# command:# Prefix for input files set to # command:# Prefix for output files set to # command:# Seed set to 1174209858 # command:# Read 2 alphabets and 0 BackgroundProbs from /projects/compbio/lib/alphabet/str.alphabet # command:Unrecognized 1th alphabet way-back-11 for BackgroundProbs that has no name Unrecognized 1th alphabet near-backbone-11 for BackgroundProbs that has no name Unrecognized 1th alphabet rel_sa10 for BackgroundProbs that has no name Unrecognized 1th alphabet CB_burial_12_7 for BackgroundProbs that has no name Unrecognized 1th alphabet CB_burial_14_7 for BackgroundProbs that has no name Unrecognized 1th alphabet abs_sa7 for BackgroundProbs that has no name Unrecognized 1th alphabet alpha11 for BackgroundProbs that has no name Unrecognized 1th alphabet Bystroff for BackgroundProbs that has no name Unrecognized 1th alphabet chi1_3 for BackgroundProbs that has no name Unrecognized 1th alphabet dry_burial_6.5_7 for BackgroundProbs that has no name Unrecognized 1th alphabet dry_burial_8_7 for BackgroundProbs that has no name Unrecognized 1th alphabet dry_burial_12_7 for BackgroundProbs that has no name Unrecognized 1th alphabet DSSP for BackgroundProbs that has no name Unrecognized 1th alphabet EBGHSTL for BackgroundProbs that has no name Unrecognized 1th alphabet dssp_ehl2 for BackgroundProbs that has no name Unrecognized 1th alphabet STRIDE for BackgroundProbs that has no name Unrecognized 1th alphabet EBGHTL for BackgroundProbs that has no name Unrecognized 1th alphabet stride_ehl2 for BackgroundProbs that has no name Unrecognized 1th alphabet tco for BackgroundProbs that has no name Unrecognized 1th alphabet wet_burial_6.5_7 for BackgroundProbs that has no name Unrecognized 1th alphabet pb for BackgroundProbs that has no name Unrecognized 1th alphabet gamma_2 for BackgroundProbs that has no name Unrecognized 1th alphabet n_sep for BackgroundProbs that has no name Unrecognized 1th alphabet o_sep for BackgroundProbs that has no name Unrecognized 1th alphabet n_notor for BackgroundProbs that has no name Unrecognized 1th alphabet o_notor for BackgroundProbs that has no name Unrecognized 1th alphabet n_notor2 for BackgroundProbs that has no name Unrecognized 1th alphabet o_notor2 for BackgroundProbs that has no name # Read 0 alphabets and 3 BackgroundProbs from /projects/compbio/lib/alphabet/dunbrack-in-scop.backgrounds # command:CPU_time= 0.003999 sec, elapsed time= 0.021763 sec) # command:# Neural network set to dunbrack-30pc-1763-t06-thin90-IDGaaH13-3-13-7-13-9-13-11-tr12-str2-from-empty.net # command:# command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/predict-2nd/testing/training-data/ # command:# reading script from file dunbrack-30pc-1763-3.t06-thin90-str2 # Prefix for input files set to # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/4u/4ubpA/nostruct-align/4ubpA.t06-thin90.a2m.gz # 4ubpA.t06-thin90.a2m with 139 sequences, total weight= 6.00596 avg weight= 0.0432083 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/4u/4ubpA/info/4ubpA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/4u/4ubpA/nostruct-align/4ubpA.t06-thin90.a2m.gz, have 100 columns in 1 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kngA/nostruct-align/1kngA.t06-thin90.a2m.gz # 1kngA.t06-thin90.a2m with 5206 sequences, total weight= 5206 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00321 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kngA/info/1kngA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kngA/nostruct-align/1kngA.t06-thin90.a2m.gz, have 244 columns in 2 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jnrA/nostruct-align/1jnrA.t06-thin90.a2m.gz # 1jnrA.t06-thin90.a2m with 9813 sequences, total weight= 9813 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.8953 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jnrA/info/1jnrA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jnrA/nostruct-align/1jnrA.t06-thin90.a2m.gz, have 886 columns in 3 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yc5A/nostruct-align/1yc5A.t06-thin90.a2m.gz # 1yc5A.t06-thin90.a2m with 610 sequences, total weight= 610 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29081 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yc5A/info/1yc5A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1yc5A/nostruct-align/1yc5A.t06-thin90.a2m.gz, have 1120 columns in 4 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w2wB/nostruct-align/1w2wB.t06-thin90.a2m.gz # 1w2wB.t06-thin90.a2m with 347 sequences, total weight= 146.457 avg weight= 0.422066 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30372 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w2wB/info/1w2wB.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w2wB/nostruct-align/1w2wB.t06-thin90.a2m.gz, have 1311 columns in 5 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o3uA/nostruct-align/1o3uA.t06-thin90.a2m.gz # 1o3uA.t06-thin90.a2m with 136 sequences, total weight= 136 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16245 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o3uA/info/1o3uA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o3uA/nostruct-align/1o3uA.t06-thin90.a2m.gz, have 1431 columns in 6 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e19A/nostruct-align/1e19A.t06-thin90.a2m.gz # 1e19A.t06-thin90.a2m with 1314 sequences, total weight= 1314 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.218 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e19A/info/1e19A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e19A/nostruct-align/1e19A.t06-thin90.a2m.gz, have 1744 columns in 7 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1z8kA/nostruct-align/1z8kA.t06-thin90.a2m.gz # 1z8kA.t06-thin90.a2m with 13 sequences, total weight= 2.51033 avg weight= 0.193102 13 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1z8kA/info/1z8kA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1z/1z8kA/nostruct-align/1z8kA.t06-thin90.a2m.gz, have 1918 columns in 8 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mtpA/nostruct-align/1mtpA.t06-thin90.a2m.gz # 1mtpA.t06-thin90.a2m with 913 sequences, total weight= 552.287 avg weight= 0.604915 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31049 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mtpA/info/1mtpA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mtpA/nostruct-align/1mtpA.t06-thin90.a2m.gz, have 2238 columns in 9 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ijyA/nostruct-align/1ijyA.t06-thin90.a2m.gz # 1ijyA.t06-thin90.a2m with 186 sequences, total weight= 60.1296 avg weight= 0.323277 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30129 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ijyA/info/1ijyA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ijyA/nostruct-align/1ijyA.t06-thin90.a2m.gz, have 2360 columns in 10 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pg4A/nostruct-align/1pg4A.t06-thin90.a2m.gz # 1pg4A.t06-thin90.a2m with 7573 sequences, total weight= 7573 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05469 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pg4A/info/1pg4A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pg4A/nostruct-align/1pg4A.t06-thin90.a2m.gz, have 2993 columns in 11 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f5nA/nostruct-align/1f5nA.t06-thin90.a2m.gz # 1f5nA.t06-thin90.a2m with 512 sequences, total weight= 512 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.960062 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f5nA/info/1f5nA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f5nA/nostruct-align/1f5nA.t06-thin90.a2m.gz, have 3563 columns in 12 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b5eA/nostruct-align/1b5eA.t06-thin90.a2m.gz # 1b5eA.t06-thin90.a2m with 358 sequences, total weight= 55.2918 avg weight= 0.154446 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b5eA/info/1b5eA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1b5eA/nostruct-align/1b5eA.t06-thin90.a2m.gz, have 3804 columns in 13 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gy7A/nostruct-align/1gy7A.t06-thin90.a2m.gz # 1gy7A.t06-thin90.a2m with 161 sequences, total weight= 117.792 avg weight= 0.731629 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3013 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gy7A/info/1gy7A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gy7A/nostruct-align/1gy7A.t06-thin90.a2m.gz, have 3925 columns in 14 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a3aA/nostruct-align/1a3aA.t06-thin90.a2m.gz # 1a3aA.t06-thin90.a2m with 710 sequences, total weight= 710 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22356 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a3aA/info/1a3aA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1a3aA/nostruct-align/1a3aA.t06-thin90.a2m.gz, have 4070 columns in 15 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w1oA/nostruct-align/1w1oA.t06-thin90.a2m.gz # 1w1oA.t06-thin90.a2m with 2018 sequences, total weight= 2018 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.906905 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w1oA/info/1w1oA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w1oA/nostruct-align/1w1oA.t06-thin90.a2m.gz, have 4549 columns in 16 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gvdA/nostruct-align/1gvdA.t06-thin90.a2m.gz # 1gvdA.t06-thin90.a2m with 970 sequences, total weight= 39.4538 avg weight= 0.040674 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30072 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gvdA/info/1gvdA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gvdA/nostruct-align/1gvdA.t06-thin90.a2m.gz, have 4601 columns in 17 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uj2A/nostruct-align/1uj2A.t06-thin90.a2m.gz # 1uj2A.t06-thin90.a2m with 4309 sequences, total weight= 4309 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.862529 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uj2A/info/1uj2A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uj2A/nostruct-align/1uj2A.t06-thin90.a2m.gz, have 4814 columns in 18 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l7aA/nostruct-align/1l7aA.t06-thin90.a2m.gz # 1l7aA.t06-thin90.a2m with 14433 sequences, total weight= 14433 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.662001 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l7aA/info/1l7aA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1l7aA/nostruct-align/1l7aA.t06-thin90.a2m.gz, have 5132 columns in 19 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kmtA/nostruct-align/1kmtA.t06-thin90.a2m.gz # 1kmtA.t06-thin90.a2m with 74 sequences, total weight= 18.0438 avg weight= 0.243835 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kmtA/info/1kmtA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kmtA/nostruct-align/1kmtA.t06-thin90.a2m.gz, have 5270 columns in 20 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bkxA/nostruct-align/2bkxA.t06-thin90.a2m.gz # 2bkxA.t06-thin90.a2m with 535 sequences, total weight= 171.41 avg weight= 0.320393 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3095 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bkxA/info/2bkxA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/2b/2bkxA/nostruct-align/2bkxA.t06-thin90.a2m.gz, have 5512 columns in 21 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1ji1A/nostruct-align/1ji1A.t06-thin90.a2m.gz # 1ji1A.t06-thin90.a2m with 2458 sequences, total weight= 2458 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03233 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1ji1A/info/1ji1A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1ji1A/nostruct-align/1ji1A.t06-thin90.a2m.gz, have 6149 columns in 22 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1luqA/nostruct-align/1luqA.t06-thin90.a2m.gz # 1luqA.t06-thin90.a2m with 40 sequences, total weight= 17.4952 avg weight= 0.43738 31 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1luqA/info/1luqA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1luqA/nostruct-align/1luqA.t06-thin90.a2m.gz, have 6268 columns in 23 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h2wA/nostruct-align/1h2wA.t06-thin90.a2m.gz # 1h2wA.t06-thin90.a2m with 9022 sequences, total weight= 9022 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.841952 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h2wA/info/1h2wA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h2wA/nostruct-align/1h2wA.t06-thin90.a2m.gz, have 6978 columns in 24 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wvfA/nostruct-align/1wvfA.t06-thin90.a2m.gz # 1wvfA.t06-thin90.a2m with 2037 sequences, total weight= 2037 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.89139 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wvfA/info/1wvfA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wvfA/nostruct-align/1wvfA.t06-thin90.a2m.gz, have 7493 columns in 25 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h2bA/nostruct-align/1h2bA.t06-thin90.a2m.gz # 1h2bA.t06-thin90.a2m with 4994 sequences, total weight= 4994 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1763 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h2bA/info/1h2bA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h2bA/nostruct-align/1h2bA.t06-thin90.a2m.gz, have 7836 columns in 26 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bupA/nostruct-align/1bupA.t06-thin90.a2m.gz # 1bupA.t06-thin90.a2m with 2089 sequences, total weight= 2089 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23706 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bupA/info/1bupA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bupA/nostruct-align/1bupA.t06-thin90.a2m.gz, have 8214 columns in 27 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lm4A/nostruct-align/1lm4A.t06-thin90.a2m.gz # 1lm4A.t06-thin90.a2m with 554 sequences, total weight= 85.4326 avg weight= 0.15421 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30343 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lm4A/info/1lm4A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lm4A/nostruct-align/1lm4A.t06-thin90.a2m.gz, have 8404 columns in 28 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gsoA/nostruct-align/1gsoA.t06-thin90.a2m.gz # 1gsoA.t06-thin90.a2m with 3787 sequences, total weight= 3787 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06105 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gsoA/info/1gsoA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gsoA/nostruct-align/1gsoA.t06-thin90.a2m.gz, have 8823 columns in 29 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d0cA/nostruct-align/1d0cA.t06-thin90.a2m.gz # 1d0cA.t06-thin90.a2m with 98 sequences, total weight= 9.19099 avg weight= 0.0937856 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d0cA/info/1d0cA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d0cA/nostruct-align/1d0cA.t06-thin90.a2m.gz, have 9239 columns in 30 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oaa/nostruct-align/1oaa.t06-thin90.a2m.gz # 1oaa.t06-thin90.a2m with 12501 sequences, total weight= 12501 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11092 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oaa/info/1oaa.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oaa/nostruct-align/1oaa.t06-thin90.a2m.gz, have 9498 columns in 31 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gq6A/nostruct-align/1gq6A.t06-thin90.a2m.gz # 1gq6A.t06-thin90.a2m with 588 sequences, total weight= 588 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21947 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gq6A/info/1gq6A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gq6A/nostruct-align/1gq6A.t06-thin90.a2m.gz, have 9793 columns in 32 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ubkL/nostruct-align/1ubkL.t06-thin90.a2m.gz # 1ubkL.t06-thin90.a2m with 645 sequences, total weight= 580.621 avg weight= 0.900187 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30154 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ubkL/info/1ubkL.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ubkL/nostruct-align/1ubkL.t06-thin90.a2m.gz, have 10327 columns in 33 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uekA/nostruct-align/1uekA.t06-thin90.a2m.gz # 1uekA.t06-thin90.a2m with 1251 sequences, total weight= 1251 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04065 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uekA/info/1uekA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uekA/nostruct-align/1uekA.t06-thin90.a2m.gz, have 10595 columns in 34 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wdvA/nostruct-align/1wdvA.t06-thin90.a2m.gz # 1wdvA.t06-thin90.a2m with 649 sequences, total weight= 649 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21029 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wdvA/info/1wdvA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wdvA/nostruct-align/1wdvA.t06-thin90.a2m.gz, have 10745 columns in 35 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kjlA/nostruct-align/1kjlA.t06-thin90.a2m.gz # 1kjlA.t06-thin90.a2m with 346 sequences, total weight= 262.24 avg weight= 0.757919 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30241 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kjlA/info/1kjlA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kjlA/nostruct-align/1kjlA.t06-thin90.a2m.gz, have 10883 columns in 36 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g2rA/nostruct-align/1g2rA.t06-thin90.a2m.gz # 1g2rA.t06-thin90.a2m with 172 sequences, total weight= 64.9996 avg weight= 0.377905 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30078 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g2rA/info/1g2rA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g2rA/nostruct-align/1g2rA.t06-thin90.a2m.gz, have 10977 columns in 37 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s7kA/nostruct-align/1s7kA.t06-thin90.a2m.gz # 1s7kA.t06-thin90.a2m with 6946 sequences, total weight= 6946 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.827668 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s7kA/info/1s7kA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s7kA/nostruct-align/1s7kA.t06-thin90.a2m.gz, have 11135 columns in 38 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g5tA/nostruct-align/1g5tA.t06-thin90.a2m.gz # 1g5tA.t06-thin90.a2m with 248 sequences, total weight= 19.0567 avg weight= 0.0768413 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g5tA/info/1g5tA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g5tA/nostruct-align/1g5tA.t06-thin90.a2m.gz, have 11292 columns in 39 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e0tA/nostruct-align/1e0tA.t06-thin90.a2m.gz # 1e0tA.t06-thin90.a2m with 587 sequences, total weight= 36.9222 avg weight= 0.0628999 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e0tA/info/1e0tA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e0tA/nostruct-align/1e0tA.t06-thin90.a2m.gz, have 11738 columns in 40 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p0hA/nostruct-align/1p0hA.t06-thin90.a2m.gz # 1p0hA.t06-thin90.a2m with 7870 sequences, total weight= 7870 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.778243 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p0hA/info/1p0hA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p0hA/nostruct-align/1p0hA.t06-thin90.a2m.gz, have 12028 columns in 41 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1molA/nostruct-align/1molA.t06-thin90.a2m.gz # 1molA.t06-thin90.a2m with 3 sequences, total weight= 2.65834 avg weight= 0.886113 6 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1molA/info/1molA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1molA/nostruct-align/1molA.t06-thin90.a2m.gz, have 12122 columns in 42 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1osyA/nostruct-align/1osyA.t06-thin90.a2m.gz # 1osyA.t06-thin90.a2m with 3 sequences, total weight= 2.24944 avg weight= 0.749813 7 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1osyA/info/1osyA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1osyA/nostruct-align/1osyA.t06-thin90.a2m.gz, have 12236 columns in 43 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sbp/nostruct-align/1sbp.t06-thin90.a2m.gz # 1sbp.t06-thin90.a2m with 2956 sequences, total weight= 2956 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.832171 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sbp/info/1sbp.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sbp/nostruct-align/1sbp.t06-thin90.a2m.gz, have 12545 columns in 44 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pvgA/nostruct-align/1pvgA.t06-thin90.a2m.gz # 1pvgA.t06-thin90.a2m with 1196 sequences, total weight= 144.027 avg weight= 0.120424 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30932 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pvgA/info/1pvgA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pvgA/nostruct-align/1pvgA.t06-thin90.a2m.gz, have 12923 columns in 45 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1st9A/nostruct-align/1st9A.t06-thin90.a2m.gz # 1st9A.t06-thin90.a2m with 5376 sequences, total weight= 5376 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.966284 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1st9A/info/1st9A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1st9A/nostruct-align/1st9A.t06-thin90.a2m.gz, have 13060 columns in 46 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f1eA/nostruct-align/1f1eA.t06-thin90.a2m.gz # 1f1eA.t06-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.601427 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f1eA/info/1f1eA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f1eA/nostruct-align/1f1eA.t06-thin90.a2m.gz, have 13211 columns in 47 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ikpA/nostruct-align/1ikpA.t06-thin90.a2m.gz # 1ikpA.t06-thin90.a2m with 282 sequences, total weight= 31.5405 avg weight= 0.111846 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ikpA/info/1ikpA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ikpA/nostruct-align/1ikpA.t06-thin90.a2m.gz, have 13810 columns in 48 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1swxA/nostruct-align/1swxA.t06-thin90.a2m.gz # 1swxA.t06-thin90.a2m with 98 sequences, total weight= 68.2401 avg weight= 0.696328 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1swxA/info/1swxA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1swxA/nostruct-align/1swxA.t06-thin90.a2m.gz, have 14008 columns in 49 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uozA/nostruct-align/1uozA.t06-thin90.a2m.gz # 1uozA.t06-thin90.a2m with 93 sequences, total weight= 21.5323 avg weight= 0.23153 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uozA/info/1uozA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uozA/nostruct-align/1uozA.t06-thin90.a2m.gz, have 14308 columns in 50 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1id0A/nostruct-align/1id0A.t06-thin90.a2m.gz # 1id0A.t06-thin90.a2m with 10391 sequences, total weight= 10391 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21528 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1id0A/info/1id0A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1id0A/nostruct-align/1id0A.t06-thin90.a2m.gz, have 14454 columns in 51 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2m/2mcm/nostruct-align/2mcm.t06-thin90.a2m.gz # 2mcm.t06-thin90.a2m with 8 sequences, total weight= 4.83837 avg weight= 0.604797 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2m/2mcm/info/2mcm.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/2m/2mcm/nostruct-align/2mcm.t06-thin90.a2m.gz, have 14566 columns in 52 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a12A/nostruct-align/1a12A.t06-thin90.a2m.gz # 1a12A.t06-thin90.a2m with 860 sequences, total weight= 860 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02492 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a12A/info/1a12A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1a12A/nostruct-align/1a12A.t06-thin90.a2m.gz, have 14967 columns in 53 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k2xA/nostruct-align/1k2xA.t06-thin90.a2m.gz # 1k2xA.t06-thin90.a2m with 220 sequences, total weight= 38.6482 avg weight= 0.175674 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k2xA/info/1k2xA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k2xA/nostruct-align/1k2xA.t06-thin90.a2m.gz, have 15123 columns in 54 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jp4A/nostruct-align/1jp4A.t06-thin90.a2m.gz # 1jp4A.t06-thin90.a2m with 1278 sequences, total weight= 1278 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.068 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jp4A/info/1jp4A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jp4A/nostruct-align/1jp4A.t06-thin90.a2m.gz, have 15425 columns in 55 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sjyA/nostruct-align/1sjyA.t06-thin90.a2m.gz # 1sjyA.t06-thin90.a2m with 3603 sequences, total weight= 3603 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.862662 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sjyA/info/1sjyA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sjyA/nostruct-align/1sjyA.t06-thin90.a2m.gz, have 15579 columns in 56 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nu4A/nostruct-align/1nu4A.t06-thin90.a2m.gz # 1nu4A.t06-thin90.a2m with 5284 sequences, total weight= 5284 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1591 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nu4A/info/1nu4A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nu4A/nostruct-align/1nu4A.t06-thin90.a2m.gz, have 15670 columns in 57 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j77A/nostruct-align/1j77A.t06-thin90.a2m.gz # 1j77A.t06-thin90.a2m with 190 sequences, total weight= 190 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18925 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j77A/info/1j77A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j77A/nostruct-align/1j77A.t06-thin90.a2m.gz, have 15869 columns in 58 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1btkA/nostruct-align/1btkA.t06-thin90.a2m.gz # 1btkA.t06-thin90.a2m with 186 sequences, total weight= 186 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16289 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1btkA/info/1btkA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1btkA/nostruct-align/1btkA.t06-thin90.a2m.gz, have 16029 columns in 59 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kq1A/nostruct-align/1kq1A.t06-thin90.a2m.gz # 1kq1A.t06-thin90.a2m with 81 sequences, total weight= 7.01477 avg weight= 0.0866021 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kq1A/info/1kq1A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kq1A/nostruct-align/1kq1A.t06-thin90.a2m.gz, have 16089 columns in 60 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1ktgA/nostruct-align/1ktgA.t06-thin90.a2m.gz # 1ktgA.t06-thin90.a2m with 3546 sequences, total weight= 3546 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.924849 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1ktgA/info/1ktgA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1ktgA/nostruct-align/1ktgA.t06-thin90.a2m.gz, have 16226 columns in 61 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ockA/nostruct-align/1ockA.t06-thin90.a2m.gz # 1ockA.t06-thin90.a2m with 1324 sequences, total weight= 371.663 avg weight= 0.280712 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32408 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ockA/info/1ockA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ockA/nostruct-align/1ockA.t06-thin90.a2m.gz, have 16638 columns in 62 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nkgA/nostruct-align/1nkgA.t06-thin90.a2m.gz # 1nkgA.t06-thin90.a2m with 54 sequences, total weight= 25.8623 avg weight= 0.478931 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nkgA/info/1nkgA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nkgA/nostruct-align/1nkgA.t06-thin90.a2m.gz, have 17146 columns in 63 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y80A/nostruct-align/1y80A.t06-thin90.a2m.gz # 1y80A.t06-thin90.a2m with 519 sequences, total weight= 78.6957 avg weight= 0.151629 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3008 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y80A/info/1y80A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1y80A/nostruct-align/1y80A.t06-thin90.a2m.gz, have 17271 columns in 64 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f60B/nostruct-align/1f60B.t06-thin90.a2m.gz # 1f60B.t06-thin90.a2m with 96 sequences, total weight= 10.9788 avg weight= 0.114363 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f60B/info/1f60B.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f60B/nostruct-align/1f60B.t06-thin90.a2m.gz, have 17361 columns in 65 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vcc/nostruct-align/1vcc.t06-thin90.a2m.gz # 1vcc.t06-thin90.a2m with 13 sequences, total weight= 3.1011 avg weight= 0.238546 14 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vcc/info/1vcc.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vcc/nostruct-align/1vcc.t06-thin90.a2m.gz, have 17438 columns in 66 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k3yA/nostruct-align/1k3yA.t06-thin90.a2m.gz # 1k3yA.t06-thin90.a2m with 3427 sequences, total weight= 3427 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.981039 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k3yA/info/1k3yA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k3yA/nostruct-align/1k3yA.t06-thin90.a2m.gz, have 17659 columns in 67 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l6pA/nostruct-align/1l6pA.t06-thin90.a2m.gz # 1l6pA.t06-thin90.a2m with 140 sequences, total weight= 38.6302 avg weight= 0.27593 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30037 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l6pA/info/1l6pA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1l6pA/nostruct-align/1l6pA.t06-thin90.a2m.gz, have 17780 columns in 68 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3n/3nul/nostruct-align/3nul.t06-thin90.a2m.gz # 3nul.t06-thin90.a2m with 150 sequences, total weight= 54.8652 avg weight= 0.365768 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3n/3nul/info/3nul.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/3n/3nul/nostruct-align/3nul.t06-thin90.a2m.gz, have 17910 columns in 69 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f2tB/nostruct-align/1f2tB.t06-thin90.a2m.gz # 1f2tB.t06-thin90.a2m with 19220 sequences, total weight= 19220 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28595 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f2tB/info/1f2tB.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f2tB/nostruct-align/1f2tB.t06-thin90.a2m.gz, have 18053 columns in 70 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u8vA/nostruct-align/1u8vA.t06-thin90.a2m.gz # 1u8vA.t06-thin90.a2m with 813 sequences, total weight= 813 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0589 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u8vA/info/1u8vA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1u8vA/nostruct-align/1u8vA.t06-thin90.a2m.gz, have 18543 columns in 71 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qj4A/nostruct-align/1qj4A.t06-thin90.a2m.gz # 1qj4A.t06-thin90.a2m with 10324 sequences, total weight= 10324 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.690183 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qj4A/info/1qj4A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qj4A/nostruct-align/1qj4A.t06-thin90.a2m.gz, have 18799 columns in 72 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r5mA/nostruct-align/1r5mA.t06-thin90.a2m.gz # 1r5mA.t06-thin90.a2m with 10977 sequences, total weight= 10977 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.740996 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r5mA/info/1r5mA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r5mA/nostruct-align/1r5mA.t06-thin90.a2m.gz, have 19150 columns in 73 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o8bA/nostruct-align/1o8bA.t06-thin90.a2m.gz # 1o8bA.t06-thin90.a2m with 299 sequences, total weight= 17.595 avg weight= 0.0588462 43 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o8bA/info/1o8bA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o8bA/nostruct-align/1o8bA.t06-thin90.a2m.gz, have 19318 columns in 74 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fg7A/nostruct-align/1fg7A.t06-thin90.a2m.gz # 1fg7A.t06-thin90.a2m with 7638 sequences, total weight= 7638 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.922443 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fg7A/info/1fg7A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fg7A/nostruct-align/1fg7A.t06-thin90.a2m.gz, have 19672 columns in 75 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x7dA/nostruct-align/1x7dA.t06-thin90.a2m.gz # 1x7dA.t06-thin90.a2m with 1329 sequences, total weight= 1329 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.996092 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x7dA/info/1x7dA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1x7dA/nostruct-align/1x7dA.t06-thin90.a2m.gz, have 20012 columns in 76 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j2rA/nostruct-align/1j2rA.t06-thin90.a2m.gz # 1j2rA.t06-thin90.a2m with 1027 sequences, total weight= 1027 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14032 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j2rA/info/1j2rA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j2rA/nostruct-align/1j2rA.t06-thin90.a2m.gz, have 20200 columns in 77 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pbyA/nostruct-align/1pbyA.t06-thin90.a2m.gz # 1pbyA.t06-thin90.a2m with 9 sequences, total weight= 4.80901 avg weight= 0.534334 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pbyA/info/1pbyA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pbyA/nostruct-align/1pbyA.t06-thin90.a2m.gz, have 20689 columns in 78 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k5cA/nostruct-align/1k5cA.t06-thin90.a2m.gz # 1k5cA.t06-thin90.a2m with 539 sequences, total weight= 539 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21669 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k5cA/info/1k5cA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k5cA/nostruct-align/1k5cA.t06-thin90.a2m.gz, have 21022 columns in 79 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dj0A/nostruct-align/1dj0A.t06-thin90.a2m.gz # 1dj0A.t06-thin90.a2m with 549 sequences, total weight= 118.444 avg weight= 0.215745 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30998 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dj0A/info/1dj0A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dj0A/nostruct-align/1dj0A.t06-thin90.a2m.gz, have 21286 columns in 80 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wpnA/nostruct-align/1wpnA.t06-thin90.a2m.gz # 1wpnA.t06-thin90.a2m with 441 sequences, total weight= 441 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17589 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wpnA/info/1wpnA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wpnA/nostruct-align/1wpnA.t06-thin90.a2m.gz, have 21473 columns in 81 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q25A/nostruct-align/1q25A.t06-thin90.a2m.gz # 1q25A.t06-thin90.a2m with 264 sequences, total weight= 264 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12169 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q25A/info/1q25A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q25A/nostruct-align/1q25A.t06-thin90.a2m.gz, have 21901 columns in 82 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sz7A/nostruct-align/1sz7A.t06-thin90.a2m.gz # 1sz7A.t06-thin90.a2m with 149 sequences, total weight= 106.412 avg weight= 0.714173 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30049 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sz7A/info/1sz7A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sz7A/nostruct-align/1sz7A.t06-thin90.a2m.gz, have 22060 columns in 83 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hztA/nostruct-align/1hztA.t06-thin90.a2m.gz # 1hztA.t06-thin90.a2m with 3558 sequences, total weight= 3558 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.890189 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hztA/info/1hztA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hztA/nostruct-align/1hztA.t06-thin90.a2m.gz, have 22213 columns in 84 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qopB/nostruct-align/1qopB.t06-thin90.a2m.gz # 1qopB.t06-thin90.a2m with 2439 sequences, total weight= 2439 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1694 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qopB/info/1qopB.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qopB/nostruct-align/1qopB.t06-thin90.a2m.gz, have 22603 columns in 85 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l3lA/nostruct-align/1l3lA.t06-thin90.a2m.gz # 1l3lA.t06-thin90.a2m with 432 sequences, total weight= 432 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.876788 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l3lA/info/1l3lA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1l3lA/nostruct-align/1l3lA.t06-thin90.a2m.gz, have 22836 columns in 86 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ohlA/nostruct-align/1ohlA.t06-thin90.a2m.gz # 1ohlA.t06-thin90.a2m with 375 sequences, total weight= 12.3882 avg weight= 0.0330352 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ohlA/info/1ohlA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ohlA/nostruct-align/1ohlA.t06-thin90.a2m.gz, have 23176 columns in 87 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oygA/nostruct-align/1oygA.t06-thin90.a2m.gz # 1oygA.t06-thin90.a2m with 434 sequences, total weight= 434 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19686 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oygA/info/1oygA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oygA/nostruct-align/1oygA.t06-thin90.a2m.gz, have 23616 columns in 88 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1khcA/nostruct-align/1khcA.t06-thin90.a2m.gz # 1khcA.t06-thin90.a2m with 265 sequences, total weight= 265 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.043 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1khcA/info/1khcA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1khcA/nostruct-align/1khcA.t06-thin90.a2m.gz, have 23751 columns in 89 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ugpA/nostruct-align/1ugpA.t06-thin90.a2m.gz # 1ugpA.t06-thin90.a2m with 56 sequences, total weight= 8.98806 avg weight= 0.160501 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ugpA/info/1ugpA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ugpA/nostruct-align/1ugpA.t06-thin90.a2m.gz, have 23954 columns in 90 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rmwA/nostruct-align/1rmwA.t06-thin90.a2m.gz # 1rmwA.t06-thin90.a2m with 180 sequences, total weight= 180 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11417 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rmwA/info/1rmwA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rmwA/nostruct-align/1rmwA.t06-thin90.a2m.gz, have 24165 columns in 91 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m93B/nostruct-align/1m93B.t06-thin90.a2m.gz # 1m93B.t06-thin90.a2m with 816 sequences, total weight= 262.724 avg weight= 0.321966 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31371 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m93B/info/1m93B.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m93B/nostruct-align/1m93B.t06-thin90.a2m.gz, have 24410 columns in 92 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vr7A/nostruct-align/1vr7A.t06-thin90.a2m.gz # 1vr7A.t06-thin90.a2m with 139 sequences, total weight= 33.847 avg weight= 0.243503 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vr7A/info/1vr7A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vr7A/nostruct-align/1vr7A.t06-thin90.a2m.gz, have 24530 columns in 93 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1ve1A/nostruct-align/1ve1A.t06-thin90.a2m.gz # 1ve1A.t06-thin90.a2m with 2460 sequences, total weight= 2460 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2335 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1ve1A/info/1ve1A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1ve1A/nostruct-align/1ve1A.t06-thin90.a2m.gz, have 24832 columns in 94 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1twyA/nostruct-align/1twyA.t06-thin90.a2m.gz # 1twyA.t06-thin90.a2m with 1672 sequences, total weight= 1672 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.987187 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1twyA/info/1twyA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1twyA/nostruct-align/1twyA.t06-thin90.a2m.gz, have 25081 columns in 95 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d4tA/nostruct-align/1d4tA.t06-thin90.a2m.gz # 1d4tA.t06-thin90.a2m with 855 sequences, total weight= 763.756 avg weight= 0.893282 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3028 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d4tA/info/1d4tA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d4tA/nostruct-align/1d4tA.t06-thin90.a2m.gz, have 25185 columns in 96 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2p/2pth/nostruct-align/2pth.t06-thin90.a2m.gz # 2pth.t06-thin90.a2m with 393 sequences, total weight= 36.0083 avg weight= 0.0916242 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30048 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2p/2pth/info/2pth.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/2p/2pth/nostruct-align/2pth.t06-thin90.a2m.gz, have 25378 columns in 97 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sg6A/nostruct-align/1sg6A.t06-thin90.a2m.gz # 1sg6A.t06-thin90.a2m with 1326 sequences, total weight= 1326 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15863 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sg6A/info/1sg6A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sg6A/nostruct-align/1sg6A.t06-thin90.a2m.gz, have 25755 columns in 98 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gxyA/nostruct-align/1gxyA.t06-thin90.a2m.gz # 1gxyA.t06-thin90.a2m with 72 sequences, total weight= 11.104 avg weight= 0.154222 31 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gxyA/info/1gxyA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gxyA/nostruct-align/1gxyA.t06-thin90.a2m.gz, have 25978 columns in 99 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hh8A/nostruct-align/1hh8A.t06-thin90.a2m.gz # 1hh8A.t06-thin90.a2m with 10755 sequences, total weight= 10755 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.744289 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hh8A/info/1hh8A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hh8A/nostruct-align/1hh8A.t06-thin90.a2m.gz, have 26170 columns in 100 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1df4A/nostruct-align/1df4A.t06-thin90.a2m.gz # 1df4A.t06-thin90.a2m with 947 sequences, total weight= 9.06667 avg weight= 0.0095741 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1df4A/info/1df4A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1df4A/nostruct-align/1df4A.t06-thin90.a2m.gz, have 26227 columns in 101 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kyhA/nostruct-align/1kyhA.t06-thin90.a2m.gz # 1kyhA.t06-thin90.a2m with 2487 sequences, total weight= 2487 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.977782 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kyhA/info/1kyhA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kyhA/nostruct-align/1kyhA.t06-thin90.a2m.gz, have 26495 columns in 102 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u84A/nostruct-align/1u84A.t06-thin90.a2m.gz # 1u84A.t06-thin90.a2m with 7 sequences, total weight= 5.27658 avg weight= 0.753797 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u84A/info/1u84A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1u84A/nostruct-align/1u84A.t06-thin90.a2m.gz, have 26576 columns in 103 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nu0A/nostruct-align/1nu0A.t06-thin90.a2m.gz # 1nu0A.t06-thin90.a2m with 344 sequences, total weight= 46.9677 avg weight= 0.136534 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30132 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nu0A/info/1nu0A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nu0A/nostruct-align/1nu0A.t06-thin90.a2m.gz, have 26707 columns in 104 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t06-thin90.a2m.gz # 1dciA.t06-thin90.a2m with 3043 sequences, total weight= 3043 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1588 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t06-thin90.a2m.gz, have 26982 columns in 105 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xdnA/nostruct-align/1xdnA.t06-thin90.a2m.gz # 1xdnA.t06-thin90.a2m with 12 sequences, total weight= 8.11753 avg weight= 0.676461 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xdnA/info/1xdnA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xdnA/nostruct-align/1xdnA.t06-thin90.a2m.gz, have 27247 columns in 106 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tr9A/nostruct-align/1tr9A.t06-thin90.a2m.gz # 1tr9A.t06-thin90.a2m with 862 sequences, total weight= 428.849 avg weight= 0.497504 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31232 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tr9A/info/1tr9A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tr9A/nostruct-align/1tr9A.t06-thin90.a2m.gz, have 27577 columns in 107 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k6kA/nostruct-align/1k6kA.t06-thin90.a2m.gz # 1k6kA.t06-thin90.a2m with 312 sequences, total weight= 92.7493 avg weight= 0.297273 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30404 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k6kA/info/1k6kA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k6kA/nostruct-align/1k6kA.t06-thin90.a2m.gz, have 27719 columns in 108 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h4rA/nostruct-align/1h4rA.t06-thin90.a2m.gz # 1h4rA.t06-thin90.a2m with 586 sequences, total weight= 586 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09565 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h4rA/info/1h4rA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h4rA/nostruct-align/1h4rA.t06-thin90.a2m.gz, have 28013 columns in 109 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ryiA/nostruct-align/1ryiA.t06-thin90.a2m.gz # 1ryiA.t06-thin90.a2m with 11083 sequences, total weight= 11083 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.731037 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ryiA/info/1ryiA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1ryiA/nostruct-align/1ryiA.t06-thin90.a2m.gz, have 28377 columns in 110 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j30A/nostruct-align/1j30A.t06-thin90.a2m.gz # 1j30A.t06-thin90.a2m with 232 sequences, total weight= 120.58 avg weight= 0.519742 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30274 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j30A/info/1j30A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j30A/nostruct-align/1j30A.t06-thin90.a2m.gz, have 28518 columns in 111 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ezgA/nostruct-align/1ezgA.t06-thin90.a2m.gz # 1ezgA.t06-thin90.a2m with 22 sequences, total weight= 2.69687 avg weight= 0.122585 15 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ezgA/info/1ezgA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ezgA/nostruct-align/1ezgA.t06-thin90.a2m.gz, have 28600 columns in 112 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nzjA/nostruct-align/1nzjA.t06-thin90.a2m.gz # 1nzjA.t06-thin90.a2m with 1311 sequences, total weight= 1311 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19403 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nzjA/info/1nzjA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nzjA/nostruct-align/1nzjA.t06-thin90.a2m.gz, have 28873 columns in 113 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n62C/nostruct-align/1n62C.t06-thin90.a2m.gz # 1n62C.t06-thin90.a2m with 500 sequences, total weight= 500 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29896 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n62C/info/1n62C.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n62C/nostruct-align/1n62C.t06-thin90.a2m.gz, have 29159 columns in 114 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t3iA/nostruct-align/1t3iA.t06-thin90.a2m.gz # 1t3iA.t06-thin90.a2m with 11608 sequences, total weight= 11608 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.813817 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t3iA/info/1t3iA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t3iA/nostruct-align/1t3iA.t06-thin90.a2m.gz, have 29565 columns in 115 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tzvA/nostruct-align/1tzvA.t06-thin90.a2m.gz # 1tzvA.t06-thin90.a2m with 594 sequences, total weight= 594 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26251 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tzvA/info/1tzvA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tzvA/nostruct-align/1tzvA.t06-thin90.a2m.gz, have 29706 columns in 116 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nuyA/nostruct-align/1nuyA.t06-thin90.a2m.gz # 1nuyA.t06-thin90.a2m with 1028 sequences, total weight= 1028 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28365 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nuyA/info/1nuyA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nuyA/nostruct-align/1nuyA.t06-thin90.a2m.gz, have 30034 columns in 117 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xocA/nostruct-align/1xocA.t06-thin90.a2m.gz # 1xocA.t06-thin90.a2m with 1961 sequences, total weight= 1961 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07402 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xocA/info/1xocA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xocA/nostruct-align/1xocA.t06-thin90.a2m.gz, have 30538 columns in 118 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k0mA/nostruct-align/1k0mA.t06-thin90.a2m.gz # 1k0mA.t06-thin90.a2m with 3593 sequences, total weight= 3593 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.934362 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k0mA/info/1k0mA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k0mA/nostruct-align/1k0mA.t06-thin90.a2m.gz, have 30773 columns in 119 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v5dA/nostruct-align/1v5dA.t06-thin90.a2m.gz # 1v5dA.t06-thin90.a2m with 101 sequences, total weight= 101 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16936 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v5dA/info/1v5dA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v5dA/nostruct-align/1v5dA.t06-thin90.a2m.gz, have 31159 columns in 120 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ekgA/nostruct-align/1ekgA.t06-thin90.a2m.gz # 1ekgA.t06-thin90.a2m with 124 sequences, total weight= 39.3672 avg weight= 0.317478 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ekgA/info/1ekgA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ekgA/nostruct-align/1ekgA.t06-thin90.a2m.gz, have 31278 columns in 121 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v33A/nostruct-align/1v33A.t06-thin90.a2m.gz # 1v33A.t06-thin90.a2m with 129 sequences, total weight= 129 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25571 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v33A/info/1v33A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v33A/nostruct-align/1v33A.t06-thin90.a2m.gz, have 31624 columns in 122 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1es5A/nostruct-align/1es5A.t06-thin90.a2m.gz # 1es5A.t06-thin90.a2m with 979 sequences, total weight= 979 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08361 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1es5A/info/1es5A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1es5A/nostruct-align/1es5A.t06-thin90.a2m.gz, have 31884 columns in 123 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m7yA/nostruct-align/1m7yA.t06-thin90.a2m.gz # 1m7yA.t06-thin90.a2m with 7372 sequences, total weight= 7372 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.889016 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m7yA/info/1m7yA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m7yA/nostruct-align/1m7yA.t06-thin90.a2m.gz, have 32308 columns in 124 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qauA/nostruct-align/1qauA.t06-thin90.a2m.gz # 1qauA.t06-thin90.a2m with 2441 sequences, total weight= 2441 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06924 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qauA/info/1qauA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qauA/nostruct-align/1qauA.t06-thin90.a2m.gz, have 32420 columns in 125 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vrmA/nostruct-align/1vrmA.t06-thin90.a2m.gz # 1vrmA.t06-thin90.a2m with 331 sequences, total weight= 112.149 avg weight= 0.33882 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30405 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vrmA/info/1vrmA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vrmA/nostruct-align/1vrmA.t06-thin90.a2m.gz, have 32729 columns in 126 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1ne2A/nostruct-align/1ne2A.t06-thin90.a2m.gz # 1ne2A.t06-thin90.a2m with 12721 sequences, total weight= 12721 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.755981 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1ne2A/info/1ne2A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1ne2A/nostruct-align/1ne2A.t06-thin90.a2m.gz, have 32905 columns in 127 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e6cA/nostruct-align/1e6cA.t06-thin90.a2m.gz # 1e6cA.t06-thin90.a2m with 7198 sequences, total weight= 7198 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.838792 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e6cA/info/1e6cA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e6cA/nostruct-align/1e6cA.t06-thin90.a2m.gz, have 33075 columns in 128 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ooyA/nostruct-align/1ooyA.t06-thin90.a2m.gz # 1ooyA.t06-thin90.a2m with 773 sequences, total weight= 773 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.293 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ooyA/info/1ooyA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ooyA/nostruct-align/1ooyA.t06-thin90.a2m.gz, have 33538 columns in 129 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ojrA/nostruct-align/1ojrA.t06-thin90.a2m.gz # 1ojrA.t06-thin90.a2m with 665 sequences, total weight= 665 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11017 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ojrA/info/1ojrA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ojrA/nostruct-align/1ojrA.t06-thin90.a2m.gz, have 33812 columns in 130 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xauA/nostruct-align/1xauA.t06-thin90.a2m.gz # 1xauA.t06-thin90.a2m with 5 sequences, total weight= 3.04299 avg weight= 0.608598 11 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xauA/info/1xauA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xauA/nostruct-align/1xauA.t06-thin90.a2m.gz, have 33916 columns in 131 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sbxA/nostruct-align/1sbxA.t06-thin90.a2m.gz # 1sbxA.t06-thin90.a2m with 43 sequences, total weight= 7.70133 avg weight= 0.179101 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sbxA/info/1sbxA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sbxA/nostruct-align/1sbxA.t06-thin90.a2m.gz, have 34022 columns in 132 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h4pA/nostruct-align/1h4pA.t06-thin90.a2m.gz # 1h4pA.t06-thin90.a2m with 2253 sequences, total weight= 2253 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.905794 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h4pA/info/1h4pA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h4pA/nostruct-align/1h4pA.t06-thin90.a2m.gz, have 34430 columns in 133 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xs0A/nostruct-align/1xs0A.t06-thin90.a2m.gz # 1xs0A.t06-thin90.a2m with 20 sequences, total weight= 11.3756 avg weight= 0.568781 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xs0A/info/1xs0A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xs0A/nostruct-align/1xs0A.t06-thin90.a2m.gz, have 34558 columns in 134 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sx5A/nostruct-align/1sx5A.t06-thin90.a2m.gz # 1sx5A.t06-thin90.a2m with 5 sequences, total weight= 4.59982 avg weight= 0.919963 11 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sx5A/info/1sx5A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sx5A/nostruct-align/1sx5A.t06-thin90.a2m.gz, have 34802 columns in 135 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qy1A/nostruct-align/1qy1A.t06-thin90.a2m.gz # 1qy1A.t06-thin90.a2m with 539 sequences, total weight= 539 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03113 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qy1A/info/1qy1A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qy1A/nostruct-align/1qy1A.t06-thin90.a2m.gz, have 34959 columns in 136 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2igd/nostruct-align/2igd.t06-thin90.a2m.gz # 2igd.t06-thin90.a2m with 15 sequences, total weight= 3.39421 avg weight= 0.22628 14 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2igd/info/2igd.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/2i/2igd/nostruct-align/2igd.t06-thin90.a2m.gz, have 35020 columns in 137 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lc0A/nostruct-align/1lc0A.t06-thin90.a2m.gz # 1lc0A.t06-thin90.a2m with 3251 sequences, total weight= 3251 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.875065 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lc0A/info/1lc0A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lc0A/nostruct-align/1lc0A.t06-thin90.a2m.gz, have 35310 columns in 138 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v30A/nostruct-align/1v30A.t06-thin90.a2m.gz # 1v30A.t06-thin90.a2m with 10 sequences, total weight= 10 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20528 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v30A/info/1v30A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v30A/nostruct-align/1v30A.t06-thin90.a2m.gz, have 35428 columns in 139 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dfuP/nostruct-align/1dfuP.t06-thin90.a2m.gz # 1dfuP.t06-thin90.a2m with 262 sequences, total weight= 30.8623 avg weight= 0.117795 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dfuP/info/1dfuP.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dfuP/nostruct-align/1dfuP.t06-thin90.a2m.gz, have 35522 columns in 140 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1po5A/nostruct-align/1po5A.t06-thin90.a2m.gz # 1po5A.t06-thin90.a2m with 5700 sequences, total weight= 5700 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00629 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1po5A/info/1po5A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1po5A/nostruct-align/1po5A.t06-thin90.a2m.gz, have 35987 columns in 141 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1md6A/nostruct-align/1md6A.t06-thin90.a2m.gz # 1md6A.t06-thin90.a2m with 125 sequences, total weight= 41.5828 avg weight= 0.332663 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1md6A/info/1md6A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1md6A/nostruct-align/1md6A.t06-thin90.a2m.gz, have 36141 columns in 142 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qwrA/nostruct-align/1qwrA.t06-thin90.a2m.gz # 1qwrA.t06-thin90.a2m with 266 sequences, total weight= 114.19 avg weight= 0.429286 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30284 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qwrA/info/1qwrA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qwrA/nostruct-align/1qwrA.t06-thin90.a2m.gz, have 36456 columns in 143 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uwkA/nostruct-align/1uwkA.t06-thin90.a2m.gz # 1uwkA.t06-thin90.a2m with 139 sequences, total weight= 6.86368 avg weight= 0.049379 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uwkA/info/1uwkA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uwkA/nostruct-align/1uwkA.t06-thin90.a2m.gz, have 37010 columns in 144 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1upqA/nostruct-align/1upqA.t06-thin90.a2m.gz # 1upqA.t06-thin90.a2m with 1943 sequences, total weight= 1943 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.952654 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1upqA/info/1upqA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1upqA/nostruct-align/1upqA.t06-thin90.a2m.gz, have 37117 columns in 145 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pwgA/nostruct-align/1pwgA.t06-thin90.a2m.gz # 1pwgA.t06-thin90.a2m with 1362 sequences, total weight= 1362 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.979061 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pwgA/info/1pwgA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pwgA/nostruct-align/1pwgA.t06-thin90.a2m.gz, have 37462 columns in 146 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jx6A/nostruct-align/1jx6A.t06-thin90.a2m.gz # 1jx6A.t06-thin90.a2m with 3088 sequences, total weight= 3088 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.945131 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jx6A/info/1jx6A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jx6A/nostruct-align/1jx6A.t06-thin90.a2m.gz, have 37800 columns in 147 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tqgA/nostruct-align/1tqgA.t06-thin90.a2m.gz # 1tqgA.t06-thin90.a2m with 475 sequences, total weight= 361.534 avg weight= 0.761125 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30471 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tqgA/info/1tqgA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tqgA/nostruct-align/1tqgA.t06-thin90.a2m.gz, have 37905 columns in 148 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f5vA/nostruct-align/1f5vA.t06-thin90.a2m.gz # 1f5vA.t06-thin90.a2m with 1275 sequences, total weight= 1275 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11558 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f5vA/info/1f5vA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f5vA/nostruct-align/1f5vA.t06-thin90.a2m.gz, have 38145 columns in 149 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fcqA/nostruct-align/1fcqA.t06-thin90.a2m.gz # 1fcqA.t06-thin90.a2m with 81 sequences, total weight= 14.0389 avg weight= 0.17332 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fcqA/info/1fcqA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fcqA/nostruct-align/1fcqA.t06-thin90.a2m.gz, have 38459 columns in 150 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pbyB/nostruct-align/1pbyB.t06-thin90.a2m.gz # 1pbyB.t06-thin90.a2m with 7947 sequences, total weight= 7947 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.682326 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pbyB/info/1pbyB.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pbyB/nostruct-align/1pbyB.t06-thin90.a2m.gz, have 38796 columns in 151 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b3aA/nostruct-align/1b3aA.t06-thin90.a2m.gz # 1b3aA.t06-thin90.a2m with 354 sequences, total weight= 92.1522 avg weight= 0.260317 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30481 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b3aA/info/1b3aA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1b3aA/nostruct-align/1b3aA.t06-thin90.a2m.gz, have 38863 columns in 152 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dqzA/nostruct-align/1dqzA.t06-thin90.a2m.gz # 1dqzA.t06-thin90.a2m with 5616 sequences, total weight= 5616 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.659351 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dqzA/info/1dqzA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dqzA/nostruct-align/1dqzA.t06-thin90.a2m.gz, have 39143 columns in 153 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rkuA/nostruct-align/1rkuA.t06-thin90.a2m.gz # 1rkuA.t06-thin90.a2m with 7400 sequences, total weight= 7400 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.895135 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rkuA/info/1rkuA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rkuA/nostruct-align/1rkuA.t06-thin90.a2m.gz, have 39349 columns in 154 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hfeS/nostruct-align/1hfeS.t06-thin90.a2m.gz # 1hfeS.t06-thin90.a2m with 62 sequences, total weight= 19.1304 avg weight= 0.308554 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hfeS/info/1hfeS.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hfeS/nostruct-align/1hfeS.t06-thin90.a2m.gz, have 39437 columns in 155 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nnhA/nostruct-align/1nnhA.t06-thin90.a2m.gz # 1nnhA.t06-thin90.a2m with 1847 sequences, total weight= 1847 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19205 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nnhA/info/1nnhA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nnhA/nostruct-align/1nnhA.t06-thin90.a2m.gz, have 39730 columns in 156 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vkiA/nostruct-align/1vkiA.t06-thin90.a2m.gz # 1vkiA.t06-thin90.a2m with 611 sequences, total weight= 611 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23376 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vkiA/info/1vkiA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vkiA/nostruct-align/1vkiA.t06-thin90.a2m.gz, have 39895 columns in 157 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o66A/nostruct-align/1o66A.t06-thin90.a2m.gz # 1o66A.t06-thin90.a2m with 316 sequences, total weight= 13.1355 avg weight= 0.0415679 37 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o66A/info/1o66A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o66A/nostruct-align/1o66A.t06-thin90.a2m.gz, have 40144 columns in 158 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xfkA/nostruct-align/1xfkA.t06-thin90.a2m.gz # 1xfkA.t06-thin90.a2m with 595 sequences, total weight= 595 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21057 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xfkA/info/1xfkA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xfkA/nostruct-align/1xfkA.t06-thin90.a2m.gz, have 40468 columns in 159 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ybiA/nostruct-align/1ybiA.t06-thin90.a2m.gz # 1ybiA.t06-thin90.a2m with 367 sequences, total weight= 367 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02009 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ybiA/info/1ybiA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1ybiA/nostruct-align/1ybiA.t06-thin90.a2m.gz, have 40752 columns in 160 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vicA/nostruct-align/1vicA.t06-thin90.a2m.gz # 1vicA.t06-thin90.a2m with 3685 sequences, total weight= 3685 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.941251 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vicA/info/1vicA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vicA/nostruct-align/1vicA.t06-thin90.a2m.gz, have 41007 columns in 161 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j6oA/nostruct-align/1j6oA.t06-thin90.a2m.gz # 1j6oA.t06-thin90.a2m with 882 sequences, total weight= 882 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17363 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j6oA/info/1j6oA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j6oA/nostruct-align/1j6oA.t06-thin90.a2m.gz, have 41267 columns in 162 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tukA/nostruct-align/1tukA.t06-thin90.a2m.gz # 1tukA.t06-thin90.a2m with 69 sequences, total weight= 14.3458 avg weight= 0.20791 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tukA/info/1tukA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tukA/nostruct-align/1tukA.t06-thin90.a2m.gz, have 41334 columns in 163 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h4aX/nostruct-align/1h4aX.t06-thin90.a2m.gz # 1h4aX.t06-thin90.a2m with 280 sequences, total weight= 53.7187 avg weight= 0.191853 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h4aX/info/1h4aX.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h4aX/nostruct-align/1h4aX.t06-thin90.a2m.gz, have 41507 columns in 164 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xteA/nostruct-align/1xteA.t06-thin90.a2m.gz # 1xteA.t06-thin90.a2m with 658 sequences, total weight= 658 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11111 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xteA/info/1xteA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xteA/nostruct-align/1xteA.t06-thin90.a2m.gz, have 41623 columns in 165 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i1wA/nostruct-align/1i1wA.t06-thin90.a2m.gz # 1i1wA.t06-thin90.a2m with 618 sequences, total weight= 618 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02794 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i1wA/info/1i1wA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i1wA/nostruct-align/1i1wA.t06-thin90.a2m.gz, have 41926 columns in 166 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1ten/nostruct-align/1ten.t06-thin90.a2m.gz # 1ten.t06-thin90.a2m with 4672 sequences, total weight= 4672 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11383 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1ten/info/1ten.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1ten/nostruct-align/1ten.t06-thin90.a2m.gz, have 42015 columns in 167 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cb0A/nostruct-align/1cb0A.t06-thin90.a2m.gz # 1cb0A.t06-thin90.a2m with 933 sequences, total weight= 933 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1181 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cb0A/info/1cb0A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cb0A/nostruct-align/1cb0A.t06-thin90.a2m.gz, have 42283 columns in 168 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oalA/nostruct-align/1oalA.t06-thin90.a2m.gz # 1oalA.t06-thin90.a2m with 479 sequences, total weight= 50.9225 avg weight= 0.10631 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3008 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oalA/info/1oalA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oalA/nostruct-align/1oalA.t06-thin90.a2m.gz, have 42434 columns in 169 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1deuA/nostruct-align/1deuA.t06-thin90.a2m.gz # 1deuA.t06-thin90.a2m with 1596 sequences, total weight= 1596 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20976 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1deuA/info/1deuA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1deuA/nostruct-align/1deuA.t06-thin90.a2m.gz, have 42709 columns in 170 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ygtA/nostruct-align/1ygtA.t06-thin90.a2m.gz # 1ygtA.t06-thin90.a2m with 124 sequences, total weight= 66.0134 avg weight= 0.532366 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30042 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ygtA/info/1ygtA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1ygtA/nostruct-align/1ygtA.t06-thin90.a2m.gz, have 42813 columns in 171 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oh0A/nostruct-align/1oh0A.t06-thin90.a2m.gz # 1oh0A.t06-thin90.a2m with 1108 sequences, total weight= 1108 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.829527 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oh0A/info/1oh0A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oh0A/nostruct-align/1oh0A.t06-thin90.a2m.gz, have 42938 columns in 172 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1byi/nostruct-align/1byi.t06-thin90.a2m.gz # 1byi.t06-thin90.a2m with 4120 sequences, total weight= 4120 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.932475 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1byi/info/1byi.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1byi/nostruct-align/1byi.t06-thin90.a2m.gz, have 43162 columns in 173 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wkqA/nostruct-align/1wkqA.t06-thin90.a2m.gz # 1wkqA.t06-thin90.a2m with 1333 sequences, total weight= 1333 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17481 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wkqA/info/1wkqA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wkqA/nostruct-align/1wkqA.t06-thin90.a2m.gz, have 43320 columns in 174 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eexG/nostruct-align/1eexG.t06-thin90.a2m.gz # 1eexG.t06-thin90.a2m with 19 sequences, total weight= 4.65636 avg weight= 0.245072 19 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eexG/info/1eexG.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1eexG/nostruct-align/1eexG.t06-thin90.a2m.gz, have 43457 columns in 175 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m0kA/nostruct-align/1m0kA.t06-thin90.a2m.gz # 1m0kA.t06-thin90.a2m with 173 sequences, total weight= 66.4454 avg weight= 0.384077 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m0kA/info/1m0kA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m0kA/nostruct-align/1m0kA.t06-thin90.a2m.gz, have 43679 columns in 176 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t0tV/nostruct-align/1t0tV.t06-thin90.a2m.gz # 1t0tV.t06-thin90.a2m with 79 sequences, total weight= 45.0824 avg weight= 0.570664 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t0tV/info/1t0tV.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t0tV/nostruct-align/1t0tV.t06-thin90.a2m.gz, have 43922 columns in 177 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m6pA/nostruct-align/1m6pA.t06-thin90.a2m.gz # 1m6pA.t06-thin90.a2m with 332 sequences, total weight= 332 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23559 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m6pA/info/1m6pA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m6pA/nostruct-align/1m6pA.t06-thin90.a2m.gz, have 44068 columns in 178 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e6uA/nostruct-align/1e6uA.t06-thin90.a2m.gz # 1e6uA.t06-thin90.a2m with 11410 sequences, total weight= 11410 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.923237 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e6uA/info/1e6uA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e6uA/nostruct-align/1e6uA.t06-thin90.a2m.gz, have 44383 columns in 179 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q5yA/nostruct-align/1q5yA.t06-thin90.a2m.gz # 1q5yA.t06-thin90.a2m with 73 sequences, total weight= 16.2731 avg weight= 0.222919 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q5yA/info/1q5yA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q5yA/nostruct-align/1q5yA.t06-thin90.a2m.gz, have 44467 columns in 180 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r0rI/nostruct-align/1r0rI.t06-thin90.a2m.gz # 1r0rI.t06-thin90.a2m with 186 sequences, total weight= 26.1502 avg weight= 0.140592 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30035 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r0rI/info/1r0rI.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r0rI/nostruct-align/1r0rI.t06-thin90.a2m.gz, have 44518 columns in 181 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w2yA/nostruct-align/1w2yA.t06-thin90.a2m.gz # 1w2yA.t06-thin90.a2m with 59 sequences, total weight= 50.768 avg weight= 0.860475 41 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w2yA/info/1w2yA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w2yA/nostruct-align/1w2yA.t06-thin90.a2m.gz, have 44744 columns in 182 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e7wA/nostruct-align/1e7wA.t06-thin90.a2m.gz # 1e7wA.t06-thin90.a2m with 11445 sequences, total weight= 11445 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16967 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e7wA/info/1e7wA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e7wA/nostruct-align/1e7wA.t06-thin90.a2m.gz, have 45011 columns in 183 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lopA/nostruct-align/1lopA.t06-thin90.a2m.gz # 1lopA.t06-thin90.a2m with 1400 sequences, total weight= 84.2775 avg weight= 0.0601982 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30467 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lopA/info/1lopA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lopA/nostruct-align/1lopA.t06-thin90.a2m.gz, have 45175 columns in 184 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1ty9A/nostruct-align/1ty9A.t06-thin90.a2m.gz # 1ty9A.t06-thin90.a2m with 580 sequences, total weight= 580 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15587 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1ty9A/info/1ty9A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1ty9A/nostruct-align/1ty9A.t06-thin90.a2m.gz, have 45377 columns in 185 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t61A/nostruct-align/1t61A.t06-thin90.a2m.gz # 1t61A.t06-thin90.a2m with 67 sequences, total weight= 5.43812 avg weight= 0.0811659 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t61A/info/1t61A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t61A/nostruct-align/1t61A.t06-thin90.a2m.gz, have 45600 columns in 186 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fj2A/nostruct-align/1fj2A.t06-thin90.a2m.gz # 1fj2A.t06-thin90.a2m with 13624 sequences, total weight= 13624 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.774461 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fj2A/info/1fj2A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fj2A/nostruct-align/1fj2A.t06-thin90.a2m.gz, have 45829 columns in 187 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a8d/nostruct-align/1a8d.t06-thin90.a2m.gz # 1a8d.t06-thin90.a2m with 40 sequences, total weight= 28.8297 avg weight= 0.720743 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a8d/info/1a8d.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1a8d/nostruct-align/1a8d.t06-thin90.a2m.gz, have 46281 columns in 188 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sxrA/nostruct-align/1sxrA.t06-thin90.a2m.gz # 1sxrA.t06-thin90.a2m with 505 sequences, total weight= 505 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18148 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sxrA/info/1sxrA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sxrA/nostruct-align/1sxrA.t06-thin90.a2m.gz, have 46454 columns in 189 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kgdA/nostruct-align/1kgdA.t06-thin90.a2m.gz # 1kgdA.t06-thin90.a2m with 767 sequences, total weight= 767 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21578 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kgdA/info/1kgdA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kgdA/nostruct-align/1kgdA.t06-thin90.a2m.gz, have 46629 columns in 190 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1px5A/nostruct-align/1px5A.t06-thin90.a2m.gz # 1px5A.t06-thin90.a2m with 108 sequences, total weight= 34.3602 avg weight= 0.31815 43 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1px5A/info/1px5A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1px5A/nostruct-align/1px5A.t06-thin90.a2m.gz, have 46958 columns in 191 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1npk/nostruct-align/1npk.t06-thin90.a2m.gz # 1npk.t06-thin90.a2m with 566 sequences, total weight= 60.2087 avg weight= 0.106376 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30072 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1npk/info/1npk.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1npk/nostruct-align/1npk.t06-thin90.a2m.gz, have 47108 columns in 192 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sbyA/nostruct-align/1sbyA.t06-thin90.a2m.gz # 1sbyA.t06-thin90.a2m with 12885 sequences, total weight= 12885 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13232 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sbyA/info/1sbyA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sbyA/nostruct-align/1sbyA.t06-thin90.a2m.gz, have 47362 columns in 193 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i1jA/nostruct-align/1i1jA.t06-thin90.a2m.gz # 1i1jA.t06-thin90.a2m with 26 sequences, total weight= 6.64854 avg weight= 0.255713 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i1jA/info/1i1jA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i1jA/nostruct-align/1i1jA.t06-thin90.a2m.gz, have 47468 columns in 194 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t1vA/nostruct-align/1t1vA.t06-thin90.a2m.gz # 1t1vA.t06-thin90.a2m with 820 sequences, total weight= 256.69 avg weight= 0.313036 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31309 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t1vA/info/1t1vA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t1vA/nostruct-align/1t1vA.t06-thin90.a2m.gz, have 47561 columns in 195 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j0pA/nostruct-align/1j0pA.t06-thin90.a2m.gz # 1j0pA.t06-thin90.a2m with 249 sequences, total weight= 249 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0319 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j0pA/info/1j0pA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j0pA/nostruct-align/1j0pA.t06-thin90.a2m.gz, have 47669 columns in 196 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1llfA/nostruct-align/1llfA.t06-thin90.a2m.gz # 1llfA.t06-thin90.a2m with 2340 sequences, total weight= 2340 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02535 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1llfA/info/1llfA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1llfA/nostruct-align/1llfA.t06-thin90.a2m.gz, have 48203 columns in 197 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t2wA/nostruct-align/1t2wA.t06-thin90.a2m.gz # 1t2wA.t06-thin90.a2m with 243 sequences, total weight= 243 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29319 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t2wA/info/1t2wA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t2wA/nostruct-align/1t2wA.t06-thin90.a2m.gz, have 48348 columns in 198 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yrcA/nostruct-align/1yrcA.t06-thin90.a2m.gz # 1yrcA.t06-thin90.a2m with 5644 sequences, total weight= 5644 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00122 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yrcA/info/1yrcA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1yrcA/nostruct-align/1yrcA.t06-thin90.a2m.gz, have 48753 columns in 199 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lniA/nostruct-align/1lniA.t06-thin90.a2m.gz # 1lniA.t06-thin90.a2m with 48 sequences, total weight= 12.7834 avg weight= 0.266321 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lniA/info/1lniA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lniA/nostruct-align/1lniA.t06-thin90.a2m.gz, have 48849 columns in 200 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p5dX/nostruct-align/1p5dX.t06-thin90.a2m.gz # 1p5dX.t06-thin90.a2m with 1257 sequences, total weight= 1257 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28284 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p5dX/info/1p5dX.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p5dX/nostruct-align/1p5dX.t06-thin90.a2m.gz, have 49304 columns in 201 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eu3A/nostruct-align/1eu3A.t06-thin90.a2m.gz # 1eu3A.t06-thin90.a2m with 107 sequences, total weight= 52.5247 avg weight= 0.490885 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eu3A/info/1eu3A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1eu3A/nostruct-align/1eu3A.t06-thin90.a2m.gz, have 49514 columns in 202 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kpf/nostruct-align/1kpf.t06-thin90.a2m.gz # 1kpf.t06-thin90.a2m with 845 sequences, total weight= 845 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28161 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kpf/info/1kpf.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kpf/nostruct-align/1kpf.t06-thin90.a2m.gz, have 49625 columns in 203 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m1fA/nostruct-align/1m1fA.t06-thin90.a2m.gz # 1m1fA.t06-thin90.a2m with 270 sequences, total weight= 195.909 avg weight= 0.725588 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30291 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m1fA/info/1m1fA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m1fA/nostruct-align/1m1fA.t06-thin90.a2m.gz, have 49732 columns in 204 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qhoA/nostruct-align/1qhoA.t06-thin90.a2m.gz # 1qhoA.t06-thin90.a2m with 2395 sequences, total weight= 2395 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24246 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qhoA/info/1qhoA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qhoA/nostruct-align/1qhoA.t06-thin90.a2m.gz, have 50418 columns in 205 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yacA/nostruct-align/1yacA.t06-thin90.a2m.gz # 1yacA.t06-thin90.a2m with 1030 sequences, total weight= 1030 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13459 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yacA/info/1yacA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1yacA/nostruct-align/1yacA.t06-thin90.a2m.gz, have 50622 columns in 206 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p3cA/nostruct-align/1p3cA.t06-thin90.a2m.gz # 1p3cA.t06-thin90.a2m with 3827 sequences, total weight= 3827 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16122 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p3cA/info/1p3cA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p3cA/nostruct-align/1p3cA.t06-thin90.a2m.gz, have 50837 columns in 207 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o7qA/nostruct-align/1o7qA.t06-thin90.a2m.gz # 1o7qA.t06-thin90.a2m with 69 sequences, total weight= 12.1434 avg weight= 0.175992 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o7qA/info/1o7qA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o7qA/nostruct-align/1o7qA.t06-thin90.a2m.gz, have 51124 columns in 208 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mgqA/nostruct-align/1mgqA.t06-thin90.a2m.gz # 1mgqA.t06-thin90.a2m with 456 sequences, total weight= 103.093 avg weight= 0.226082 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3036 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mgqA/info/1mgqA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mgqA/nostruct-align/1mgqA.t06-thin90.a2m.gz, have 51198 columns in 209 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w3iA/nostruct-align/1w3iA.t06-thin90.a2m.gz # 1w3iA.t06-thin90.a2m with 914 sequences, total weight= 914 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25655 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w3iA/info/1w3iA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w3iA/nostruct-align/1w3iA.t06-thin90.a2m.gz, have 51491 columns in 210 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uxzA/nostruct-align/1uxzA.t06-thin90.a2m.gz # 1uxzA.t06-thin90.a2m with 198 sequences, total weight= 144.676 avg weight= 0.730687 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30112 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uxzA/info/1uxzA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uxzA/nostruct-align/1uxzA.t06-thin90.a2m.gz, have 51622 columns in 211 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ra0A/nostruct-align/1ra0A.t06-thin90.a2m.gz # 1ra0A.t06-thin90.a2m with 3112 sequences, total weight= 3112 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.880758 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ra0A/info/1ra0A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1ra0A/nostruct-align/1ra0A.t06-thin90.a2m.gz, have 52045 columns in 212 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wm3A/nostruct-align/1wm3A.t06-thin90.a2m.gz # 1wm3A.t06-thin90.a2m with 79 sequences, total weight= 21.9291 avg weight= 0.277583 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wm3A/info/1wm3A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wm3A/nostruct-align/1wm3A.t06-thin90.a2m.gz, have 52117 columns in 213 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r12A/nostruct-align/1r12A.t06-thin90.a2m.gz # 1r12A.t06-thin90.a2m with 31 sequences, total weight= 15.4523 avg weight= 0.49846 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r12A/info/1r12A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r12A/nostruct-align/1r12A.t06-thin90.a2m.gz, have 52368 columns in 214 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1egwA/nostruct-align/1egwA.t06-thin90.a2m.gz # 1egwA.t06-thin90.a2m with 597 sequences, total weight= 15.7325 avg weight= 0.0263526 41 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1egwA/info/1egwA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1egwA/nostruct-align/1egwA.t06-thin90.a2m.gz, have 52439 columns in 215 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jmkC/nostruct-align/1jmkC.t06-thin90.a2m.gz # 1jmkC.t06-thin90.a2m with 2873 sequences, total weight= 2873 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.71897 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jmkC/info/1jmkC.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jmkC/nostruct-align/1jmkC.t06-thin90.a2m.gz, have 52661 columns in 216 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1duvG/nostruct-align/1duvG.t06-thin90.a2m.gz # 1duvG.t06-thin90.a2m with 816 sequences, total weight= 58.0108 avg weight= 0.0710917 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30102 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1duvG/info/1duvG.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1duvG/nostruct-align/1duvG.t06-thin90.a2m.gz, have 52994 columns in 217 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rocA/nostruct-align/1rocA.t06-thin90.a2m.gz # 1rocA.t06-thin90.a2m with 56 sequences, total weight= 10.661 avg weight= 0.190374 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rocA/info/1rocA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rocA/nostruct-align/1rocA.t06-thin90.a2m.gz, have 53149 columns in 218 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v70A/nostruct-align/1v70A.t06-thin90.a2m.gz # 1v70A.t06-thin90.a2m with 2453 sequences, total weight= 2453 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.929115 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v70A/info/1v70A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v70A/nostruct-align/1v70A.t06-thin90.a2m.gz, have 53254 columns in 219 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i71A/nostruct-align/1i71A.t06-thin90.a2m.gz # 1i71A.t06-thin90.a2m with 359 sequences, total weight= 26.1333 avg weight= 0.0727948 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30033 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i71A/info/1i71A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i71A/nostruct-align/1i71A.t06-thin90.a2m.gz, have 53337 columns in 220 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dqgA/nostruct-align/1dqgA.t06-thin90.a2m.gz # 1dqgA.t06-thin90.a2m with 48 sequences, total weight= 29.6443 avg weight= 0.61759 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dqgA/info/1dqgA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dqgA/nostruct-align/1dqgA.t06-thin90.a2m.gz, have 53471 columns in 221 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pq7A/nostruct-align/1pq7A.t06-thin90.a2m.gz # 1pq7A.t06-thin90.a2m with 3302 sequences, total weight= 1540.49 avg weight= 0.466531 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32295 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pq7A/info/1pq7A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pq7A/nostruct-align/1pq7A.t06-thin90.a2m.gz, have 53695 columns in 222 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l1lA/nostruct-align/1l1lA.t06-thin90.a2m.gz # 1l1lA.t06-thin90.a2m with 640 sequences, total weight= 640 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2429 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l1lA/info/1l1lA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1l1lA/nostruct-align/1l1lA.t06-thin90.a2m.gz, have 54412 columns in 223 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e2wA/nostruct-align/1e2wA.t06-thin90.a2m.gz # 1e2wA.t06-thin90.a2m with 65 sequences, total weight= 4.67728 avg weight= 0.0719582 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e2wA/info/1e2wA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e2wA/nostruct-align/1e2wA.t06-thin90.a2m.gz, have 54663 columns in 224 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lam/nostruct-align/1lam.t06-thin90.a2m.gz # 1lam.t06-thin90.a2m with 538 sequences, total weight= 63.7628 avg weight= 0.118518 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30343 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lam/info/1lam.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lam/nostruct-align/1lam.t06-thin90.a2m.gz, have 55147 columns in 225 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xx1A/nostruct-align/1xx1A.t06-thin90.a2m.gz # 1xx1A.t06-thin90.a2m with 214 sequences, total weight= 214 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.918976 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xx1A/info/1xx1A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xx1A/nostruct-align/1xx1A.t06-thin90.a2m.gz, have 55432 columns in 226 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1ltzA/nostruct-align/1ltzA.t06-thin90.a2m.gz # 1ltzA.t06-thin90.a2m with 163 sequences, total weight= 22.6206 avg weight= 0.138777 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1ltzA/info/1ltzA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1ltzA/nostruct-align/1ltzA.t06-thin90.a2m.gz, have 55706 columns in 227 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nar/nostruct-align/1nar.t06-thin90.a2m.gz # 1nar.t06-thin90.a2m with 1135 sequences, total weight= 1135 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07739 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nar/info/1nar.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nar/nostruct-align/1nar.t06-thin90.a2m.gz, have 55995 columns in 228 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xppA/nostruct-align/1xppA.t06-thin90.a2m.gz # 1xppA.t06-thin90.a2m with 5 sequences, total weight= 3.96946 avg weight= 0.793891 12 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xppA/info/1xppA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xppA/nostruct-align/1xppA.t06-thin90.a2m.gz, have 56094 columns in 229 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kyfA/nostruct-align/1kyfA.t06-thin90.a2m.gz # 1kyfA.t06-thin90.a2m with 83 sequences, total weight= 83 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01329 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kyfA/info/1kyfA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kyfA/nostruct-align/1kyfA.t06-thin90.a2m.gz, have 56341 columns in 230 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i40A/nostruct-align/1i40A.t06-thin90.a2m.gz # 1i40A.t06-thin90.a2m with 371 sequences, total weight= 37.5864 avg weight= 0.101311 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i40A/info/1i40A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i40A/nostruct-align/1i40A.t06-thin90.a2m.gz, have 56516 columns in 231 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1io0A/nostruct-align/1io0A.t06-thin90.a2m.gz # 1io0A.t06-thin90.a2m with 538 sequences, total weight= 538 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19408 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1io0A/info/1io0A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1io0A/nostruct-align/1io0A.t06-thin90.a2m.gz, have 56682 columns in 232 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/8a/8abp/nostruct-align/8abp.t06-thin90.a2m.gz # 8abp.t06-thin90.a2m with 382 sequences, total weight= 382 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.919122 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/8a/8abp/info/8abp.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/8a/8abp/nostruct-align/8abp.t06-thin90.a2m.gz, have 56987 columns in 233 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cjwA/nostruct-align/1cjwA.t06-thin90.a2m.gz # 1cjwA.t06-thin90.a2m with 8103 sequences, total weight= 8103 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.768065 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cjwA/info/1cjwA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cjwA/nostruct-align/1cjwA.t06-thin90.a2m.gz, have 57153 columns in 234 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bopA/nostruct-align/2bopA.t06-thin90.a2m.gz # 2bopA.t06-thin90.a2m with 117 sequences, total weight= 16.5313 avg weight= 0.141294 42 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bopA/info/2bopA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/2b/2bopA/nostruct-align/2bopA.t06-thin90.a2m.gz, have 57238 columns in 235 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xzzA/nostruct-align/1xzzA.t06-thin90.a2m.gz # 1xzzA.t06-thin90.a2m with 93 sequences, total weight= 93 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24296 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xzzA/info/1xzzA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xzzA/nostruct-align/1xzzA.t06-thin90.a2m.gz, have 57454 columns in 236 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qmgA/nostruct-align/1qmgA.t06-thin90.a2m.gz # 1qmgA.t06-thin90.a2m with 3693 sequences, total weight= 3693 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05921 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qmgA/info/1qmgA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qmgA/nostruct-align/1qmgA.t06-thin90.a2m.gz, have 57968 columns in 237 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jovA/nostruct-align/1jovA.t06-thin90.a2m.gz # 1jovA.t06-thin90.a2m with 579 sequences, total weight= 579 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14589 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jovA/info/1jovA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jovA/nostruct-align/1jovA.t06-thin90.a2m.gz, have 58237 columns in 238 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1ws8A/nostruct-align/1ws8A.t06-thin90.a2m.gz # 1ws8A.t06-thin90.a2m with 162 sequences, total weight= 24.4018 avg weight= 0.150628 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1ws8A/info/1ws8A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1ws8A/nostruct-align/1ws8A.t06-thin90.a2m.gz, have 58341 columns in 239 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vmgA/nostruct-align/1vmgA.t06-thin90.a2m.gz # 1vmgA.t06-thin90.a2m with 174 sequences, total weight= 45.1919 avg weight= 0.259724 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30034 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vmgA/info/1vmgA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vmgA/nostruct-align/1vmgA.t06-thin90.a2m.gz, have 58424 columns in 240 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hqkA/nostruct-align/1hqkA.t06-thin90.a2m.gz # 1hqkA.t06-thin90.a2m with 368 sequences, total weight= 26.6285 avg weight= 0.0723601 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hqkA/info/1hqkA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hqkA/nostruct-align/1hqkA.t06-thin90.a2m.gz, have 58578 columns in 241 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e85A/nostruct-align/1e85A.t06-thin90.a2m.gz # 1e85A.t06-thin90.a2m with 123 sequences, total weight= 123 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27545 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e85A/info/1e85A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e85A/nostruct-align/1e85A.t06-thin90.a2m.gz, have 58703 columns in 242 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e6bA/nostruct-align/1e6bA.t06-thin90.a2m.gz # 1e6bA.t06-thin90.a2m with 3516 sequences, total weight= 3516 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02442 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e6bA/info/1e6bA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e6bA/nostruct-align/1e6bA.t06-thin90.a2m.gz, have 58897 columns in 243 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t06-thin90.a2m.gz # 1nzyA.t06-thin90.a2m with 3042 sequences, total weight= 3042 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17745 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t06-thin90.a2m.gz, have 59166 columns in 244 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n93X/nostruct-align/1n93X.t06-thin90.a2m.gz # 1n93X.t06-thin90.a2m with 14 sequences, total weight= 6.84973 avg weight= 0.489266 15 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n93X/info/1n93X.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n93X/nostruct-align/1n93X.t06-thin90.a2m.gz, have 59501 columns in 245 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qq5A/nostruct-align/1qq5A.t06-thin90.a2m.gz # 1qq5A.t06-thin90.a2m with 4366 sequences, total weight= 4366 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.803489 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qq5A/info/1qq5A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qq5A/nostruct-align/1qq5A.t06-thin90.a2m.gz, have 59746 columns in 246 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1si6X/nostruct-align/1si6X.t06-thin90.a2m.gz # 1si6X.t06-thin90.a2m with 885 sequences, total weight= 885 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.838621 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1si6X/info/1si6X.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1si6X/nostruct-align/1si6X.t06-thin90.a2m.gz, have 60026 columns in 247 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r5rA/nostruct-align/1r5rA.t06-thin90.a2m.gz # 1r5rA.t06-thin90.a2m with 307 sequences, total weight= 307 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.93407 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r5rA/info/1r5rA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r5rA/nostruct-align/1r5rA.t06-thin90.a2m.gz, have 60143 columns in 248 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ow1A/nostruct-align/1ow1A.t06-thin90.a2m.gz # 1ow1A.t06-thin90.a2m with 33 sequences, total weight= 10.8545 avg weight= 0.328924 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ow1A/info/1ow1A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ow1A/nostruct-align/1ow1A.t06-thin90.a2m.gz, have 60310 columns in 249 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iirA/nostruct-align/1iirA.t06-thin90.a2m.gz # 1iirA.t06-thin90.a2m with 4632 sequences, total weight= 4632 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.81482 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iirA/info/1iirA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iirA/nostruct-align/1iirA.t06-thin90.a2m.gz, have 60692 columns in 250 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vggA/nostruct-align/1vggA.t06-thin90.a2m.gz # 1vggA.t06-thin90.a2m with 36 sequences, total weight= 4.51079 avg weight= 0.1253 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vggA/info/1vggA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vggA/nostruct-align/1vggA.t06-thin90.a2m.gz, have 60853 columns in 251 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oc7A/nostruct-align/1oc7A.t06-thin90.a2m.gz # 1oc7A.t06-thin90.a2m with 90 sequences, total weight= 23.4602 avg weight= 0.260669 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oc7A/info/1oc7A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oc7A/nostruct-align/1oc7A.t06-thin90.a2m.gz, have 61217 columns in 252 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wkrA/nostruct-align/1wkrA.t06-thin90.a2m.gz # 1wkrA.t06-thin90.a2m with 1115 sequences, total weight= 1115 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15558 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wkrA/info/1wkrA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wkrA/nostruct-align/1wkrA.t06-thin90.a2m.gz, have 61557 columns in 253 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v4vA/nostruct-align/1v4vA.t06-thin90.a2m.gz # 1v4vA.t06-thin90.a2m with 8152 sequences, total weight= 8152 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.724862 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v4vA/info/1v4vA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v4vA/nostruct-align/1v4vA.t06-thin90.a2m.gz, have 61930 columns in 254 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wy2A/nostruct-align/1wy2A.t06-thin90.a2m.gz # 1wy2A.t06-thin90.a2m with 1828 sequences, total weight= 1828 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11753 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wy2A/info/1wy2A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wy2A/nostruct-align/1wy2A.t06-thin90.a2m.gz, have 62281 columns in 255 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tt8A/nostruct-align/1tt8A.t06-thin90.a2m.gz # 1tt8A.t06-thin90.a2m with 146 sequences, total weight= 146 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19019 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tt8A/info/1tt8A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tt8A/nostruct-align/1tt8A.t06-thin90.a2m.gz, have 62445 columns in 256 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qsgA/nostruct-align/1qsgA.t06-thin90.a2m.gz # 1qsgA.t06-thin90.a2m with 11771 sequences, total weight= 11771 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18162 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qsgA/info/1qsgA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qsgA/nostruct-align/1qsgA.t06-thin90.a2m.gz, have 62703 columns in 257 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1aquA/nostruct-align/1aquA.t06-thin90.a2m.gz # 1aquA.t06-thin90.a2m with 1097 sequences, total weight= 1097 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.899158 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1aquA/info/1aquA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1aquA/nostruct-align/1aquA.t06-thin90.a2m.gz, have 62984 columns in 258 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1llnA/nostruct-align/1llnA.t06-thin90.a2m.gz # 1llnA.t06-thin90.a2m with 149 sequences, total weight= 149 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17979 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1llnA/info/1llnA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1llnA/nostruct-align/1llnA.t06-thin90.a2m.gz, have 63246 columns in 259 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hdoA/nostruct-align/1hdoA.t06-thin90.a2m.gz # 1hdoA.t06-thin90.a2m with 16519 sequences, total weight= 16519 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.975963 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hdoA/info/1hdoA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hdoA/nostruct-align/1hdoA.t06-thin90.a2m.gz, have 63451 columns in 260 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c1dA/nostruct-align/1c1dA.t06-thin90.a2m.gz # 1c1dA.t06-thin90.a2m with 1157 sequences, total weight= 1157 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2135 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c1dA/info/1c1dA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1c1dA/nostruct-align/1c1dA.t06-thin90.a2m.gz, have 63800 columns in 261 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vk5A/nostruct-align/1vk5A.t06-thin90.a2m.gz # 1vk5A.t06-thin90.a2m with 5 sequences, total weight= 2.48423 avg weight= 0.496845 9 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vk5A/info/1vk5A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vk5A/nostruct-align/1vk5A.t06-thin90.a2m.gz, have 63921 columns in 262 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ie9A/nostruct-align/1ie9A.t06-thin90.a2m.gz # 1ie9A.t06-thin90.a2m with 1239 sequences, total weight= 1239 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.934228 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ie9A/info/1ie9A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ie9A/nostruct-align/1ie9A.t06-thin90.a2m.gz, have 64176 columns in 263 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1ay7B/nostruct-align/1ay7B.t06-thin90.a2m.gz # 1ay7B.t06-thin90.a2m with 56 sequences, total weight= 54.7676 avg weight= 0.977993 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1ay7B/info/1ay7B.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1ay7B/nostruct-align/1ay7B.t06-thin90.a2m.gz, have 64265 columns in 264 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cruA/nostruct-align/1cruA.t06-thin90.a2m.gz # 1cruA.t06-thin90.a2m with 1786 sequences, total weight= 1786 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.960438 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cruA/info/1cruA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cruA/nostruct-align/1cruA.t06-thin90.a2m.gz, have 64713 columns in 265 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1moq/nostruct-align/1moq.t06-thin90.a2m.gz # 1moq.t06-thin90.a2m with 1323 sequences, total weight= 1323 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15897 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1moq/info/1moq.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1moq/nostruct-align/1moq.t06-thin90.a2m.gz, have 65079 columns in 266 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iomA/nostruct-align/1iomA.t06-thin90.a2m.gz # 1iomA.t06-thin90.a2m with 620 sequences, total weight= 95.4854 avg weight= 0.154009 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30348 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iomA/info/1iomA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iomA/nostruct-align/1iomA.t06-thin90.a2m.gz, have 65453 columns in 267 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q92A/nostruct-align/1q92A.t06-thin90.a2m.gz # 1q92A.t06-thin90.a2m with 3430 sequences, total weight= 3430 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.880224 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q92A/info/1q92A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q92A/nostruct-align/1q92A.t06-thin90.a2m.gz, have 65648 columns in 268 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xm3A/nostruct-align/1xm3A.t06-thin90.a2m.gz # 1xm3A.t06-thin90.a2m with 534 sequences, total weight= 534 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28984 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xm3A/info/1xm3A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xm3A/nostruct-align/1xm3A.t06-thin90.a2m.gz, have 65892 columns in 269 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1ja9A/nostruct-align/1ja9A.t06-thin90.a2m.gz # 1ja9A.t06-thin90.a2m with 12275 sequences, total weight= 12275 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18462 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1ja9A/info/1ja9A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1ja9A/nostruct-align/1ja9A.t06-thin90.a2m.gz, have 66151 columns in 270 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x9dA/nostruct-align/1x9dA.t06-thin90.a2m.gz # 1x9dA.t06-thin90.a2m with 236 sequences, total weight= 35.2909 avg weight= 0.149538 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x9dA/info/1x9dA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1x9dA/nostruct-align/1x9dA.t06-thin90.a2m.gz, have 66602 columns in 271 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v2bA/nostruct-align/1v2bA.t06-thin90.a2m.gz # 1v2bA.t06-thin90.a2m with 70 sequences, total weight= 39.3801 avg weight= 0.562573 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v2bA/info/1v2bA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v2bA/nostruct-align/1v2bA.t06-thin90.a2m.gz, have 66750 columns in 272 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gp6A/nostruct-align/1gp6A.t06-thin90.a2m.gz # 1gp6A.t06-thin90.a2m with 997 sequences, total weight= 997 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21057 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gp6A/info/1gp6A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gp6A/nostruct-align/1gp6A.t06-thin90.a2m.gz, have 67099 columns in 273 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gtvA/nostruct-align/1gtvA.t06-thin90.a2m.gz # 1gtvA.t06-thin90.a2m with 3665 sequences, total weight= 3665 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.858071 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gtvA/info/1gtvA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gtvA/nostruct-align/1gtvA.t06-thin90.a2m.gz, have 67307 columns in 274 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bqcA/nostruct-align/1bqcA.t06-thin90.a2m.gz # 1bqcA.t06-thin90.a2m with 2864 sequences, total weight= 2864 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.805999 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bqcA/info/1bqcA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bqcA/nostruct-align/1bqcA.t06-thin90.a2m.gz, have 67609 columns in 275 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nwzA/nostruct-align/1nwzA.t06-thin90.a2m.gz # 1nwzA.t06-thin90.a2m with 13 sequences, total weight= 6.09517 avg weight= 0.468859 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nwzA/info/1nwzA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nwzA/nostruct-align/1nwzA.t06-thin90.a2m.gz, have 67734 columns in 276 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wmqA/nostruct-align/1wmqA.t06-thin90.a2m.gz # 1wmqA.t06-thin90.a2m with 21 sequences, total weight= 9.24472 avg weight= 0.440225 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wmqA/info/1wmqA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wmqA/nostruct-align/1wmqA.t06-thin90.a2m.gz, have 67877 columns in 277 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pinA/nostruct-align/1pinA.t06-thin90.a2m.gz # 1pinA.t06-thin90.a2m with 892 sequences, total weight= 892 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19262 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pinA/info/1pinA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pinA/nostruct-align/1pinA.t06-thin90.a2m.gz, have 68030 columns in 278 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jlvA/nostruct-align/1jlvA.t06-thin90.a2m.gz # 1jlvA.t06-thin90.a2m with 3506 sequences, total weight= 3506 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.996553 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jlvA/info/1jlvA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jlvA/nostruct-align/1jlvA.t06-thin90.a2m.gz, have 68237 columns in 279 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kcqA/nostruct-align/1kcqA.t06-thin90.a2m.gz # 1kcqA.t06-thin90.a2m with 752 sequences, total weight= 752 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09329 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kcqA/info/1kcqA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kcqA/nostruct-align/1kcqA.t06-thin90.a2m.gz, have 68340 columns in 280 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qh5A/nostruct-align/1qh5A.t06-thin90.a2m.gz # 1qh5A.t06-thin90.a2m with 4396 sequences, total weight= 4396 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.880279 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qh5A/info/1qh5A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qh5A/nostruct-align/1qh5A.t06-thin90.a2m.gz, have 68600 columns in 281 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v0wA/nostruct-align/1v0wA.t06-thin90.a2m.gz # 1v0wA.t06-thin90.a2m with 1237 sequences, total weight= 1237 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.862612 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v0wA/info/1v0wA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v0wA/nostruct-align/1v0wA.t06-thin90.a2m.gz, have 69096 columns in 282 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2ilk/nostruct-align/2ilk.t06-thin90.a2m.gz # 2ilk.t06-thin90.a2m with 89 sequences, total weight= 44.9199 avg weight= 0.504718 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2ilk/info/2ilk.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/2i/2ilk/nostruct-align/2ilk.t06-thin90.a2m.gz, have 69251 columns in 283 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h2eA/nostruct-align/1h2eA.t06-thin90.a2m.gz # 1h2eA.t06-thin90.a2m with 1832 sequences, total weight= 1832 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05817 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h2eA/info/1h2eA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h2eA/nostruct-align/1h2eA.t06-thin90.a2m.gz, have 69458 columns in 284 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r5yA/nostruct-align/1r5yA.t06-thin90.a2m.gz # 1r5yA.t06-thin90.a2m with 435 sequences, total weight= 89.4866 avg weight= 0.205716 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30152 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r5yA/info/1r5yA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r5yA/nostruct-align/1r5yA.t06-thin90.a2m.gz, have 69819 columns in 285 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n13B/nostruct-align/1n13B.t06-thin90.a2m.gz # 1n13B.t06-thin90.a2m with 35 sequences, total weight= 19.7411 avg weight= 0.56403 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n13B/info/1n13B.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n13B/nostruct-align/1n13B.t06-thin90.a2m.gz, have 69931 columns in 286 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qusA/nostruct-align/1qusA.t06-thin90.a2m.gz # 1qusA.t06-thin90.a2m with 366 sequences, total weight= 137.678 avg weight= 0.37617 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30326 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qusA/info/1qusA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qusA/nostruct-align/1qusA.t06-thin90.a2m.gz, have 70243 columns in 287 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mc2A/nostruct-align/1mc2A.t06-thin90.a2m.gz # 1mc2A.t06-thin90.a2m with 330 sequences, total weight= 28.6557 avg weight= 0.0868356 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mc2A/info/1mc2A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mc2A/nostruct-align/1mc2A.t06-thin90.a2m.gz, have 70365 columns in 288 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vsrA/nostruct-align/1vsrA.t06-thin90.a2m.gz # 1vsrA.t06-thin90.a2m with 80 sequences, total weight= 16.8717 avg weight= 0.210896 42 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vsrA/info/1vsrA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vsrA/nostruct-align/1vsrA.t06-thin90.a2m.gz, have 70499 columns in 289 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ooeA/nostruct-align/1ooeA.t06-thin90.a2m.gz # 1ooeA.t06-thin90.a2m with 11929 sequences, total weight= 11929 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16288 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ooeA/info/1ooeA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ooeA/nostruct-align/1ooeA.t06-thin90.a2m.gz, have 70734 columns in 290 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1flmA/nostruct-align/1flmA.t06-thin90.a2m.gz # 1flmA.t06-thin90.a2m with 97 sequences, total weight= 97 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20358 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1flmA/info/1flmA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1flmA/nostruct-align/1flmA.t06-thin90.a2m.gz, have 70856 columns in 291 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xg5A/nostruct-align/1xg5A.t06-thin90.a2m.gz # 1xg5A.t06-thin90.a2m with 13170 sequences, total weight= 13170 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12643 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xg5A/info/1xg5A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xg5A/nostruct-align/1xg5A.t06-thin90.a2m.gz, have 71110 columns in 292 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gci/nostruct-align/1gci.t06-thin90.a2m.gz # 1gci.t06-thin90.a2m with 1712 sequences, total weight= 1712 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22302 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gci/info/1gci.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gci/nostruct-align/1gci.t06-thin90.a2m.gz, have 71379 columns in 293 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vm0A/nostruct-align/1vm0A.t06-thin90.a2m.gz # 1vm0A.t06-thin90.a2m with 38 sequences, total weight= 15.7823 avg weight= 0.415324 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vm0A/info/1vm0A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vm0A/nostruct-align/1vm0A.t06-thin90.a2m.gz, have 71472 columns in 294 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1usgA/nostruct-align/1usgA.t06-thin90.a2m.gz # 1usgA.t06-thin90.a2m with 2421 sequences, total weight= 2421 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.861132 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1usgA/info/1usgA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1usgA/nostruct-align/1usgA.t06-thin90.a2m.gz, have 71817 columns in 295 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1unqA/nostruct-align/1unqA.t06-thin90.a2m.gz # 1unqA.t06-thin90.a2m with 1897 sequences, total weight= 1897 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.910851 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1unqA/info/1unqA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1unqA/nostruct-align/1unqA.t06-thin90.a2m.gz, have 71934 columns in 296 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m1nA/nostruct-align/1m1nA.t06-thin90.a2m.gz # 1m1nA.t06-thin90.a2m with 687 sequences, total weight= 687 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22038 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m1nA/info/1m1nA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m1nA/nostruct-align/1m1nA.t06-thin90.a2m.gz, have 72411 columns in 297 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1se8A/nostruct-align/1se8A.t06-thin90.a2m.gz # 1se8A.t06-thin90.a2m with 431 sequences, total weight= 100.119 avg weight= 0.232295 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1se8A/info/1se8A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1se8A/nostruct-align/1se8A.t06-thin90.a2m.gz, have 72624 columns in 298 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pot/nostruct-align/1pot.t06-thin90.a2m.gz # 1pot.t06-thin90.a2m with 2760 sequences, total weight= 2760 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.869508 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pot/info/1pot.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pot/nostruct-align/1pot.t06-thin90.a2m.gz, have 72946 columns in 299 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w6sB/nostruct-align/1w6sB.t06-thin90.a2m.gz # 1w6sB.t06-thin90.a2m with 12 sequences, total weight= 3.2008 avg weight= 0.266733 15 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w6sB/info/1w6sB.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w6sB/nostruct-align/1w6sB.t06-thin90.a2m.gz, have 73018 columns in 300 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wlgA/nostruct-align/1wlgA.t06-thin90.a2m.gz # 1wlgA.t06-thin90.a2m with 534 sequences, total weight= 161.999 avg weight= 0.303368 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30659 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wlgA/info/1wlgA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wlgA/nostruct-align/1wlgA.t06-thin90.a2m.gz, have 73311 columns in 301 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r6jA/nostruct-align/1r6jA.t06-thin90.a2m.gz # 1r6jA.t06-thin90.a2m with 817 sequences, total weight= 144.317 avg weight= 0.176643 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.319 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r6jA/info/1r6jA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r6jA/nostruct-align/1r6jA.t06-thin90.a2m.gz, have 73393 columns in 302 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iqcA/nostruct-align/1iqcA.t06-thin90.a2m.gz # 1iqcA.t06-thin90.a2m with 532 sequences, total weight= 532 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08583 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iqcA/info/1iqcA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iqcA/nostruct-align/1iqcA.t06-thin90.a2m.gz, have 73701 columns in 303 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p9aG/nostruct-align/1p9aG.t06-thin90.a2m.gz # 1p9aG.t06-thin90.a2m with 9330 sequences, total weight= 9330 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.966774 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p9aG/info/1p9aG.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p9aG/nostruct-align/1p9aG.t06-thin90.a2m.gz, have 73967 columns in 304 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1z57A/nostruct-align/1z57A.t06-thin90.a2m.gz # 1z57A.t06-thin90.a2m with 12796 sequences, total weight= 12796 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03097 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1z57A/info/1z57A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1z/1z57A/nostruct-align/1z57A.t06-thin90.a2m.gz, have 74300 columns in 305 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yg9A/nostruct-align/1yg9A.t06-thin90.a2m.gz # 1yg9A.t06-thin90.a2m with 1149 sequences, total weight= 1149 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16293 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yg9A/info/1yg9A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1yg9A/nostruct-align/1yg9A.t06-thin90.a2m.gz, have 74630 columns in 306 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oewA/nostruct-align/1oewA.t06-thin90.a2m.gz # 1oewA.t06-thin90.a2m with 1107 sequences, total weight= 1107 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18503 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oewA/info/1oewA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oewA/nostruct-align/1oewA.t06-thin90.a2m.gz, have 74958 columns in 307 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hz4A/nostruct-align/1hz4A.t06-thin90.a2m.gz # 1hz4A.t06-thin90.a2m with 21 sequences, total weight= 10.2762 avg weight= 0.489341 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hz4A/info/1hz4A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hz4A/nostruct-align/1hz4A.t06-thin90.a2m.gz, have 75324 columns in 308 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wer/nostruct-align/1wer.t06-thin90.a2m.gz # 1wer.t06-thin90.a2m with 285 sequences, total weight= 285 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03754 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wer/info/1wer.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wer/nostruct-align/1wer.t06-thin90.a2m.gz, have 75648 columns in 309 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1ne9A/nostruct-align/1ne9A.t06-thin90.a2m.gz # 1ne9A.t06-thin90.a2m with 591 sequences, total weight= 591 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.877007 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1ne9A/info/1ne9A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1ne9A/nostruct-align/1ne9A.t06-thin90.a2m.gz, have 75983 columns in 310 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qe3A/nostruct-align/1qe3A.t06-thin90.a2m.gz # 1qe3A.t06-thin90.a2m with 2399 sequences, total weight= 2399 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05871 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qe3A/info/1qe3A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qe3A/nostruct-align/1qe3A.t06-thin90.a2m.gz, have 76450 columns in 311 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qnaA/nostruct-align/1qnaA.t06-thin90.a2m.gz # 1qnaA.t06-thin90.a2m with 136 sequences, total weight= 29.6051 avg weight= 0.217685 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qnaA/info/1qnaA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qnaA/nostruct-align/1qnaA.t06-thin90.a2m.gz, have 76632 columns in 312 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wouA/nostruct-align/1wouA.t06-thin90.a2m.gz # 1wouA.t06-thin90.a2m with 3028 sequences, total weight= 3028 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11675 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wouA/info/1wouA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wouA/nostruct-align/1wouA.t06-thin90.a2m.gz, have 76751 columns in 313 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rp0A/nostruct-align/1rp0A.t06-thin90.a2m.gz # 1rp0A.t06-thin90.a2m with 10754 sequences, total weight= 10754 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.841987 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rp0A/info/1rp0A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rp0A/nostruct-align/1rp0A.t06-thin90.a2m.gz, have 77029 columns in 314 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3p/3proC/nostruct-align/3proC.t06-thin90.a2m.gz # 3proC.t06-thin90.a2m with 25 sequences, total weight= 16.7636 avg weight= 0.670543 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3p/3proC/info/3proC.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/3p/3proC/nostruct-align/3proC.t06-thin90.a2m.gz, have 77179 columns in 315 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ukfA/nostruct-align/1ukfA.t06-thin90.a2m.gz # 1ukfA.t06-thin90.a2m with 27 sequences, total weight= 27 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05769 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ukfA/info/1ukfA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ukfA/nostruct-align/1ukfA.t06-thin90.a2m.gz, have 77367 columns in 316 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v7rA/nostruct-align/1v7rA.t06-thin90.a2m.gz # 1v7rA.t06-thin90.a2m with 427 sequences, total weight= 32.8606 avg weight= 0.0769569 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v7rA/info/1v7rA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v7rA/nostruct-align/1v7rA.t06-thin90.a2m.gz, have 77553 columns in 317 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nz0A/nostruct-align/1nz0A.t06-thin90.a2m.gz # 1nz0A.t06-thin90.a2m with 324 sequences, total weight= 208.937 avg weight= 0.644868 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30492 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nz0A/info/1nz0A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nz0A/nostruct-align/1nz0A.t06-thin90.a2m.gz, have 77662 columns in 318 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p4oA/nostruct-align/1p4oA.t06-thin90.a2m.gz # 1p4oA.t06-thin90.a2m with 13325 sequences, total weight= 13325 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04274 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p4oA/info/1p4oA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p4oA/nostruct-align/1p4oA.t06-thin90.a2m.gz, have 77970 columns in 319 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1ajsA/nostruct-align/1ajsA.t06-thin90.a2m.gz # 1ajsA.t06-thin90.a2m with 6925 sequences, total weight= 6925 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.909958 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1ajsA/info/1ajsA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1ajsA/nostruct-align/1ajsA.t06-thin90.a2m.gz, have 78382 columns in 320 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c3cA/nostruct-align/1c3cA.t06-thin90.a2m.gz # 1c3cA.t06-thin90.a2m with 1310 sequences, total weight= 647.489 avg weight= 0.494266 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31615 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c3cA/info/1c3cA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1c3cA/nostruct-align/1c3cA.t06-thin90.a2m.gz, have 78806 columns in 321 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mzbA/nostruct-align/1mzbA.t06-thin90.a2m.gz # 1mzbA.t06-thin90.a2m with 719 sequences, total weight= 719 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28275 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mzbA/info/1mzbA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mzbA/nostruct-align/1mzbA.t06-thin90.a2m.gz, have 78939 columns in 322 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wvgA/nostruct-align/1wvgA.t06-thin90.a2m.gz # 1wvgA.t06-thin90.a2m with 14760 sequences, total weight= 14760 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.880178 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wvgA/info/1wvgA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wvgA/nostruct-align/1wvgA.t06-thin90.a2m.gz, have 79291 columns in 323 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xq6A/nostruct-align/1xq6A.t06-thin90.a2m.gz # 1xq6A.t06-thin90.a2m with 16778 sequences, total weight= 16778 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.925834 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xq6A/info/1xq6A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xq6A/nostruct-align/1xq6A.t06-thin90.a2m.gz, have 79544 columns in 324 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b6a/nostruct-align/1b6a.t06-thin90.a2m.gz # 1b6a.t06-thin90.a2m with 1625 sequences, total weight= 167.149 avg weight= 0.102861 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30498 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b6a/info/1b6a.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1b6a/nostruct-align/1b6a.t06-thin90.a2m.gz, have 79899 columns in 325 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x8gA/nostruct-align/1x8gA.t06-thin90.a2m.gz # 1x8gA.t06-thin90.a2m with 4483 sequences, total weight= 4483 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.838648 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x8gA/info/1x8gA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1x8gA/nostruct-align/1x8gA.t06-thin90.a2m.gz, have 80123 columns in 326 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c1kA/nostruct-align/1c1kA.t06-thin90.a2m.gz # 1c1kA.t06-thin90.a2m with 13 sequences, total weight= 7.00569 avg weight= 0.538899 19 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c1kA/info/1c1kA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1c1kA/nostruct-align/1c1kA.t06-thin90.a2m.gz, have 80340 columns in 327 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3v/3vub/nostruct-align/3vub.t06-thin90.a2m.gz # 3vub.t06-thin90.a2m with 30 sequences, total weight= 13.4549 avg weight= 0.448496 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3v/3vub/info/3vub.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/3v/3vub/nostruct-align/3vub.t06-thin90.a2m.gz, have 80441 columns in 328 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2baa/nostruct-align/2baa.t06-thin90.a2m.gz # 2baa.t06-thin90.a2m with 339 sequences, total weight= 110.526 avg weight= 0.326036 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30081 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2baa/info/2baa.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/2b/2baa/nostruct-align/2baa.t06-thin90.a2m.gz, have 80684 columns in 329 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xsqA/nostruct-align/1xsqA.t06-thin90.a2m.gz # 1xsqA.t06-thin90.a2m with 103 sequences, total weight= 38.0251 avg weight= 0.369176 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xsqA/info/1xsqA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xsqA/nostruct-align/1xsqA.t06-thin90.a2m.gz, have 80838 columns in 330 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oruA/nostruct-align/1oruA.t06-thin90.a2m.gz # 1oruA.t06-thin90.a2m with 282 sequences, total weight= 282 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22529 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oruA/info/1oruA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oruA/nostruct-align/1oruA.t06-thin90.a2m.gz, have 81020 columns in 331 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cqxA/nostruct-align/1cqxA.t06-thin90.a2m.gz # 1cqxA.t06-thin90.a2m with 2483 sequences, total weight= 2483 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00234 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cqxA/info/1cqxA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cqxA/nostruct-align/1cqxA.t06-thin90.a2m.gz, have 81423 columns in 332 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1txlA/nostruct-align/1txlA.t06-thin90.a2m.gz # 1txlA.t06-thin90.a2m with 37 sequences, total weight= 10.3108 avg weight= 0.27867 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1txlA/info/1txlA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1txlA/nostruct-align/1txlA.t06-thin90.a2m.gz, have 81611 columns in 333 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ud9A/nostruct-align/1ud9A.t06-thin90.a2m.gz # 1ud9A.t06-thin90.a2m with 231 sequences, total weight= 231 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13346 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ud9A/info/1ud9A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ud9A/nostruct-align/1ud9A.t06-thin90.a2m.gz, have 81853 columns in 334 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t82A/nostruct-align/1t82A.t06-thin90.a2m.gz # 1t82A.t06-thin90.a2m with 1073 sequences, total weight= 1073 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.048 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t82A/info/1t82A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t82A/nostruct-align/1t82A.t06-thin90.a2m.gz, have 81996 columns in 335 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m1qA/nostruct-align/1m1qA.t06-thin90.a2m.gz # 1m1qA.t06-thin90.a2m with 165 sequences, total weight= 165 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1586 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m1qA/info/1m1qA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m1qA/nostruct-align/1m1qA.t06-thin90.a2m.gz, have 82086 columns in 336 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nnxA/nostruct-align/1nnxA.t06-thin90.a2m.gz # 1nnxA.t06-thin90.a2m with 58 sequences, total weight= 17.7408 avg weight= 0.305876 37 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nnxA/info/1nnxA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nnxA/nostruct-align/1nnxA.t06-thin90.a2m.gz, have 82179 columns in 337 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fm0D/nostruct-align/1fm0D.t06-thin90.a2m.gz # 1fm0D.t06-thin90.a2m with 341 sequences, total weight= 60.9201 avg weight= 0.178651 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30279 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fm0D/info/1fm0D.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fm0D/nostruct-align/1fm0D.t06-thin90.a2m.gz, have 82260 columns in 338 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v7wA/nostruct-align/1v7wA.t06-thin90.a2m.gz # 1v7wA.t06-thin90.a2m with 1350 sequences, total weight= 1350 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.79412 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v7wA/info/1v7wA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v7wA/nostruct-align/1v7wA.t06-thin90.a2m.gz, have 83039 columns in 339 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hd2A/nostruct-align/1hd2A.t06-thin90.a2m.gz # 1hd2A.t06-thin90.a2m with 2166 sequences, total weight= 2166 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20725 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hd2A/info/1hd2A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hd2A/nostruct-align/1hd2A.t06-thin90.a2m.gz, have 83200 columns in 340 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pa1A/nostruct-align/1pa1A.t06-thin90.a2m.gz # 1pa1A.t06-thin90.a2m with 1120 sequences, total weight= 1120 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23399 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pa1A/info/1pa1A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pa1A/nostruct-align/1pa1A.t06-thin90.a2m.gz, have 83502 columns in 341 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1euwA/nostruct-align/1euwA.t06-thin90.a2m.gz # 1euwA.t06-thin90.a2m with 702 sequences, total weight= 702 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29099 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1euwA/info/1euwA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1euwA/nostruct-align/1euwA.t06-thin90.a2m.gz, have 83638 columns in 342 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1ah7/nostruct-align/1ah7.t06-thin90.a2m.gz # 1ah7.t06-thin90.a2m with 150 sequences, total weight= 150 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04957 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1ah7/info/1ah7.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1ah7/nostruct-align/1ah7.t06-thin90.a2m.gz, have 83883 columns in 343 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f6bA/nostruct-align/1f6bA.t06-thin90.a2m.gz # 1f6bA.t06-thin90.a2m with 7037 sequences, total weight= 7037 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02557 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f6bA/info/1f6bA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f6bA/nostruct-align/1f6bA.t06-thin90.a2m.gz, have 84059 columns in 344 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vqsA/nostruct-align/1vqsA.t06-thin90.a2m.gz # 1vqsA.t06-thin90.a2m with 181 sequences, total weight= 181 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17787 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vqsA/info/1vqsA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vqsA/nostruct-align/1vqsA.t06-thin90.a2m.gz, have 84169 columns in 345 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qksA/nostruct-align/1qksA.t06-thin90.a2m.gz # 1qksA.t06-thin90.a2m with 449 sequences, total weight= 341.445 avg weight= 0.760457 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3007 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qksA/info/1qksA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qksA/nostruct-align/1qksA.t06-thin90.a2m.gz, have 84728 columns in 346 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h6fA/nostruct-align/1h6fA.t06-thin90.a2m.gz # 1h6fA.t06-thin90.a2m with 250 sequences, total weight= 35.209 avg weight= 0.140836 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h6fA/info/1h6fA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h6fA/nostruct-align/1h6fA.t06-thin90.a2m.gz, have 84912 columns in 347 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q7lA/nostruct-align/1q7lA.t06-thin90.a2m.gz # 1q7lA.t06-thin90.a2m with 2033 sequences, total weight= 2033 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10642 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q7lA/info/1q7lA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q7lA/nostruct-align/1q7lA.t06-thin90.a2m.gz, have 85104 columns in 348 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1te2A/nostruct-align/1te2A.t06-thin90.a2m.gz # 1te2A.t06-thin90.a2m with 4398 sequences, total weight= 4398 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.882451 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1te2A/info/1te2A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1te2A/nostruct-align/1te2A.t06-thin90.a2m.gz, have 85322 columns in 349 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q0pA/nostruct-align/1q0pA.t06-thin90.a2m.gz # 1q0pA.t06-thin90.a2m with 2083 sequences, total weight= 2083 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.957817 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q0pA/info/1q0pA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q0pA/nostruct-align/1q0pA.t06-thin90.a2m.gz, have 85514 columns in 350 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xe0A/nostruct-align/1xe0A.t06-thin90.a2m.gz # 1xe0A.t06-thin90.a2m with 55 sequences, total weight= 12.5546 avg weight= 0.228265 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xe0A/info/1xe0A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xe0A/nostruct-align/1xe0A.t06-thin90.a2m.gz, have 85622 columns in 351 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vziA/nostruct-align/1vziA.t06-thin90.a2m.gz # 1vziA.t06-thin90.a2m with 55 sequences, total weight= 18.4018 avg weight= 0.334579 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vziA/info/1vziA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vziA/nostruct-align/1vziA.t06-thin90.a2m.gz, have 85747 columns in 352 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vybA/nostruct-align/1vybA.t06-thin90.a2m.gz # 1vybA.t06-thin90.a2m with 2319 sequences, total weight= 2319 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.845286 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vybA/info/1vybA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vybA/nostruct-align/1vybA.t06-thin90.a2m.gz, have 85983 columns in 353 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uptB/nostruct-align/1uptB.t06-thin90.a2m.gz # 1uptB.t06-thin90.a2m with 13 sequences, total weight= 6.11458 avg weight= 0.470353 19 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uptB/info/1uptB.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uptB/nostruct-align/1uptB.t06-thin90.a2m.gz, have 86041 columns in 354 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o4vA/nostruct-align/1o4vA.t06-thin90.a2m.gz # 1o4vA.t06-thin90.a2m with 415 sequences, total weight= 21.1851 avg weight= 0.0510484 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o4vA/info/1o4vA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o4vA/nostruct-align/1o4vA.t06-thin90.a2m.gz, have 86210 columns in 355 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gq8A/nostruct-align/1gq8A.t06-thin90.a2m.gz # 1gq8A.t06-thin90.a2m with 413 sequences, total weight= 413 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27504 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gq8A/info/1gq8A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gq8A/nostruct-align/1gq8A.t06-thin90.a2m.gz, have 86529 columns in 356 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pz4A/nostruct-align/1pz4A.t06-thin90.a2m.gz # 1pz4A.t06-thin90.a2m with 184 sequences, total weight= 97.1848 avg weight= 0.528178 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30146 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pz4A/info/1pz4A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pz4A/nostruct-align/1pz4A.t06-thin90.a2m.gz, have 86642 columns in 357 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bjiA/nostruct-align/2bjiA.t06-thin90.a2m.gz # 2bjiA.t06-thin90.a2m with 1302 sequences, total weight= 1302 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13829 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bjiA/info/2bjiA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/2b/2bjiA/nostruct-align/2bjiA.t06-thin90.a2m.gz, have 86916 columns in 358 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qmvA/nostruct-align/1qmvA.t06-thin90.a2m.gz # 1qmvA.t06-thin90.a2m with 2815 sequences, total weight= 2815 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12535 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qmvA/info/1qmvA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qmvA/nostruct-align/1qmvA.t06-thin90.a2m.gz, have 87113 columns in 359 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qgiA/nostruct-align/1qgiA.t06-thin90.a2m.gz # 1qgiA.t06-thin90.a2m with 22 sequences, total weight= 16.6454 avg weight= 0.756608 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qgiA/info/1qgiA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qgiA/nostruct-align/1qgiA.t06-thin90.a2m.gz, have 87372 columns in 360 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sfsA/nostruct-align/1sfsA.t06-thin90.a2m.gz # 1sfsA.t06-thin90.a2m with 18 sequences, total weight= 18 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10838 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sfsA/info/1sfsA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sfsA/nostruct-align/1sfsA.t06-thin90.a2m.gz, have 87585 columns in 361 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ru4A/nostruct-align/1ru4A.t06-thin90.a2m.gz # 1ru4A.t06-thin90.a2m with 1708 sequences, total weight= 1708 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.853792 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ru4A/info/1ru4A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1ru4A/nostruct-align/1ru4A.t06-thin90.a2m.gz, have 87985 columns in 362 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m33A/nostruct-align/1m33A.t06-thin90.a2m.gz # 1m33A.t06-thin90.a2m with 9775 sequences, total weight= 9775 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.705881 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m33A/info/1m33A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m33A/nostruct-align/1m33A.t06-thin90.a2m.gz, have 88240 columns in 363 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t4hA/nostruct-align/1t4hA.t06-thin90.a2m.gz # 1t4hA.t06-thin90.a2m with 13082 sequences, total weight= 13082 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18746 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t4hA/info/1t4hA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t4hA/nostruct-align/1t4hA.t06-thin90.a2m.gz, have 88510 columns in 364 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1igqA/nostruct-align/1igqA.t06-thin90.a2m.gz # 1igqA.t06-thin90.a2m with 6 sequences, total weight= 2.45317 avg weight= 0.408862 10 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1igqA/info/1igqA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1igqA/nostruct-align/1igqA.t06-thin90.a2m.gz, have 88564 columns in 365 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mkkA/nostruct-align/1mkkA.t06-thin90.a2m.gz # 1mkkA.t06-thin90.a2m with 99 sequences, total weight= 27.2177 avg weight= 0.274926 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mkkA/info/1mkkA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mkkA/nostruct-align/1mkkA.t06-thin90.a2m.gz, have 88657 columns in 366 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pyfA/nostruct-align/1pyfA.t06-thin90.a2m.gz # 1pyfA.t06-thin90.a2m with 2615 sequences, total weight= 2615 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29218 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pyfA/info/1pyfA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pyfA/nostruct-align/1pyfA.t06-thin90.a2m.gz, have 88968 columns in 367 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rxqA/nostruct-align/1rxqA.t06-thin90.a2m.gz # 1rxqA.t06-thin90.a2m with 397 sequences, total weight= 397 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.814545 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rxqA/info/1rxqA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rxqA/nostruct-align/1rxqA.t06-thin90.a2m.gz, have 89142 columns in 368 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1ql0A/nostruct-align/1ql0A.t06-thin90.a2m.gz # 1ql0A.t06-thin90.a2m with 259 sequences, total weight= 259 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12812 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1ql0A/info/1ql0A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1ql0A/nostruct-align/1ql0A.t06-thin90.a2m.gz, have 89383 columns in 369 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qnrA/nostruct-align/1qnrA.t06-thin90.a2m.gz # 1qnrA.t06-thin90.a2m with 3082 sequences, total weight= 3082 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.789762 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qnrA/info/1qnrA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qnrA/nostruct-align/1qnrA.t06-thin90.a2m.gz, have 89727 columns in 370 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u07A/nostruct-align/1u07A.t06-thin90.a2m.gz # 1u07A.t06-thin90.a2m with 460 sequences, total weight= 460 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24517 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u07A/info/1u07A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1u07A/nostruct-align/1u07A.t06-thin90.a2m.gz, have 89817 columns in 371 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sh8A/nostruct-align/1sh8A.t06-thin90.a2m.gz # 1sh8A.t06-thin90.a2m with 1301 sequences, total weight= 1301 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.957286 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sh8A/info/1sh8A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sh8A/nostruct-align/1sh8A.t06-thin90.a2m.gz, have 89970 columns in 372 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j71A/nostruct-align/1j71A.t06-thin90.a2m.gz # 1j71A.t06-thin90.a2m with 1154 sequences, total weight= 1154 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12818 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j71A/info/1j71A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j71A/nostruct-align/1j71A.t06-thin90.a2m.gz, have 90304 columns in 373 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tr0A/nostruct-align/1tr0A.t06-thin90.a2m.gz # 1tr0A.t06-thin90.a2m with 169 sequences, total weight= 169 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13282 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tr0A/info/1tr0A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tr0A/nostruct-align/1tr0A.t06-thin90.a2m.gz, have 90410 columns in 374 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h32A/nostruct-align/1h32A.t06-thin90.a2m.gz # 1h32A.t06-thin90.a2m with 1746 sequences, total weight= 1746 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.95852 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h32A/info/1h32A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h32A/nostruct-align/1h32A.t06-thin90.a2m.gz, have 90671 columns in 375 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bg6/nostruct-align/1bg6.t06-thin90.a2m.gz # 1bg6.t06-thin90.a2m with 7217 sequences, total weight= 7217 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.852603 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bg6/info/1bg6.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bg6/nostruct-align/1bg6.t06-thin90.a2m.gz, have 91020 columns in 376 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1idpA/nostruct-align/1idpA.t06-thin90.a2m.gz # 1idpA.t06-thin90.a2m with 32 sequences, total weight= 20.8122 avg weight= 0.65038 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1idpA/info/1idpA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1idpA/nostruct-align/1idpA.t06-thin90.a2m.gz, have 91167 columns in 377 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u5xA/nostruct-align/1u5xA.t06-thin90.a2m.gz # 1u5xA.t06-thin90.a2m with 174 sequences, total weight= 174 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26299 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u5xA/info/1u5xA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1u5xA/nostruct-align/1u5xA.t06-thin90.a2m.gz, have 91297 columns in 378 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kmvA/nostruct-align/1kmvA.t06-thin90.a2m.gz # 1kmvA.t06-thin90.a2m with 637 sequences, total weight= 637 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22473 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kmvA/info/1kmvA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kmvA/nostruct-align/1kmvA.t06-thin90.a2m.gz, have 91482 columns in 379 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oi6A/nostruct-align/1oi6A.t06-thin90.a2m.gz # 1oi6A.t06-thin90.a2m with 472 sequences, total weight= 76.8991 avg weight= 0.162922 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30112 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oi6A/info/1oi6A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oi6A/nostruct-align/1oi6A.t06-thin90.a2m.gz, have 91684 columns in 380 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uq5A/nostruct-align/1uq5A.t06-thin90.a2m.gz # 1uq5A.t06-thin90.a2m with 154 sequences, total weight= 154 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17236 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uq5A/info/1uq5A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uq5A/nostruct-align/1uq5A.t06-thin90.a2m.gz, have 91947 columns in 381 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oxjA/nostruct-align/1oxjA.t06-thin90.a2m.gz # 1oxjA.t06-thin90.a2m with 28 sequences, total weight= 12.3213 avg weight= 0.440046 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oxjA/info/1oxjA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oxjA/nostruct-align/1oxjA.t06-thin90.a2m.gz, have 92117 columns in 382 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nxmA/nostruct-align/1nxmA.t06-thin90.a2m.gz # 1nxmA.t06-thin90.a2m with 482 sequences, total weight= 77.308 avg weight= 0.16039 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30099 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nxmA/info/1nxmA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nxmA/nostruct-align/1nxmA.t06-thin90.a2m.gz, have 92311 columns in 383 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s9rA/nostruct-align/1s9rA.t06-thin90.a2m.gz # 1s9rA.t06-thin90.a2m with 453 sequences, total weight= 453 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16357 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s9rA/info/1s9rA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s9rA/nostruct-align/1s9rA.t06-thin90.a2m.gz, have 92720 columns in 384 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i52A/nostruct-align/1i52A.t06-thin90.a2m.gz # 1i52A.t06-thin90.a2m with 3696 sequences, total weight= 3696 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02557 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i52A/info/1i52A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i52A/nostruct-align/1i52A.t06-thin90.a2m.gz, have 92945 columns in 385 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p5vB/nostruct-align/1p5vB.t06-thin90.a2m.gz # 1p5vB.t06-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.614906 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p5vB/info/1p5vB.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p5vB/nostruct-align/1p5vB.t06-thin90.a2m.gz, have 93081 columns in 386 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nq7A/nostruct-align/1nq7A.t06-thin90.a2m.gz # 1nq7A.t06-thin90.a2m with 1142 sequences, total weight= 1142 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.969345 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nq7A/info/1nq7A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nq7A/nostruct-align/1nq7A.t06-thin90.a2m.gz, have 93325 columns in 387 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1is3A/nostruct-align/1is3A.t06-thin90.a2m.gz # 1is3A.t06-thin90.a2m with 339 sequences, total weight= 339 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28131 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1is3A/info/1is3A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1is3A/nostruct-align/1is3A.t06-thin90.a2m.gz, have 93459 columns in 388 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l3kA/nostruct-align/1l3kA.t06-thin90.a2m.gz # 1l3kA.t06-thin90.a2m with 4328 sequences, total weight= 4328 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11051 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l3kA/info/1l3kA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1l3kA/nostruct-align/1l3kA.t06-thin90.a2m.gz, have 93622 columns in 389 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nkr/nostruct-align/1nkr.t06-thin90.a2m.gz # 1nkr.t06-thin90.a2m with 5013 sequences, total weight= 5013 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.961149 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nkr/info/1nkr.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nkr/nostruct-align/1nkr.t06-thin90.a2m.gz, have 93817 columns in 390 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vh4A/nostruct-align/1vh4A.t06-thin90.a2m.gz # 1vh4A.t06-thin90.a2m with 462 sequences, total weight= 462 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27397 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vh4A/info/1vh4A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vh4A/nostruct-align/1vh4A.t06-thin90.a2m.gz, have 94227 columns in 391 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o97C/nostruct-align/1o97C.t06-thin90.a2m.gz # 1o97C.t06-thin90.a2m with 485 sequences, total weight= 126.473 avg weight= 0.260768 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30568 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o97C/info/1o97C.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o97C/nostruct-align/1o97C.t06-thin90.a2m.gz, have 94478 columns in 392 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tyjA/nostruct-align/1tyjA.t06-thin90.a2m.gz # 1tyjA.t06-thin90.a2m with 26 sequences, total weight= 6.10008 avg weight= 0.234619 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tyjA/info/1tyjA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tyjA/nostruct-align/1tyjA.t06-thin90.a2m.gz, have 94648 columns in 393 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vd6A/nostruct-align/1vd6A.t06-thin90.a2m.gz # 1vd6A.t06-thin90.a2m with 867 sequences, total weight= 867 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10984 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vd6A/info/1vd6A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vd6A/nostruct-align/1vd6A.t06-thin90.a2m.gz, have 94866 columns in 394 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vpmA/nostruct-align/1vpmA.t06-thin90.a2m.gz # 1vpmA.t06-thin90.a2m with 1181 sequences, total weight= 1181 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01862 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vpmA/info/1vpmA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vpmA/nostruct-align/1vpmA.t06-thin90.a2m.gz, have 95021 columns in 395 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k77A/nostruct-align/1k77A.t06-thin90.a2m.gz # 1k77A.t06-thin90.a2m with 1419 sequences, total weight= 1419 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.906118 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k77A/info/1k77A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k77A/nostruct-align/1k77A.t06-thin90.a2m.gz, have 95281 columns in 396 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rzhM/nostruct-align/1rzhM.t06-thin90.a2m.gz # 1rzhM.t06-thin90.a2m with 255 sequences, total weight= 16.8139 avg weight= 0.0659368 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rzhM/info/1rzhM.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rzhM/nostruct-align/1rzhM.t06-thin90.a2m.gz, have 95582 columns in 397 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rwzA/nostruct-align/1rwzA.t06-thin90.a2m.gz # 1rwzA.t06-thin90.a2m with 213 sequences, total weight= 213 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16594 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rwzA/info/1rwzA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rwzA/nostruct-align/1rwzA.t06-thin90.a2m.gz, have 95826 columns in 398 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iu8A/nostruct-align/1iu8A.t06-thin90.a2m.gz # 1iu8A.t06-thin90.a2m with 165 sequences, total weight= 137.129 avg weight= 0.831082 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30059 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iu8A/info/1iu8A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iu8A/nostruct-align/1iu8A.t06-thin90.a2m.gz, have 96032 columns in 399 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jh6A/nostruct-align/1jh6A.t06-thin90.a2m.gz # 1jh6A.t06-thin90.a2m with 333 sequences, total weight= 333 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04464 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jh6A/info/1jh6A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jh6A/nostruct-align/1jh6A.t06-thin90.a2m.gz, have 96213 columns in 400 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nykA/nostruct-align/1nykA.t06-thin90.a2m.gz # 1nykA.t06-thin90.a2m with 1625 sequences, total weight= 1625 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09861 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nykA/info/1nykA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nykA/nostruct-align/1nykA.t06-thin90.a2m.gz, have 96369 columns in 401 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w0nA/nostruct-align/1w0nA.t06-thin90.a2m.gz # 1w0nA.t06-thin90.a2m with 6 sequences, total weight= 3.04415 avg weight= 0.507358 13 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w0nA/info/1w0nA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w0nA/nostruct-align/1w0nA.t06-thin90.a2m.gz, have 96489 columns in 402 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u7lA/nostruct-align/1u7lA.t06-thin90.a2m.gz # 1u7lA.t06-thin90.a2m with 73 sequences, total weight= 29.7544 avg weight= 0.407594 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u7lA/info/1u7lA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1u7lA/nostruct-align/1u7lA.t06-thin90.a2m.gz, have 96853 columns in 403 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xgkA/nostruct-align/1xgkA.t06-thin90.a2m.gz # 1xgkA.t06-thin90.a2m with 7956 sequences, total weight= 7956 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.82734 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xgkA/info/1xgkA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xgkA/nostruct-align/1xgkA.t06-thin90.a2m.gz, have 97178 columns in 404 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q8dA/nostruct-align/1q8dA.t06-thin90.a2m.gz # 1q8dA.t06-thin90.a2m with 28 sequences, total weight= 5.41827 avg weight= 0.19351 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q8dA/info/1q8dA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q8dA/nostruct-align/1q8dA.t06-thin90.a2m.gz, have 97278 columns in 405 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fsgA/nostruct-align/1fsgA.t06-thin90.a2m.gz # 1fsgA.t06-thin90.a2m with 2776 sequences, total weight= 2776 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05701 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fsgA/info/1fsgA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fsgA/nostruct-align/1fsgA.t06-thin90.a2m.gz, have 97511 columns in 406 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1ts9A/nostruct-align/1ts9A.t06-thin90.a2m.gz # 1ts9A.t06-thin90.a2m with 71 sequences, total weight= 39.8298 avg weight= 0.560983 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1ts9A/info/1ts9A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1ts9A/nostruct-align/1ts9A.t06-thin90.a2m.gz, have 97609 columns in 407 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kshB/nostruct-align/1kshB.t06-thin90.a2m.gz # 1kshB.t06-thin90.a2m with 53 sequences, total weight= 13.082 avg weight= 0.24683 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kshB/info/1kshB.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kshB/nostruct-align/1kshB.t06-thin90.a2m.gz, have 97751 columns in 408 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y7yA/nostruct-align/1y7yA.t06-thin90.a2m.gz # 1y7yA.t06-thin90.a2m with 1904 sequences, total weight= 1080.14 avg weight= 0.567303 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31592 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y7yA/info/1y7yA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1y7yA/nostruct-align/1y7yA.t06-thin90.a2m.gz, have 97820 columns in 409 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a4iA/nostruct-align/1a4iA.t06-thin90.a2m.gz # 1a4iA.t06-thin90.a2m with 701 sequences, total weight= 77.94 avg weight= 0.111184 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30187 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a4iA/info/1a4iA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1a4iA/nostruct-align/1a4iA.t06-thin90.a2m.gz, have 98105 columns in 410 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jubA/nostruct-align/1jubA.t06-thin90.a2m.gz # 1jubA.t06-thin90.a2m with 2956 sequences, total weight= 2956 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00788 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jubA/info/1jubA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jubA/nostruct-align/1jubA.t06-thin90.a2m.gz, have 98416 columns in 411 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oflA/nostruct-align/1oflA.t06-thin90.a2m.gz # 1oflA.t06-thin90.a2m with 990 sequences, total weight= 990 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.910873 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oflA/info/1oflA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oflA/nostruct-align/1oflA.t06-thin90.a2m.gz, have 98897 columns in 412 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wcv1/nostruct-align/1wcv1.t06-thin90.a2m.gz # 1wcv1.t06-thin90.a2m with 3904 sequences, total weight= 3904 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.957907 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wcv1/info/1wcv1.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wcv1/nostruct-align/1wcv1.t06-thin90.a2m.gz, have 99140 columns in 413 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vhnA/nostruct-align/1vhnA.t06-thin90.a2m.gz # 1vhnA.t06-thin90.a2m with 1613 sequences, total weight= 1613 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07318 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vhnA/info/1vhnA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vhnA/nostruct-align/1vhnA.t06-thin90.a2m.gz, have 99445 columns in 414 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c5eA/nostruct-align/1c5eA.t06-thin90.a2m.gz # 1c5eA.t06-thin90.a2m with 13 sequences, total weight= 6.72745 avg weight= 0.517496 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c5eA/info/1c5eA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1c5eA/nostruct-align/1c5eA.t06-thin90.a2m.gz, have 99540 columns in 415 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rwjA/nostruct-align/1rwjA.t06-thin90.a2m.gz # 1rwjA.t06-thin90.a2m with 101 sequences, total weight= 35.5657 avg weight= 0.352136 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rwjA/info/1rwjA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rwjA/nostruct-align/1rwjA.t06-thin90.a2m.gz, have 99621 columns in 416 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p3dA/nostruct-align/1p3dA.t06-thin90.a2m.gz # 1p3dA.t06-thin90.a2m with 2191 sequences, total weight= 2191 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11045 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p3dA/info/1p3dA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p3dA/nostruct-align/1p3dA.t06-thin90.a2m.gz, have 100084 columns in 417 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x8qA/nostruct-align/1x8qA.t06-thin90.a2m.gz # 1x8qA.t06-thin90.a2m with 130 sequences, total weight= 130 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17069 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x8qA/info/1x8qA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1x8qA/nostruct-align/1x8qA.t06-thin90.a2m.gz, have 100268 columns in 418 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2s/2sak/nostruct-align/2sak.t06-thin90.a2m.gz # 2sak.t06-thin90.a2m with 6 sequences, total weight= 5.94261 avg weight= 0.990435 11 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2s/2sak/info/2sak.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/2s/2sak/nostruct-align/2sak.t06-thin90.a2m.gz, have 100389 columns in 419 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d0qA/nostruct-align/1d0qA.t06-thin90.a2m.gz # 1d0qA.t06-thin90.a2m with 365 sequences, total weight= 49.7716 avg weight= 0.136361 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30077 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d0qA/info/1d0qA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d0qA/nostruct-align/1d0qA.t06-thin90.a2m.gz, have 100491 columns in 420 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xe7A/nostruct-align/1xe7A.t06-thin90.a2m.gz # 1xe7A.t06-thin90.a2m with 133 sequences, total weight= 38.7713 avg weight= 0.291514 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xe7A/info/1xe7A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xe7A/nostruct-align/1xe7A.t06-thin90.a2m.gz, have 100677 columns in 421 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1npyA/nostruct-align/1npyA.t06-thin90.a2m.gz # 1npyA.t06-thin90.a2m with 792 sequences, total weight= 792 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2885 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1npyA/info/1npyA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1npyA/nostruct-align/1npyA.t06-thin90.a2m.gz, have 100946 columns in 422 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bl8A/nostruct-align/2bl8A.t06-thin90.a2m.gz # 2bl8A.t06-thin90.a2m with 13 sequences, total weight= 7.01177 avg weight= 0.539367 19 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bl8A/info/2bl8A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/2b/2bl8A/nostruct-align/2bl8A.t06-thin90.a2m.gz, have 101039 columns in 423 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fs7A/nostruct-align/1fs7A.t06-thin90.a2m.gz # 1fs7A.t06-thin90.a2m with 962 sequences, total weight= 962 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.851043 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fs7A/info/1fs7A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fs7A/nostruct-align/1fs7A.t06-thin90.a2m.gz, have 101510 columns in 424 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eazA/nostruct-align/1eazA.t06-thin90.a2m.gz # 1eazA.t06-thin90.a2m with 376 sequences, total weight= 376 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0124 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eazA/info/1eazA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1eazA/nostruct-align/1eazA.t06-thin90.a2m.gz, have 101613 columns in 425 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pg6A/nostruct-align/1pg6A.t06-thin90.a2m.gz # 1pg6A.t06-thin90.a2m with 191 sequences, total weight= 112.506 avg weight= 0.589034 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30133 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pg6A/info/1pg6A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pg6A/nostruct-align/1pg6A.t06-thin90.a2m.gz, have 101829 columns in 426 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uj8A/nostruct-align/1uj8A.t06-thin90.a2m.gz # 1uj8A.t06-thin90.a2m with 70 sequences, total weight= 8.48899 avg weight= 0.121271 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uj8A/info/1uj8A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uj8A/nostruct-align/1uj8A.t06-thin90.a2m.gz, have 101902 columns in 427 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1npsA/nostruct-align/1npsA.t06-thin90.a2m.gz # 1npsA.t06-thin90.a2m with 21 sequences, total weight= 12.1877 avg weight= 0.580366 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1npsA/info/1npsA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1npsA/nostruct-align/1npsA.t06-thin90.a2m.gz, have 101990 columns in 428 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ypqA/nostruct-align/1ypqA.t06-thin90.a2m.gz # 1ypqA.t06-thin90.a2m with 2305 sequences, total weight= 2305 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01616 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ypqA/info/1ypqA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1ypqA/nostruct-align/1ypqA.t06-thin90.a2m.gz, have 102121 columns in 429 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1arb/nostruct-align/1arb.t06-thin90.a2m.gz # 1arb.t06-thin90.a2m with 3343 sequences, total weight= 3343 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11267 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1arb/info/1arb.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1arb/nostruct-align/1arb.t06-thin90.a2m.gz, have 102384 columns in 430 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jyaA/nostruct-align/1jyaA.t06-thin90.a2m.gz # 1jyaA.t06-thin90.a2m with 5 sequences, total weight= 4.88713 avg weight= 0.977426 11 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jyaA/info/1jyaA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jyaA/nostruct-align/1jyaA.t06-thin90.a2m.gz, have 102501 columns in 431 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yndA/nostruct-align/1yndA.t06-thin90.a2m.gz # 1yndA.t06-thin90.a2m with 1457 sequences, total weight= 83.8985 avg weight= 0.057583 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30466 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yndA/info/1yndA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1yndA/nostruct-align/1yndA.t06-thin90.a2m.gz, have 102665 columns in 432 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i19A/nostruct-align/1i19A.t06-thin90.a2m.gz # 1i19A.t06-thin90.a2m with 1933 sequences, total weight= 1933 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1005 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i19A/info/1i19A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i19A/nostruct-align/1i19A.t06-thin90.a2m.gz, have 103206 columns in 433 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dljA/nostruct-align/1dljA.t06-thin90.a2m.gz # 1dljA.t06-thin90.a2m with 4423 sequences, total weight= 4423 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0144 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dljA/info/1dljA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dljA/nostruct-align/1dljA.t06-thin90.a2m.gz, have 103608 columns in 434 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1go3E/nostruct-align/1go3E.t06-thin90.a2m.gz # 1go3E.t06-thin90.a2m with 1844 sequences, total weight= 1844 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08779 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1go3E/info/1go3E.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1go3E/nostruct-align/1go3E.t06-thin90.a2m.gz, have 103785 columns in 435 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fo8A/nostruct-align/1fo8A.t06-thin90.a2m.gz # 1fo8A.t06-thin90.a2m with 1958 sequences, total weight= 1958 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.817318 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fo8A/info/1fo8A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fo8A/nostruct-align/1fo8A.t06-thin90.a2m.gz, have 104115 columns in 436 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bdo/nostruct-align/1bdo.t06-thin90.a2m.gz # 1bdo.t06-thin90.a2m with 904 sequences, total weight= 44.9954 avg weight= 0.0497736 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.302 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bdo/info/1bdo.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bdo/nostruct-align/1bdo.t06-thin90.a2m.gz, have 104195 columns in 437 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rwhA/nostruct-align/1rwhA.t06-thin90.a2m.gz # 1rwhA.t06-thin90.a2m with 82 sequences, total weight= 82 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10606 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rwhA/info/1rwhA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rwhA/nostruct-align/1rwhA.t06-thin90.a2m.gz, have 104949 columns in 438 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j7xA/nostruct-align/1j7xA.t06-thin90.a2m.gz # 1j7xA.t06-thin90.a2m with 775 sequences, total weight= 775 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17532 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j7xA/info/1j7xA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j7xA/nostruct-align/1j7xA.t06-thin90.a2m.gz, have 105251 columns in 439 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ukkA/nostruct-align/1ukkA.t06-thin90.a2m.gz # 1ukkA.t06-thin90.a2m with 708 sequences, total weight= 708 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11124 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ukkA/info/1ukkA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ukkA/nostruct-align/1ukkA.t06-thin90.a2m.gz, have 105392 columns in 440 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m15A/nostruct-align/1m15A.t06-thin90.a2m.gz # 1m15A.t06-thin90.a2m with 234 sequences, total weight= 31.9187 avg weight= 0.136405 42 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m15A/info/1m15A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m15A/nostruct-align/1m15A.t06-thin90.a2m.gz, have 105748 columns in 441 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bkrA/nostruct-align/1bkrA.t06-thin90.a2m.gz # 1bkrA.t06-thin90.a2m with 312 sequences, total weight= 83.2352 avg weight= 0.266779 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30251 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bkrA/info/1bkrA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bkrA/nostruct-align/1bkrA.t06-thin90.a2m.gz, have 105856 columns in 442 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qlwA/nostruct-align/1qlwA.t06-thin90.a2m.gz # 1qlwA.t06-thin90.a2m with 11654 sequences, total weight= 11654 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.771846 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qlwA/info/1qlwA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qlwA/nostruct-align/1qlwA.t06-thin90.a2m.gz, have 106174 columns in 443 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x8vA/nostruct-align/1x8vA.t06-thin90.a2m.gz # 1x8vA.t06-thin90.a2m with 5692 sequences, total weight= 5692 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01857 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x8vA/info/1x8vA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1x8vA/nostruct-align/1x8vA.t06-thin90.a2m.gz, have 106603 columns in 444 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1elkA/nostruct-align/1elkA.t06-thin90.a2m.gz # 1elkA.t06-thin90.a2m with 224 sequences, total weight= 208.355 avg weight= 0.930154 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30055 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1elkA/info/1elkA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1elkA/nostruct-align/1elkA.t06-thin90.a2m.gz, have 106756 columns in 445 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f1mA/nostruct-align/1f1mA.t06-thin90.a2m.gz # 1f1mA.t06-thin90.a2m with 144 sequences, total weight= 6.13118 avg weight= 0.0425777 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f1mA/info/1f1mA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f1mA/nostruct-align/1f1mA.t06-thin90.a2m.gz, have 106918 columns in 446 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vkkA/nostruct-align/1vkkA.t06-thin90.a2m.gz # 1vkkA.t06-thin90.a2m with 274 sequences, total weight= 242.573 avg weight= 0.885302 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30081 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vkkA/info/1vkkA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vkkA/nostruct-align/1vkkA.t06-thin90.a2m.gz, have 107055 columns in 447 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r2qA/nostruct-align/1r2qA.t06-thin90.a2m.gz # 1r2qA.t06-thin90.a2m with 4879 sequences, total weight= 4879 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12925 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r2qA/info/1r2qA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r2qA/nostruct-align/1r2qA.t06-thin90.a2m.gz, have 107225 columns in 448 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1edg/nostruct-align/1edg.t06-thin90.a2m.gz # 1edg.t06-thin90.a2m with 2378 sequences, total weight= 2378 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.842029 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1edg/info/1edg.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1edg/nostruct-align/1edg.t06-thin90.a2m.gz, have 107605 columns in 449 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cnzA/nostruct-align/1cnzA.t06-thin90.a2m.gz # 1cnzA.t06-thin90.a2m with 990 sequences, total weight= 69.8349 avg weight= 0.0705403 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30209 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cnzA/info/1cnzA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cnzA/nostruct-align/1cnzA.t06-thin90.a2m.gz, have 107968 columns in 450 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w96A/nostruct-align/1w96A.t06-thin90.a2m.gz # 1w96A.t06-thin90.a2m with 3758 sequences, total weight= 3758 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15824 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w96A/info/1w96A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w96A/nostruct-align/1w96A.t06-thin90.a2m.gz, have 108517 columns in 451 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k4nA/nostruct-align/1k4nA.t06-thin90.a2m.gz # 1k4nA.t06-thin90.a2m with 39 sequences, total weight= 10.5585 avg weight= 0.270732 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k4nA/info/1k4nA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k4nA/nostruct-align/1k4nA.t06-thin90.a2m.gz, have 108700 columns in 452 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gxrA/nostruct-align/1gxrA.t06-thin90.a2m.gz # 1gxrA.t06-thin90.a2m with 10802 sequences, total weight= 10802 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.761882 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gxrA/info/1gxrA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gxrA/nostruct-align/1gxrA.t06-thin90.a2m.gz, have 109035 columns in 453 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qv9A/nostruct-align/1qv9A.t06-thin90.a2m.gz # 1qv9A.t06-thin90.a2m with 13 sequences, total weight= 3.99171 avg weight= 0.307054 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qv9A/info/1qv9A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qv9A/nostruct-align/1qv9A.t06-thin90.a2m.gz, have 109317 columns in 454 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rwiA/nostruct-align/1rwiA.t06-thin90.a2m.gz # 1rwiA.t06-thin90.a2m with 10118 sequences, total weight= 10118 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.751364 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rwiA/info/1rwiA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rwiA/nostruct-align/1rwiA.t06-thin90.a2m.gz, have 109573 columns in 455 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2dpmA/nostruct-align/2dpmA.t06-thin90.a2m.gz # 2dpmA.t06-thin90.a2m with 388 sequences, total weight= 388 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09949 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2dpmA/info/2dpmA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/2d/2dpmA/nostruct-align/2dpmA.t06-thin90.a2m.gz, have 109831 columns in 456 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u14A/nostruct-align/1u14A.t06-thin90.a2m.gz # 1u14A.t06-thin90.a2m with 60 sequences, total weight= 16.7299 avg weight= 0.278832 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u14A/info/1u14A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1u14A/nostruct-align/1u14A.t06-thin90.a2m.gz, have 110000 columns in 457 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54H/nostruct-align/1v54H.t06-thin90.a2m.gz # 1v54H.t06-thin90.a2m with 49 sequences, total weight= 9.45561 avg weight= 0.192972 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54H/info/1v54H.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v54H/nostruct-align/1v54H.t06-thin90.a2m.gz, have 110079 columns in 458 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bx4A/nostruct-align/1bx4A.t06-thin90.a2m.gz # 1bx4A.t06-thin90.a2m with 2391 sequences, total weight= 2391 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03318 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bx4A/info/1bx4A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bx4A/nostruct-align/1bx4A.t06-thin90.a2m.gz, have 110421 columns in 459 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e42A/nostruct-align/1e42A.t06-thin90.a2m.gz # 1e42A.t06-thin90.a2m with 40 sequences, total weight= 27.1391 avg weight= 0.678477 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e42A/info/1e42A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e42A/nostruct-align/1e42A.t06-thin90.a2m.gz, have 110654 columns in 460 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t56A/nostruct-align/1t56A.t06-thin90.a2m.gz # 1t56A.t06-thin90.a2m with 5472 sequences, total weight= 5472 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.819336 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t56A/info/1t56A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t56A/nostruct-align/1t56A.t06-thin90.a2m.gz, have 110847 columns in 461 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tmxA/nostruct-align/1tmxA.t06-thin90.a2m.gz # 1tmxA.t06-thin90.a2m with 423 sequences, total weight= 155.394 avg weight= 0.367363 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30193 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tmxA/info/1tmxA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tmxA/nostruct-align/1tmxA.t06-thin90.a2m.gz, have 111139 columns in 462 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lmiA/nostruct-align/1lmiA.t06-thin90.a2m.gz # 1lmiA.t06-thin90.a2m with 10 sequences, total weight= 4.47282 avg weight= 0.447282 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lmiA/info/1lmiA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lmiA/nostruct-align/1lmiA.t06-thin90.a2m.gz, have 111270 columns in 463 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gp0A/nostruct-align/1gp0A.t06-thin90.a2m.gz # 1gp0A.t06-thin90.a2m with 348 sequences, total weight= 348 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25303 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gp0A/info/1gp0A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gp0A/nostruct-align/1gp0A.t06-thin90.a2m.gz, have 111403 columns in 464 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1opd/nostruct-align/1opd.t06-thin90.a2m.gz # 1opd.t06-thin90.a2m with 363 sequences, total weight= 27.9543 avg weight= 0.0770092 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1opd/info/1opd.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1opd/nostruct-align/1opd.t06-thin90.a2m.gz, have 111488 columns in 465 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vl7A/nostruct-align/1vl7A.t06-thin90.a2m.gz # 1vl7A.t06-thin90.a2m with 85 sequences, total weight= 85 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01223 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vl7A/info/1vl7A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vl7A/nostruct-align/1vl7A.t06-thin90.a2m.gz, have 111623 columns in 466 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mqoA/nostruct-align/1mqoA.t06-thin90.a2m.gz # 1mqoA.t06-thin90.a2m with 4544 sequences, total weight= 4544 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.86928 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mqoA/info/1mqoA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mqoA/nostruct-align/1mqoA.t06-thin90.a2m.gz, have 111844 columns in 467 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a73A/nostruct-align/1a73A.t06-thin90.a2m.gz # 1a73A.t06-thin90.a2m with 19 sequences, total weight= 19 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04928 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a73A/info/1a73A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1a73A/nostruct-align/1a73A.t06-thin90.a2m.gz, have 112006 columns in 468 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1no5A/nostruct-align/1no5A.t06-thin90.a2m.gz # 1no5A.t06-thin90.a2m with 624 sequences, total weight= 624 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0543 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1no5A/info/1no5A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1no5A/nostruct-align/1no5A.t06-thin90.a2m.gz, have 112106 columns in 469 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fltX/nostruct-align/1fltX.t06-thin90.a2m.gz # 1fltX.t06-thin90.a2m with 57 sequences, total weight= 31.5243 avg weight= 0.553058 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fltX/info/1fltX.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fltX/nostruct-align/1fltX.t06-thin90.a2m.gz, have 112201 columns in 470 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lf7A/nostruct-align/1lf7A.t06-thin90.a2m.gz # 1lf7A.t06-thin90.a2m with 596 sequences, total weight= 596 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.964619 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lf7A/info/1lf7A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lf7A/nostruct-align/1lf7A.t06-thin90.a2m.gz, have 112365 columns in 471 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ew0A/nostruct-align/1ew0A.t06-thin90.a2m.gz # 1ew0A.t06-thin90.a2m with 10026 sequences, total weight= 10026 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.842063 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ew0A/info/1ew0A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ew0A/nostruct-align/1ew0A.t06-thin90.a2m.gz, have 112495 columns in 472 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nxuA/nostruct-align/1nxuA.t06-thin90.a2m.gz # 1nxuA.t06-thin90.a2m with 186 sequences, total weight= 46.4414 avg weight= 0.249685 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nxuA/info/1nxuA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nxuA/nostruct-align/1nxuA.t06-thin90.a2m.gz, have 112827 columns in 473 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f9yA/nostruct-align/1f9yA.t06-thin90.a2m.gz # 1f9yA.t06-thin90.a2m with 420 sequences, total weight= 40.7528 avg weight= 0.0970304 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30082 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f9yA/info/1f9yA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f9yA/nostruct-align/1f9yA.t06-thin90.a2m.gz, have 112985 columns in 474 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3e/3ezmA/nostruct-align/3ezmA.t06-thin90.a2m.gz # 3ezmA.t06-thin90.a2m with 46 sequences, total weight= 34.4913 avg weight= 0.74981 42 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3e/3ezmA/info/3ezmA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/3e/3ezmA/nostruct-align/3ezmA.t06-thin90.a2m.gz, have 113086 columns in 475 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vmhA/nostruct-align/1vmhA.t06-thin90.a2m.gz # 1vmhA.t06-thin90.a2m with 276 sequences, total weight= 17.6539 avg weight= 0.0639632 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vmhA/info/1vmhA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vmhA/nostruct-align/1vmhA.t06-thin90.a2m.gz, have 113215 columns in 476 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h05A/nostruct-align/1h05A.t06-thin90.a2m.gz # 1h05A.t06-thin90.a2m with 306 sequences, total weight= 11.6459 avg weight= 0.0380587 37 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h05A/info/1h05A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h05A/nostruct-align/1h05A.t06-thin90.a2m.gz, have 113353 columns in 477 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s7iA/nostruct-align/1s7iA.t06-thin90.a2m.gz # 1s7iA.t06-thin90.a2m with 180 sequences, total weight= 75.7397 avg weight= 0.420776 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30095 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s7iA/info/1s7iA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s7iA/nostruct-align/1s7iA.t06-thin90.a2m.gz, have 113477 columns in 478 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p9hA/nostruct-align/1p9hA.t06-thin90.a2m.gz # 1p9hA.t06-thin90.a2m with 585 sequences, total weight= 55.5466 avg weight= 0.0949515 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p9hA/info/1p9hA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p9hA/nostruct-align/1p9hA.t06-thin90.a2m.gz, have 113656 columns in 479 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mwqA/nostruct-align/1mwqA.t06-thin90.a2m.gz # 1mwqA.t06-thin90.a2m with 277 sequences, total weight= 118.648 avg weight= 0.428332 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30296 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mwqA/info/1mwqA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mwqA/nostruct-align/1mwqA.t06-thin90.a2m.gz, have 113756 columns in 480 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ifrA/nostruct-align/1ifrA.t06-thin90.a2m.gz # 1ifrA.t06-thin90.a2m with 102 sequences, total weight= 29.6143 avg weight= 0.290337 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ifrA/info/1ifrA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ifrA/nostruct-align/1ifrA.t06-thin90.a2m.gz, have 113869 columns in 481 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ej0A/nostruct-align/1ej0A.t06-thin90.a2m.gz # 1ej0A.t06-thin90.a2m with 2188 sequences, total weight= 2188 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02462 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ej0A/info/1ej0A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ej0A/nostruct-align/1ej0A.t06-thin90.a2m.gz, have 114049 columns in 482 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kq6A/nostruct-align/1kq6A.t06-thin90.a2m.gz # 1kq6A.t06-thin90.a2m with 555 sequences, total weight= 555 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04025 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kq6A/info/1kq6A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kq6A/nostruct-align/1kq6A.t06-thin90.a2m.gz, have 114189 columns in 483 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3s/3sdhA/nostruct-align/3sdhA.t06-thin90.a2m.gz # 3sdhA.t06-thin90.a2m with 1049 sequences, total weight= 1049 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19814 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3s/3sdhA/info/3sdhA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/3s/3sdhA/nostruct-align/3sdhA.t06-thin90.a2m.gz, have 114334 columns in 484 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1snyA/nostruct-align/1snyA.t06-thin90.a2m.gz # 1snyA.t06-thin90.a2m with 13037 sequences, total weight= 13037 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09949 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1snyA/info/1snyA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1snyA/nostruct-align/1snyA.t06-thin90.a2m.gz, have 114582 columns in 485 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x6oA/nostruct-align/1x6oA.t06-thin90.a2m.gz # 1x6oA.t06-thin90.a2m with 126 sequences, total weight= 23.3566 avg weight= 0.18537 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x6oA/info/1x6oA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1x6oA/nostruct-align/1x6oA.t06-thin90.a2m.gz, have 114725 columns in 486 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jpzA/nostruct-align/1jpzA.t06-thin90.a2m.gz # 1jpzA.t06-thin90.a2m with 5720 sequences, total weight= 5720 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.996394 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jpzA/info/1jpzA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jpzA/nostruct-align/1jpzA.t06-thin90.a2m.gz, have 115181 columns in 487 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2t/2tnfA/nostruct-align/2tnfA.t06-thin90.a2m.gz # 2tnfA.t06-thin90.a2m with 183 sequences, total weight= 156.147 avg weight= 0.853264 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30073 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2t/2tnfA/info/2tnfA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/2t/2tnfA/nostruct-align/2tnfA.t06-thin90.a2m.gz, have 115329 columns in 488 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uwfA/nostruct-align/1uwfA.t06-thin90.a2m.gz # 1uwfA.t06-thin90.a2m with 10 sequences, total weight= 5.67266 avg weight= 0.567266 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uwfA/info/1uwfA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uwfA/nostruct-align/1uwfA.t06-thin90.a2m.gz, have 115487 columns in 489 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d4xG/nostruct-align/1d4xG.t06-thin90.a2m.gz # 1d4xG.t06-thin90.a2m with 569 sequences, total weight= 569 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1199 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d4xG/info/1d4xG.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d4xG/nostruct-align/1d4xG.t06-thin90.a2m.gz, have 115611 columns in 490 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f86A/nostruct-align/1f86A.t06-thin90.a2m.gz # 1f86A.t06-thin90.a2m with 152 sequences, total weight= 15.0087 avg weight= 0.0987415 42 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f86A/info/1f86A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f86A/nostruct-align/1f86A.t06-thin90.a2m.gz, have 115726 columns in 491 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1orrA/nostruct-align/1orrA.t06-thin90.a2m.gz # 1orrA.t06-thin90.a2m with 12913 sequences, total weight= 12913 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.908135 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1orrA/info/1orrA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1orrA/nostruct-align/1orrA.t06-thin90.a2m.gz, have 116064 columns in 492 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m4iA/nostruct-align/1m4iA.t06-thin90.a2m.gz # 1m4iA.t06-thin90.a2m with 7840 sequences, total weight= 7840 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.817438 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m4iA/info/1m4iA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m4iA/nostruct-align/1m4iA.t06-thin90.a2m.gz, have 116245 columns in 493 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rtqA/nostruct-align/1rtqA.t06-thin90.a2m.gz # 1rtqA.t06-thin90.a2m with 3140 sequences, total weight= 3140 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.89701 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rtqA/info/1rtqA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rtqA/nostruct-align/1rtqA.t06-thin90.a2m.gz, have 116536 columns in 494 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g6sA/nostruct-align/1g6sA.t06-thin90.a2m.gz # 1g6sA.t06-thin90.a2m with 831 sequences, total weight= 106.101 avg weight= 0.127679 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30686 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g6sA/info/1g6sA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g6sA/nostruct-align/1g6sA.t06-thin90.a2m.gz, have 116963 columns in 495 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r2mA/nostruct-align/1r2mA.t06-thin90.a2m.gz # 1r2mA.t06-thin90.a2m with 20 sequences, total weight= 4.59856 avg weight= 0.229928 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r2mA/info/1r2mA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r2mA/nostruct-align/1r2mA.t06-thin90.a2m.gz, have 117033 columns in 496 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nqzA/nostruct-align/1nqzA.t06-thin90.a2m.gz # 1nqzA.t06-thin90.a2m with 3614 sequences, total weight= 3614 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.867136 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nqzA/info/1nqzA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nqzA/nostruct-align/1nqzA.t06-thin90.a2m.gz, have 117204 columns in 497 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2e/2eng/nostruct-align/2eng.t06-thin90.a2m.gz # 2eng.t06-thin90.a2m with 38 sequences, total weight= 7.32481 avg weight= 0.192758 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2e/2eng/info/2eng.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/2e/2eng/nostruct-align/2eng.t06-thin90.a2m.gz, have 117409 columns in 498 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kafA/nostruct-align/1kafA.t06-thin90.a2m.gz # 1kafA.t06-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.964603 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kafA/info/1kafA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kafA/nostruct-align/1kafA.t06-thin90.a2m.gz, have 117517 columns in 499 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1ku3A/nostruct-align/1ku3A.t06-thin90.a2m.gz # 1ku3A.t06-thin90.a2m with 324 sequences, total weight= 12.0382 avg weight= 0.037155 43 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1ku3A/info/1ku3A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1ku3A/nostruct-align/1ku3A.t06-thin90.a2m.gz, have 117578 columns in 500 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rkqA/nostruct-align/1rkqA.t06-thin90.a2m.gz # 1rkqA.t06-thin90.a2m with 4360 sequences, total weight= 4360 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.948063 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rkqA/info/1rkqA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rkqA/nostruct-align/1rkqA.t06-thin90.a2m.gz, have 117849 columns in 501 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qg8A/nostruct-align/1qg8A.t06-thin90.a2m.gz # 1qg8A.t06-thin90.a2m with 5792 sequences, total weight= 5792 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.816266 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qg8A/info/1qg8A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qg8A/nostruct-align/1qg8A.t06-thin90.a2m.gz, have 118087 columns in 502 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lm5A/nostruct-align/1lm5A.t06-thin90.a2m.gz # 1lm5A.t06-thin90.a2m with 237 sequences, total weight= 237 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28611 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lm5A/info/1lm5A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lm5A/nostruct-align/1lm5A.t06-thin90.a2m.gz, have 118276 columns in 503 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cuaA/nostruct-align/2cuaA.t06-thin90.a2m.gz # 2cuaA.t06-thin90.a2m with 1409 sequences, total weight= 60.8323 avg weight= 0.0431741 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30222 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cuaA/info/2cuaA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/2c/2cuaA/nostruct-align/2cuaA.t06-thin90.a2m.gz, have 118398 columns in 504 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mla/nostruct-align/1mla.t06-thin90.a2m.gz # 1mla.t06-thin90.a2m with 1856 sequences, total weight= 1856 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22883 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mla/info/1mla.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mla/nostruct-align/1mla.t06-thin90.a2m.gz, have 118703 columns in 505 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f9vA/nostruct-align/1f9vA.t06-thin90.a2m.gz # 1f9vA.t06-thin90.a2m with 1295 sequences, total weight= 107.775 avg weight= 0.0832239 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31019 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f9vA/info/1f9vA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f9vA/nostruct-align/1f9vA.t06-thin90.a2m.gz, have 119016 columns in 506 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s2oA/nostruct-align/1s2oA.t06-thin90.a2m.gz # 1s2oA.t06-thin90.a2m with 4274 sequences, total weight= 4274 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.891207 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s2oA/info/1s2oA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s2oA/nostruct-align/1s2oA.t06-thin90.a2m.gz, have 119260 columns in 507 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k92A/nostruct-align/1k92A.t06-thin90.a2m.gz # 1k92A.t06-thin90.a2m with 1884 sequences, total weight= 1884 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14496 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k92A/info/1k92A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k92A/nostruct-align/1k92A.t06-thin90.a2m.gz, have 119704 columns in 508 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i4jA/nostruct-align/1i4jA.t06-thin90.a2m.gz # 1i4jA.t06-thin90.a2m with 458 sequences, total weight= 48.7054 avg weight= 0.106344 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30039 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i4jA/info/1i4jA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i4jA/nostruct-align/1i4jA.t06-thin90.a2m.gz, have 119814 columns in 509 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q3oA/nostruct-align/1q3oA.t06-thin90.a2m.gz # 1q3oA.t06-thin90.a2m with 1896 sequences, total weight= 1896 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.179 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q3oA/info/1q3oA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q3oA/nostruct-align/1q3oA.t06-thin90.a2m.gz, have 119918 columns in 510 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1euvA/nostruct-align/1euvA.t06-thin90.a2m.gz # 1euvA.t06-thin90.a2m with 607 sequences, total weight= 607 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.96402 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1euvA/info/1euvA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1euvA/nostruct-align/1euvA.t06-thin90.a2m.gz, have 120139 columns in 511 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d3gA/nostruct-align/1d3gA.t06-thin90.a2m.gz # 1d3gA.t06-thin90.a2m with 2785 sequences, total weight= 2785 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00851 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d3gA/info/1d3gA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d3gA/nostruct-align/1d3gA.t06-thin90.a2m.gz, have 120499 columns in 512 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uufA/nostruct-align/1uufA.t06-thin90.a2m.gz # 1uufA.t06-thin90.a2m with 5018 sequences, total weight= 5018 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17623 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uufA/info/1uufA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uufA/nostruct-align/1uufA.t06-thin90.a2m.gz, have 120838 columns in 513 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wmaA/nostruct-align/1wmaA.t06-thin90.a2m.gz # 1wmaA.t06-thin90.a2m with 13019 sequences, total weight= 13019 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02591 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wmaA/info/1wmaA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wmaA/nostruct-align/1wmaA.t06-thin90.a2m.gz, have 121113 columns in 514 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qveA/nostruct-align/1qveA.t06-thin90.a2m.gz # 1qveA.t06-thin90.a2m with 242 sequences, total weight= 91.9277 avg weight= 0.379866 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30115 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qveA/info/1qveA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qveA/nostruct-align/1qveA.t06-thin90.a2m.gz, have 121239 columns in 515 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qazA/nostruct-align/1qazA.t06-thin90.a2m.gz # 1qazA.t06-thin90.a2m with 77 sequences, total weight= 77 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01236 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qazA/info/1qazA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qazA/nostruct-align/1qazA.t06-thin90.a2m.gz, have 121590 columns in 516 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cczA/nostruct-align/1cczA.t06-thin90.a2m.gz # 1cczA.t06-thin90.a2m with 5697 sequences, total weight= 5697 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.902865 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cczA/info/1cczA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cczA/nostruct-align/1cczA.t06-thin90.a2m.gz, have 121761 columns in 517 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p0zA/nostruct-align/1p0zA.t06-thin90.a2m.gz # 1p0zA.t06-thin90.a2m with 96 sequences, total weight= 29.3156 avg weight= 0.305371 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p0zA/info/1p0zA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p0zA/nostruct-align/1p0zA.t06-thin90.a2m.gz, have 121892 columns in 518 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n9eA/nostruct-align/1n9eA.t06-thin90.a2m.gz # 1n9eA.t06-thin90.a2m with 177 sequences, total weight= 76.4566 avg weight= 0.431958 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n9eA/info/1n9eA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n9eA/nostruct-align/1n9eA.t06-thin90.a2m.gz, have 122627 columns in 519 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l8bA/nostruct-align/1l8bA.t06-thin90.a2m.gz # 1l8bA.t06-thin90.a2m with 190 sequences, total weight= 116.977 avg weight= 0.615666 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30166 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l8bA/info/1l8bA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1l8bA/nostruct-align/1l8bA.t06-thin90.a2m.gz, have 122804 columns in 520 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vkeA/nostruct-align/1vkeA.t06-thin90.a2m.gz # 1vkeA.t06-thin90.a2m with 778 sequences, total weight= 778 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04759 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vkeA/info/1vkeA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vkeA/nostruct-align/1vkeA.t06-thin90.a2m.gz, have 122921 columns in 521 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t06-thin90.a2m.gz # 1b8oA.t06-thin90.a2m with 933 sequences, total weight= 933 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08459 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b8oA/info/1b8oA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t06-thin90.a2m.gz, have 123201 columns in 522 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vcaA/nostruct-align/1vcaA.t06-thin90.a2m.gz # 1vcaA.t06-thin90.a2m with 10369 sequences, total weight= 10369 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.846261 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vcaA/info/1vcaA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vcaA/nostruct-align/1vcaA.t06-thin90.a2m.gz, have 123400 columns in 523 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qq9A/nostruct-align/1qq9A.t06-thin90.a2m.gz # 1qq9A.t06-thin90.a2m with 3091 sequences, total weight= 3091 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.913488 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qq9A/info/1qq9A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qq9A/nostruct-align/1qq9A.t06-thin90.a2m.gz, have 123677 columns in 524 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xkrA/nostruct-align/1xkrA.t06-thin90.a2m.gz # 1xkrA.t06-thin90.a2m with 231 sequences, total weight= 231 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14575 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xkrA/info/1xkrA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xkrA/nostruct-align/1xkrA.t06-thin90.a2m.gz, have 123882 columns in 525 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uasA/nostruct-align/1uasA.t06-thin90.a2m.gz # 1uasA.t06-thin90.a2m with 491 sequences, total weight= 491 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.991111 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uasA/info/1uasA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uasA/nostruct-align/1uasA.t06-thin90.a2m.gz, have 124244 columns in 526 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y9lA/nostruct-align/1y9lA.t06-thin90.a2m.gz # 1y9lA.t06-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.616166 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y9lA/info/1y9lA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1y9lA/nostruct-align/1y9lA.t06-thin90.a2m.gz, have 124354 columns in 527 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hyvA/nostruct-align/1hyvA.t06-thin90.a2m.gz # 1hyvA.t06-thin90.a2m with 421 sequences, total weight= 120.323 avg weight= 0.285803 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30108 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hyvA/info/1hyvA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hyvA/nostruct-align/1hyvA.t06-thin90.a2m.gz, have 124498 columns in 528 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uxy/nostruct-align/1uxy.t06-thin90.a2m.gz # 1uxy.t06-thin90.a2m with 1903 sequences, total weight= 1903 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1303 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uxy/info/1uxy.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uxy/nostruct-align/1uxy.t06-thin90.a2m.gz, have 124838 columns in 529 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1avwB/nostruct-align/1avwB.t06-thin90.a2m.gz # 1avwB.t06-thin90.a2m with 151 sequences, total weight= 51.1655 avg weight= 0.338845 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1avwB/info/1avwB.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1avwB/nostruct-align/1avwB.t06-thin90.a2m.gz, have 125009 columns in 530 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xszA/nostruct-align/1xszA.t06-thin90.a2m.gz # 1xszA.t06-thin90.a2m with 278 sequences, total weight= 278 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20001 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xszA/info/1xszA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xszA/nostruct-align/1xszA.t06-thin90.a2m.gz, have 125365 columns in 531 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e43A/nostruct-align/1e43A.t06-thin90.a2m.gz # 1e43A.t06-thin90.a2m with 2536 sequences, total weight= 2536 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01371 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e43A/info/1e43A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e43A/nostruct-align/1e43A.t06-thin90.a2m.gz, have 125848 columns in 532 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fxoA/nostruct-align/1fxoA.t06-thin90.a2m.gz # 1fxoA.t06-thin90.a2m with 3422 sequences, total weight= 3422 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09348 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fxoA/info/1fxoA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fxoA/nostruct-align/1fxoA.t06-thin90.a2m.gz, have 126140 columns in 533 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q52A/nostruct-align/1q52A.t06-thin90.a2m.gz # 1q52A.t06-thin90.a2m with 3126 sequences, total weight= 3126 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16153 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q52A/info/1q52A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q52A/nostruct-align/1q52A.t06-thin90.a2m.gz, have 126409 columns in 534 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mnaA/nostruct-align/1mnaA.t06-thin90.a2m.gz # 1mnaA.t06-thin90.a2m with 11576 sequences, total weight= 11576 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.954893 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mnaA/info/1mnaA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mnaA/nostruct-align/1mnaA.t06-thin90.a2m.gz, have 126685 columns in 535 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mugA/nostruct-align/1mugA.t06-thin90.a2m.gz # 1mugA.t06-thin90.a2m with 541 sequences, total weight= 541 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20084 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mugA/info/1mugA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mugA/nostruct-align/1mugA.t06-thin90.a2m.gz, have 126850 columns in 536 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1suuA/nostruct-align/1suuA.t06-thin90.a2m.gz # 1suuA.t06-thin90.a2m with 448 sequences, total weight= 99.7561 avg weight= 0.22267 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30407 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1suuA/info/1suuA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1suuA/nostruct-align/1suuA.t06-thin90.a2m.gz, have 127143 columns in 537 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nf9A/nostruct-align/1nf9A.t06-thin90.a2m.gz # 1nf9A.t06-thin90.a2m with 1022 sequences, total weight= 1022 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07235 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nf9A/info/1nf9A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nf9A/nostruct-align/1nf9A.t06-thin90.a2m.gz, have 127350 columns in 538 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bgf/nostruct-align/1bgf.t06-thin90.a2m.gz # 1bgf.t06-thin90.a2m with 56 sequences, total weight= 21.4 avg weight= 0.382143 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bgf/info/1bgf.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bgf/nostruct-align/1bgf.t06-thin90.a2m.gz, have 127474 columns in 539 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ugiA/nostruct-align/1ugiA.t06-thin90.a2m.gz # 1ugiA.t06-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.584933 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ugiA/info/1ugiA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ugiA/nostruct-align/1ugiA.t06-thin90.a2m.gz, have 127557 columns in 540 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y0uA/nostruct-align/1y0uA.t06-thin90.a2m.gz # 1y0uA.t06-thin90.a2m with 1005 sequences, total weight= 1005 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25751 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y0uA/info/1y0uA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1y0uA/nostruct-align/1y0uA.t06-thin90.a2m.gz, have 127646 columns in 541 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y66A/nostruct-align/1y66A.t06-thin90.a2m.gz # 1y66A.t06-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.514604 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y66A/info/1y66A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1y66A/nostruct-align/1y66A.t06-thin90.a2m.gz, have 127696 columns in 542 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wdpA/nostruct-align/1wdpA.t06-thin90.a2m.gz # 1wdpA.t06-thin90.a2m with 63 sequences, total weight= 29.7586 avg weight= 0.472358 37 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wdpA/info/1wdpA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wdpA/nostruct-align/1wdpA.t06-thin90.a2m.gz, have 128189 columns in 543 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bkaA/nostruct-align/2bkaA.t06-thin90.a2m.gz # 2bkaA.t06-thin90.a2m with 16013 sequences, total weight= 16013 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.911472 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bkaA/info/2bkaA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/2b/2bkaA/nostruct-align/2bkaA.t06-thin90.a2m.gz, have 128420 columns in 544 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bjqA/nostruct-align/2bjqA.t06-thin90.a2m.gz # 2bjqA.t06-thin90.a2m with 13 sequences, total weight= 6.19642 avg weight= 0.476648 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bjqA/info/2bjqA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/2b/2bjqA/nostruct-align/2bjqA.t06-thin90.a2m.gz, have 128760 columns in 545 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sw5A/nostruct-align/1sw5A.t06-thin90.a2m.gz # 1sw5A.t06-thin90.a2m with 486 sequences, total weight= 486 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21974 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sw5A/info/1sw5A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sw5A/nostruct-align/1sw5A.t06-thin90.a2m.gz, have 129030 columns in 546 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mqkL/nostruct-align/1mqkL.t06-thin90.a2m.gz # 1mqkL.t06-thin90.a2m with 10268 sequences, total weight= 22.3221 avg weight= 0.00217395 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mqkL/info/1mqkL.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mqkL/nostruct-align/1mqkL.t06-thin90.a2m.gz, have 129138 columns in 547 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vk1A/nostruct-align/1vk1A.t06-thin90.a2m.gz # 1vk1A.t06-thin90.a2m with 95 sequences, total weight= 95 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10364 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vk1A/info/1vk1A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vk1A/nostruct-align/1vk1A.t06-thin90.a2m.gz, have 129370 columns in 548 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xk7A/nostruct-align/1xk7A.t06-thin90.a2m.gz # 1xk7A.t06-thin90.a2m with 1069 sequences, total weight= 199.422 avg weight= 0.18655 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31561 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xk7A/info/1xk7A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xk7A/nostruct-align/1xk7A.t06-thin90.a2m.gz, have 129777 columns in 549 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2t/2trxA/nostruct-align/2trxA.t06-thin90.a2m.gz # 2trxA.t06-thin90.a2m with 4073 sequences, total weight= 4073 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03247 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2t/2trxA/info/2trxA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/2t/2trxA/nostruct-align/2trxA.t06-thin90.a2m.gz, have 129885 columns in 550 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bjfA/nostruct-align/2bjfA.t06-thin90.a2m.gz # 2bjfA.t06-thin90.a2m with 253 sequences, total weight= 253 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14757 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bjfA/info/2bjfA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/2b/2bjfA/nostruct-align/2bjfA.t06-thin90.a2m.gz, have 130213 columns in 551 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sqgA/nostruct-align/1sqgA.t06-thin90.a2m.gz # 1sqgA.t06-thin90.a2m with 5286 sequences, total weight= 5286 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.890236 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sqgA/info/1sqgA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sqgA/nostruct-align/1sqgA.t06-thin90.a2m.gz, have 130637 columns in 552 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tvgA/nostruct-align/1tvgA.t06-thin90.a2m.gz # 1tvgA.t06-thin90.a2m with 12 sequences, total weight= 7.17245 avg weight= 0.597704 19 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tvgA/info/1tvgA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tvgA/nostruct-align/1tvgA.t06-thin90.a2m.gz, have 130773 columns in 553 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h4xA/nostruct-align/1h4xA.t06-thin90.a2m.gz # 1h4xA.t06-thin90.a2m with 113 sequences, total weight= 113 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16431 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h4xA/info/1h4xA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h4xA/nostruct-align/1h4xA.t06-thin90.a2m.gz, have 130884 columns in 554 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v4pA/nostruct-align/1v4pA.t06-thin90.a2m.gz # 1v4pA.t06-thin90.a2m with 891 sequences, total weight= 159.247 avg weight= 0.178729 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31374 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v4pA/info/1v4pA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v4pA/nostruct-align/1v4pA.t06-thin90.a2m.gz, have 131035 columns in 555 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vclA/nostruct-align/1vclA.t06-thin90.a2m.gz # 1vclA.t06-thin90.a2m with 435 sequences, total weight= 199.121 avg weight= 0.457748 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30053 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vclA/info/1vclA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vclA/nostruct-align/1vclA.t06-thin90.a2m.gz, have 131467 columns in 556 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w1hA/nostruct-align/1w1hA.t06-thin90.a2m.gz # 1w1hA.t06-thin90.a2m with 170 sequences, total weight= 170 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10486 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w1hA/info/1w1hA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w1hA/nostruct-align/1w1hA.t06-thin90.a2m.gz, have 131614 columns in 557 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ihjA/nostruct-align/1ihjA.t06-thin90.a2m.gz # 1ihjA.t06-thin90.a2m with 1671 sequences, total weight= 1671 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24538 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ihjA/info/1ihjA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ihjA/nostruct-align/1ihjA.t06-thin90.a2m.gz, have 131708 columns in 558 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r62A/nostruct-align/1r62A.t06-thin90.a2m.gz # 1r62A.t06-thin90.a2m with 9715 sequences, total weight= 9715 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20091 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r62A/info/1r62A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r62A/nostruct-align/1r62A.t06-thin90.a2m.gz, have 131844 columns in 559 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y0bA/nostruct-align/1y0bA.t06-thin90.a2m.gz # 1y0bA.t06-thin90.a2m with 2234 sequences, total weight= 2234 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03246 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y0bA/info/1y0bA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1y0bA/nostruct-align/1y0bA.t06-thin90.a2m.gz, have 132037 columns in 560 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nofA/nostruct-align/1nofA.t06-thin90.a2m.gz # 1nofA.t06-thin90.a2m with 718 sequences, total weight= 718 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.807317 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nofA/info/1nofA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nofA/nostruct-align/1nofA.t06-thin90.a2m.gz, have 132420 columns in 561 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ykiA/nostruct-align/1ykiA.t06-thin90.a2m.gz # 1ykiA.t06-thin90.a2m with 1285 sequences, total weight= 1285 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.98789 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ykiA/info/1ykiA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1ykiA/nostruct-align/1ykiA.t06-thin90.a2m.gz, have 132636 columns in 562 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g3p/nostruct-align/1g3p.t06-thin90.a2m.gz # 1g3p.t06-thin90.a2m with 1168 sequences, total weight= 131.828 avg weight= 0.112866 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30282 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g3p/info/1g3p.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g3p/nostruct-align/1g3p.t06-thin90.a2m.gz, have 132828 columns in 563 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vdwA/nostruct-align/1vdwA.t06-thin90.a2m.gz # 1vdwA.t06-thin90.a2m with 1291 sequences, total weight= 1291 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1947 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vdwA/info/1vdwA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vdwA/nostruct-align/1vdwA.t06-thin90.a2m.gz, have 133076 columns in 564 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h2cA/nostruct-align/1h2cA.t06-thin90.a2m.gz # 1h2cA.t06-thin90.a2m with 3 sequences, total weight= 2.6571 avg weight= 0.885699 8 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h2cA/info/1h2cA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h2cA/nostruct-align/1h2cA.t06-thin90.a2m.gz, have 133200 columns in 565 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vhuA/nostruct-align/1vhuA.t06-thin90.a2m.gz # 1vhuA.t06-thin90.a2m with 384 sequences, total weight= 384 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1924 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vhuA/info/1vhuA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vhuA/nostruct-align/1vhuA.t06-thin90.a2m.gz, have 133392 columns in 566 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1ju2A/nostruct-align/1ju2A.t06-thin90.a2m.gz # 1ju2A.t06-thin90.a2m with 4595 sequences, total weight= 4595 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.843658 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1ju2A/info/1ju2A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1ju2A/nostruct-align/1ju2A.t06-thin90.a2m.gz, have 133913 columns in 567 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ysqA/nostruct-align/1ysqA.t06-thin90.a2m.gz # 1ysqA.t06-thin90.a2m with 984 sequences, total weight= 984 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13967 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ysqA/info/1ysqA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1ysqA/nostruct-align/1ysqA.t06-thin90.a2m.gz, have 134094 columns in 568 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t9iA/nostruct-align/1t9iA.t06-thin90.a2m.gz # 1t9iA.t06-thin90.a2m with 441 sequences, total weight= 441 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04545 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t9iA/info/1t9iA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t9iA/nostruct-align/1t9iA.t06-thin90.a2m.gz, have 134247 columns in 569 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d2sA/nostruct-align/1d2sA.t06-thin90.a2m.gz # 1d2sA.t06-thin90.a2m with 1328 sequences, total weight= 1328 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.9909 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d2sA/info/1d2sA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d2sA/nostruct-align/1d2sA.t06-thin90.a2m.gz, have 134417 columns in 570 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oh4A/nostruct-align/1oh4A.t06-thin90.a2m.gz # 1oh4A.t06-thin90.a2m with 15 sequences, total weight= 9.69727 avg weight= 0.646484 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oh4A/info/1oh4A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oh4A/nostruct-align/1oh4A.t06-thin90.a2m.gz, have 134591 columns in 571 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ok0A/nostruct-align/1ok0A.t06-thin90.a2m.gz # 1ok0A.t06-thin90.a2m with 8 sequences, total weight= 3.99964 avg weight= 0.499954 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ok0A/info/1ok0A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ok0A/nostruct-align/1ok0A.t06-thin90.a2m.gz, have 134665 columns in 572 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1thfD/nostruct-align/1thfD.t06-thin90.a2m.gz # 1thfD.t06-thin90.a2m with 1064 sequences, total weight= 1064 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1813 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1thfD/info/1thfD.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1thfD/nostruct-align/1thfD.t06-thin90.a2m.gz, have 134918 columns in 573 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/7a/7a3hA/nostruct-align/7a3hA.t06-thin90.a2m.gz # 7a3hA.t06-thin90.a2m with 2657 sequences, total weight= 2657 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.822362 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/7a/7a3hA/info/7a3hA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/7a/7a3hA/nostruct-align/7a3hA.t06-thin90.a2m.gz, have 135218 columns in 574 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ejxC/nostruct-align/1ejxC.t06-thin90.a2m.gz # 1ejxC.t06-thin90.a2m with 3097 sequences, total weight= 3097 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24358 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ejxC/info/1ejxC.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ejxC/nostruct-align/1ejxC.t06-thin90.a2m.gz, have 135774 columns in 575 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tfe/nostruct-align/1tfe.t06-thin90.a2m.gz # 1tfe.t06-thin90.a2m with 537 sequences, total weight= 49.7682 avg weight= 0.0926782 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30071 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tfe/info/1tfe.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tfe/nostruct-align/1tfe.t06-thin90.a2m.gz, have 135916 columns in 576 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f94A/nostruct-align/1f94A.t06-thin90.a2m.gz # 1f94A.t06-thin90.a2m with 2 sequences, total weight= 1.94772 avg weight= 0.973858 6 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f94A/info/1f94A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f94A/nostruct-align/1f94A.t06-thin90.a2m.gz, have 135979 columns in 577 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kr4A/nostruct-align/1kr4A.t06-thin90.a2m.gz # 1kr4A.t06-thin90.a2m with 189 sequences, total weight= 28.753 avg weight= 0.152132 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kr4A/info/1kr4A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kr4A/nostruct-align/1kr4A.t06-thin90.a2m.gz, have 136089 columns in 578 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ryoA/nostruct-align/1ryoA.t06-thin90.a2m.gz # 1ryoA.t06-thin90.a2m with 288 sequences, total weight= 102.545 avg weight= 0.356058 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30159 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ryoA/info/1ryoA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1ryoA/nostruct-align/1ryoA.t06-thin90.a2m.gz, have 136413 columns in 579 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bu8A/nostruct-align/1bu8A.t06-thin90.a2m.gz # 1bu8A.t06-thin90.a2m with 6715 sequences, total weight= 6715 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04111 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bu8A/info/1bu8A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bu8A/nostruct-align/1bu8A.t06-thin90.a2m.gz, have 136859 columns in 580 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rw1A/nostruct-align/1rw1A.t06-thin90.a2m.gz # 1rw1A.t06-thin90.a2m with 525 sequences, total weight= 81.917 avg weight= 0.156032 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30433 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rw1A/info/1rw1A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rw1A/nostruct-align/1rw1A.t06-thin90.a2m.gz, have 136973 columns in 581 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y4wA/nostruct-align/1y4wA.t06-thin90.a2m.gz # 1y4wA.t06-thin90.a2m with 483 sequences, total weight= 483 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19356 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y4wA/info/1y4wA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1y4wA/nostruct-align/1y4wA.t06-thin90.a2m.gz, have 137490 columns in 582 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j24A/nostruct-align/1j24A.t06-thin90.a2m.gz # 1j24A.t06-thin90.a2m with 146 sequences, total weight= 88.4917 avg weight= 0.606108 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30118 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j24A/info/1j24A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j24A/nostruct-align/1j24A.t06-thin90.a2m.gz, have 137623 columns in 583 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hxhA/nostruct-align/1hxhA.t06-thin90.a2m.gz # 1hxhA.t06-thin90.a2m with 12225 sequences, total weight= 12225 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16474 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hxhA/info/1hxhA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hxhA/nostruct-align/1hxhA.t06-thin90.a2m.gz, have 137876 columns in 584 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f32A/nostruct-align/1f32A.t06-thin90.a2m.gz # 1f32A.t06-thin90.a2m with 15 sequences, total weight= 8.43676 avg weight= 0.56245 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f32A/info/1f32A.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f32A/nostruct-align/1f32A.t06-thin90.a2m.gz, have 138003 columns in 585 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jhgA/nostruct-align/1jhgA.t06-thin90.a2m.gz # 1jhgA.t06-thin90.a2m with 68 sequences, total weight= 23.6715 avg weight= 0.348111 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jhgA/info/1jhgA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jhgA/nostruct-align/1jhgA.t06-thin90.a2m.gz, have 138104 columns in 586 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r0uA/nostruct-align/1r0uA.t06-thin90.a2m.gz # 1r0uA.t06-thin90.a2m with 53 sequences, total weight= 53 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26162 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r0uA/info/1r0uA.stride-mixed.str2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r0uA/nostruct-align/1r0uA.t06-thin90.a2m.gz, have 138246 columns in 587 chains # command:CPU_time= 4556.38 sec, elapsed time= 4590.61 sec) # command:# ReportTestByChain quality-reports/dunbrack-30pc-1763-t06-thin90-IDGaaH13-3-13-7-13-9-13-11-tr12-str2-by-chain.test ok. # command:# Testing net dunbrack-30pc-1763-t06-thin90-IDGaaH13-3-13-7-13-9-13-11-tr12-str2-from-empty.net # Initializing Gain for str2 # Initializing Gain for third_layer # Initializing Gain for second_layer # Initializing Gain for FirstLayer # Network initialization done # command:CPU_time= 4605.61 sec, elapsed time= 4639.88 sec) # command: