/nostruct-align/1n6aA.t06-thin90.a2m.gz, have 82268 columns in 349 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ecsA/nostruct-align/1ecsA.t06-thin90.a2m.gz # 1ecsA.t06-thin90.a2m with 3217 sequences, total weight= 3217 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.897858 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ecsA/info/1ecsA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ecsA/nostruct-align/1ecsA.t06-thin90.a2m.gz, have 82388 columns in 350 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1of8A/nostruct-align/1of8A.t06-thin90.a2m.gz # 1of8A.t06-thin90.a2m with 625 sequences, total weight= 41.7634 avg weight= 0.0668214 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1of8A/info/1of8A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1of8A/nostruct-align/1of8A.t06-thin90.a2m.gz, have 82727 columns in 351 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f7dA/nostruct-align/1f7dA.t06-thin90.a2m.gz # 1f7dA.t06-thin90.a2m with 737 sequences, total weight= 737 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25888 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f7dA/info/1f7dA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f7dA/nostruct-align/1f7dA.t06-thin90.a2m.gz, have 82845 columns in 352 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lk9A/nostruct-align/1lk9A.t06-thin90.a2m.gz # 1lk9A.t06-thin90.a2m with 7032 sequences, total weight= 7032 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.878213 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lk9A/info/1lk9A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lk9A/nostruct-align/1lk9A.t06-thin90.a2m.gz, have 83270 columns in 353 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pmhX/nostruct-align/1pmhX.t06-thin90.a2m.gz # 1pmhX.t06-thin90.a2m with 17 sequences, total weight= 11.652 avg weight= 0.685409 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pmhX/info/1pmhX.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pmhX/nostruct-align/1pmhX.t06-thin90.a2m.gz, have 83453 columns in 354 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yv4A/nostruct-align/1yv4A.t06-thin90.a2m.gz # 1yv4A.t06-thin90.a2m with 187 sequences, total weight= 21.089 avg weight= 0.112775 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yv4A/info/1yv4A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1yv4A/nostruct-align/1yv4A.t06-thin90.a2m.gz, have 83557 columns in 355 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qz5A/nostruct-align/1qz5A.t06-thin90.a2m.gz # 1qz5A.t06-thin90.a2m with 922 sequences, total weight= 301.369 avg weight= 0.326864 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31444 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qz5A/info/1qz5A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qz5A/nostruct-align/1qz5A.t06-thin90.a2m.gz, have 83916 columns in 356 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h99A/nostruct-align/1h99A.t06-thin90.a2m.gz # 1h99A.t06-thin90.a2m with 348 sequences, total weight= 348 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.999854 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h99A/info/1h99A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h99A/nostruct-align/1h99A.t06-thin90.a2m.gz, have 84136 columns in 357 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c9oA/nostruct-align/1c9oA.t06-thin90.a2m.gz # 1c9oA.t06-thin90.a2m with 920 sequences, total weight= 29.9041 avg weight= 0.0325045 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c9oA/info/1c9oA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1c9oA/nostruct-align/1c9oA.t06-thin90.a2m.gz, have 84202 columns in 358 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yx1A/nostruct-align/1yx1A.t06-thin90.a2m.gz # 1yx1A.t06-thin90.a2m with 1383 sequences, total weight= 1383 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.892928 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yx1A/info/1yx1A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1yx1A/nostruct-align/1yx1A.t06-thin90.a2m.gz, have 84452 columns in 359 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yy6A/nostruct-align/1yy6A.t06-thin90.a2m.gz # 1yy6A.t06-thin90.a2m with 671 sequences, total weight= 671 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04327 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yy6A/info/1yy6A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1yy6A/nostruct-align/1yy6A.t06-thin90.a2m.gz, have 84589 columns in 360 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iq6A/nostruct-align/1iq6A.t06-thin90.a2m.gz # 1iq6A.t06-thin90.a2m with 1220 sequences, total weight= 1220 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09609 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iq6A/info/1iq6A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iq6A/nostruct-align/1iq6A.t06-thin90.a2m.gz, have 84721 columns in 361 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pwxA/nostruct-align/1pwxA.t06-thin90.a2m.gz # 1pwxA.t06-thin90.a2m with 1450 sequences, total weight= 1450 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11703 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pwxA/info/1pwxA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pwxA/nostruct-align/1pwxA.t06-thin90.a2m.gz, have 84973 columns in 362 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x7yA/nostruct-align/1x7yA.t06-thin90.a2m.gz # 1x7yA.t06-thin90.a2m with 2175 sequences, total weight= 2175 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08672 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x7yA/info/1x7yA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1x7yA/nostruct-align/1x7yA.t06-thin90.a2m.gz, have 85342 columns in 363 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rzhH/nostruct-align/1rzhH.t06-thin90.a2m.gz # 1rzhH.t06-thin90.a2m with 52 sequences, total weight= 31.3398 avg weight= 0.602688 37 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rzhH/info/1rzhH.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rzhH/nostruct-align/1rzhH.t06-thin90.a2m.gz, have 85580 columns in 364 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1es9A/nostruct-align/1es9A.t06-thin90.a2m.gz # 1es9A.t06-thin90.a2m with 1612 sequences, total weight= 1612 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.807466 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1es9A/info/1es9A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1es9A/nostruct-align/1es9A.t06-thin90.a2m.gz, have 85792 columns in 365 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1ja1A/nostruct-align/1ja1A.t06-thin90.a2m.gz # 1ja1A.t06-thin90.a2m with 2283 sequences, total weight= 2283 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02508 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1ja1A/info/1ja1A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1ja1A/nostruct-align/1ja1A.t06-thin90.a2m.gz, have 86408 columns in 366 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n9pA/nostruct-align/1n9pA.t06-thin90.a2m.gz # 1n9pA.t06-thin90.a2m with 142 sequences, total weight= 31.7394 avg weight= 0.223517 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n9pA/info/1n9pA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n9pA/nostruct-align/1n9pA.t06-thin90.a2m.gz, have 86605 columns in 367 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tp6A/nostruct-align/1tp6A.t06-thin90.a2m.gz # 1tp6A.t06-thin90.a2m with 23 sequences, total weight= 10.6796 avg weight= 0.46433 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tp6A/info/1tp6A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tp6A/nostruct-align/1tp6A.t06-thin90.a2m.gz, have 86731 columns in 368 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wnaA/nostruct-align/1wnaA.t06-thin90.a2m.gz # 1wnaA.t06-thin90.a2m with 4 sequences, total weight= 3.17374 avg weight= 0.793434 11 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wnaA/info/1wnaA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wnaA/nostruct-align/1wnaA.t06-thin90.a2m.gz, have 86858 columns in 369 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dszA/nostruct-align/1dszA.t06-thin90.a2m.gz # 1dszA.t06-thin90.a2m with 836 sequences, total weight= 31.3187 avg weight= 0.0374626 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30048 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dszA/info/1dszA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dszA/nostruct-align/1dszA.t06-thin90.a2m.gz, have 86933 columns in 370 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yge/nostruct-align/1yge.t06-thin90.a2m.gz # 1yge.t06-thin90.a2m with 252 sequences, total weight= 64.2765 avg weight= 0.255065 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yge/info/1yge.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1yge/nostruct-align/1yge.t06-thin90.a2m.gz, have 87772 columns in 371 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gmxA/nostruct-align/1gmxA.t06-thin90.a2m.gz # 1gmxA.t06-thin90.a2m with 2952 sequences, total weight= 2952 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0996 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gmxA/info/1gmxA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gmxA/nostruct-align/1gmxA.t06-thin90.a2m.gz, have 87880 columns in 372 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fxlA/nostruct-align/1fxlA.t06-thin90.a2m.gz # 1fxlA.t06-thin90.a2m with 5214 sequences, total weight= 5214 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04209 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fxlA/info/1fxlA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fxlA/nostruct-align/1fxlA.t06-thin90.a2m.gz, have 88047 columns in 373 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u4bA/nostruct-align/1u4bA.t06-thin90.a2m.gz # 1u4bA.t06-thin90.a2m with 815 sequences, total weight= 815 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.261 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u4bA/info/1u4bA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1u4bA/nostruct-align/1u4bA.t06-thin90.a2m.gz, have 88627 columns in 374 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u7iA/nostruct-align/1u7iA.t06-thin90.a2m.gz # 1u7iA.t06-thin90.a2m with 1430 sequences, total weight= 1430 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.967074 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u7iA/info/1u7iA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1u7iA/nostruct-align/1u7iA.t06-thin90.a2m.gz, have 88761 columns in 375 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1khiA/nostruct-align/1khiA.t06-thin90.a2m.gz # 1khiA.t06-thin90.a2m with 123 sequences, total weight= 19.7708 avg weight= 0.160738 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1khiA/info/1khiA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1khiA/nostruct-align/1khiA.t06-thin90.a2m.gz, have 88908 columns in 376 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m2dA/nostruct-align/1m2dA.t06-thin90.a2m.gz # 1m2dA.t06-thin90.a2m with 227 sequences, total weight= 135.887 avg weight= 0.598622 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30189 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m2dA/info/1m2dA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m2dA/nostruct-align/1m2dA.t06-thin90.a2m.gz, have 89009 columns in 377 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oohA/nostruct-align/1oohA.t06-thin90.a2m.gz # 1oohA.t06-thin90.a2m with 318 sequences, total weight= 318 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.937613 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oohA/info/1oohA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oohA/nostruct-align/1oohA.t06-thin90.a2m.gz, have 89135 columns in 378 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d4oA/nostruct-align/1d4oA.t06-thin90.a2m.gz # 1d4oA.t06-thin90.a2m with 144 sequences, total weight= 6.41449 avg weight= 0.0445451 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d4oA/info/1d4oA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d4oA/nostruct-align/1d4oA.t06-thin90.a2m.gz, have 89312 columns in 379 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gk9A/nostruct-align/1gk9A.t06-thin90.a2m.gz # 1gk9A.t06-thin90.a2m with 183 sequences, total weight= 183 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21703 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gk9A/info/1gk9A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gk9A/nostruct-align/1gk9A.t06-thin90.a2m.gz, have 89520 columns in 380 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f46A/nostruct-align/1f46A.t06-thin90.a2m.gz # 1f46A.t06-thin90.a2m with 73 sequences, total weight= 23.3024 avg weight= 0.31921 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f46A/info/1f46A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f46A/nostruct-align/1f46A.t06-thin90.a2m.gz, have 89659 columns in 381 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dy5A/nostruct-align/1dy5A.t06-thin90.a2m.gz # 1dy5A.t06-thin90.a2m with 203 sequences, total weight= 39.4402 avg weight= 0.194287 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dy5A/info/1dy5A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dy5A/nostruct-align/1dy5A.t06-thin90.a2m.gz, have 89783 columns in 382 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mdc/nostruct-align/1mdc.t06-thin90.a2m.gz # 1mdc.t06-thin90.a2m with 304 sequences, total weight= 57.9005 avg weight= 0.190462 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mdc/info/1mdc.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mdc/nostruct-align/1mdc.t06-thin90.a2m.gz, have 89914 columns in 383 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q6zA/nostruct-align/1q6zA.t06-thin90.a2m.gz # 1q6zA.t06-thin90.a2m with 1872 sequences, total weight= 1872 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10466 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q6zA/info/1q6zA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q6zA/nostruct-align/1q6zA.t06-thin90.a2m.gz, have 90438 columns in 384 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jf3A/nostruct-align/1jf3A.t06-thin90.a2m.gz # 1jf3A.t06-thin90.a2m with 1019 sequences, total weight= 1019 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22937 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jf3A/info/1jf3A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jf3A/nostruct-align/1jf3A.t06-thin90.a2m.gz, have 90585 columns in 385 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vhvA/nostruct-align/1vhvA.t06-thin90.a2m.gz # 1vhvA.t06-thin90.a2m with 1692 sequences, total weight= 1692 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12056 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vhvA/info/1vhvA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vhvA/nostruct-align/1vhvA.t06-thin90.a2m.gz, have 90836 columns in 386 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n55A/nostruct-align/1n55A.t06-thin90.a2m.gz # 1n55A.t06-thin90.a2m with 643 sequences, total weight= 31.6257 avg weight= 0.0491847 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n55A/info/1n55A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n55A/nostruct-align/1n55A.t06-thin90.a2m.gz, have 91085 columns in 387 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mtyD/nostruct-align/1mtyD.t06-thin90.a2m.gz # 1mtyD.t06-thin90.a2m with 191 sequences, total weight= 126.493 avg weight= 0.662266 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mtyD/info/1mtyD.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mtyD/nostruct-align/1mtyD.t06-thin90.a2m.gz, have 91597 columns in 388 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o98A/nostruct-align/1o98A.t06-thin90.a2m.gz # 1o98A.t06-thin90.a2m with 1335 sequences, total weight= 1335 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15677 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o98A/info/1o98A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o98A/nostruct-align/1o98A.t06-thin90.a2m.gz, have 92106 columns in 389 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3p/3pviA/nostruct-align/3pviA.t06-thin90.a2m.gz # 3pviA.t06-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24387 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3p/3pviA/info/3pviA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/3p/3pviA/nostruct-align/3pviA.t06-thin90.a2m.gz, have 92262 columns in 390 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uehA/nostruct-align/1uehA.t06-thin90.a2m.gz # 1uehA.t06-thin90.a2m with 544 sequences, total weight= 48.9097 avg weight= 0.0899075 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3008 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uehA/info/1uehA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uehA/nostruct-align/1uehA.t06-thin90.a2m.gz, have 92476 columns in 391 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q9uA/nostruct-align/1q9uA.t06-thin90.a2m.gz # 1q9uA.t06-thin90.a2m with 166 sequences, total weight= 166 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17468 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q9uA/info/1q9uA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q9uA/nostruct-align/1q9uA.t06-thin90.a2m.gz, have 92604 columns in 392 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gwuA/nostruct-align/1gwuA.t06-thin90.a2m.gz # 1gwuA.t06-thin90.a2m with 1059 sequences, total weight= 100.686 avg weight= 0.0950763 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30454 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gwuA/info/1gwuA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gwuA/nostruct-align/1gwuA.t06-thin90.a2m.gz, have 92910 columns in 393 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n7hA/nostruct-align/1n7hA.t06-thin90.a2m.gz # 1n7hA.t06-thin90.a2m with 14453 sequences, total weight= 14453 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.934058 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n7hA/info/1n7hA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n7hA/nostruct-align/1n7hA.t06-thin90.a2m.gz, have 93241 columns in 394 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q8fA/nostruct-align/1q8fA.t06-thin90.a2m.gz # 1q8fA.t06-thin90.a2m with 352 sequences, total weight= 332.248 avg weight= 0.943886 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30086 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q8fA/info/1q8fA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q8fA/nostruct-align/1q8fA.t06-thin90.a2m.gz, have 93549 columns in 395 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r2zA/nostruct-align/1r2zA.t06-thin90.a2m.gz # 1r2zA.t06-thin90.a2m with 443 sequences, total weight= 73.0546 avg weight= 0.164909 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30239 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r2zA/info/1r2zA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r2zA/nostruct-align/1r2zA.t06-thin90.a2m.gz, have 93822 columns in 396 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nwwA/nostruct-align/1nwwA.t06-thin90.a2m.gz # 1nwwA.t06-thin90.a2m with 1253 sequences, total weight= 1253 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.795178 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nwwA/info/1nwwA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nwwA/nostruct-align/1nwwA.t06-thin90.a2m.gz, have 93967 columns in 397 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oq1A/nostruct-align/1oq1A.t06-thin90.a2m.gz # 1oq1A.t06-thin90.a2m with 3 sequences, total weight= 2.42809 avg weight= 0.809364 8 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oq1A/info/1oq1A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oq1A/nostruct-align/1oq1A.t06-thin90.a2m.gz, have 94190 columns in 398 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qstA/nostruct-align/1qstA.t06-thin90.a2m.gz # 1qstA.t06-thin90.a2m with 6044 sequences, total weight= 6044 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.820098 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qstA/info/1qstA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qstA/nostruct-align/1qstA.t06-thin90.a2m.gz, have 94350 columns in 399 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k5nB/nostruct-align/1k5nB.t06-thin90.a2m.gz # 1k5nB.t06-thin90.a2m with 1577 sequences, total weight= 1577 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28669 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k5nB/info/1k5nB.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k5nB/nostruct-align/1k5nB.t06-thin90.a2m.gz, have 94450 columns in 400 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eaqA/nostruct-align/1eaqA.t06-thin90.a2m.gz # 1eaqA.t06-thin90.a2m with 42 sequences, total weight= 5.85638 avg weight= 0.139438 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eaqA/info/1eaqA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1eaqA/nostruct-align/1eaqA.t06-thin90.a2m.gz, have 94574 columns in 401 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i6lA/nostruct-align/1i6lA.t06-thin90.a2m.gz # 1i6lA.t06-thin90.a2m with 1019 sequences, total weight= 1019 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26975 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i6lA/info/1i6lA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i6lA/nostruct-align/1i6lA.t06-thin90.a2m.gz, have 94900 columns in 402 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xakA/nostruct-align/1xakA.t06-thin90.a2m.gz # 1xakA.t06-thin90.a2m with 3 sequences, total weight= 2.41011 avg weight= 0.803371 7 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xakA/info/1xakA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xakA/nostruct-align/1xakA.t06-thin90.a2m.gz, have 94968 columns in 403 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3s/3seb/nostruct-align/3seb.t06-thin90.a2m.gz # 3seb.t06-thin90.a2m with 113 sequences, total weight= 66.692 avg weight= 0.590194 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3s/3seb/info/3seb.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/3s/3seb/nostruct-align/3seb.t06-thin90.a2m.gz, have 95206 columns in 404 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d2vC/nostruct-align/1d2vC.t06-thin90.a2m.gz # 1d2vC.t06-thin90.a2m with 329 sequences, total weight= 258.283 avg weight= 0.785056 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30207 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d2vC/info/1d2vC.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d2vC/nostruct-align/1d2vC.t06-thin90.a2m.gz, have 95672 columns in 405 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qv1A/nostruct-align/1qv1A.t06-thin90.a2m.gz # 1qv1A.t06-thin90.a2m with 969 sequences, total weight= 969 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10499 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qv1A/info/1qv1A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qv1A/nostruct-align/1qv1A.t06-thin90.a2m.gz, have 95859 columns in 406 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x74A/nostruct-align/1x74A.t06-thin90.a2m.gz # 1x74A.t06-thin90.a2m with 1052 sequences, total weight= 117.237 avg weight= 0.111442 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30974 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x74A/info/1x74A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1x74A/nostruct-align/1x74A.t06-thin90.a2m.gz, have 96213 columns in 407 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qreA/nostruct-align/1qreA.t06-thin90.a2m.gz # 1qreA.t06-thin90.a2m with 2840 sequences, total weight= 2840 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11823 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qreA/info/1qreA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qreA/nostruct-align/1qreA.t06-thin90.a2m.gz, have 96423 columns in 408 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ow4A/nostruct-align/1ow4A.t06-thin90.a2m.gz # 1ow4A.t06-thin90.a2m with 16 sequences, total weight= 16 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19465 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ow4A/info/1ow4A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ow4A/nostruct-align/1ow4A.t06-thin90.a2m.gz, have 96543 columns in 409 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mw9X/nostruct-align/1mw9X.t06-thin90.a2m.gz # 1mw9X.t06-thin90.a2m with 710 sequences, total weight= 79.2087 avg weight= 0.111562 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30473 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mw9X/info/1mw9X.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mw9X/nostruct-align/1mw9X.t06-thin90.a2m.gz, have 97099 columns in 410 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n57A/nostruct-align/1n57A.t06-thin90.a2m.gz # 1n57A.t06-thin90.a2m with 1326 sequences, total weight= 1326 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10255 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n57A/info/1n57A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n57A/nostruct-align/1n57A.t06-thin90.a2m.gz, have 97378 columns in 411 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t4bA/nostruct-align/1t4bA.t06-thin90.a2m.gz # 1t4bA.t06-thin90.a2m with 2411 sequences, total weight= 1821.73 avg weight= 0.755591 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30751 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t4bA/info/1t4bA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t4bA/nostruct-align/1t4bA.t06-thin90.a2m.gz, have 97745 columns in 412 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mj5A/nostruct-align/1mj5A.t06-thin90.a2m.gz # 1mj5A.t06-thin90.a2m with 9660 sequences, total weight= 9660 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.65218 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mj5A/info/1mj5A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mj5A/nostruct-align/1mj5A.t06-thin90.a2m.gz, have 98042 columns in 413 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o08A/nostruct-align/1o08A.t06-thin90.a2m.gz # 1o08A.t06-thin90.a2m with 4345 sequences, total weight= 4345 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.840381 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o08A/info/1o08A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o08A/nostruct-align/1o08A.t06-thin90.a2m.gz, have 98263 columns in 414 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hxiA/nostruct-align/1hxiA.t06-thin90.a2m.gz # 1hxiA.t06-thin90.a2m with 6926 sequences, total weight= 6926 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.930047 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hxiA/info/1hxiA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hxiA/nostruct-align/1hxiA.t06-thin90.a2m.gz, have 98375 columns in 415 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1od6A/nostruct-align/1od6A.t06-thin90.a2m.gz # 1od6A.t06-thin90.a2m with 1673 sequences, total weight= 1673 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03274 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1od6A/info/1od6A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1od6A/nostruct-align/1od6A.t06-thin90.a2m.gz, have 98530 columns in 416 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jbeA/nostruct-align/1jbeA.t06-thin90.a2m.gz # 1jbeA.t06-thin90.a2m with 13714 sequences, total weight= 13714 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21179 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jbeA/info/1jbeA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jbeA/nostruct-align/1jbeA.t06-thin90.a2m.gz, have 98656 columns in 417 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uzvA/nostruct-align/1uzvA.t06-thin90.a2m.gz # 1uzvA.t06-thin90.a2m with 17 sequences, total weight= 7.821 avg weight= 0.460059 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uzvA/info/1uzvA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uzvA/nostruct-align/1uzvA.t06-thin90.a2m.gz, have 98770 columns in 418 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wehA/nostruct-align/1wehA.t06-thin90.a2m.gz # 1wehA.t06-thin90.a2m with 513 sequences, total weight= 96.5591 avg weight= 0.188224 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30553 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wehA/info/1wehA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wehA/nostruct-align/1wehA.t06-thin90.a2m.gz, have 98941 columns in 419 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wojA/nostruct-align/1wojA.t06-thin90.a2m.gz # 1wojA.t06-thin90.a2m with 11 sequences, total weight= 3.86585 avg weight= 0.351441 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wojA/info/1wojA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wojA/nostruct-align/1wojA.t06-thin90.a2m.gz, have 99150 columns in 420 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lyqA/nostruct-align/1lyqA.t06-thin90.a2m.gz # 1lyqA.t06-thin90.a2m with 127 sequences, total weight= 48.7204 avg weight= 0.383625 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30042 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lyqA/info/1lyqA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lyqA/nostruct-align/1lyqA.t06-thin90.a2m.gz, have 99251 columns in 421 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dmgA/nostruct-align/1dmgA.t06-thin90.a2m.gz # 1dmgA.t06-thin90.a2m with 443 sequences, total weight= 125.382 avg weight= 0.283029 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30217 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dmgA/info/1dmgA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dmgA/nostruct-align/1dmgA.t06-thin90.a2m.gz, have 99423 columns in 422 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bemA/nostruct-align/2bemA.t06-thin90.a2m.gz # 2bemA.t06-thin90.a2m with 141 sequences, total weight= 60.9019 avg weight= 0.431929 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3003 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bemA/info/2bemA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/2b/2bemA/nostruct-align/2bemA.t06-thin90.a2m.gz, have 99593 columns in 423 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1msk/nostruct-align/1msk.t06-thin90.a2m.gz # 1msk.t06-thin90.a2m with 221 sequences, total weight= 39.6252 avg weight= 0.1793 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1msk/info/1msk.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1msk/nostruct-align/1msk.t06-thin90.a2m.gz, have 99920 columns in 424 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zceA/nostruct-align/1zceA.t06-thin90.a2m.gz # 1zceA.t06-thin90.a2m with 185 sequences, total weight= 25.8593 avg weight= 0.13978 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zceA/info/1zceA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1z/1zceA/nostruct-align/1zceA.t06-thin90.a2m.gz, have 100066 columns in 425 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xd3A/nostruct-align/1xd3A.t06-thin90.a2m.gz # 1xd3A.t06-thin90.a2m with 153 sequences, total weight= 39.7124 avg weight= 0.259558 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xd3A/info/1xd3A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xd3A/nostruct-align/1xd3A.t06-thin90.a2m.gz, have 100295 columns in 426 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y7bA/nostruct-align/1y7bA.t06-thin90.a2m.gz # 1y7bA.t06-thin90.a2m with 962 sequences, total weight= 962 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00166 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y7bA/info/1y7bA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1y7bA/nostruct-align/1y7bA.t06-thin90.a2m.gz, have 100829 columns in 427 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dkiA/nostruct-align/1dkiA.t06-thin90.a2m.gz # 1dkiA.t06-thin90.a2m with 13 sequences, total weight= 13 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13138 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dkiA/info/1dkiA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dkiA/nostruct-align/1dkiA.t06-thin90.a2m.gz, have 101132 columns in 428 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ofzA/nostruct-align/1ofzA.t06-thin90.a2m.gz # 1ofzA.t06-thin90.a2m with 60 sequences, total weight= 60 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.962184 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ofzA/info/1ofzA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ofzA/nostruct-align/1ofzA.t06-thin90.a2m.gz, have 101444 columns in 429 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hqsA/nostruct-align/1hqsA.t06-thin90.a2m.gz # 1hqsA.t06-thin90.a2m with 974 sequences, total weight= 88.5477 avg weight= 0.0909114 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30239 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hqsA/info/1hqsA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hqsA/nostruct-align/1hqsA.t06-thin90.a2m.gz, have 101867 columns in 430 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1ds1A/nostruct-align/1ds1A.t06-thin90.a2m.gz # 1ds1A.t06-thin90.a2m with 579 sequences, total weight= 579 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.976289 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1ds1A/info/1ds1A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1ds1A/nostruct-align/1ds1A.t06-thin90.a2m.gz, have 102190 columns in 431 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g8qA/nostruct-align/1g8qA.t06-thin90.a2m.gz # 1g8qA.t06-thin90.a2m with 36 sequences, total weight= 13.9327 avg weight= 0.387018 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g8qA/info/1g8qA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g8qA/nostruct-align/1g8qA.t06-thin90.a2m.gz, have 102280 columns in 432 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c7kA/nostruct-align/1c7kA.t06-thin90.a2m.gz # 1c7kA.t06-thin90.a2m with 159 sequences, total weight= 18.5416 avg weight= 0.116614 41 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c7kA/info/1c7kA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1c7kA/nostruct-align/1c7kA.t06-thin90.a2m.gz, have 102412 columns in 433 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mwpA/nostruct-align/1mwpA.t06-thin90.a2m.gz # 1mwpA.t06-thin90.a2m with 31 sequences, total weight= 7.32942 avg weight= 0.236433 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mwpA/info/1mwpA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mwpA/nostruct-align/1mwpA.t06-thin90.a2m.gz, have 102508 columns in 434 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kicA/nostruct-align/1kicA.t06-thin90.a2m.gz # 1kicA.t06-thin90.a2m with 353 sequences, total weight= 319.731 avg weight= 0.905754 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30092 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kicA/info/1kicA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kicA/nostruct-align/1kicA.t06-thin90.a2m.gz, have 102825 columns in 435 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1ntyA/nostruct-align/1ntyA.t06-thin90.a2m.gz # 1ntyA.t06-thin90.a2m with 1031 sequences, total weight= 1031 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01409 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1ntyA/info/1ntyA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1ntyA/nostruct-align/1ntyA.t06-thin90.a2m.gz, have 103130 columns in 436 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1ny1A/nostruct-align/1ny1A.t06-thin90.a2m.gz # 1ny1A.t06-thin90.a2m with 1201 sequences, total weight= 1201 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.994779 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1ny1A/info/1ny1A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1ny1A/nostruct-align/1ny1A.t06-thin90.a2m.gz, have 103365 columns in 437 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o1yA/nostruct-align/1o1yA.t06-thin90.a2m.gz # 1o1yA.t06-thin90.a2m with 3528 sequences, total weight= 3528 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01731 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o1yA/info/1o1yA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o1yA/nostruct-align/1o1yA.t06-thin90.a2m.gz, have 103595 columns in 438 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t92A/nostruct-align/1t92A.t06-thin90.a2m.gz # 1t92A.t06-thin90.a2m with 144 sequences, total weight= 18.4896 avg weight= 0.1284 42 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t92A/info/1t92A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t92A/nostruct-align/1t92A.t06-thin90.a2m.gz, have 103703 columns in 439 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1izcA/nostruct-align/1izcA.t06-thin90.a2m.gz # 1izcA.t06-thin90.a2m with 1735 sequences, total weight= 1735 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10966 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1izcA/info/1izcA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1izcA/nostruct-align/1izcA.t06-thin90.a2m.gz, have 104002 columns in 440 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k8uA/nostruct-align/1k8uA.t06-thin90.a2m.gz # 1k8uA.t06-thin90.a2m with 181 sequences, total weight= 39.1194 avg weight= 0.21613 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k8uA/info/1k8uA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k8uA/nostruct-align/1k8uA.t06-thin90.a2m.gz, have 104091 columns in 441 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ig0A/nostruct-align/1ig0A.t06-thin90.a2m.gz # 1ig0A.t06-thin90.a2m with 175 sequences, total weight= 175 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16478 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ig0A/info/1ig0A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ig0A/nostruct-align/1ig0A.t06-thin90.a2m.gz, have 104408 columns in 442 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fi2A/nostruct-align/1fi2A.t06-thin90.a2m.gz # 1fi2A.t06-thin90.a2m with 1238 sequences, total weight= 1238 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.933911 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fi2A/info/1fi2A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fi2A/nostruct-align/1fi2A.t06-thin90.a2m.gz, have 104609 columns in 443 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1ddwA/nostruct-align/1ddwA.t06-thin90.a2m.gz # 1ddwA.t06-thin90.a2m with 67 sequences, total weight= 14.3616 avg weight= 0.214352 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1ddwA/info/1ddwA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1ddwA/nostruct-align/1ddwA.t06-thin90.a2m.gz, have 104720 columns in 444 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p1xA/nostruct-align/1p1xA.t06-thin90.a2m.gz # 1p1xA.t06-thin90.a2m with 277 sequences, total weight= 49.8326 avg weight= 0.179901 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30052 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p1xA/info/1p1xA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p1xA/nostruct-align/1p1xA.t06-thin90.a2m.gz, have 104970 columns in 445 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ydyA/nostruct-align/1ydyA.t06-thin90.a2m.gz # 1ydyA.t06-thin90.a2m with 842 sequences, total weight= 842 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01342 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ydyA/info/1ydyA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1ydyA/nostruct-align/1ydyA.t06-thin90.a2m.gz, have 105298 columns in 446 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kw4A/nostruct-align/1kw4A.t06-thin90.a2m.gz # 1kw4A.t06-thin90.a2m with 96 sequences, total weight= 13.2467 avg weight= 0.137987 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kw4A/info/1kw4A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kw4A/nostruct-align/1kw4A.t06-thin90.a2m.gz, have 105368 columns in 447 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m4jA/nostruct-align/1m4jA.t06-thin90.a2m.gz # 1m4jA.t06-thin90.a2m with 278 sequences, total weight= 278 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27003 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m4jA/info/1m4jA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m4jA/nostruct-align/1m4jA.t06-thin90.a2m.gz, have 105501 columns in 448 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t6cA/nostruct-align/1t6cA.t06-thin90.a2m.gz # 1t6cA.t06-thin90.a2m with 2334 sequences, total weight= 2334 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10038 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t6cA/info/1t6cA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t6cA/nostruct-align/1t6cA.t06-thin90.a2m.gz, have 105807 columns in 449 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w27A/nostruct-align/1w27A.t06-thin90.a2m.gz # 1w27A.t06-thin90.a2m with 359 sequences, total weight= 52.852 avg weight= 0.14722 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w27A/info/1w27A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w27A/nostruct-align/1w27A.t06-thin90.a2m.gz, have 106497 columns in 450 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o7nA/nostruct-align/1o7nA.t06-thin90.a2m.gz # 1o7nA.t06-thin90.a2m with 1134 sequences, total weight= 1134 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.951161 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o7nA/info/1o7nA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o7nA/nostruct-align/1o7nA.t06-thin90.a2m.gz, have 106944 columns in 451 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1ak0/nostruct-align/1ak0.t06-thin90.a2m.gz # 1ak0.t06-thin90.a2m with 123 sequences, total weight= 123 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.185 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1ak0/info/1ak0.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1ak0/nostruct-align/1ak0.t06-thin90.a2m.gz, have 107208 columns in 452 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/25/256bA/nostruct-align/256bA.t06-thin90.a2m.gz # 256bA.t06-thin90.a2m with 22 sequences, total weight= 11.9231 avg weight= 0.541961 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/25/256bA/info/256bA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/25/256bA/nostruct-align/256bA.t06-thin90.a2m.gz, have 107314 columns in 453 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q2hA/nostruct-align/1q2hA.t06-thin90.a2m.gz # 1q2hA.t06-thin90.a2m with 16 sequences, total weight= 7.37307 avg weight= 0.460817 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q2hA/info/1q2hA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q2hA/nostruct-align/1q2hA.t06-thin90.a2m.gz, have 107377 columns in 454 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h5qA/nostruct-align/1h5qA.t06-thin90.a2m.gz # 1h5qA.t06-thin90.a2m with 12163 sequences, total weight= 12163 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16349 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h5qA/info/1h5qA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h5qA/nostruct-align/1h5qA.t06-thin90.a2m.gz, have 107637 columns in 455 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rgxA/nostruct-align/1rgxA.t06-thin90.a2m.gz # 1rgxA.t06-thin90.a2m with 16 sequences, total weight= 3.50284 avg weight= 0.218928 19 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rgxA/info/1rgxA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rgxA/nostruct-align/1rgxA.t06-thin90.a2m.gz, have 107726 columns in 456 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tyv/nostruct-align/1tyv.t06-thin90.a2m.gz # 1tyv.t06-thin90.a2m with 7 sequences, total weight= 3.53059 avg weight= 0.504369 10 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tyv/info/1tyv.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tyv/nostruct-align/1tyv.t06-thin90.a2m.gz, have 108268 columns in 457 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tqhA/nostruct-align/1tqhA.t06-thin90.a2m.gz # 1tqhA.t06-thin90.a2m with 12539 sequences, total weight= 12539 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.704788 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tqhA/info/1tqhA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tqhA/nostruct-align/1tqhA.t06-thin90.a2m.gz, have 108510 columns in 458 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fdr/nostruct-align/1fdr.t06-thin90.a2m.gz # 1fdr.t06-thin90.a2m with 2576 sequences, total weight= 2576 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0161 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fdr/info/1fdr.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fdr/nostruct-align/1fdr.t06-thin90.a2m.gz, have 108754 columns in 459 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1chd/nostruct-align/1chd.t06-thin90.a2m.gz # 1chd.t06-thin90.a2m with 427 sequences, total weight= 39.4276 avg weight= 0.0923362 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30092 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1chd/info/1chd.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1chd/nostruct-align/1chd.t06-thin90.a2m.gz, have 108952 columns in 460 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a3c/nostruct-align/1a3c.t06-thin90.a2m.gz # 1a3c.t06-thin90.a2m with 1554 sequences, total weight= 1554 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07461 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a3c/info/1a3c.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1a3c/nostruct-align/1a3c.t06-thin90.a2m.gz, have 109118 columns in 461 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fyeA/nostruct-align/1fyeA.t06-thin90.a2m.gz # 1fyeA.t06-thin90.a2m with 994 sequences, total weight= 994 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01911 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fyeA/info/1fyeA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fyeA/nostruct-align/1fyeA.t06-thin90.a2m.gz, have 109338 columns in 462 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ia8A/nostruct-align/1ia8A.t06-thin90.a2m.gz # 1ia8A.t06-thin90.a2m with 13121 sequences, total weight= 13121 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15262 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ia8A/info/1ia8A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ia8A/nostruct-align/1ia8A.t06-thin90.a2m.gz, have 109610 columns in 463 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k5nA/nostruct-align/1k5nA.t06-thin90.a2m.gz # 1k5nA.t06-thin90.a2m with 2373 sequences, total weight= 2373 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27994 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k5nA/info/1k5nA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k5nA/nostruct-align/1k5nA.t06-thin90.a2m.gz, have 109886 columns in 464 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hfuA/nostruct-align/1hfuA.t06-thin90.a2m.gz # 1hfuA.t06-thin90.a2m with 1041 sequences, total weight= 1041 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10984 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hfuA/info/1hfuA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hfuA/nostruct-align/1hfuA.t06-thin90.a2m.gz, have 110386 columns in 465 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ym3A/nostruct-align/1ym3A.t06-thin90.a2m.gz # 1ym3A.t06-thin90.a2m with 501 sequences, total weight= 259.895 avg weight= 0.518752 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30766 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ym3A/info/1ym3A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1ym3A/nostruct-align/1ym3A.t06-thin90.a2m.gz, have 110579 columns in 466 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e30A/nostruct-align/1e30A.t06-thin90.a2m.gz # 1e30A.t06-thin90.a2m with 708 sequences, total weight= 708 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.988331 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e30A/info/1e30A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e30A/nostruct-align/1e30A.t06-thin90.a2m.gz, have 110732 columns in 467 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rttA/nostruct-align/1rttA.t06-thin90.a2m.gz # 1rttA.t06-thin90.a2m with 1755 sequences, total weight= 1755 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.952138 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rttA/info/1rttA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rttA/nostruct-align/1rttA.t06-thin90.a2m.gz, have 110906 columns in 468 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fl0A/nostruct-align/1fl0A.t06-thin90.a2m.gz # 1fl0A.t06-thin90.a2m with 724 sequences, total weight= 112.382 avg weight= 0.155224 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30609 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fl0A/info/1fl0A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fl0A/nostruct-align/1fl0A.t06-thin90.a2m.gz, have 111070 columns in 469 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tovA/nostruct-align/1tovA.t06-thin90.a2m.gz # 1tovA.t06-thin90.a2m with 275 sequences, total weight= 78.5942 avg weight= 0.285797 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30316 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tovA/info/1tovA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tovA/nostruct-align/1tovA.t06-thin90.a2m.gz, have 111167 columns in 470 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dqeA/nostruct-align/1dqeA.t06-thin90.a2m.gz # 1dqeA.t06-thin90.a2m with 150 sequences, total weight= 150 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11251 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dqeA/info/1dqeA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dqeA/nostruct-align/1dqeA.t06-thin90.a2m.gz, have 111304 columns in 471 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i0lA/nostruct-align/1i0lA.t06-thin90.a2m.gz # 1i0lA.t06-thin90.a2m with 1848 sequences, total weight= 1848 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04248 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i0lA/info/1i0lA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i0lA/nostruct-align/1i0lA.t06-thin90.a2m.gz, have 111496 columns in 472 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fcyA/nostruct-align/1fcyA.t06-thin90.a2m.gz # 1fcyA.t06-thin90.a2m with 1165 sequences, total weight= 1165 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.968329 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fcyA/info/1fcyA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fcyA/nostruct-align/1fcyA.t06-thin90.a2m.gz, have 111732 columns in 473 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nox/nostruct-align/1nox.t06-thin90.a2m.gz # 1nox.t06-thin90.a2m with 1319 sequences, total weight= 1319 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00073 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nox/info/1nox.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nox/nostruct-align/1nox.t06-thin90.a2m.gz, have 111932 columns in 474 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ug4A/nostruct-align/1ug4A.t06-thin90.a2m.gz # 1ug4A.t06-thin90.a2m with 167 sequences, total weight= 19.264 avg weight= 0.115353 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ug4A/info/1ug4A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ug4A/nostruct-align/1ug4A.t06-thin90.a2m.gz, have 111992 columns in 475 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1onwA/nostruct-align/1onwA.t06-thin90.a2m.gz # 1onwA.t06-thin90.a2m with 3210 sequences, total weight= 3210 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.875081 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1onwA/info/1onwA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1onwA/nostruct-align/1onwA.t06-thin90.a2m.gz, have 112368 columns in 476 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t0pB/nostruct-align/1t0pB.t06-thin90.a2m.gz # 1t0pB.t06-thin90.a2m with 35 sequences, total weight= 11.6654 avg weight= 0.333297 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t0pB/info/1t0pB.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t0pB/nostruct-align/1t0pB.t06-thin90.a2m.gz, have 112454 columns in 477 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ijqA/nostruct-align/1ijqA.t06-thin90.a2m.gz # 1ijqA.t06-thin90.a2m with 1971 sequences, total weight= 1971 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.937471 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ijqA/info/1ijqA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ijqA/nostruct-align/1ijqA.t06-thin90.a2m.gz, have 112762 columns in 478 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e1hA/nostruct-align/1e1hA.t06-thin90.a2m.gz # 1e1hA.t06-thin90.a2m with 29 sequences, total weight= 9.13298 avg weight= 0.31493 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e1hA/info/1e1hA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e1hA/nostruct-align/1e1hA.t06-thin90.a2m.gz, have 112997 columns in 479 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nepA/nostruct-align/1nepA.t06-thin90.a2m.gz # 1nepA.t06-thin90.a2m with 124 sequences, total weight= 124 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22291 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nepA/info/1nepA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nepA/nostruct-align/1nepA.t06-thin90.a2m.gz, have 113127 columns in 480 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w41A/nostruct-align/1w41A.t06-thin90.a2m.gz # 1w41A.t06-thin90.a2m with 398 sequences, total weight= 148.082 avg weight= 0.372066 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30614 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w41A/info/1w41A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w41A/nostruct-align/1w41A.t06-thin90.a2m.gz, have 113226 columns in 481 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s2wA/nostruct-align/1s2wA.t06-thin90.a2m.gz # 1s2wA.t06-thin90.a2m with 647 sequences, total weight= 214.122 avg weight= 0.330946 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31171 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s2wA/info/1s2wA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s2wA/nostruct-align/1s2wA.t06-thin90.a2m.gz, have 113484 columns in 482 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u60A/nostruct-align/1u60A.t06-thin90.a2m.gz # 1u60A.t06-thin90.a2m with 188 sequences, total weight= 48.3361 avg weight= 0.257107 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u60A/info/1u60A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1u60A/nostruct-align/1u60A.t06-thin90.a2m.gz, have 113793 columns in 483 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jg1A/nostruct-align/1jg1A.t06-thin90.a2m.gz # 1jg1A.t06-thin90.a2m with 14898 sequences, total weight= 14898 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.69114 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jg1A/info/1jg1A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jg1A/nostruct-align/1jg1A.t06-thin90.a2m.gz, have 114008 columns in 484 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f3uB/nostruct-align/1f3uB.t06-thin90.a2m.gz # 1f3uB.t06-thin90.a2m with 31 sequences, total weight= 17.8102 avg weight= 0.574522 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f3uB/info/1f3uB.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f3uB/nostruct-align/1f3uB.t06-thin90.a2m.gz, have 114147 columns in 485 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mxiA/nostruct-align/1mxiA.t06-thin90.a2m.gz # 1mxiA.t06-thin90.a2m with 1357 sequences, total weight= 1357 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27608 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mxiA/info/1mxiA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mxiA/nostruct-align/1mxiA.t06-thin90.a2m.gz, have 114303 columns in 486 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tbfA/nostruct-align/1tbfA.t06-thin90.a2m.gz # 1tbfA.t06-thin90.a2m with 302 sequences, total weight= 161.728 avg weight= 0.535522 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30338 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tbfA/info/1tbfA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tbfA/nostruct-align/1tbfA.t06-thin90.a2m.gz, have 114629 columns in 487 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rh6A/nostruct-align/1rh6A.t06-thin90.a2m.gz # 1rh6A.t06-thin90.a2m with 5 sequences, total weight= 4.53672 avg weight= 0.907343 13 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rh6A/info/1rh6A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rh6A/nostruct-align/1rh6A.t06-thin90.a2m.gz, have 114684 columns in 488 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jfxA/nostruct-align/1jfxA.t06-thin90.a2m.gz # 1jfxA.t06-thin90.a2m with 247 sequences, total weight= 247 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15346 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jfxA/info/1jfxA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jfxA/nostruct-align/1jfxA.t06-thin90.a2m.gz, have 114901 columns in 489 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j79A/nostruct-align/1j79A.t06-thin90.a2m.gz # 1j79A.t06-thin90.a2m with 1011 sequences, total weight= 1011 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13252 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j79A/info/1j79A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j79A/nostruct-align/1j79A.t06-thin90.a2m.gz, have 115244 columns in 490 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o9wA/nostruct-align/1o9wA.t06-thin90.a2m.gz # 1o9wA.t06-thin90.a2m with 2 sequences, total weight= 1.86727 avg weight= 0.933637 7 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o9wA/info/1o9wA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o9wA/nostruct-align/1o9wA.t06-thin90.a2m.gz, have 115413 columns in 491 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m70A/nostruct-align/1m70A.t06-thin90.a2m.gz # 1m70A.t06-thin90.a2m with 1690 sequences, total weight= 1690 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01534 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m70A/info/1m70A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m70A/nostruct-align/1m70A.t06-thin90.a2m.gz, have 115603 columns in 492 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pxzA/nostruct-align/1pxzA.t06-thin90.a2m.gz # 1pxzA.t06-thin90.a2m with 391 sequences, total weight= 391 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07464 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pxzA/info/1pxzA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pxzA/nostruct-align/1pxzA.t06-thin90.a2m.gz, have 115949 columns in 493 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vmbA/nostruct-align/1vmbA.t06-thin90.a2m.gz # 1vmbA.t06-thin90.a2m with 318 sequences, total weight= 121.715 avg weight= 0.382752 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30327 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vmbA/info/1vmbA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vmbA/nostruct-align/1vmbA.t06-thin90.a2m.gz, have 116056 columns in 494 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bjuA/nostruct-align/2bjuA.t06-thin90.a2m.gz # 2bjuA.t06-thin90.a2m with 1152 sequences, total weight= 1152 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18588 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bjuA/info/2bjuA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/2b/2bjuA/nostruct-align/2bjuA.t06-thin90.a2m.gz, have 116385 columns in 495 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lq9A/nostruct-align/1lq9A.t06-thin90.a2m.gz # 1lq9A.t06-thin90.a2m with 208 sequences, total weight= 208 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04494 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lq9A/info/1lq9A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lq9A/nostruct-align/1lq9A.t06-thin90.a2m.gz, have 116497 columns in 496 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p90A/nostruct-align/1p90A.t06-thin90.a2m.gz # 1p90A.t06-thin90.a2m with 313 sequences, total weight= 313 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14352 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p90A/info/1p90A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p90A/nostruct-align/1p90A.t06-thin90.a2m.gz, have 116620 columns in 497 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zin/nostruct-align/1zin.t06-thin90.a2m.gz # 1zin.t06-thin90.a2m with 2309 sequences, total weight= 2309 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.948849 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zin/info/1zin.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1z/1zin/nostruct-align/1zin.t06-thin90.a2m.gz, have 116837 columns in 498 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l5oA/nostruct-align/1l5oA.t06-thin90.a2m.gz # 1l5oA.t06-thin90.a2m with 240 sequences, total weight= 46.9673 avg weight= 0.195697 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l5oA/info/1l5oA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1l5oA/nostruct-align/1l5oA.t06-thin90.a2m.gz, have 117183 columns in 499 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qddA/nostruct-align/1qddA.t06-thin90.a2m.gz # 1qddA.t06-thin90.a2m with 2353 sequences, total weight= 2353 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.972217 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qddA/info/1qddA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qddA/nostruct-align/1qddA.t06-thin90.a2m.gz, have 117327 columns in 500 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jhfA/nostruct-align/1jhfA.t06-thin90.a2m.gz # 1jhfA.t06-thin90.a2m with 792 sequences, total weight= 792 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1501 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jhfA/info/1jhfA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jhfA/nostruct-align/1jhfA.t06-thin90.a2m.gz, have 117524 columns in 501 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d4aA/nostruct-align/1d4aA.t06-thin90.a2m.gz # 1d4aA.t06-thin90.a2m with 1608 sequences, total weight= 1608 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11816 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d4aA/info/1d4aA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d4aA/nostruct-align/1d4aA.t06-thin90.a2m.gz, have 117797 columns in 502 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rgzA/nostruct-align/1rgzA.t06-thin90.a2m.gz # 1rgzA.t06-thin90.a2m with 1352 sequences, total weight= 1352 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.995627 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rgzA/info/1rgzA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rgzA/nostruct-align/1rgzA.t06-thin90.a2m.gz, have 118160 columns in 503 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s3eA/nostruct-align/1s3eA.t06-thin90.a2m.gz # 1s3eA.t06-thin90.a2m with 10616 sequences, total weight= 10616 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.684875 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s3eA/info/1s3eA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s3eA/nostruct-align/1s3eA.t06-thin90.a2m.gz, have 118659 columns in 504 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tn6B/nostruct-align/1tn6B.t06-thin90.a2m.gz # 1tn6B.t06-thin90.a2m with 844 sequences, total weight= 844 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01779 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tn6B/info/1tn6B.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tn6B/nostruct-align/1tn6B.t06-thin90.a2m.gz, have 119069 columns in 505 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h80A/nostruct-align/1h80A.t06-thin90.a2m.gz # 1h80A.t06-thin90.a2m with 1081 sequences, total weight= 1081 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18768 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h80A/info/1h80A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h80A/nostruct-align/1h80A.t06-thin90.a2m.gz, have 119502 columns in 506 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sqsA/nostruct-align/1sqsA.t06-thin90.a2m.gz # 1sqsA.t06-thin90.a2m with 1790 sequences, total weight= 1790 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.912453 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sqsA/info/1sqsA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sqsA/nostruct-align/1sqsA.t06-thin90.a2m.gz, have 119734 columns in 507 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ix9A/nostruct-align/1ix9A.t06-thin90.a2m.gz # 1ix9A.t06-thin90.a2m with 807 sequences, total weight= 37.5746 avg weight= 0.0465608 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ix9A/info/1ix9A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ix9A/nostruct-align/1ix9A.t06-thin90.a2m.gz, have 119939 columns in 508 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n97A/nostruct-align/1n97A.t06-thin90.a2m.gz # 1n97A.t06-thin90.a2m with 5674 sequences, total weight= 5674 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01002 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n97A/info/1n97A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n97A/nostruct-align/1n97A.t06-thin90.a2m.gz, have 120324 columns in 509 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ornA/nostruct-align/1ornA.t06-thin90.a2m.gz # 1ornA.t06-thin90.a2m with 1194 sequences, total weight= 1194 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17701 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ornA/info/1ornA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ornA/nostruct-align/1ornA.t06-thin90.a2m.gz, have 120538 columns in 510 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pkhA/nostruct-align/1pkhA.t06-thin90.a2m.gz # 1pkhA.t06-thin90.a2m with 704 sequences, total weight= 704 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24666 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pkhA/info/1pkhA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pkhA/nostruct-align/1pkhA.t06-thin90.a2m.gz, have 120720 columns in 511 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o5kA/nostruct-align/1o5kA.t06-thin90.a2m.gz # 1o5kA.t06-thin90.a2m with 910 sequences, total weight= 910 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29833 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o5kA/info/1o5kA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o5kA/nostruct-align/1o5kA.t06-thin90.a2m.gz, have 121015 columns in 512 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xg0A/nostruct-align/1xg0A.t06-thin90.a2m.gz # 1xg0A.t06-thin90.a2m with 9 sequences, total weight= 5.76171 avg weight= 0.640189 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xg0A/info/1xg0A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xg0A/nostruct-align/1xg0A.t06-thin90.a2m.gz, have 121091 columns in 513 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kqrA/nostruct-align/1kqrA.t06-thin90.a2m.gz # 1kqrA.t06-thin90.a2m with 66 sequences, total weight= 7.76006 avg weight= 0.117577 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kqrA/info/1kqrA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kqrA/nostruct-align/1kqrA.t06-thin90.a2m.gz, have 121251 columns in 514 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bjvA/nostruct-align/2bjvA.t06-thin90.a2m.gz # 2bjvA.t06-thin90.a2m with 6560 sequences, total weight= 6560 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14707 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bjvA/info/2bjvA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/2b/2bjvA/nostruct-align/2bjvA.t06-thin90.a2m.gz, have 121487 columns in 515 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xeoA/nostruct-align/1xeoA.t06-thin90.a2m.gz # 1xeoA.t06-thin90.a2m with 557 sequences, total weight= 53.456 avg weight= 0.0959712 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30206 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xeoA/info/1xeoA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xeoA/nostruct-align/1xeoA.t06-thin90.a2m.gz, have 121652 columns in 516 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tif/nostruct-align/1tif.t06-thin90.a2m.gz # 1tif.t06-thin90.a2m with 312 sequences, total weight= 12.3273 avg weight= 0.0395104 37 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tif/info/1tif.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tif/nostruct-align/1tif.t06-thin90.a2m.gz, have 121728 columns in 517 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dqpA/nostruct-align/1dqpA.t06-thin90.a2m.gz # 1dqpA.t06-thin90.a2m with 2683 sequences, total weight= 2683 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09319 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dqpA/info/1dqpA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dqpA/nostruct-align/1dqpA.t06-thin90.a2m.gz, have 121958 columns in 518 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nn5A/nostruct-align/1nn5A.t06-thin90.a2m.gz # 1nn5A.t06-thin90.a2m with 10476 sequences, total weight= 10476 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00219 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nn5A/info/1nn5A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nn5A/nostruct-align/1nn5A.t06-thin90.a2m.gz, have 122162 columns in 519 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1z2uA/nostruct-align/1z2uA.t06-thin90.a2m.gz # 1z2uA.t06-thin90.a2m with 1076 sequences, total weight= 512.972 avg weight= 0.47674 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31549 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1z2uA/info/1z2uA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1z/1z2uA/nostruct-align/1z2uA.t06-thin90.a2m.gz, have 122312 columns in 520 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ucrA/nostruct-align/1ucrA.t06-thin90.a2m.gz # 1ucrA.t06-thin90.a2m with 14 sequences, total weight= 5.98814 avg weight= 0.427724 19 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ucrA/info/1ucrA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ucrA/nostruct-align/1ucrA.t06-thin90.a2m.gz, have 122386 columns in 521 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q7lB/nostruct-align/1q7lB.t06-thin90.a2m.gz # 1q7lB.t06-thin90.a2m with 40 sequences, total weight= 4.86028 avg weight= 0.121507 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q7lB/info/1q7lB.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q7lB/nostruct-align/1q7lB.t06-thin90.a2m.gz, have 122474 columns in 522 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s95A/nostruct-align/1s95A.t06-thin90.a2m.gz # 1s95A.t06-thin90.a2m with 1175 sequences, total weight= 1175 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13677 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s95A/info/1s95A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s95A/nostruct-align/1s95A.t06-thin90.a2m.gz, have 122798 columns in 523 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2a0b/nostruct-align/2a0b.t06-thin90.a2m.gz # 2a0b.t06-thin90.a2m with 49 sequences, total weight= 43.8954 avg weight= 0.895824 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2a0b/info/2a0b.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/2a/2a0b/nostruct-align/2a0b.t06-thin90.a2m.gz, have 122916 columns in 524 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t2dA/nostruct-align/1t2dA.t06-thin90.a2m.gz # 1t2dA.t06-thin90.a2m with 1674 sequences, total weight= 1674 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0669 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t2dA/info/1t2dA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t2dA/nostruct-align/1t2dA.t06-thin90.a2m.gz, have 123231 columns in 525 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rg8A/nostruct-align/1rg8A.t06-thin90.a2m.gz # 1rg8A.t06-thin90.a2m with 243 sequences, total weight= 114.622 avg weight= 0.471695 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30169 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rg8A/info/1rg8A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rg8A/nostruct-align/1rg8A.t06-thin90.a2m.gz, have 123372 columns in 526 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1guqA/nostruct-align/1guqA.t06-thin90.a2m.gz # 1guqA.t06-thin90.a2m with 732 sequences, total weight= 732 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26273 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1guqA/info/1guqA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1guqA/nostruct-align/1guqA.t06-thin90.a2m.gz, have 123719 columns in 527 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1go3F/nostruct-align/1go3F.t06-thin90.a2m.gz # 1go3F.t06-thin90.a2m with 29 sequences, total weight= 19.9021 avg weight= 0.68628 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1go3F/info/1go3F.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1go3F/nostruct-align/1go3F.t06-thin90.a2m.gz, have 123826 columns in 528 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2blnA/nostruct-align/2blnA.t06-thin90.a2m.gz # 2blnA.t06-thin90.a2m with 1168 sequences, total weight= 1168 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28537 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2blnA/info/2blnA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/2b/2blnA/nostruct-align/2blnA.t06-thin90.a2m.gz, have 124124 columns in 529 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1ju3A/nostruct-align/1ju3A.t06-thin90.a2m.gz # 1ju3A.t06-thin90.a2m with 10008 sequences, total weight= 10008 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.920327 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1ju3A/info/1ju3A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1ju3A/nostruct-align/1ju3A.t06-thin90.a2m.gz, have 124694 columns in 530 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rcqA/nostruct-align/1rcqA.t06-thin90.a2m.gz # 1rcqA.t06-thin90.a2m with 1595 sequences, total weight= 1595 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12397 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rcqA/info/1rcqA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rcqA/nostruct-align/1rcqA.t06-thin90.a2m.gz, have 125051 columns in 531 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q6oA/nostruct-align/1q6oA.t06-thin90.a2m.gz # 1q6oA.t06-thin90.a2m with 2370 sequences, total weight= 2370 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01578 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q6oA/info/1q6oA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q6oA/nostruct-align/1q6oA.t06-thin90.a2m.gz, have 125264 columns in 532 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pe9A/nostruct-align/1pe9A.t06-thin90.a2m.gz # 1pe9A.t06-thin90.a2m with 297 sequences, total weight= 297 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12827 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pe9A/info/1pe9A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pe9A/nostruct-align/1pe9A.t06-thin90.a2m.gz, have 125625 columns in 533 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2ayh/nostruct-align/2ayh.t06-thin90.a2m.gz # 2ayh.t06-thin90.a2m with 659 sequences, total weight= 659 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15978 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2ayh/info/2ayh.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/2a/2ayh/nostruct-align/2ayh.t06-thin90.a2m.gz, have 125839 columns in 534 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qqqA/nostruct-align/1qqqA.t06-thin90.a2m.gz # 1qqqA.t06-thin90.a2m with 374 sequences, total weight= 43.5758 avg weight= 0.116513 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qqqA/info/1qqqA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qqqA/nostruct-align/1qqqA.t06-thin90.a2m.gz, have 126103 columns in 535 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ucdA/nostruct-align/1ucdA.t06-thin90.a2m.gz # 1ucdA.t06-thin90.a2m with 608 sequences, total weight= 385.043 avg weight= 0.633295 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30745 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ucdA/info/1ucdA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ucdA/nostruct-align/1ucdA.t06-thin90.a2m.gz, have 126293 columns in 536 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xqoA/nostruct-align/1xqoA.t06-thin90.a2m.gz # 1xqoA.t06-thin90.a2m with 9 sequences, total weight= 6.44386 avg weight= 0.715984 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xqoA/info/1xqoA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xqoA/nostruct-align/1xqoA.t06-thin90.a2m.gz, have 126546 columns in 537 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w99A/nostruct-align/1w99A.t06-thin90.a2m.gz # 1w99A.t06-thin90.a2m with 133 sequences, total weight= 133 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25597 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w99A/info/1w99A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w99A/nostruct-align/1w99A.t06-thin90.a2m.gz, have 127104 columns in 538 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o6sB/nostruct-align/1o6sB.t06-thin90.a2m.gz # 1o6sB.t06-thin90.a2m with 5724 sequences, total weight= 5724 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20883 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o6sB/info/1o6sB.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o6sB/nostruct-align/1o6sB.t06-thin90.a2m.gz, have 127208 columns in 539 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jigA/nostruct-align/1jigA.t06-thin90.a2m.gz # 1jigA.t06-thin90.a2m with 535 sequences, total weight= 535 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21594 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jigA/info/1jigA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jigA/nostruct-align/1jigA.t06-thin90.a2m.gz, have 127354 columns in 540 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g8kA/nostruct-align/1g8kA.t06-thin90.a2m.gz # 1g8kA.t06-thin90.a2m with 1296 sequences, total weight= 1296 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12429 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g8kA/info/1g8kA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g8kA/nostruct-align/1g8kA.t06-thin90.a2m.gz, have 128176 columns in 541 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qwyA/nostruct-align/1qwyA.t06-thin90.a2m.gz # 1qwyA.t06-thin90.a2m with 1425 sequences, total weight= 1425 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11159 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qwyA/info/1qwyA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qwyA/nostruct-align/1qwyA.t06-thin90.a2m.gz, have 128410 columns in 542 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r26A/nostruct-align/1r26A.t06-thin90.a2m.gz # 1r26A.t06-thin90.a2m with 4174 sequences, total weight= 4174 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01819 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r26A/info/1r26A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r26A/nostruct-align/1r26A.t06-thin90.a2m.gz, have 128523 columns in 543 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vioA/nostruct-align/1vioA.t06-thin90.a2m.gz # 1vioA.t06-thin90.a2m with 1910 sequences, total weight= 1379.32 avg weight= 0.722158 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30928 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vioA/info/1vioA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vioA/nostruct-align/1vioA.t06-thin90.a2m.gz, have 128753 columns in 544 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i0vA/nostruct-align/1i0vA.t06-thin90.a2m.gz # 1i0vA.t06-thin90.a2m with 36 sequences, total weight= 14.7484 avg weight= 0.409678 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i0vA/info/1i0vA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i0vA/nostruct-align/1i0vA.t06-thin90.a2m.gz, have 128857 columns in 545 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3b/3bamA/nostruct-align/3bamA.t06-thin90.a2m.gz # 3bamA.t06-thin90.a2m with 4 sequences, total weight= 3.87272 avg weight= 0.96818 9 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3b/3bamA/info/3bamA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/3b/3bamA/nostruct-align/3bamA.t06-thin90.a2m.gz, have 129063 columns in 546 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iq4A/nostruct-align/1iq4A.t06-thin90.a2m.gz # 1iq4A.t06-thin90.a2m with 427 sequences, total weight= 38.4998 avg weight= 0.0901636 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iq4A/info/1iq4A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iq4A/nostruct-align/1iq4A.t06-thin90.a2m.gz, have 129242 columns in 547 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gyxA/nostruct-align/1gyxA.t06-thin90.a2m.gz # 1gyxA.t06-thin90.a2m with 10 sequences, total weight= 5.09672 avg weight= 0.509672 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gyxA/info/1gyxA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gyxA/nostruct-align/1gyxA.t06-thin90.a2m.gz, have 129318 columns in 548 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o9rA/nostruct-align/1o9rA.t06-thin90.a2m.gz # 1o9rA.t06-thin90.a2m with 538 sequences, total weight= 538 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16976 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o9rA/info/1o9rA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o9rA/nostruct-align/1o9rA.t06-thin90.a2m.gz, have 129480 columns in 549 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i60A/nostruct-align/1i60A.t06-thin90.a2m.gz # 1i60A.t06-thin90.a2m with 1466 sequences, total weight= 1466 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.869821 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i60A/info/1i60A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i60A/nostruct-align/1i60A.t06-thin90.a2m.gz, have 129758 columns in 550 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t1dA/nostruct-align/1t1dA.t06-thin90.a2m.gz # 1t1dA.t06-thin90.a2m with 370 sequences, total weight= 88.5215 avg weight= 0.239247 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30507 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t1dA/info/1t1dA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t1dA/nostruct-align/1t1dA.t06-thin90.a2m.gz, have 129858 columns in 551 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kkoA/nostruct-align/1kkoA.t06-thin90.a2m.gz # 1kkoA.t06-thin90.a2m with 1413 sequences, total weight= 1413 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1817 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kkoA/info/1kkoA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kkoA/nostruct-align/1kkoA.t06-thin90.a2m.gz, have 130269 columns in 552 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bhuA/nostruct-align/2bhuA.t06-thin90.a2m.gz # 2bhuA.t06-thin90.a2m with 2602 sequences, total weight= 2602 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00468 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bhuA/info/2bhuA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/2b/2bhuA/nostruct-align/2bhuA.t06-thin90.a2m.gz, have 130849 columns in 553 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sauA/nostruct-align/1sauA.t06-thin90.a2m.gz # 1sauA.t06-thin90.a2m with 110 sequences, total weight= 18.6097 avg weight= 0.169179 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sauA/info/1sauA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sauA/nostruct-align/1sauA.t06-thin90.a2m.gz, have 130963 columns in 554 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r4pA/nostruct-align/1r4pA.t06-thin90.a2m.gz # 1r4pA.t06-thin90.a2m with 153 sequences, total weight= 153 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21999 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r4pA/info/1r4pA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r4pA/nostruct-align/1r4pA.t06-thin90.a2m.gz, have 131244 columns in 555 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s1dA/nostruct-align/1s1dA.t06-thin90.a2m.gz # 1s1dA.t06-thin90.a2m with 38 sequences, total weight= 11.5108 avg weight= 0.302916 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s1dA/info/1s1dA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s1dA/nostruct-align/1s1dA.t06-thin90.a2m.gz, have 131561 columns in 556 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y81A/nostruct-align/1y81A.t06-thin90.a2m.gz # 1y81A.t06-thin90.a2m with 605 sequences, total weight= 84.5845 avg weight= 0.139809 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3039 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y81A/info/1y81A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1y81A/nostruct-align/1y81A.t06-thin90.a2m.gz, have 131677 columns in 557 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gca/nostruct-align/1gca.t06-thin90.a2m.gz # 1gca.t06-thin90.a2m with 2745 sequences, total weight= 2745 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.92691 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gca/info/1gca.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gca/nostruct-align/1gca.t06-thin90.a2m.gz, have 131986 columns in 558 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3e/3eipA/nostruct-align/3eipA.t06-thin90.a2m.gz # 3eipA.t06-thin90.a2m with 8 sequences, total weight= 2.82005 avg weight= 0.352506 12 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3e/3eipA/info/3eipA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/3e/3eipA/nostruct-align/3eipA.t06-thin90.a2m.gz, have 132070 columns in 559 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vlaA/nostruct-align/1vlaA.t06-thin90.a2m.gz # 1vlaA.t06-thin90.a2m with 713 sequences, total weight= 713 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11114 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vlaA/info/1vlaA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vlaA/nostruct-align/1vlaA.t06-thin90.a2m.gz, have 132214 columns in 560 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mfmA/nostruct-align/1mfmA.t06-thin90.a2m.gz # 1mfmA.t06-thin90.a2m with 521 sequences, total weight= 74.6104 avg weight= 0.143206 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30176 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mfmA/info/1mfmA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mfmA/nostruct-align/1mfmA.t06-thin90.a2m.gz, have 132367 columns in 561 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1ks9A/nostruct-align/1ks9A.t06-thin90.a2m.gz # 1ks9A.t06-thin90.a2m with 7358 sequences, total weight= 7358 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.825051 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1ks9A/info/1ks9A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1ks9A/nostruct-align/1ks9A.t06-thin90.a2m.gz, have 132658 columns in 562 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1whi/nostruct-align/1whi.t06-thin90.a2m.gz # 1whi.t06-thin90.a2m with 353 sequences, total weight= 19.0433 avg weight= 0.0539469 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1whi/info/1whi.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1whi/nostruct-align/1whi.t06-thin90.a2m.gz, have 132780 columns in 563 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1ayl/nostruct-align/1ayl.t06-thin90.a2m.gz # 1ayl.t06-thin90.a2m with 401 sequences, total weight= 230.757 avg weight= 0.575455 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30267 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1ayl/info/1ayl.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1ayl/nostruct-align/1ayl.t06-thin90.a2m.gz, have 133312 columns in 564 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vns/nostruct-align/1vns.t06-thin90.a2m.gz # 1vns.t06-thin90.a2m with 80 sequences, total weight= 80 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1341 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vns/info/1vns.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vns/nostruct-align/1vns.t06-thin90.a2m.gz, have 133886 columns in 565 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q1fA/nostruct-align/1q1fA.t06-thin90.a2m.gz # 1q1fA.t06-thin90.a2m with 1068 sequences, total weight= 1068 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18443 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q1fA/info/1q1fA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q1fA/nostruct-align/1q1fA.t06-thin90.a2m.gz, have 134034 columns in 566 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/5n/5nul/nostruct-align/5nul.t06-thin90.a2m.gz # 5nul.t06-thin90.a2m with 1595 sequences, total weight= 1595 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0193 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/5n/5nul/info/5nul.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/5n/5nul/nostruct-align/5nul.t06-thin90.a2m.gz, have 134172 columns in 567 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fiuA/nostruct-align/1fiuA.t06-thin90.a2m.gz # 1fiuA.t06-thin90.a2m with 5 sequences, total weight= 3.19348 avg weight= 0.638695 12 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fiuA/info/1fiuA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fiuA/nostruct-align/1fiuA.t06-thin90.a2m.gz, have 134458 columns in 568 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pfvA/nostruct-align/1pfvA.t06-thin90.a2m.gz # 1pfvA.t06-thin90.a2m with 3057 sequences, total weight= 3057 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09769 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pfvA/info/1pfvA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pfvA/nostruct-align/1pfvA.t06-thin90.a2m.gz, have 135005 columns in 569 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1orc/nostruct-align/1orc.t06-thin90.a2m.gz # 1orc.t06-thin90.a2m with 6 sequences, total weight= 3.83526 avg weight= 0.63921 14 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1orc/info/1orc.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1orc/nostruct-align/1orc.t06-thin90.a2m.gz, have 135069 columns in 570 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mhnA/nostruct-align/1mhnA.t06-thin90.a2m.gz # 1mhnA.t06-thin90.a2m with 66 sequences, total weight= 21.6733 avg weight= 0.328383 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mhnA/info/1mhnA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mhnA/nostruct-align/1mhnA.t06-thin90.a2m.gz, have 135128 columns in 571 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1csh/nostruct-align/1csh.t06-thin90.a2m.gz # 1csh.t06-thin90.a2m with 631 sequences, total weight= 124.115 avg weight= 0.196696 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30452 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1csh/info/1csh.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1csh/nostruct-align/1csh.t06-thin90.a2m.gz, have 135563 columns in 572 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t1jA/nostruct-align/1t1jA.t06-thin90.a2m.gz # 1t1jA.t06-thin90.a2m with 5 sequences, total weight= 5 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18295 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t1jA/info/1t1jA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t1jA/nostruct-align/1t1jA.t06-thin90.a2m.gz, have 135682 columns in 573 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rl0A/nostruct-align/1rl0A.t06-thin90.a2m.gz # 1rl0A.t06-thin90.a2m with 151 sequences, total weight= 151 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18579 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rl0A/info/1rl0A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rl0A/nostruct-align/1rl0A.t06-thin90.a2m.gz, have 135937 columns in 574 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d2nA/nostruct-align/1d2nA.t06-thin90.a2m.gz # 1d2nA.t06-thin90.a2m with 10028 sequences, total weight= 10028 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.962198 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d2nA/info/1d2nA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d2nA/nostruct-align/1d2nA.t06-thin90.a2m.gz, have 136183 columns in 575 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e4cP/nostruct-align/1e4cP.t06-thin90.a2m.gz # 1e4cP.t06-thin90.a2m with 663 sequences, total weight= 663 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20817 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e4cP/info/1e4cP.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e4cP/nostruct-align/1e4cP.t06-thin90.a2m.gz, have 136389 columns in 576 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ogqA/nostruct-align/1ogqA.t06-thin90.a2m.gz # 1ogqA.t06-thin90.a2m with 8871 sequences, total weight= 8871 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.971888 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ogqA/info/1ogqA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ogqA/nostruct-align/1ogqA.t06-thin90.a2m.gz, have 136702 columns in 577 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v6sA/nostruct-align/1v6sA.t06-thin90.a2m.gz # 1v6sA.t06-thin90.a2m with 515 sequences, total weight= 15.0338 avg weight= 0.0291918 41 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v6sA/info/1v6sA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v6sA/nostruct-align/1v6sA.t06-thin90.a2m.gz, have 137092 columns in 578 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1njhA/nostruct-align/1njhA.t06-thin90.a2m.gz # 1njhA.t06-thin90.a2m with 14 sequences, total weight= 3.49835 avg weight= 0.249882 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1njhA/info/1njhA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1njhA/nostruct-align/1njhA.t06-thin90.a2m.gz, have 137200 columns in 579 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xfsA/nostruct-align/1xfsA.t06-thin90.a2m.gz # 1xfsA.t06-thin90.a2m with 1085 sequences, total weight= 1085 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.846744 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xfsA/info/1xfsA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xfsA/nostruct-align/1xfsA.t06-thin90.a2m.gz, have 137354 columns in 580 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vr9A/nostruct-align/1vr9A.t06-thin90.a2m.gz # 1vr9A.t06-thin90.a2m with 205 sequences, total weight= 58.9345 avg weight= 0.287486 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30153 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vr9A/info/1vr9A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vr9A/nostruct-align/1vr9A.t06-thin90.a2m.gz, have 137475 columns in 581 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sfxA/nostruct-align/1sfxA.t06-thin90.a2m.gz # 1sfxA.t06-thin90.a2m with 75 sequences, total weight= 75 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24817 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sfxA/info/1sfxA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sfxA/nostruct-align/1sfxA.t06-thin90.a2m.gz, have 137584 columns in 582 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vhsA/nostruct-align/1vhsA.t06-thin90.a2m.gz # 1vhsA.t06-thin90.a2m with 8291 sequences, total weight= 8291 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.792115 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vhsA/info/1vhsA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vhsA/nostruct-align/1vhsA.t06-thin90.a2m.gz, have 137749 columns in 583 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1muwA/nostruct-align/1muwA.t06-thin90.a2m.gz # 1muwA.t06-thin90.a2m with 1249 sequences, total weight= 1249 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.998573 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1muwA/info/1muwA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1muwA/nostruct-align/1muwA.t06-thin90.a2m.gz, have 138135 columns in 584 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rhcA/nostruct-align/1rhcA.t06-thin90.a2m.gz # 1rhcA.t06-thin90.a2m with 1353 sequences, total weight= 1353 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11049 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rhcA/info/1rhcA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rhcA/nostruct-align/1rhcA.t06-thin90.a2m.gz, have 138465 columns in 585 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1orvA/nostruct-align/1orvA.t06-thin90.a2m.gz # 1orvA.t06-thin90.a2m with 8504 sequences, total weight= 8504 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.795087 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1orvA/info/1orvA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1orvA/nostruct-align/1orvA.t06-thin90.a2m.gz, have 139193 columns in 586 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vbiA/nostruct-align/1vbiA.t06-thin90.a2m.gz # 1vbiA.t06-thin90.a2m with 186 sequences, total weight= 47.5558 avg weight= 0.255676 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vbiA/info/1vbiA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vbiA/nostruct-align/1vbiA.t06-thin90.a2m.gz, have 139533 columns in 587 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yiiA/nostruct-align/1yiiA.t06-thin90.a2m.gz # 1yiiA.t06-thin90.a2m with 363 sequences, total weight= 88.9476 avg weight= 0.245035 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30151 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yiiA/info/1yiiA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1yiiA/nostruct-align/1yiiA.t06-thin90.a2m.gz, have 139849 columns in 588 chains # command:CPU_time= 4546.16 sec, elapsed time= 4589.2 sec) # command:# ReportTestByChain quality-reports/dunbrack-30pc-1763-t06-thin90-IDGaaH13-3-13-7-13-9-13-11-tr23-str2-by-chain.test ok. # command:# Testing net dunbrack-30pc-1763-t06-thin90-IDGaaH13-3-13-7-13-9-13-11-tr23-str2-from-empty.net # Initializing Gain for str2 # Initializing Gain for third_layer # Initializing Gain for second_layer # Initializing Gain for FirstLayer # Network initialization done # command:CPU_time= 4595.97 sec, elapsed time= 4639.06 sec) # command: