# command:# Prefix for input files set to # command:# Prefix for output files set to # command:# Seed set to 1145578042 # command:# Read 6 alphabets and 0 BackgroundProbs from /projects/compbio/lib/alphabet/hbonds.alphabet # command:Unrecognized 1th alphabet way-back-11 for BackgroundProbs that has no name Unrecognized 1th alphabet near-backbone-11 for BackgroundProbs that has no name Unrecognized 1th alphabet rel_sa10 for BackgroundProbs that has no name Unrecognized 1th alphabet CB_burial_12_7 for BackgroundProbs that has no name Unrecognized 1th alphabet CB_burial_14_7 for BackgroundProbs that has no name Unrecognized 1th alphabet abs_sa7 for BackgroundProbs that has no name Unrecognized 1th alphabet alpha11 for BackgroundProbs that has no name Unrecognized 1th alphabet Bystroff for BackgroundProbs that has no name Unrecognized 1th alphabet chi1_3 for BackgroundProbs that has no name Unrecognized 1th alphabet dry_burial_6.5_7 for BackgroundProbs that has no name Unrecognized 1th alphabet dry_burial_8_7 for BackgroundProbs that has no name Unrecognized 1th alphabet dry_burial_12_7 for BackgroundProbs that has no name Unrecognized 1th alphabet DSSP for BackgroundProbs that has no name Unrecognized 1th alphabet EBGHSTL for BackgroundProbs that has no name Unrecognized 1th alphabet str for BackgroundProbs that has no name Unrecognized 1th alphabet str2 for BackgroundProbs that has no name Unrecognized 1th alphabet dssp_ehl2 for BackgroundProbs that has no name Unrecognized 1th alphabet STRIDE for BackgroundProbs that has no name Unrecognized 1th alphabet EBGHTL for BackgroundProbs that has no name Unrecognized 1th alphabet stride_ehl2 for BackgroundProbs that has no name Unrecognized 1th alphabet tco for BackgroundProbs that has no name Unrecognized 1th alphabet wet_burial_6.5_7 for BackgroundProbs that has no name Unrecognized 1th alphabet pb for BackgroundProbs that has no name Unrecognized 1th alphabet gamma_2 for BackgroundProbs that has no name # Read 0 alphabets and 7 BackgroundProbs from /projects/compbio/lib/alphabet/dunbrack-in-scop.backgrounds # command:# Neural network set to IDGaaH13-3-13-5-13-7-13-9-o_notor2-empty.net # command:# Neural network set to dunbrack-30pc-1763-t05-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-o_notor2-from-empty.net # command:# Learning params read from /cse/faculty/karplus/dna/predict-2nd/testing/params/7-jul-05.params # command:# Initializing Weights for o_notor2 # Initializing Bias for o_notor2 # Initializing Gain for o_notor2 # Initializing Weights for third_layer # Initializing Bias for third_layer # Initializing Gain for third_layer # Initializing Weights for second_layer # Initializing Bias for second_layer # Initializing Gain for second_layer # Initializing Weights for FirstLayer # Initializing Bias for FirstLayer # Initializing Gain for FirstLayer # Network initialization done # command:CPU_time= 0.020997 sec, elapsed time= 0.032767 sec) # command:# command:# Prefix for input files set to /cse/faculty/karplus/dna/predict-2nd/testing/training-data/ # command:# reading script from file dunbrack-30pc-1763-2.t05-thin90-o_notor2 # Prefix for input files set to # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1umkA/nostruct-align/1umkA.t05-thin90.a2m.gz # 1umkA.t05-thin90.a2m with 1953 sequences, total weight= 1953 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.989999 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1umkA/info/1umkA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1umkA/nostruct-align/1umkA.t05-thin90.a2m.gz, have 271 columns in 1 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gmuA/nostruct-align/1gmuA.t05-thin90.a2m.gz # 1gmuA.t05-thin90.a2m with 91 sequences, total weight= 47.7919 avg weight= 0.525186 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gmuA/info/1gmuA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gmuA/nostruct-align/1gmuA.t05-thin90.a2m.gz, have 409 columns in 2 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1aohA/nostruct-align/1aohA.t05-thin90.a2m.gz # 1aohA.t05-thin90.a2m with 50 sequences, total weight= 13.6892 avg weight= 0.273785 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1aohA/info/1aohA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1aohA/nostruct-align/1aohA.t05-thin90.a2m.gz, have 552 columns in 3 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s0aA/nostruct-align/1s0aA.t05-thin90.a2m.gz # 1s0aA.t05-thin90.a2m with 4395 sequences, total weight= 4395 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.953208 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s0aA/info/1s0aA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s0aA/nostruct-align/1s0aA.t05-thin90.a2m.gz, have 980 columns in 4 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g6gA/nostruct-align/1g6gA.t05-thin90.a2m.gz # 1g6gA.t05-thin90.a2m with 819 sequences, total weight= 819 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.979376 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g6gA/info/1g6gA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g6gA/nostruct-align/1g6gA.t05-thin90.a2m.gz, have 1107 columns in 5 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1din/nostruct-align/1din.t05-thin90.a2m.gz # 1din.t05-thin90.a2m with 9471 sequences, total weight= 9471 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.740607 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1din/info/1din.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1din/nostruct-align/1din.t05-thin90.a2m.gz, have 1340 columns in 6 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jkeA/nostruct-align/1jkeA.t05-thin90.a2m.gz # 1jkeA.t05-thin90.a2m with 203 sequences, total weight= 12.8712 avg weight= 0.0634049 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jkeA/info/1jkeA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jkeA/nostruct-align/1jkeA.t05-thin90.a2m.gz, have 1485 columns in 7 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tuvA/nostruct-align/1tuvA.t05-thin90.a2m.gz # 1tuvA.t05-thin90.a2m with 267 sequences, total weight= 267 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15947 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tuvA/info/1tuvA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tuvA/nostruct-align/1tuvA.t05-thin90.a2m.gz, have 1588 columns in 8 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1ls9A/nostruct-align/1ls9A.t05-thin90.a2m.gz # 1ls9A.t05-thin90.a2m with 1243 sequences, total weight= 1243 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10171 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1ls9A/info/1ls9A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1ls9A/nostruct-align/1ls9A.t05-thin90.a2m.gz, have 1679 columns in 9 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gyvA/nostruct-align/1gyvA.t05-thin90.a2m.gz # 1gyvA.t05-thin90.a2m with 72 sequences, total weight= 39.4304 avg weight= 0.547645 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gyvA/info/1gyvA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gyvA/nostruct-align/1gyvA.t05-thin90.a2m.gz, have 1799 columns in 10 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1ccwA/nostruct-align/1ccwA.t05-thin90.a2m.gz # 1ccwA.t05-thin90.a2m with 349 sequences, total weight= 61.8369 avg weight= 0.177183 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30106 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1ccwA/info/1ccwA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1ccwA/nostruct-align/1ccwA.t05-thin90.a2m.gz, have 1936 columns in 11 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iujA/nostruct-align/1iujA.t05-thin90.a2m.gz # 1iujA.t05-thin90.a2m with 344 sequences, total weight= 344 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00356 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iujA/info/1iujA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iujA/nostruct-align/1iujA.t05-thin90.a2m.gz, have 2038 columns in 12 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y8aA/nostruct-align/1y8aA.t05-thin90.a2m.gz # 1y8aA.t05-thin90.a2m with 402 sequences, total weight= 64.3 avg weight= 0.15995 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y8aA/info/1y8aA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1y8aA/nostruct-align/1y8aA.t05-thin90.a2m.gz, have 2351 columns in 13 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1ako/nostruct-align/1ako.t05-thin90.a2m.gz # 1ako.t05-thin90.a2m with 1630 sequences, total weight= 1630 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.867332 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1ako/info/1ako.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1ako/nostruct-align/1ako.t05-thin90.a2m.gz, have 2619 columns in 14 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nh0A/nostruct-align/1nh0A.t05-thin90.a2m.gz # 1nh0A.t05-thin90.a2m with 989 sequences, total weight= 3.00252 avg weight= 0.00303591 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nh0A/info/1nh0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nh0A/nostruct-align/1nh0A.t05-thin90.a2m.gz, have 2718 columns in 15 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dlwA/nostruct-align/1dlwA.t05-thin90.a2m.gz # 1dlwA.t05-thin90.a2m with 147 sequences, total weight= 73.3552 avg weight= 0.499015 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3009 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dlwA/info/1dlwA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dlwA/nostruct-align/1dlwA.t05-thin90.a2m.gz, have 2834 columns in 16 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o7sA/nostruct-align/1o7sA.t05-thin90.a2m.gz # 1o7sA.t05-thin90.a2m with 11660 sequences, total weight= 66.7944 avg weight= 0.00572851 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30475 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o7sA/info/1o7sA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o7sA/nostruct-align/1o7sA.t05-thin90.a2m.gz, have 2946 columns in 17 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ixh/nostruct-align/1ixh.t05-thin90.a2m.gz # 1ixh.t05-thin90.a2m with 458 sequences, total weight= 458 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19945 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ixh/info/1ixh.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ixh/nostruct-align/1ixh.t05-thin90.a2m.gz, have 3267 columns in 18 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uuzA/nostruct-align/1uuzA.t05-thin90.a2m.gz # 1uuzA.t05-thin90.a2m with 16 sequences, total weight= 9.76028 avg weight= 0.610018 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uuzA/info/1uuzA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uuzA/nostruct-align/1uuzA.t05-thin90.a2m.gz, have 3396 columns in 19 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kwfA/nostruct-align/1kwfA.t05-thin90.a2m.gz # 1kwfA.t05-thin90.a2m with 75 sequences, total weight= 75 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15993 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kwfA/info/1kwfA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kwfA/nostruct-align/1kwfA.t05-thin90.a2m.gz, have 3759 columns in 20 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pdo/nostruct-align/1pdo.t05-thin90.a2m.gz # 1pdo.t05-thin90.a2m with 199 sequences, total weight= 119.758 avg weight= 0.6018 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30263 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pdo/info/1pdo.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pdo/nostruct-align/1pdo.t05-thin90.a2m.gz, have 3888 columns in 21 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j98A/nostruct-align/1j98A.t05-thin90.a2m.gz # 1j98A.t05-thin90.a2m with 74 sequences, total weight= 7.00744 avg weight= 0.0946952 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j98A/info/1j98A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j98A/nostruct-align/1j98A.t05-thin90.a2m.gz, have 4042 columns in 22 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jidA/nostruct-align/1jidA.t05-thin90.a2m.gz # 1jidA.t05-thin90.a2m with 65 sequences, total weight= 35.9429 avg weight= 0.552968 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jidA/info/1jidA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jidA/nostruct-align/1jidA.t05-thin90.a2m.gz, have 4156 columns in 23 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l2hA/nostruct-align/1l2hA.t05-thin90.a2m.gz # 1l2hA.t05-thin90.a2m with 113 sequences, total weight= 46.3337 avg weight= 0.410033 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l2hA/info/1l2hA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1l2hA/nostruct-align/1l2hA.t05-thin90.a2m.gz, have 4300 columns in 24 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kv7A/nostruct-align/1kv7A.t05-thin90.a2m.gz # 1kv7A.t05-thin90.a2m with 868 sequences, total weight= 868 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10639 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kv7A/info/1kv7A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kv7A/nostruct-align/1kv7A.t05-thin90.a2m.gz, have 4763 columns in 25 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1ft5A/nostruct-align/1ft5A.t05-thin90.a2m.gz # 1ft5A.t05-thin90.a2m with 562 sequences, total weight= 562 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.82964 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1ft5A/info/1ft5A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1ft5A/nostruct-align/1ft5A.t05-thin90.a2m.gz, have 4974 columns in 26 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ytlA/nostruct-align/1ytlA.t05-thin90.a2m.gz # 1ytlA.t05-thin90.a2m with 15 sequences, total weight= 7.5009 avg weight= 0.50006 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ytlA/info/1ytlA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1ytlA/nostruct-align/1ytlA.t05-thin90.a2m.gz, have 5132 columns in 27 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ro7A/nostruct-align/1ro7A.t05-thin90.a2m.gz # 1ro7A.t05-thin90.a2m with 8 sequences, total weight= 4.02958 avg weight= 0.503698 13 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ro7A/info/1ro7A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1ro7A/nostruct-align/1ro7A.t05-thin90.a2m.gz, have 5390 columns in 28 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/4f/4fiv/nostruct-align/4fiv.t05-thin90.a2m.gz # 4fiv.t05-thin90.a2m with 762 sequences, total weight= 4.61816 avg weight= 0.00606058 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/4f/4fiv/info/4fiv.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/4f/4fiv/nostruct-align/4fiv.t05-thin90.a2m.gz, have 5503 columns in 29 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lj8A/nostruct-align/1lj8A.t05-thin90.a2m.gz # 1lj8A.t05-thin90.a2m with 181 sequences, total weight= 76.7135 avg weight= 0.423832 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30049 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lj8A/info/1lj8A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lj8A/nostruct-align/1lj8A.t05-thin90.a2m.gz, have 5995 columns in 30 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1z2nX/nostruct-align/1z2nX.t05-thin90.a2m.gz # 1z2nX.t05-thin90.a2m with 2822 sequences, total weight= 2822 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.949828 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1z2nX/info/1z2nX.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1z/1z2nX/nostruct-align/1z2nX.t05-thin90.a2m.gz, have 6306 columns in 31 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qgvA/nostruct-align/1qgvA.t05-thin90.a2m.gz # 1qgvA.t05-thin90.a2m with 44 sequences, total weight= 9.69415 avg weight= 0.220322 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qgvA/info/1qgvA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qgvA/nostruct-align/1qgvA.t05-thin90.a2m.gz, have 6436 columns in 32 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o6vA/nostruct-align/1o6vA.t05-thin90.a2m.gz # 1o6vA.t05-thin90.a2m with 6929 sequences, total weight= 6929 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.928241 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o6vA/info/1o6vA.stride-mixed.o_notor2 WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1o/1o6vA/nostruct-align/1o6vA.t05-thin90.a2m.gz, have 6898 columns in 33 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h6hA/nostruct-align/1h6hA.t05-thin90.a2m.gz # 1h6hA.t05-thin90.a2m with 321 sequences, total weight= 321 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0919 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h6hA/info/1h6hA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h6hA/nostruct-align/1h6hA.t05-thin90.a2m.gz, have 7041 columns in 34 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ugxA/nostruct-align/1ugxA.t05-thin90.a2m.gz # 1ugxA.t05-thin90.a2m with 229 sequences, total weight= 62.1202 avg weight= 0.271267 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30075 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ugxA/info/1ugxA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ugxA/nostruct-align/1ugxA.t05-thin90.a2m.gz, have 7174 columns in 35 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fx2A/nostruct-align/1fx2A.t05-thin90.a2m.gz # 1fx2A.t05-thin90.a2m with 970 sequences, total weight= 970 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07645 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fx2A/info/1fx2A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fx2A/nostruct-align/1fx2A.t05-thin90.a2m.gz, have 7409 columns in 36 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gx3A/nostruct-align/1gx3A.t05-thin90.a2m.gz # 1gx3A.t05-thin90.a2m with 115 sequences, total weight= 115 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22312 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gx3A/info/1gx3A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gx3A/nostruct-align/1gx3A.t05-thin90.a2m.gz, have 7685 columns in 37 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jhjA/nostruct-align/1jhjA.t05-thin90.a2m.gz # 1jhjA.t05-thin90.a2m with 74 sequences, total weight= 36.763 avg weight= 0.496798 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jhjA/info/1jhjA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jhjA/nostruct-align/1jhjA.t05-thin90.a2m.gz, have 7846 columns in 38 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kwgA/nostruct-align/1kwgA.t05-thin90.a2m.gz # 1kwgA.t05-thin90.a2m with 530 sequences, total weight= 530 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02153 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kwgA/info/1kwgA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kwgA/nostruct-align/1kwgA.t05-thin90.a2m.gz, have 8490 columns in 39 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uf5A/nostruct-align/1uf5A.t05-thin90.a2m.gz # 1uf5A.t05-thin90.a2m with 1175 sequences, total weight= 1175 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07228 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uf5A/info/1uf5A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uf5A/nostruct-align/1uf5A.t05-thin90.a2m.gz, have 8793 columns in 40 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1z0pA/nostruct-align/1z0pA.t05-thin90.a2m.gz # 1z0pA.t05-thin90.a2m with 7 sequences, total weight= 2.86623 avg weight= 0.409461 10 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1z0pA/info/1z0pA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1z/1z0pA/nostruct-align/1z0pA.t05-thin90.a2m.gz, have 8866 columns in 41 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p6oA/nostruct-align/1p6oA.t05-thin90.a2m.gz # 1p6oA.t05-thin90.a2m with 988 sequences, total weight= 988 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17151 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p6oA/info/1p6oA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p6oA/nostruct-align/1p6oA.t05-thin90.a2m.gz, have 9022 columns in 42 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dowA/nostruct-align/1dowA.t05-thin90.a2m.gz # 1dowA.t05-thin90.a2m with 56 sequences, total weight= 18.3134 avg weight= 0.327026 31 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dowA/info/1dowA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dowA/nostruct-align/1dowA.t05-thin90.a2m.gz, have 9227 columns in 43 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vprA/nostruct-align/1vprA.t05-thin90.a2m.gz # 1vprA.t05-thin90.a2m with 13 sequences, total weight= 2.39252 avg weight= 0.18404 11 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vprA/info/1vprA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vprA/nostruct-align/1vprA.t05-thin90.a2m.gz, have 9578 columns in 44 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vpdA/nostruct-align/1vpdA.t05-thin90.a2m.gz # 1vpdA.t05-thin90.a2m with 4482 sequences, total weight= 4482 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.866088 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vpdA/info/1vpdA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vpdA/nostruct-align/1vpdA.t05-thin90.a2m.gz, have 9872 columns in 45 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qf8A/nostruct-align/1qf8A.t05-thin90.a2m.gz # 1qf8A.t05-thin90.a2m with 70 sequences, total weight= 11.6318 avg weight= 0.166169 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qf8A/info/1qf8A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qf8A/nostruct-align/1qf8A.t05-thin90.a2m.gz, have 10039 columns in 46 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i4uA/nostruct-align/1i4uA.t05-thin90.a2m.gz # 1i4uA.t05-thin90.a2m with 521 sequences, total weight= 521 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.955453 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i4uA/info/1i4uA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i4uA/nostruct-align/1i4uA.t05-thin90.a2m.gz, have 10220 columns in 47 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xjvA/nostruct-align/1xjvA.t05-thin90.a2m.gz # 1xjvA.t05-thin90.a2m with 58 sequences, total weight= 58 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00831 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xjvA/info/1xjvA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xjvA/nostruct-align/1xjvA.t05-thin90.a2m.gz, have 10511 columns in 48 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ytvA/nostruct-align/1ytvA.t05-thin90.a2m.gz # 1ytvA.t05-thin90.a2m with 1814 sequences, total weight= 1814 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.862339 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ytvA/info/1ytvA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1ytvA/nostruct-align/1ytvA.t05-thin90.a2m.gz, have 10877 columns in 49 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m0wA/nostruct-align/1m0wA.t05-thin90.a2m.gz # 1m0wA.t05-thin90.a2m with 79 sequences, total weight= 21.9189 avg weight= 0.277454 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m0wA/info/1m0wA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m0wA/nostruct-align/1m0wA.t05-thin90.a2m.gz, have 11358 columns in 50 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/4u/4uagA/nostruct-align/4uagA.t05-thin90.a2m.gz # 4uagA.t05-thin90.a2m with 1527 sequences, total weight= 1527 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11548 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/4u/4uagA/info/4uagA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/4u/4uagA/nostruct-align/4uagA.t05-thin90.a2m.gz, have 11787 columns in 51 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vpbA/nostruct-align/1vpbA.t05-thin90.a2m.gz # 1vpbA.t05-thin90.a2m with 406 sequences, total weight= 406 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20935 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vpbA/info/1vpbA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vpbA/nostruct-align/1vpbA.t05-thin90.a2m.gz, have 12224 columns in 52 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l9xA/nostruct-align/1l9xA.t05-thin90.a2m.gz # 1l9xA.t05-thin90.a2m with 2518 sequences, total weight= 2518 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06802 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l9xA/info/1l9xA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1l9xA/nostruct-align/1l9xA.t05-thin90.a2m.gz, have 12512 columns in 53 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rb9/nostruct-align/1rb9.t05-thin90.a2m.gz # 1rb9.t05-thin90.a2m with 198 sequences, total weight= 10.5129 avg weight= 0.0530955 42 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rb9/info/1rb9.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rb9/nostruct-align/1rb9.t05-thin90.a2m.gz, have 12564 columns in 54 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n71A/nostruct-align/1n71A.t05-thin90.a2m.gz # 1n71A.t05-thin90.a2m with 5032 sequences, total weight= 5032 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.870693 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n71A/info/1n71A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n71A/nostruct-align/1n71A.t05-thin90.a2m.gz, have 12744 columns in 55 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t7rA/nostruct-align/1t7rA.t05-thin90.a2m.gz # 1t7rA.t05-thin90.a2m with 951 sequences, total weight= 951 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.975719 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t7rA/info/1t7rA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t7rA/nostruct-align/1t7rA.t05-thin90.a2m.gz, have 12994 columns in 56 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pj5A/nostruct-align/1pj5A.t05-thin90.a2m.gz # 1pj5A.t05-thin90.a2m with 7733 sequences, total weight= 7733 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.955906 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pj5A/info/1pj5A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pj5A/nostruct-align/1pj5A.t05-thin90.a2m.gz, have 13821 columns in 57 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vdkA/nostruct-align/1vdkA.t05-thin90.a2m.gz # 1vdkA.t05-thin90.a2m with 957 sequences, total weight= 255.682 avg weight= 0.267171 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31407 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vdkA/info/1vdkA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vdkA/nostruct-align/1vdkA.t05-thin90.a2m.gz, have 14279 columns in 58 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2s/2sli/nostruct-align/2sli.t05-thin90.a2m.gz # 2sli.t05-thin90.a2m with 1087 sequences, total weight= 1087 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18884 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2s/2sli/info/2sli.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2s/2sli/nostruct-align/2sli.t05-thin90.a2m.gz, have 14958 columns in 59 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qs1A/nostruct-align/1qs1A.t05-thin90.a2m.gz # 1qs1A.t05-thin90.a2m with 126 sequences, total weight= 126 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10056 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qs1A/info/1qs1A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qs1A/nostruct-align/1qs1A.t05-thin90.a2m.gz, have 15360 columns in 60 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h4gA/nostruct-align/1h4gA.t05-thin90.a2m.gz # 1h4gA.t05-thin90.a2m with 133 sequences, total weight= 12.6193 avg weight= 0.0948816 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h4gA/info/1h4gA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h4gA/nostruct-align/1h4gA.t05-thin90.a2m.gz, have 15566 columns in 61 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v8cA/nostruct-align/1v8cA.t05-thin90.a2m.gz # 1v8cA.t05-thin90.a2m with 263 sequences, total weight= 109.585 avg weight= 0.416674 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v8cA/info/1v8cA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v8cA/nostruct-align/1v8cA.t05-thin90.a2m.gz, have 15731 columns in 62 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mk4A/nostruct-align/1mk4A.t05-thin90.a2m.gz # 1mk4A.t05-thin90.a2m with 6021 sequences, total weight= 6021 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.765443 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mk4A/info/1mk4A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mk4A/nostruct-align/1mk4A.t05-thin90.a2m.gz, have 15888 columns in 63 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nh8A/nostruct-align/1nh8A.t05-thin90.a2m.gz # 1nh8A.t05-thin90.a2m with 206 sequences, total weight= 36.1433 avg weight= 0.175453 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nh8A/info/1nh8A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nh8A/nostruct-align/1nh8A.t05-thin90.a2m.gz, have 16164 columns in 64 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vkpA/nostruct-align/1vkpA.t05-thin90.a2m.gz # 1vkpA.t05-thin90.a2m with 111 sequences, total weight= 37.9995 avg weight= 0.342338 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vkpA/info/1vkpA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vkpA/nostruct-align/1vkpA.t05-thin90.a2m.gz, have 16529 columns in 65 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2s/2spcA/nostruct-align/2spcA.t05-thin90.a2m.gz # 2spcA.t05-thin90.a2m with 1129 sequences, total weight= 1129 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0829 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2s/2spcA/info/2spcA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2s/2spcA/nostruct-align/2spcA.t05-thin90.a2m.gz, have 16636 columns in 66 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yb3A/nostruct-align/1yb3A.t05-thin90.a2m.gz # 1yb3A.t05-thin90.a2m with 5 sequences, total weight= 4.04753 avg weight= 0.809506 13 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yb3A/info/1yb3A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1yb3A/nostruct-align/1yb3A.t05-thin90.a2m.gz, have 16802 columns in 67 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mgtA/nostruct-align/1mgtA.t05-thin90.a2m.gz # 1mgtA.t05-thin90.a2m with 469 sequences, total weight= 469 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28042 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mgtA/info/1mgtA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mgtA/nostruct-align/1mgtA.t05-thin90.a2m.gz, have 16971 columns in 68 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rutX/nostruct-align/1rutX.t05-thin90.a2m.gz # 1rutX.t05-thin90.a2m with 964 sequences, total weight= 964 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25575 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rutX/info/1rutX.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rutX/nostruct-align/1rutX.t05-thin90.a2m.gz, have 17128 columns in 69 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1ht6A/nostruct-align/1ht6A.t05-thin90.a2m.gz # 1ht6A.t05-thin90.a2m with 1863 sequences, total weight= 1863 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02037 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1ht6A/info/1ht6A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1ht6A/nostruct-align/1ht6A.t05-thin90.a2m.gz, have 17532 columns in 70 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ok7A/nostruct-align/1ok7A.t05-thin90.a2m.gz # 1ok7A.t05-thin90.a2m with 297 sequences, total weight= 127.993 avg weight= 0.430954 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30401 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ok7A/info/1ok7A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ok7A/nostruct-align/1ok7A.t05-thin90.a2m.gz, have 17898 columns in 71 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1czpA/nostruct-align/1czpA.t05-thin90.a2m.gz # 1czpA.t05-thin90.a2m with 907 sequences, total weight= 907 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27869 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1czpA/info/1czpA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1czpA/nostruct-align/1czpA.t05-thin90.a2m.gz, have 17996 columns in 72 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ojhA/nostruct-align/1ojhA.t05-thin90.a2m.gz # 1ojhA.t05-thin90.a2m with 4 sequences, total weight= 3.05605 avg weight= 0.764012 8 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ojhA/info/1ojhA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ojhA/nostruct-align/1ojhA.t05-thin90.a2m.gz, have 18048 columns in 73 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1me4A/nostruct-align/1me4A.t05-thin90.a2m.gz # 1me4A.t05-thin90.a2m with 1277 sequences, total weight= 284.851 avg weight= 0.223063 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32027 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1me4A/info/1me4A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1me4A/nostruct-align/1me4A.t05-thin90.a2m.gz, have 18263 columns in 74 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g6xA/nostruct-align/1g6xA.t05-thin90.a2m.gz # 1g6xA.t05-thin90.a2m with 634 sequences, total weight= 66.3137 avg weight= 0.104596 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30493 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g6xA/info/1g6xA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g6xA/nostruct-align/1g6xA.t05-thin90.a2m.gz, have 18321 columns in 75 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x99A/nostruct-align/1x99A.t05-thin90.a2m.gz # 1x99A.t05-thin90.a2m with 12 sequences, total weight= 5.74644 avg weight= 0.47887 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x99A/info/1x99A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1x99A/nostruct-align/1x99A.t05-thin90.a2m.gz, have 18466 columns in 76 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ogiA/nostruct-align/1ogiA.t05-thin90.a2m.gz # 1ogiA.t05-thin90.a2m with 1873 sequences, total weight= 1873 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.978345 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ogiA/info/1ogiA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ogiA/nostruct-align/1ogiA.t05-thin90.a2m.gz, have 18761 columns in 77 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jiwI/nostruct-align/1jiwI.t05-thin90.a2m.gz # 1jiwI.t05-thin90.a2m with 22 sequences, total weight= 9.18597 avg weight= 0.417544 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jiwI/info/1jiwI.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jiwI/nostruct-align/1jiwI.t05-thin90.a2m.gz, have 18866 columns in 78 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pe1A/nostruct-align/1pe1A.t05-thin90.a2m.gz # 1pe1A.t05-thin90.a2m with 445 sequences, total weight= 38.8749 avg weight= 0.0873594 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pe1A/info/1pe1A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pe1A/nostruct-align/1pe1A.t05-thin90.a2m.gz, have 19124 columns in 79 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mf7A/nostruct-align/1mf7A.t05-thin90.a2m.gz # 1mf7A.t05-thin90.a2m with 1710 sequences, total weight= 1710 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.982266 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mf7A/info/1mf7A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mf7A/nostruct-align/1mf7A.t05-thin90.a2m.gz, have 19318 columns in 80 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pyoB/nostruct-align/1pyoB.t05-thin90.a2m.gz # 1pyoB.t05-thin90.a2m with 108 sequences, total weight= 25.5928 avg weight= 0.23697 43 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pyoB/info/1pyoB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pyoB/nostruct-align/1pyoB.t05-thin90.a2m.gz, have 19416 columns in 81 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tl9A/nostruct-align/1tl9A.t05-thin90.a2m.gz # 1tl9A.t05-thin90.a2m with 314 sequences, total weight= 314 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23891 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tl9A/info/1tl9A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tl9A/nostruct-align/1tl9A.t05-thin90.a2m.gz, have 19737 columns in 82 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ob8A/nostruct-align/1ob8A.t05-thin90.a2m.gz # 1ob8A.t05-thin90.a2m with 25 sequences, total weight= 17.1319 avg weight= 0.685274 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ob8A/info/1ob8A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ob8A/nostruct-align/1ob8A.t05-thin90.a2m.gz, have 19856 columns in 83 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hxrA/nostruct-align/1hxrA.t05-thin90.a2m.gz # 1hxrA.t05-thin90.a2m with 24 sequences, total weight= 12.1453 avg weight= 0.506053 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hxrA/info/1hxrA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hxrA/nostruct-align/1hxrA.t05-thin90.a2m.gz, have 19963 columns in 84 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g61A/nostruct-align/1g61A.t05-thin90.a2m.gz # 1g61A.t05-thin90.a2m with 63 sequences, total weight= 11.978 avg weight= 0.190127 31 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g61A/info/1g61A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g61A/nostruct-align/1g61A.t05-thin90.a2m.gz, have 20188 columns in 85 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1snrA/nostruct-align/1snrA.t05-thin90.a2m.gz # 1snrA.t05-thin90.a2m with 1287 sequences, total weight= 1287 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05301 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1snrA/info/1snrA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1snrA/nostruct-align/1snrA.t05-thin90.a2m.gz, have 20524 columns in 86 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vc4A/nostruct-align/1vc4A.t05-thin90.a2m.gz # 1vc4A.t05-thin90.a2m with 695 sequences, total weight= 695 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19436 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vc4A/info/1vc4A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vc4A/nostruct-align/1vc4A.t05-thin90.a2m.gz, have 20778 columns in 87 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oxdA/nostruct-align/1oxdA.t05-thin90.a2m.gz # 1oxdA.t05-thin90.a2m with 80 sequences, total weight= 17.374 avg weight= 0.217175 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oxdA/info/1oxdA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oxdA/nostruct-align/1oxdA.t05-thin90.a2m.gz, have 21004 columns in 88 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1co6A/nostruct-align/1co6A.t05-thin90.a2m.gz # 1co6A.t05-thin90.a2m with 269 sequences, total weight= 30.9325 avg weight= 0.114991 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1co6A/info/1co6A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1co6A/nostruct-align/1co6A.t05-thin90.a2m.gz, have 21111 columns in 89 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1ftrA/nostruct-align/1ftrA.t05-thin90.a2m.gz # 1ftrA.t05-thin90.a2m with 80 sequences, total weight= 6.04857 avg weight= 0.0756071 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1ftrA/info/1ftrA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1ftrA/nostruct-align/1ftrA.t05-thin90.a2m.gz, have 21407 columns in 90 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sjwA/nostruct-align/1sjwA.t05-thin90.a2m.gz # 1sjwA.t05-thin90.a2m with 462 sequences, total weight= 462 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.949832 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sjwA/info/1sjwA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sjwA/nostruct-align/1sjwA.t05-thin90.a2m.gz, have 21549 columns in 91 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pbjA/nostruct-align/1pbjA.t05-thin90.a2m.gz # 1pbjA.t05-thin90.a2m with 2471 sequences, total weight= 2471 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10657 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pbjA/info/1pbjA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pbjA/nostruct-align/1pbjA.t05-thin90.a2m.gz, have 21669 columns in 92 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g8mA/nostruct-align/1g8mA.t05-thin90.a2m.gz # 1g8mA.t05-thin90.a2m with 271 sequences, total weight= 14.6072 avg weight= 0.0539011 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g8mA/info/1g8mA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g8mA/nostruct-align/1g8mA.t05-thin90.a2m.gz, have 22259 columns in 93 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vr5A/nostruct-align/1vr5A.t05-thin90.a2m.gz # 1vr5A.t05-thin90.a2m with 1454 sequences, total weight= 1454 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03715 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vr5A/info/1vr5A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vr5A/nostruct-align/1vr5A.t05-thin90.a2m.gz, have 22795 columns in 94 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vm9A/nostruct-align/1vm9A.t05-thin90.a2m.gz # 1vm9A.t05-thin90.a2m with 1248 sequences, total weight= 1248 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13399 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vm9A/info/1vm9A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vm9A/nostruct-align/1vm9A.t05-thin90.a2m.gz, have 22904 columns in 95 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uscA/nostruct-align/1uscA.t05-thin90.a2m.gz # 1uscA.t05-thin90.a2m with 542 sequences, total weight= 542 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1671 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uscA/info/1uscA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uscA/nostruct-align/1uscA.t05-thin90.a2m.gz, have 23082 columns in 96 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jy1A/nostruct-align/1jy1A.t05-thin90.a2m.gz # 1jy1A.t05-thin90.a2m with 53 sequences, total weight= 52.8486 avg weight= 0.997143 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jy1A/info/1jy1A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jy1A/nostruct-align/1jy1A.t05-thin90.a2m.gz, have 23521 columns in 97 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tgsI/nostruct-align/1tgsI.t05-thin90.a2m.gz # 1tgsI.t05-thin90.a2m with 394 sequences, total weight= 124.229 avg weight= 0.315301 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31112 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tgsI/info/1tgsI.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tgsI/nostruct-align/1tgsI.t05-thin90.a2m.gz, have 23577 columns in 98 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i27A/nostruct-align/1i27A.t05-thin90.a2m.gz # 1i27A.t05-thin90.a2m with 11 sequences, total weight= 5.35869 avg weight= 0.487153 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i27A/info/1i27A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i27A/nostruct-align/1i27A.t05-thin90.a2m.gz, have 23650 columns in 99 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kjwA/nostruct-align/1kjwA.t05-thin90.a2m.gz # 1kjwA.t05-thin90.a2m with 801 sequences, total weight= 801 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22302 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kjwA/info/1kjwA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kjwA/nostruct-align/1kjwA.t05-thin90.a2m.gz, have 23942 columns in 100 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fpoA/nostruct-align/1fpoA.t05-thin90.a2m.gz # 1fpoA.t05-thin90.a2m with 2116 sequences, total weight= 2116 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0275 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fpoA/info/1fpoA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fpoA/nostruct-align/1fpoA.t05-thin90.a2m.gz, have 24113 columns in 101 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qsaA/nostruct-align/1qsaA.t05-thin90.a2m.gz # 1qsaA.t05-thin90.a2m with 638 sequences, total weight= 638 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.962672 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qsaA/info/1qsaA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qsaA/nostruct-align/1qsaA.t05-thin90.a2m.gz, have 24731 columns in 102 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gwmA/nostruct-align/1gwmA.t05-thin90.a2m.gz # 1gwmA.t05-thin90.a2m with 3 sequences, total weight= 2.75287 avg weight= 0.917623 9 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gwmA/info/1gwmA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gwmA/nostruct-align/1gwmA.t05-thin90.a2m.gz, have 24884 columns in 103 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vjvA/nostruct-align/1vjvA.t05-thin90.a2m.gz # 1vjvA.t05-thin90.a2m with 1064 sequences, total weight= 1064 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01928 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vjvA/info/1vjvA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vjvA/nostruct-align/1vjvA.t05-thin90.a2m.gz, have 25251 columns in 104 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nlqA/nostruct-align/1nlqA.t05-thin90.a2m.gz # 1nlqA.t05-thin90.a2m with 41 sequences, total weight= 10.0598 avg weight= 0.245361 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nlqA/info/1nlqA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nlqA/nostruct-align/1nlqA.t05-thin90.a2m.gz, have 25356 columns in 105 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b2pA/nostruct-align/1b2pA.t05-thin90.a2m.gz # 1b2pA.t05-thin90.a2m with 169 sequences, total weight= 72.4813 avg weight= 0.428884 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30058 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b2pA/info/1b2pA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1b2pA/nostruct-align/1b2pA.t05-thin90.a2m.gz, have 25475 columns in 106 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fvkA/nostruct-align/1fvkA.t05-thin90.a2m.gz # 1fvkA.t05-thin90.a2m with 797 sequences, total weight= 797 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.941243 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fvkA/info/1fvkA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fvkA/nostruct-align/1fvkA.t05-thin90.a2m.gz, have 25663 columns in 107 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ymtA/nostruct-align/1ymtA.t05-thin90.a2m.gz # 1ymtA.t05-thin90.a2m with 1159 sequences, total weight= 1159 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.90551 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ymtA/info/1ymtA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1ymtA/nostruct-align/1ymtA.t05-thin90.a2m.gz, have 25898 columns in 108 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pmi/nostruct-align/1pmi.t05-thin90.a2m.gz # 1pmi.t05-thin90.a2m with 191 sequences, total weight= 176.627 avg weight= 0.924748 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pmi/info/1pmi.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pmi/nostruct-align/1pmi.t05-thin90.a2m.gz, have 26338 columns in 109 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uaiA/nostruct-align/1uaiA.t05-thin90.a2m.gz # 1uaiA.t05-thin90.a2m with 39 sequences, total weight= 39 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29462 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uaiA/info/1uaiA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uaiA/nostruct-align/1uaiA.t05-thin90.a2m.gz, have 26561 columns in 110 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o8xA/nostruct-align/1o8xA.t05-thin90.a2m.gz # 1o8xA.t05-thin90.a2m with 3559 sequences, total weight= 3559 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.985666 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o8xA/info/1o8xA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o8xA/nostruct-align/1o8xA.t05-thin90.a2m.gz, have 26704 columns in 111 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nulA/nostruct-align/1nulA.t05-thin90.a2m.gz # 1nulA.t05-thin90.a2m with 719 sequences, total weight= 719 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16986 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nulA/info/1nulA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nulA/nostruct-align/1nulA.t05-thin90.a2m.gz, have 26846 columns in 112 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wjxA/nostruct-align/1wjxA.t05-thin90.a2m.gz # 1wjxA.t05-thin90.a2m with 209 sequences, total weight= 7.12878 avg weight= 0.034109 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wjxA/info/1wjxA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wjxA/nostruct-align/1wjxA.t05-thin90.a2m.gz, have 26958 columns in 113 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tca/nostruct-align/1tca.t05-thin90.a2m.gz # 1tca.t05-thin90.a2m with 7181 sequences, total weight= 7181 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.701543 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tca/info/1tca.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tca/nostruct-align/1tca.t05-thin90.a2m.gz, have 27275 columns in 114 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lugA/nostruct-align/1lugA.t05-thin90.a2m.gz # 1lugA.t05-thin90.a2m with 410 sequences, total weight= 117.943 avg weight= 0.287665 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30341 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lugA/info/1lugA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lugA/nostruct-align/1lugA.t05-thin90.a2m.gz, have 27534 columns in 115 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wmhB/nostruct-align/1wmhB.t05-thin90.a2m.gz # 1wmhB.t05-thin90.a2m with 23 sequences, total weight= 6.7439 avg weight= 0.293213 20 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wmhB/info/1wmhB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wmhB/nostruct-align/1wmhB.t05-thin90.a2m.gz, have 27616 columns in 116 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oaiA/nostruct-align/1oaiA.t05-thin90.a2m.gz # 1oaiA.t05-thin90.a2m with 21 sequences, total weight= 7.98117 avg weight= 0.380056 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oaiA/info/1oaiA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oaiA/nostruct-align/1oaiA.t05-thin90.a2m.gz, have 27675 columns in 117 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jr8A/nostruct-align/1jr8A.t05-thin90.a2m.gz # 1jr8A.t05-thin90.a2m with 122 sequences, total weight= 111.021 avg weight= 0.910006 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jr8A/info/1jr8A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jr8A/nostruct-align/1jr8A.t05-thin90.a2m.gz, have 27780 columns in 118 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j1nA/nostruct-align/1j1nA.t05-thin90.a2m.gz # 1j1nA.t05-thin90.a2m with 1832 sequences, total weight= 1832 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.904334 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j1nA/info/1j1nA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j1nA/nostruct-align/1j1nA.t05-thin90.a2m.gz, have 28272 columns in 119 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v58A/nostruct-align/1v58A.t05-thin90.a2m.gz # 1v58A.t05-thin90.a2m with 817 sequences, total weight= 817 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.93017 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v58A/info/1v58A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v58A/nostruct-align/1v58A.t05-thin90.a2m.gz, have 28501 columns in 120 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w3oA/nostruct-align/1w3oA.t05-thin90.a2m.gz # 1w3oA.t05-thin90.a2m with 338 sequences, total weight= 338 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14916 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w3oA/info/1w3oA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w3oA/nostruct-align/1w3oA.t05-thin90.a2m.gz, have 28705 columns in 121 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u4gA/nostruct-align/1u4gA.t05-thin90.a2m.gz # 1u4gA.t05-thin90.a2m with 165 sequences, total weight= 158.452 avg weight= 0.960314 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u4gA/info/1u4gA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1u4gA/nostruct-align/1u4gA.t05-thin90.a2m.gz, have 29003 columns in 122 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kllA/nostruct-align/1kllA.t05-thin90.a2m.gz # 1kllA.t05-thin90.a2m with 2595 sequences, total weight= 2595 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.852582 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kllA/info/1kllA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kllA/nostruct-align/1kllA.t05-thin90.a2m.gz, have 29131 columns in 123 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eexA/nostruct-align/1eexA.t05-thin90.a2m.gz # 1eexA.t05-thin90.a2m with 13 sequences, total weight= 3.42866 avg weight= 0.263743 12 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eexA/info/1eexA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1eexA/nostruct-align/1eexA.t05-thin90.a2m.gz, have 29682 columns in 124 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1roaA/nostruct-align/1roaA.t05-thin90.a2m.gz # 1roaA.t05-thin90.a2m with 318 sequences, total weight= 318 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1516 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1roaA/info/1roaA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1roaA/nostruct-align/1roaA.t05-thin90.a2m.gz, have 29793 columns in 125 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1atg/nostruct-align/1atg.t05-thin90.a2m.gz # 1atg.t05-thin90.a2m with 2249 sequences, total weight= 2249 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.86452 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1atg/info/1atg.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1atg/nostruct-align/1atg.t05-thin90.a2m.gz, have 30024 columns in 126 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f74A/nostruct-align/1f74A.t05-thin90.a2m.gz # 1f74A.t05-thin90.a2m with 654 sequences, total weight= 654 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28968 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f74A/info/1f74A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f74A/nostruct-align/1f74A.t05-thin90.a2m.gz, have 30317 columns in 127 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v8hA/nostruct-align/1v8hA.t05-thin90.a2m.gz # 1v8hA.t05-thin90.a2m with 50 sequences, total weight= 22.4818 avg weight= 0.449637 37 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v8hA/info/1v8hA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v8hA/nostruct-align/1v8hA.t05-thin90.a2m.gz, have 30423 columns in 128 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n62B/nostruct-align/1n62B.t05-thin90.a2m.gz # 1n62B.t05-thin90.a2m with 628 sequences, total weight= 549.254 avg weight= 0.874608 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30213 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n62B/info/1n62B.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n62B/nostruct-align/1n62B.t05-thin90.a2m.gz, have 31227 columns in 129 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gpiA/nostruct-align/1gpiA.t05-thin90.a2m.gz # 1gpiA.t05-thin90.a2m with 88 sequences, total weight= 9.87576 avg weight= 0.112225 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gpiA/info/1gpiA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gpiA/nostruct-align/1gpiA.t05-thin90.a2m.gz, have 31658 columns in 130 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uylA/nostruct-align/1uylA.t05-thin90.a2m.gz # 1uylA.t05-thin90.a2m with 374 sequences, total weight= 30.9837 avg weight= 0.0828441 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uylA/info/1uylA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uylA/nostruct-align/1uylA.t05-thin90.a2m.gz, have 31865 columns in 131 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f2tA/nostruct-align/1f2tA.t05-thin90.a2m.gz # 1f2tA.t05-thin90.a2m with 12144 sequences, total weight= 12144 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.840569 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f2tA/info/1f2tA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f2tA/nostruct-align/1f2tA.t05-thin90.a2m.gz, have 32010 columns in 132 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hxn/nostruct-align/1hxn.t05-thin90.a2m.gz # 1hxn.t05-thin90.a2m with 346 sequences, total weight= 277.976 avg weight= 0.803399 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30103 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hxn/info/1hxn.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hxn/nostruct-align/1hxn.t05-thin90.a2m.gz, have 32220 columns in 133 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tn6A/nostruct-align/1tn6A.t05-thin90.a2m.gz # 1tn6A.t05-thin90.a2m with 3511 sequences, total weight= 3511 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.830075 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tn6A/info/1tn6A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tn6A/nostruct-align/1tn6A.t05-thin90.a2m.gz, have 32535 columns in 134 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qo7A/nostruct-align/1qo7A.t05-thin90.a2m.gz # 1qo7A.t05-thin90.a2m with 7492 sequences, total weight= 7492 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.741129 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qo7A/info/1qo7A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qo7A/nostruct-align/1qo7A.t05-thin90.a2m.gz, have 32920 columns in 135 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y7rA/nostruct-align/1y7rA.t05-thin90.a2m.gz # 1y7rA.t05-thin90.a2m with 5494 sequences, total weight= 5494 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.827439 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y7rA/info/1y7rA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1y7rA/nostruct-align/1y7rA.t05-thin90.a2m.gz, have 33053 columns in 136 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lv7A/nostruct-align/1lv7A.t05-thin90.a2m.gz # 1lv7A.t05-thin90.a2m with 7981 sequences, total weight= 7981 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.940835 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lv7A/info/1lv7A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lv7A/nostruct-align/1lv7A.t05-thin90.a2m.gz, have 33304 columns in 137 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2p/2por/nostruct-align/2por.t05-thin90.a2m.gz # 2por.t05-thin90.a2m with 665 sequences, total weight= 665 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17366 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2p/2por/info/2por.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2p/2por/nostruct-align/2por.t05-thin90.a2m.gz, have 33605 columns in 138 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s9uA/nostruct-align/1s9uA.t05-thin90.a2m.gz # 1s9uA.t05-thin90.a2m with 200 sequences, total weight= 200 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03857 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s9uA/info/1s9uA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s9uA/nostruct-align/1s9uA.t05-thin90.a2m.gz, have 33806 columns in 139 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oa8A/nostruct-align/1oa8A.t05-thin90.a2m.gz # 1oa8A.t05-thin90.a2m with 28 sequences, total weight= 11.408 avg weight= 0.407427 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oa8A/info/1oa8A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oa8A/nostruct-align/1oa8A.t05-thin90.a2m.gz, have 33934 columns in 140 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j8bA/nostruct-align/1j8bA.t05-thin90.a2m.gz # 1j8bA.t05-thin90.a2m with 189 sequences, total weight= 25.5352 avg weight= 0.135107 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j8bA/info/1j8bA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j8bA/nostruct-align/1j8bA.t05-thin90.a2m.gz, have 34026 columns in 141 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w23A/nostruct-align/1w23A.t05-thin90.a2m.gz # 1w23A.t05-thin90.a2m with 7728 sequences, total weight= 7728 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.859231 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w23A/info/1w23A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w23A/nostruct-align/1w23A.t05-thin90.a2m.gz, have 34386 columns in 142 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n2eA/nostruct-align/1n2eA.t05-thin90.a2m.gz # 1n2eA.t05-thin90.a2m with 214 sequences, total weight= 19.4386 avg weight= 0.0908347 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n2eA/info/1n2eA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n2eA/nostruct-align/1n2eA.t05-thin90.a2m.gz, have 34674 columns in 143 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eyeA/nostruct-align/1eyeA.t05-thin90.a2m.gz # 1eyeA.t05-thin90.a2m with 479 sequences, total weight= 82.5604 avg weight= 0.17236 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30283 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eyeA/info/1eyeA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1eyeA/nostruct-align/1eyeA.t05-thin90.a2m.gz, have 34930 columns in 144 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nscA/nostruct-align/1nscA.t05-thin90.a2m.gz # 1nscA.t05-thin90.a2m with 65 sequences, total weight= 5.90368 avg weight= 0.0908259 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nscA/info/1nscA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nscA/nostruct-align/1nscA.t05-thin90.a2m.gz, have 35320 columns in 145 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hx0A/nostruct-align/1hx0A.t05-thin90.a2m.gz # 1hx0A.t05-thin90.a2m with 1841 sequences, total weight= 1841 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.998611 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hx0A/info/1hx0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hx0A/nostruct-align/1hx0A.t05-thin90.a2m.gz, have 35816 columns in 146 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qftA/nostruct-align/1qftA.t05-thin90.a2m.gz # 1qftA.t05-thin90.a2m with 73 sequences, total weight= 73 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07809 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qftA/info/1qftA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qftA/nostruct-align/1qftA.t05-thin90.a2m.gz, have 35991 columns in 147 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g8aA/nostruct-align/1g8aA.t05-thin90.a2m.gz # 1g8aA.t05-thin90.a2m with 8033 sequences, total weight= 8033 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.720417 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g8aA/info/1g8aA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g8aA/nostruct-align/1g8aA.t05-thin90.a2m.gz, have 36218 columns in 148 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b9mA/nostruct-align/1b9mA.t05-thin90.a2m.gz # 1b9mA.t05-thin90.a2m with 4708 sequences, total weight= 4708 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12851 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b9mA/info/1b9mA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1b9mA/nostruct-align/1b9mA.t05-thin90.a2m.gz, have 36476 columns in 149 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k2xB/nostruct-align/1k2xB.t05-thin90.a2m.gz # 1k2xB.t05-thin90.a2m with 153 sequences, total weight= 35.8833 avg weight= 0.234532 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30042 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k2xB/info/1k2xB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k2xB/nostruct-align/1k2xB.t05-thin90.a2m.gz, have 36611 columns in 150 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yfqA/nostruct-align/1yfqA.t05-thin90.a2m.gz # 1yfqA.t05-thin90.a2m with 9100 sequences, total weight= 9100 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.736599 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yfqA/info/1yfqA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1yfqA/nostruct-align/1yfqA.t05-thin90.a2m.gz, have 36953 columns in 151 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xkpC/nostruct-align/1xkpC.t05-thin90.a2m.gz # 1xkpC.t05-thin90.a2m with 8 sequences, total weight= 4.95386 avg weight= 0.619232 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xkpC/info/1xkpC.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xkpC/nostruct-align/1xkpC.t05-thin90.a2m.gz, have 37079 columns in 152 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dtdB/nostruct-align/1dtdB.t05-thin90.a2m.gz # 1dtdB.t05-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.675221 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dtdB/info/1dtdB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dtdB/nostruct-align/1dtdB.t05-thin90.a2m.gz, have 37140 columns in 153 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g8eA/nostruct-align/1g8eA.t05-thin90.a2m.gz # 1g8eA.t05-thin90.a2m with 30 sequences, total weight= 7.7171 avg weight= 0.257237 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g8eA/info/1g8eA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g8eA/nostruct-align/1g8eA.t05-thin90.a2m.gz, have 37238 columns in 154 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q5zA/nostruct-align/1q5zA.t05-thin90.a2m.gz # 1q5zA.t05-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.588933 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q5zA/info/1q5zA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q5zA/nostruct-align/1q5zA.t05-thin90.a2m.gz, have 37383 columns in 155 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s99A/nostruct-align/1s99A.t05-thin90.a2m.gz # 1s99A.t05-thin90.a2m with 4 sequences, total weight= 4 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20375 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s99A/info/1s99A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s99A/nostruct-align/1s99A.t05-thin90.a2m.gz, have 37569 columns in 156 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w6uA/nostruct-align/1w6uA.t05-thin90.a2m.gz # 1w6uA.t05-thin90.a2m with 9548 sequences, total weight= 9548 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02798 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w6uA/info/1w6uA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w6uA/nostruct-align/1w6uA.t05-thin90.a2m.gz, have 37857 columns in 157 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sluA/nostruct-align/1sluA.t05-thin90.a2m.gz # 1sluA.t05-thin90.a2m with 30 sequences, total weight= 11.51 avg weight= 0.383668 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sluA/info/1sluA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sluA/nostruct-align/1sluA.t05-thin90.a2m.gz, have 37988 columns in 158 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1itxA/nostruct-align/1itxA.t05-thin90.a2m.gz # 1itxA.t05-thin90.a2m with 910 sequences, total weight= 910 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08024 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1itxA/info/1itxA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1itxA/nostruct-align/1itxA.t05-thin90.a2m.gz, have 38407 columns in 159 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o97D/nostruct-align/1o97D.t05-thin90.a2m.gz # 1o97D.t05-thin90.a2m with 488 sequences, total weight= 61.1035 avg weight= 0.125212 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30066 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o97D/info/1o97D.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o97D/nostruct-align/1o97D.t05-thin90.a2m.gz, have 38722 columns in 160 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/4e/4eugA/nostruct-align/4eugA.t05-thin90.a2m.gz # 4eugA.t05-thin90.a2m with 263 sequences, total weight= 20.7441 avg weight= 0.078875 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/4e/4eugA/info/4eugA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/4e/4eugA/nostruct-align/4eugA.t05-thin90.a2m.gz, have 38947 columns in 161 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wrrA/nostruct-align/1wrrA.t05-thin90.a2m.gz # 1wrrA.t05-thin90.a2m with 66 sequences, total weight= 14.3405 avg weight= 0.21728 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wrrA/info/1wrrA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wrrA/nostruct-align/1wrrA.t05-thin90.a2m.gz, have 39242 columns in 162 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vh5A/nostruct-align/1vh5A.t05-thin90.a2m.gz # 1vh5A.t05-thin90.a2m with 954 sequences, total weight= 954 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.948231 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vh5A/info/1vh5A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vh5A/nostruct-align/1vh5A.t05-thin90.a2m.gz, have 39380 columns in 163 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vljA/nostruct-align/1vljA.t05-thin90.a2m.gz # 1vljA.t05-thin90.a2m with 959 sequences, total weight= 959 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14668 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vljA/info/1vljA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vljA/nostruct-align/1vljA.t05-thin90.a2m.gz, have 39778 columns in 164 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rjdA/nostruct-align/1rjdA.t05-thin90.a2m.gz # 1rjdA.t05-thin90.a2m with 322 sequences, total weight= 322 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00615 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rjdA/info/1rjdA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rjdA/nostruct-align/1rjdA.t05-thin90.a2m.gz, have 40106 columns in 165 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pwbA/nostruct-align/1pwbA.t05-thin90.a2m.gz # 1pwbA.t05-thin90.a2m with 2085 sequences, total weight= 97.797 avg weight= 0.046905 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30087 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pwbA/info/1pwbA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pwbA/nostruct-align/1pwbA.t05-thin90.a2m.gz, have 40257 columns in 166 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cv8/nostruct-align/1cv8.t05-thin90.a2m.gz # 1cv8.t05-thin90.a2m with 5 sequences, total weight= 2.72305 avg weight= 0.54461 10 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cv8/info/1cv8.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cv8/nostruct-align/1cv8.t05-thin90.a2m.gz, have 40430 columns in 167 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rylA/nostruct-align/1rylA.t05-thin90.a2m.gz # 1rylA.t05-thin90.a2m with 10 sequences, total weight= 10 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17921 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rylA/info/1rylA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rylA/nostruct-align/1rylA.t05-thin90.a2m.gz, have 40587 columns in 168 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1irdB/nostruct-align/1irdB.t05-thin90.a2m.gz # 1irdB.t05-thin90.a2m with 742 sequences, total weight= 126.592 avg weight= 0.170609 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31047 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1irdB/info/1irdB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1irdB/nostruct-align/1irdB.t05-thin90.a2m.gz, have 40733 columns in 169 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hbnB/nostruct-align/1hbnB.t05-thin90.a2m.gz # 1hbnB.t05-thin90.a2m with 21 sequences, total weight= 3.80283 avg weight= 0.181087 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hbnB/info/1hbnB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hbnB/nostruct-align/1hbnB.t05-thin90.a2m.gz, have 41175 columns in 170 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j3wA/nostruct-align/1j3wA.t05-thin90.a2m.gz # 1j3wA.t05-thin90.a2m with 14 sequences, total weight= 7.01759 avg weight= 0.501256 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j3wA/info/1j3wA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j3wA/nostruct-align/1j3wA.t05-thin90.a2m.gz, have 41309 columns in 171 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1twdA/nostruct-align/1twdA.t05-thin90.a2m.gz # 1twdA.t05-thin90.a2m with 88 sequences, total weight= 25.1883 avg weight= 0.28623 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1twdA/info/1twdA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1twdA/nostruct-align/1twdA.t05-thin90.a2m.gz, have 41543 columns in 172 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dmhA/nostruct-align/1dmhA.t05-thin90.a2m.gz # 1dmhA.t05-thin90.a2m with 294 sequences, total weight= 143.797 avg weight= 0.489106 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30118 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dmhA/info/1dmhA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dmhA/nostruct-align/1dmhA.t05-thin90.a2m.gz, have 41852 columns in 173 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xffA/nostruct-align/1xffA.t05-thin90.a2m.gz # 1xffA.t05-thin90.a2m with 1214 sequences, total weight= 1214 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21576 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xffA/info/1xffA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xffA/nostruct-align/1xffA.t05-thin90.a2m.gz, have 42090 columns in 174 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1ka1A/nostruct-align/1ka1A.t05-thin90.a2m.gz # 1ka1A.t05-thin90.a2m with 754 sequences, total weight= 754 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09131 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1ka1A/info/1ka1A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1ka1A/nostruct-align/1ka1A.t05-thin90.a2m.gz, have 42444 columns in 175 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pq1A/nostruct-align/1pq1A.t05-thin90.a2m.gz # 1pq1A.t05-thin90.a2m with 153 sequences, total weight= 153 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.111 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pq1A/info/1pq1A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pq1A/nostruct-align/1pq1A.t05-thin90.a2m.gz, have 42591 columns in 176 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ejdA/nostruct-align/1ejdA.t05-thin90.a2m.gz # 1ejdA.t05-thin90.a2m with 597 sequences, total weight= 101.657 avg weight= 0.170279 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30491 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ejdA/info/1ejdA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ejdA/nostruct-align/1ejdA.t05-thin90.a2m.gz, have 43010 columns in 177 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1el5A/nostruct-align/1el5A.t05-thin90.a2m.gz # 1el5A.t05-thin90.a2m with 8839 sequences, total weight= 8839 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.716675 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1el5A/info/1el5A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1el5A/nostruct-align/1el5A.t05-thin90.a2m.gz, have 43395 columns in 178 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ursA/nostruct-align/1ursA.t05-thin90.a2m.gz # 1ursA.t05-thin90.a2m with 1904 sequences, total weight= 1904 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.855765 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ursA/info/1ursA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ursA/nostruct-align/1ursA.t05-thin90.a2m.gz, have 43761 columns in 179 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1svsA/nostruct-align/1svsA.t05-thin90.a2m.gz # 1svsA.t05-thin90.a2m with 692 sequences, total weight= 122.518 avg weight= 0.177049 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30197 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1svsA/info/1svsA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1svsA/nostruct-align/1svsA.t05-thin90.a2m.gz, have 44077 columns in 180 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q35A/nostruct-align/1q35A.t05-thin90.a2m.gz # 1q35A.t05-thin90.a2m with 2091 sequences, total weight= 2091 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.840633 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q35A/info/1q35A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q35A/nostruct-align/1q35A.t05-thin90.a2m.gz, have 44394 columns in 181 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gnuA/nostruct-align/1gnuA.t05-thin90.a2m.gz # 1gnuA.t05-thin90.a2m with 113 sequences, total weight= 22.8371 avg weight= 0.202098 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gnuA/info/1gnuA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gnuA/nostruct-align/1gnuA.t05-thin90.a2m.gz, have 44511 columns in 182 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vhh/nostruct-align/1vhh.t05-thin90.a2m.gz # 1vhh.t05-thin90.a2m with 57 sequences, total weight= 6.09033 avg weight= 0.106848 19 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vhh/info/1vhh.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vhh/nostruct-align/1vhh.t05-thin90.a2m.gz, have 44668 columns in 183 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gcqC/nostruct-align/1gcqC.t05-thin90.a2m.gz # 1gcqC.t05-thin90.a2m with 717 sequences, total weight= 104.907 avg weight= 0.146314 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31374 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gcqC/info/1gcqC.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gcqC/nostruct-align/1gcqC.t05-thin90.a2m.gz, have 44737 columns in 184 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g2bA/nostruct-align/1g2bA.t05-thin90.a2m.gz # 1g2bA.t05-thin90.a2m with 164 sequences, total weight= 42.7101 avg weight= 0.260427 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30092 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g2bA/info/1g2bA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g2bA/nostruct-align/1g2bA.t05-thin90.a2m.gz, have 44799 columns in 185 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oi7A/nostruct-align/1oi7A.t05-thin90.a2m.gz # 1oi7A.t05-thin90.a2m with 516 sequences, total weight= 179.112 avg weight= 0.347116 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30655 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oi7A/info/1oi7A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oi7A/nostruct-align/1oi7A.t05-thin90.a2m.gz, have 45069 columns in 186 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v77A/nostruct-align/1v77A.t05-thin90.a2m.gz # 1v77A.t05-thin90.a2m with 91 sequences, total weight= 91 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1161 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v77A/info/1v77A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v77A/nostruct-align/1v77A.t05-thin90.a2m.gz, have 45271 columns in 187 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l7lA/nostruct-align/1l7lA.t05-thin90.a2m.gz # 1l7lA.t05-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0258 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l7lA/info/1l7lA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1l7lA/nostruct-align/1l7lA.t05-thin90.a2m.gz, have 45392 columns in 188 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rvkA/nostruct-align/1rvkA.t05-thin90.a2m.gz # 1rvkA.t05-thin90.a2m with 1090 sequences, total weight= 1090 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16725 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rvkA/info/1rvkA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rvkA/nostruct-align/1rvkA.t05-thin90.a2m.gz, have 45773 columns in 189 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sdsA/nostruct-align/1sdsA.t05-thin90.a2m.gz # 1sdsA.t05-thin90.a2m with 426 sequences, total weight= 426 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29601 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sdsA/info/1sdsA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sdsA/nostruct-align/1sdsA.t05-thin90.a2m.gz, have 45888 columns in 190 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xpmA/nostruct-align/1xpmA.t05-thin90.a2m.gz # 1xpmA.t05-thin90.a2m with 1119 sequences, total weight= 1119 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0779 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xpmA/info/1xpmA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xpmA/nostruct-align/1xpmA.t05-thin90.a2m.gz, have 46277 columns in 191 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ifc/nostruct-align/1ifc.t05-thin90.a2m.gz # 1ifc.t05-thin90.a2m with 281 sequences, total weight= 53.6494 avg weight= 0.190923 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ifc/info/1ifc.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ifc/nostruct-align/1ifc.t05-thin90.a2m.gz, have 46408 columns in 192 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kolA/nostruct-align/1kolA.t05-thin90.a2m.gz # 1kolA.t05-thin90.a2m with 3801 sequences, total weight= 3801 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0731 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kolA/info/1kolA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kolA/nostruct-align/1kolA.t05-thin90.a2m.gz, have 46804 columns in 193 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lxjA/nostruct-align/1lxjA.t05-thin90.a2m.gz # 1lxjA.t05-thin90.a2m with 98 sequences, total weight= 34.5857 avg weight= 0.352915 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lxjA/info/1lxjA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lxjA/nostruct-align/1lxjA.t05-thin90.a2m.gz, have 46908 columns in 194 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54C/nostruct-align/1v54C.t05-thin90.a2m.gz # 1v54C.t05-thin90.a2m with 873 sequences, total weight= 68.2452 avg weight= 0.0781732 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30093 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54C/info/1v54C.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v54C/nostruct-align/1v54C.t05-thin90.a2m.gz, have 47167 columns in 195 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dusA/nostruct-align/1dusA.t05-thin90.a2m.gz # 1dusA.t05-thin90.a2m with 11459 sequences, total weight= 11459 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.674378 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dusA/info/1dusA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dusA/nostruct-align/1dusA.t05-thin90.a2m.gz, have 47361 columns in 196 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vl2A/nostruct-align/1vl2A.t05-thin90.a2m.gz # 1vl2A.t05-thin90.a2m with 1491 sequences, total weight= 1491 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19322 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vl2A/info/1vl2A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vl2A/nostruct-align/1vl2A.t05-thin90.a2m.gz, have 47759 columns in 197 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1viaA/nostruct-align/1viaA.t05-thin90.a2m.gz # 1viaA.t05-thin90.a2m with 5543 sequences, total weight= 5543 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.799972 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1viaA/info/1viaA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1viaA/nostruct-align/1viaA.t05-thin90.a2m.gz, have 47920 columns in 198 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pb7A/nostruct-align/1pb7A.t05-thin90.a2m.gz # 1pb7A.t05-thin90.a2m with 1870 sequences, total weight= 1870 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.966701 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pb7A/info/1pb7A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pb7A/nostruct-align/1pb7A.t05-thin90.a2m.gz, have 48201 columns in 199 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lyvA/nostruct-align/1lyvA.t05-thin90.a2m.gz # 1lyvA.t05-thin90.a2m with 1035 sequences, total weight= 1035 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21805 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lyvA/info/1lyvA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lyvA/nostruct-align/1lyvA.t05-thin90.a2m.gz, have 48484 columns in 200 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lb3A/nostruct-align/1lb3A.t05-thin90.a2m.gz # 1lb3A.t05-thin90.a2m with 504 sequences, total weight= 504 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29351 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lb3A/info/1lb3A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lb3A/nostruct-align/1lb3A.t05-thin90.a2m.gz, have 48651 columns in 201 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c3pA/nostruct-align/1c3pA.t05-thin90.a2m.gz # 1c3pA.t05-thin90.a2m with 555 sequences, total weight= 390.998 avg weight= 0.704501 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30535 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c3pA/info/1c3pA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1c3pA/nostruct-align/1c3pA.t05-thin90.a2m.gz, have 49023 columns in 202 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b8zA/nostruct-align/1b8zA.t05-thin90.a2m.gz # 1b8zA.t05-thin90.a2m with 377 sequences, total weight= 15.4057 avg weight= 0.0408638 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b8zA/info/1b8zA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1b8zA/nostruct-align/1b8zA.t05-thin90.a2m.gz, have 49090 columns in 203 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wb4A/nostruct-align/1wb4A.t05-thin90.a2m.gz # 1wb4A.t05-thin90.a2m with 9092 sequences, total weight= 9092 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.691786 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wb4A/info/1wb4A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wb4A/nostruct-align/1wb4A.t05-thin90.a2m.gz, have 49373 columns in 204 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uteA/nostruct-align/1uteA.t05-thin90.a2m.gz # 1uteA.t05-thin90.a2m with 2766 sequences, total weight= 2766 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.668653 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uteA/info/1uteA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uteA/nostruct-align/1uteA.t05-thin90.a2m.gz, have 49675 columns in 205 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1ks8A/nostruct-align/1ks8A.t05-thin90.a2m.gz # 1ks8A.t05-thin90.a2m with 267 sequences, total weight= 73.6305 avg weight= 0.27577 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30073 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1ks8A/info/1ks8A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1ks8A/nostruct-align/1ks8A.t05-thin90.a2m.gz, have 50108 columns in 206 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1ssxA/nostruct-align/1ssxA.t05-thin90.a2m.gz # 1ssxA.t05-thin90.a2m with 3492 sequences, total weight= 3492 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21946 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1ssxA/info/1ssxA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1ssxA/nostruct-align/1ssxA.t05-thin90.a2m.gz, have 50306 columns in 207 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ou8A/nostruct-align/1ou8A.t05-thin90.a2m.gz # 1ou8A.t05-thin90.a2m with 55 sequences, total weight= 7.84847 avg weight= 0.142699 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ou8A/info/1ou8A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ou8A/nostruct-align/1ou8A.t05-thin90.a2m.gz, have 50412 columns in 208 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bbkL/nostruct-align/2bbkL.t05-thin90.a2m.gz # 2bbkL.t05-thin90.a2m with 11 sequences, total weight= 2.93114 avg weight= 0.266467 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bbkL/info/2bbkL.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2b/2bbkL/nostruct-align/2bbkL.t05-thin90.a2m.gz, have 50537 columns in 209 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3c/3chbD/nostruct-align/3chbD.t05-thin90.a2m.gz # 3chbD.t05-thin90.a2m with 7 sequences, total weight= 2.54586 avg weight= 0.363694 9 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3c/3chbD/info/3chbD.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/3c/3chbD/nostruct-align/3chbD.t05-thin90.a2m.gz, have 50640 columns in 210 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mpgA/nostruct-align/1mpgA.t05-thin90.a2m.gz # 1mpgA.t05-thin90.a2m with 842 sequences, total weight= 842 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04111 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mpgA/info/1mpgA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mpgA/nostruct-align/1mpgA.t05-thin90.a2m.gz, have 50922 columns in 211 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1so7A/nostruct-align/1so7A.t05-thin90.a2m.gz # 1so7A.t05-thin90.a2m with 908 sequences, total weight= 908 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06599 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1so7A/info/1so7A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1so7A/nostruct-align/1so7A.t05-thin90.a2m.gz, have 51283 columns in 212 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1os6A/nostruct-align/1os6A.t05-thin90.a2m.gz # 1os6A.t05-thin90.a2m with 60 sequences, total weight= 37.8701 avg weight= 0.631168 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1os6A/info/1os6A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1os6A/nostruct-align/1os6A.t05-thin90.a2m.gz, have 51354 columns in 213 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fjhA/nostruct-align/1fjhA.t05-thin90.a2m.gz # 1fjhA.t05-thin90.a2m with 8644 sequences, total weight= 8644 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10181 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fjhA/info/1fjhA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fjhA/nostruct-align/1fjhA.t05-thin90.a2m.gz, have 51590 columns in 214 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1obfO/nostruct-align/1obfO.t05-thin90.a2m.gz # 1obfO.t05-thin90.a2m with 1291 sequences, total weight= 65.1934 avg weight= 0.0504984 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1obfO/info/1obfO.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1obfO/nostruct-align/1obfO.t05-thin90.a2m.gz, have 51925 columns in 215 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gvfA/nostruct-align/1gvfA.t05-thin90.a2m.gz # 1gvfA.t05-thin90.a2m with 298 sequences, total weight= 26.3594 avg weight= 0.0884542 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gvfA/info/1gvfA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gvfA/nostruct-align/1gvfA.t05-thin90.a2m.gz, have 52198 columns in 216 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pvmA/nostruct-align/1pvmA.t05-thin90.a2m.gz # 1pvmA.t05-thin90.a2m with 2798 sequences, total weight= 2798 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22527 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pvmA/info/1pvmA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pvmA/nostruct-align/1pvmA.t05-thin90.a2m.gz, have 52376 columns in 217 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pu6A/nostruct-align/1pu6A.t05-thin90.a2m.gz # 1pu6A.t05-thin90.a2m with 890 sequences, total weight= 890 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11364 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pu6A/info/1pu6A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pu6A/nostruct-align/1pu6A.t05-thin90.a2m.gz, have 52593 columns in 218 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vfjA/nostruct-align/1vfjA.t05-thin90.a2m.gz # 1vfjA.t05-thin90.a2m with 310 sequences, total weight= 19.22 avg weight= 0.0620001 42 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vfjA/info/1vfjA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vfjA/nostruct-align/1vfjA.t05-thin90.a2m.gz, have 52709 columns in 219 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mixA/nostruct-align/1mixA.t05-thin90.a2m.gz # 1mixA.t05-thin90.a2m with 503 sequences, total weight= 503 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09428 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mixA/info/1mixA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mixA/nostruct-align/1mixA.t05-thin90.a2m.gz, have 52915 columns in 220 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eexB/nostruct-align/1eexB.t05-thin90.a2m.gz # 1eexB.t05-thin90.a2m with 21 sequences, total weight= 9.58532 avg weight= 0.456444 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eexB/info/1eexB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1eexB/nostruct-align/1eexB.t05-thin90.a2m.gz, have 53093 columns in 221 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i9zA/nostruct-align/1i9zA.t05-thin90.a2m.gz # 1i9zA.t05-thin90.a2m with 981 sequences, total weight= 981 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.927001 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i9zA/info/1i9zA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i9zA/nostruct-align/1i9zA.t05-thin90.a2m.gz, have 53429 columns in 222 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h16A/nostruct-align/1h16A.t05-thin90.a2m.gz # 1h16A.t05-thin90.a2m with 161 sequences, total weight= 90.955 avg weight= 0.564938 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h16A/info/1h16A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h16A/nostruct-align/1h16A.t05-thin90.a2m.gz, have 54188 columns in 223 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fnlA/nostruct-align/1fnlA.t05-thin90.a2m.gz # 1fnlA.t05-thin90.a2m with 9322 sequences, total weight= 9322 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.903402 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fnlA/info/1fnlA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fnlA/nostruct-align/1fnlA.t05-thin90.a2m.gz, have 54361 columns in 224 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1epxA/nostruct-align/1epxA.t05-thin90.a2m.gz # 1epxA.t05-thin90.a2m with 267 sequences, total weight= 15.7195 avg weight= 0.0588744 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1epxA/info/1epxA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1epxA/nostruct-align/1epxA.t05-thin90.a2m.gz, have 54718 columns in 225 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i2tA/nostruct-align/1i2tA.t05-thin90.a2m.gz # 1i2tA.t05-thin90.a2m with 87 sequences, total weight= 11.0495 avg weight= 0.127006 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i2tA/info/1i2tA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i2tA/nostruct-align/1i2tA.t05-thin90.a2m.gz, have 54779 columns in 226 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nnlA/nostruct-align/1nnlA.t05-thin90.a2m.gz # 1nnlA.t05-thin90.a2m with 4926 sequences, total weight= 4926 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.907361 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nnlA/info/1nnlA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nnlA/nostruct-align/1nnlA.t05-thin90.a2m.gz, have 54984 columns in 227 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54G/nostruct-align/1v54G.t05-thin90.a2m.gz # 1v54G.t05-thin90.a2m with 46 sequences, total weight= 11.7878 avg weight= 0.256256 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54G/info/1v54G.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v54G/nostruct-align/1v54G.t05-thin90.a2m.gz, have 55068 columns in 228 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fk5A/nostruct-align/1fk5A.t05-thin90.a2m.gz # 1fk5A.t05-thin90.a2m with 206 sequences, total weight= 43.0458 avg weight= 0.20896 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3004 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fk5A/info/1fk5A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fk5A/nostruct-align/1fk5A.t05-thin90.a2m.gz, have 55161 columns in 229 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1al3/nostruct-align/1al3.t05-thin90.a2m.gz # 1al3.t05-thin90.a2m with 5370 sequences, total weight= 5042.22 avg weight= 0.938961 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30201 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1al3/info/1al3.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1al3/nostruct-align/1al3.t05-thin90.a2m.gz, have 55398 columns in 230 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tx4A/nostruct-align/1tx4A.t05-thin90.a2m.gz # 1tx4A.t05-thin90.a2m with 971 sequences, total weight= 971 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17968 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tx4A/info/1tx4A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tx4A/nostruct-align/1tx4A.t05-thin90.a2m.gz, have 55594 columns in 231 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w2wA/nostruct-align/1w2wA.t05-thin90.a2m.gz # 1w2wA.t05-thin90.a2m with 146 sequences, total weight= 27.5791 avg weight= 0.188898 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w2wA/info/1w2wA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w2wA/nostruct-align/1w2wA.t05-thin90.a2m.gz, have 55805 columns in 232 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r0mA/nostruct-align/1r0mA.t05-thin90.a2m.gz # 1r0mA.t05-thin90.a2m with 1106 sequences, total weight= 1106 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18546 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r0mA/info/1r0mA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r0mA/nostruct-align/1r0mA.t05-thin90.a2m.gz, have 56165 columns in 233 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nthA/nostruct-align/1nthA.t05-thin90.a2m.gz # 1nthA.t05-thin90.a2m with 5 sequences, total weight= 3.179 avg weight= 0.6358 7 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nthA/info/1nthA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nthA/nostruct-align/1nthA.t05-thin90.a2m.gz, have 56622 columns in 234 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c4qA/nostruct-align/1c4qA.t05-thin90.a2m.gz # 1c4qA.t05-thin90.a2m with 12 sequences, total weight= 2.93614 avg weight= 0.244678 10 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c4qA/info/1c4qA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1c4qA/nostruct-align/1c4qA.t05-thin90.a2m.gz, have 56691 columns in 235 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jzgA/nostruct-align/1jzgA.t05-thin90.a2m.gz # 1jzgA.t05-thin90.a2m with 32 sequences, total weight= 7.37614 avg weight= 0.230504 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jzgA/info/1jzgA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jzgA/nostruct-align/1jzgA.t05-thin90.a2m.gz, have 56819 columns in 236 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n62A/nostruct-align/1n62A.t05-thin90.a2m.gz # 1n62A.t05-thin90.a2m with 645 sequences, total weight= 117.429 avg weight= 0.182061 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30616 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n62A/info/1n62A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n62A/nostruct-align/1n62A.t05-thin90.a2m.gz, have 56980 columns in 237 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h0hB/nostruct-align/1h0hB.t05-thin90.a2m.gz # 1h0hB.t05-thin90.a2m with 980 sequences, total weight= 980 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08038 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h0hB/info/1h0hB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h0hB/nostruct-align/1h0hB.t05-thin90.a2m.gz, have 57194 columns in 238 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mg4A/nostruct-align/1mg4A.t05-thin90.a2m.gz # 1mg4A.t05-thin90.a2m with 116 sequences, total weight= 42.5174 avg weight= 0.366529 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mg4A/info/1mg4A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mg4A/nostruct-align/1mg4A.t05-thin90.a2m.gz, have 57295 columns in 239 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1omrA/nostruct-align/1omrA.t05-thin90.a2m.gz # 1omrA.t05-thin90.a2m with 2604 sequences, total weight= 2604 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.875915 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1omrA/info/1omrA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1omrA/nostruct-align/1omrA.t05-thin90.a2m.gz, have 57496 columns in 240 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f60A/nostruct-align/1f60A.t05-thin90.a2m.gz # 1f60A.t05-thin90.a2m with 2464 sequences, total weight= 944.343 avg weight= 0.383256 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32288 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f60A/info/1f60A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f60A/nostruct-align/1f60A.t05-thin90.a2m.gz, have 57936 columns in 241 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gvp/nostruct-align/1gvp.t05-thin90.a2m.gz # 1gvp.t05-thin90.a2m with 11 sequences, total weight= 5.9852 avg weight= 0.544109 19 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gvp/info/1gvp.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gvp/nostruct-align/1gvp.t05-thin90.a2m.gz, have 58023 columns in 242 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1knmA/nostruct-align/1knmA.t05-thin90.a2m.gz # 1knmA.t05-thin90.a2m with 384 sequences, total weight= 384 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09403 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1knmA/info/1knmA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1knmA/nostruct-align/1knmA.t05-thin90.a2m.gz, have 58152 columns in 243 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y6xA/nostruct-align/1y6xA.t05-thin90.a2m.gz # 1y6xA.t05-thin90.a2m with 198 sequences, total weight= 15.082 avg weight= 0.0761718 42 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y6xA/info/1y6xA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1y6xA/nostruct-align/1y6xA.t05-thin90.a2m.gz, have 58239 columns in 244 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b9wA/nostruct-align/1b9wA.t05-thin90.a2m.gz # 1b9wA.t05-thin90.a2m with 26 sequences, total weight= 5.20829 avg weight= 0.200319 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b9wA/info/1b9wA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1b9wA/nostruct-align/1b9wA.t05-thin90.a2m.gz, have 58328 columns in 245 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o9gA/nostruct-align/1o9gA.t05-thin90.a2m.gz # 1o9gA.t05-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.624727 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o9gA/info/1o9gA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o9gA/nostruct-align/1o9gA.t05-thin90.a2m.gz, have 58577 columns in 246 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fjjA/nostruct-align/1fjjA.t05-thin90.a2m.gz # 1fjjA.t05-thin90.a2m with 350 sequences, total weight= 350 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28072 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fjjA/info/1fjjA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fjjA/nostruct-align/1fjjA.t05-thin90.a2m.gz, have 58736 columns in 247 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1ccwB/nostruct-align/1ccwB.t05-thin90.a2m.gz # 1ccwB.t05-thin90.a2m with 197 sequences, total weight= 55.7209 avg weight= 0.282847 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1ccwB/info/1ccwB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1ccwB/nostruct-align/1ccwB.t05-thin90.a2m.gz, have 59219 columns in 248 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1josA/nostruct-align/1josA.t05-thin90.a2m.gz # 1josA.t05-thin90.a2m with 219 sequences, total weight= 41.9723 avg weight= 0.191654 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30037 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1josA/info/1josA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1josA/nostruct-align/1josA.t05-thin90.a2m.gz, have 59319 columns in 249 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1obdA/nostruct-align/1obdA.t05-thin90.a2m.gz # 1obdA.t05-thin90.a2m with 271 sequences, total weight= 45.0671 avg weight= 0.166299 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1obdA/info/1obdA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1obdA/nostruct-align/1obdA.t05-thin90.a2m.gz, have 59617 columns in 250 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xmtA/nostruct-align/1xmtA.t05-thin90.a2m.gz # 1xmtA.t05-thin90.a2m with 119 sequences, total weight= 65.5441 avg weight= 0.550791 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30041 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xmtA/info/1xmtA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xmtA/nostruct-align/1xmtA.t05-thin90.a2m.gz, have 59712 columns in 251 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rx0A/nostruct-align/1rx0A.t05-thin90.a2m.gz # 1rx0A.t05-thin90.a2m with 2398 sequences, total weight= 2398 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15192 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rx0A/info/1rx0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rx0A/nostruct-align/1rx0A.t05-thin90.a2m.gz, have 60096 columns in 252 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p99A/nostruct-align/1p99A.t05-thin90.a2m.gz # 1p99A.t05-thin90.a2m with 841 sequences, total weight= 841 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03114 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p99A/info/1p99A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p99A/nostruct-align/1p99A.t05-thin90.a2m.gz, have 60351 columns in 253 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2l/2lisA/nostruct-align/2lisA.t05-thin90.a2m.gz # 2lisA.t05-thin90.a2m with 29 sequences, total weight= 11.163 avg weight= 0.384929 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2l/2lisA/info/2lisA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2l/2lisA/nostruct-align/2lisA.t05-thin90.a2m.gz, have 60482 columns in 254 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vfyA/nostruct-align/1vfyA.t05-thin90.a2m.gz # 1vfyA.t05-thin90.a2m with 404 sequences, total weight= 71.1291 avg weight= 0.176062 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30615 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vfyA/info/1vfyA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vfyA/nostruct-align/1vfyA.t05-thin90.a2m.gz, have 60549 columns in 255 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h72C/nostruct-align/1h72C.t05-thin90.a2m.gz # 1h72C.t05-thin90.a2m with 1004 sequences, total weight= 1004 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.978875 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h72C/info/1h72C.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h72C/nostruct-align/1h72C.t05-thin90.a2m.gz, have 60845 columns in 256 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1olrA/nostruct-align/1olrA.t05-thin90.a2m.gz # 1olrA.t05-thin90.a2m with 64 sequences, total weight= 34.5976 avg weight= 0.540588 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1olrA/info/1olrA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1olrA/nostruct-align/1olrA.t05-thin90.a2m.gz, have 61069 columns in 257 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nycA/nostruct-align/1nycA.t05-thin90.a2m.gz # 1nycA.t05-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04307 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nycA/info/1nycA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nycA/nostruct-align/1nycA.t05-thin90.a2m.gz, have 61180 columns in 258 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gs5A/nostruct-align/1gs5A.t05-thin90.a2m.gz # 1gs5A.t05-thin90.a2m with 1222 sequences, total weight= 1222 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17965 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gs5A/info/1gs5A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gs5A/nostruct-align/1gs5A.t05-thin90.a2m.gz, have 61438 columns in 259 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h5uA/nostruct-align/1h5uA.t05-thin90.a2m.gz # 1h5uA.t05-thin90.a2m with 450 sequences, total weight= 102.586 avg weight= 0.227969 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30113 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h5uA/info/1h5uA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h5uA/nostruct-align/1h5uA.t05-thin90.a2m.gz, have 62249 columns in 260 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lfwA/nostruct-align/1lfwA.t05-thin90.a2m.gz # 1lfwA.t05-thin90.a2m with 1918 sequences, total weight= 1918 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.96866 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lfwA/info/1lfwA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lfwA/nostruct-align/1lfwA.t05-thin90.a2m.gz, have 62717 columns in 261 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t05-thin90.a2m.gz # 7odcA.t05-thin90.a2m with 964 sequences, total weight= 964 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12398 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/7o/7odcA/info/7odcA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t05-thin90.a2m.gz, have 63104 columns in 262 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rm6A/nostruct-align/1rm6A.t05-thin90.a2m.gz # 1rm6A.t05-thin90.a2m with 629 sequences, total weight= 351.846 avg weight= 0.559373 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.307 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rm6A/info/1rm6A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rm6A/nostruct-align/1rm6A.t05-thin90.a2m.gz, have 63865 columns in 263 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pa7A/nostruct-align/1pa7A.t05-thin90.a2m.gz # 1pa7A.t05-thin90.a2m with 79 sequences, total weight= 17.7664 avg weight= 0.224891 31 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pa7A/info/1pa7A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pa7A/nostruct-align/1pa7A.t05-thin90.a2m.gz, have 63995 columns in 264 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d8wA/nostruct-align/1d8wA.t05-thin90.a2m.gz # 1d8wA.t05-thin90.a2m with 168 sequences, total weight= 168 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27874 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d8wA/info/1d8wA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d8wA/nostruct-align/1d8wA.t05-thin90.a2m.gz, have 64397 columns in 265 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bteA/nostruct-align/1bteA.t05-thin90.a2m.gz # 1bteA.t05-thin90.a2m with 36 sequences, total weight= 29.2187 avg weight= 0.811631 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bteA/info/1bteA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bteA/nostruct-align/1bteA.t05-thin90.a2m.gz, have 64489 columns in 266 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kt6A/nostruct-align/1kt6A.t05-thin90.a2m.gz # 1kt6A.t05-thin90.a2m with 452 sequences, total weight= 452 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.967641 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kt6A/info/1kt6A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kt6A/nostruct-align/1kt6A.t05-thin90.a2m.gz, have 64664 columns in 267 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mof/nostruct-align/1mof.t05-thin90.a2m.gz # 1mof.t05-thin90.a2m with 43 sequences, total weight= 6.01461 avg weight= 0.139875 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mof/info/1mof.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mof/nostruct-align/1mof.t05-thin90.a2m.gz, have 64717 columns in 268 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vjoA/nostruct-align/1vjoA.t05-thin90.a2m.gz # 1vjoA.t05-thin90.a2m with 8380 sequences, total weight= 8380 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.822251 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vjoA/info/1vjoA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vjoA/nostruct-align/1vjoA.t05-thin90.a2m.gz, have 65094 columns in 269 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mqvA/nostruct-align/1mqvA.t05-thin90.a2m.gz # 1mqvA.t05-thin90.a2m with 66 sequences, total weight= 50.8726 avg weight= 0.770797 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mqvA/info/1mqvA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mqvA/nostruct-align/1mqvA.t05-thin90.a2m.gz, have 65217 columns in 270 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t0bA/nostruct-align/1t0bA.t05-thin90.a2m.gz # 1t0bA.t05-thin90.a2m with 97 sequences, total weight= 97 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05675 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t0bA/info/1t0bA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t0bA/nostruct-align/1t0bA.t05-thin90.a2m.gz, have 65457 columns in 271 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r45A/nostruct-align/1r45A.t05-thin90.a2m.gz # 1r45A.t05-thin90.a2m with 48 sequences, total weight= 48 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20262 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r45A/info/1r45A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r45A/nostruct-align/1r45A.t05-thin90.a2m.gz, have 65658 columns in 272 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3h/3htsB/nostruct-align/3htsB.t05-thin90.a2m.gz # 3htsB.t05-thin90.a2m with 187 sequences, total weight= 27.4131 avg weight= 0.146594 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3h/3htsB/info/3htsB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/3h/3htsB/nostruct-align/3htsB.t05-thin90.a2m.gz, have 65740 columns in 273 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c75A/nostruct-align/1c75A.t05-thin90.a2m.gz # 1c75A.t05-thin90.a2m with 743 sequences, total weight= 363.567 avg weight= 0.489322 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31484 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c75A/info/1c75A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1c75A/nostruct-align/1c75A.t05-thin90.a2m.gz, have 65811 columns in 274 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yleA/nostruct-align/1yleA.t05-thin90.a2m.gz # 1yleA.t05-thin90.a2m with 54 sequences, total weight= 9.65664 avg weight= 0.178827 31 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yleA/info/1yleA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1yleA/nostruct-align/1yleA.t05-thin90.a2m.gz, have 66141 columns in 275 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vknA/nostruct-align/1vknA.t05-thin90.a2m.gz # 1vknA.t05-thin90.a2m with 1752 sequences, total weight= 1752 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23682 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vknA/info/1vknA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vknA/nostruct-align/1vknA.t05-thin90.a2m.gz, have 66481 columns in 276 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dg6A/nostruct-align/1dg6A.t05-thin90.a2m.gz # 1dg6A.t05-thin90.a2m with 176 sequences, total weight= 176 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28968 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dg6A/info/1dg6A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dg6A/nostruct-align/1dg6A.t05-thin90.a2m.gz, have 66630 columns in 277 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a62/nostruct-align/1a62.t05-thin90.a2m.gz # 1a62.t05-thin90.a2m with 143 sequences, total weight= 12.4463 avg weight= 0.0870372 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a62/info/1a62.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1a62/nostruct-align/1a62.t05-thin90.a2m.gz, have 66755 columns in 278 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m55A/nostruct-align/1m55A.t05-thin90.a2m.gz # 1m55A.t05-thin90.a2m with 12 sequences, total weight= 12 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22207 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m55A/info/1m55A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m55A/nostruct-align/1m55A.t05-thin90.a2m.gz, have 66948 columns in 279 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bgc/nostruct-align/1bgc.t05-thin90.a2m.gz # 1bgc.t05-thin90.a2m with 59 sequences, total weight= 26.4178 avg weight= 0.447759 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bgc/info/1bgc.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bgc/nostruct-align/1bgc.t05-thin90.a2m.gz, have 67106 columns in 280 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tu7A/nostruct-align/1tu7A.t05-thin90.a2m.gz # 1tu7A.t05-thin90.a2m with 2588 sequences, total weight= 2588 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.999597 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tu7A/info/1tu7A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tu7A/nostruct-align/1tu7A.t05-thin90.a2m.gz, have 67314 columns in 281 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qxyA/nostruct-align/1qxyA.t05-thin90.a2m.gz # 1qxyA.t05-thin90.a2m with 1276 sequences, total weight= 1276 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18688 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qxyA/info/1qxyA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qxyA/nostruct-align/1qxyA.t05-thin90.a2m.gz, have 67563 columns in 282 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1shuX/nostruct-align/1shuX.t05-thin90.a2m.gz # 1shuX.t05-thin90.a2m with 1976 sequences, total weight= 1976 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.955318 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1shuX/info/1shuX.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1shuX/nostruct-align/1shuX.t05-thin90.a2m.gz, have 67744 columns in 283 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f9zA/nostruct-align/1f9zA.t05-thin90.a2m.gz # 1f9zA.t05-thin90.a2m with 2607 sequences, total weight= 2607 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.886827 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f9zA/info/1f9zA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f9zA/nostruct-align/1f9zA.t05-thin90.a2m.gz, have 67872 columns in 284 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h8uA/nostruct-align/1h8uA.t05-thin90.a2m.gz # 1h8uA.t05-thin90.a2m with 1966 sequences, total weight= 1966 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05586 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h8uA/info/1h8uA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h8uA/nostruct-align/1h8uA.t05-thin90.a2m.gz, have 67987 columns in 285 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uoyA/nostruct-align/1uoyA.t05-thin90.a2m.gz # 1uoyA.t05-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15982 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uoyA/info/1uoyA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uoyA/nostruct-align/1uoyA.t05-thin90.a2m.gz, have 68051 columns in 286 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j54A/nostruct-align/1j54A.t05-thin90.a2m.gz # 1j54A.t05-thin90.a2m with 1075 sequences, total weight= 1075 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0693 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j54A/info/1j54A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j54A/nostruct-align/1j54A.t05-thin90.a2m.gz, have 68225 columns in 287 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rkiA/nostruct-align/1rkiA.t05-thin90.a2m.gz # 1rkiA.t05-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.625635 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rkiA/info/1rkiA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rkiA/nostruct-align/1rkiA.t05-thin90.a2m.gz, have 68326 columns in 288 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1ji7A/nostruct-align/1ji7A.t05-thin90.a2m.gz # 1ji7A.t05-thin90.a2m with 95 sequences, total weight= 46.8238 avg weight= 0.492882 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1ji7A/info/1ji7A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1ji7A/nostruct-align/1ji7A.t05-thin90.a2m.gz, have 68403 columns in 289 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wd3A/nostruct-align/1wd3A.t05-thin90.a2m.gz # 1wd3A.t05-thin90.a2m with 64 sequences, total weight= 64 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29849 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wd3A/info/1wd3A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wd3A/nostruct-align/1wd3A.t05-thin90.a2m.gz, have 68885 columns in 290 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q74A/nostruct-align/1q74A.t05-thin90.a2m.gz # 1q74A.t05-thin90.a2m with 308 sequences, total weight= 308 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0156 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q74A/info/1q74A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q74A/nostruct-align/1q74A.t05-thin90.a2m.gz, have 69172 columns in 291 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r7aA/nostruct-align/1r7aA.t05-thin90.a2m.gz # 1r7aA.t05-thin90.a2m with 1800 sequences, total weight= 1800 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00682 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r7aA/info/1r7aA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r7aA/nostruct-align/1r7aA.t05-thin90.a2m.gz, have 69676 columns in 292 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wd7A/nostruct-align/1wd7A.t05-thin90.a2m.gz # 1wd7A.t05-thin90.a2m with 320 sequences, total weight= 320 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09022 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wd7A/info/1wd7A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wd7A/nostruct-align/1wd7A.t05-thin90.a2m.gz, have 69930 columns in 293 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sc3A/nostruct-align/1sc3A.t05-thin90.a2m.gz # 1sc3A.t05-thin90.a2m with 256 sequences, total weight= 202.495 avg weight= 0.790997 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30231 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sc3A/info/1sc3A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sc3A/nostruct-align/1sc3A.t05-thin90.a2m.gz, have 70103 columns in 294 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jyhA/nostruct-align/1jyhA.t05-thin90.a2m.gz # 1jyhA.t05-thin90.a2m with 251 sequences, total weight= 251 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.998713 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jyhA/info/1jyhA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jyhA/nostruct-align/1jyhA.t05-thin90.a2m.gz, have 70258 columns in 295 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m9zA/nostruct-align/1m9zA.t05-thin90.a2m.gz # 1m9zA.t05-thin90.a2m with 15 sequences, total weight= 4.57097 avg weight= 0.304732 20 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m9zA/info/1m9zA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m9zA/nostruct-align/1m9zA.t05-thin90.a2m.gz, have 70363 columns in 296 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54A/nostruct-align/1v54A.t05-thin90.a2m.gz # 1v54A.t05-thin90.a2m with 1987 sequences, total weight= 34.9377 avg weight= 0.0175831 42 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54A/info/1v54A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v54A/nostruct-align/1v54A.t05-thin90.a2m.gz, have 70877 columns in 297 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wddS/nostruct-align/1wddS.t05-thin90.a2m.gz # 1wddS.t05-thin90.a2m with 197 sequences, total weight= 11.3376 avg weight= 0.0575514 31 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wddS/info/1wddS.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wddS/nostruct-align/1wddS.t05-thin90.a2m.gz, have 70999 columns in 298 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1udzA/nostruct-align/1udzA.t05-thin90.a2m.gz # 1udzA.t05-thin90.a2m with 997 sequences, total weight= 373.273 avg weight= 0.374396 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31782 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1udzA/info/1udzA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1udzA/nostruct-align/1udzA.t05-thin90.a2m.gz, have 71178 columns in 299 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1luzA/nostruct-align/1luzA.t05-thin90.a2m.gz # 1luzA.t05-thin90.a2m with 12 sequences, total weight= 7.01789 avg weight= 0.584824 20 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1luzA/info/1luzA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1luzA/nostruct-align/1luzA.t05-thin90.a2m.gz, have 71263 columns in 300 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dc1A/nostruct-align/1dc1A.t05-thin90.a2m.gz # 1dc1A.t05-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14377 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dc1A/info/1dc1A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dc1A/nostruct-align/1dc1A.t05-thin90.a2m.gz, have 71573 columns in 301 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rdqE/nostruct-align/1rdqE.t05-thin90.a2m.gz # 1rdqE.t05-thin90.a2m with 14224 sequences, total weight= 14224 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.974321 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rdqE/info/1rdqE.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rdqE/nostruct-align/1rdqE.t05-thin90.a2m.gz, have 71915 columns in 302 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ye8A/nostruct-align/1ye8A.t05-thin90.a2m.gz # 1ye8A.t05-thin90.a2m with 4155 sequences, total weight= 4155 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07584 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ye8A/info/1ye8A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1ye8A/nostruct-align/1ye8A.t05-thin90.a2m.gz, have 72087 columns in 303 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rliA/nostruct-align/1rliA.t05-thin90.a2m.gz # 1rliA.t05-thin90.a2m with 1316 sequences, total weight= 1316 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.965467 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rliA/info/1rliA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rliA/nostruct-align/1rliA.t05-thin90.a2m.gz, have 72243 columns in 304 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t05-thin90.a2m.gz # 1dosA.t05-thin90.a2m with 312 sequences, total weight= 52.2902 avg weight= 0.167597 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dosA/info/1dosA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t05-thin90.a2m.gz, have 72601 columns in 305 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fm0E/nostruct-align/1fm0E.t05-thin90.a2m.gz # 1fm0E.t05-thin90.a2m with 204 sequences, total weight= 35.1344 avg weight= 0.172228 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30032 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fm0E/info/1fm0E.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fm0E/nostruct-align/1fm0E.t05-thin90.a2m.gz, have 72743 columns in 306 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iqzA/nostruct-align/1iqzA.t05-thin90.a2m.gz # 1iqzA.t05-thin90.a2m with 246 sequences, total weight= 246 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2121 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iqzA/info/1iqzA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iqzA/nostruct-align/1iqzA.t05-thin90.a2m.gz, have 72824 columns in 307 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d7pM/nostruct-align/1d7pM.t05-thin90.a2m.gz # 1d7pM.t05-thin90.a2m with 414 sequences, total weight= 71.0272 avg weight= 0.171563 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30155 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d7pM/info/1d7pM.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d7pM/nostruct-align/1d7pM.t05-thin90.a2m.gz, have 72983 columns in 308 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qwoA/nostruct-align/1qwoA.t05-thin90.a2m.gz # 1qwoA.t05-thin90.a2m with 392 sequences, total weight= 392 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.932053 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qwoA/info/1qwoA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qwoA/nostruct-align/1qwoA.t05-thin90.a2m.gz, have 73418 columns in 309 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lst/nostruct-align/1lst.t05-thin90.a2m.gz # 1lst.t05-thin90.a2m with 2183 sequences, total weight= 2183 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.939582 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lst/info/1lst.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lst/nostruct-align/1lst.t05-thin90.a2m.gz, have 73656 columns in 310 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hdkA/nostruct-align/1hdkA.t05-thin90.a2m.gz # 1hdkA.t05-thin90.a2m with 323 sequences, total weight= 323 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2974 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hdkA/info/1hdkA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hdkA/nostruct-align/1hdkA.t05-thin90.a2m.gz, have 73795 columns in 311 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k1eA/nostruct-align/1k1eA.t05-thin90.a2m.gz # 1k1eA.t05-thin90.a2m with 154 sequences, total weight= 69.3766 avg weight= 0.450497 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30034 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k1eA/info/1k1eA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k1eA/nostruct-align/1k1eA.t05-thin90.a2m.gz, have 73972 columns in 312 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hft/nostruct-align/2hft.t05-thin90.a2m.gz # 2hft.t05-thin90.a2m with 427 sequences, total weight= 427 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0206 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hft/info/2hft.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2h/2hft/nostruct-align/2hft.t05-thin90.a2m.gz, have 74177 columns in 313 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bkf/nostruct-align/1bkf.t05-thin90.a2m.gz # 1bkf.t05-thin90.a2m with 782 sequences, total weight= 86.8342 avg weight= 0.111041 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30471 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bkf/info/1bkf.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bkf/nostruct-align/1bkf.t05-thin90.a2m.gz, have 74284 columns in 314 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m22A/nostruct-align/1m22A.t05-thin90.a2m.gz # 1m22A.t05-thin90.a2m with 977 sequences, total weight= 977 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2905 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m22A/info/1m22A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m22A/nostruct-align/1m22A.t05-thin90.a2m.gz, have 74771 columns in 315 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ew6A/nostruct-align/1ew6A.t05-thin90.a2m.gz # 1ew6A.t05-thin90.a2m with 610 sequences, total weight= 610 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2379 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ew6A/info/1ew6A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ew6A/nostruct-align/1ew6A.t05-thin90.a2m.gz, have 74908 columns in 316 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nacA/nostruct-align/2nacA.t05-thin90.a2m.gz # 2nacA.t05-thin90.a2m with 1559 sequences, total weight= 1559 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22798 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nacA/info/2nacA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2n/2nacA/nostruct-align/2nacA.t05-thin90.a2m.gz, have 75282 columns in 317 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h97A/nostruct-align/1h97A.t05-thin90.a2m.gz # 1h97A.t05-thin90.a2m with 765 sequences, total weight= 765 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29217 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h97A/info/1h97A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h97A/nostruct-align/1h97A.t05-thin90.a2m.gz, have 75429 columns in 318 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vd5A/nostruct-align/1vd5A.t05-thin90.a2m.gz # 1vd5A.t05-thin90.a2m with 371 sequences, total weight= 371 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.873461 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vd5A/info/1vd5A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vd5A/nostruct-align/1vd5A.t05-thin90.a2m.gz, have 75806 columns in 319 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dp7P/nostruct-align/1dp7P.t05-thin90.a2m.gz # 1dp7P.t05-thin90.a2m with 53 sequences, total weight= 10.915 avg weight= 0.205944 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dp7P/info/1dp7P.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dp7P/nostruct-align/1dp7P.t05-thin90.a2m.gz, have 75882 columns in 320 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sj1A/nostruct-align/1sj1A.t05-thin90.a2m.gz # 1sj1A.t05-thin90.a2m with 219 sequences, total weight= 76.2585 avg weight= 0.348212 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30177 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sj1A/info/1sj1A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sj1A/nostruct-align/1sj1A.t05-thin90.a2m.gz, have 75948 columns in 321 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rz2A/nostruct-align/1rz2A.t05-thin90.a2m.gz # 1rz2A.t05-thin90.a2m with 12 sequences, total weight= 9.51712 avg weight= 0.793093 20 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rz2A/info/1rz2A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rz2A/nostruct-align/1rz2A.t05-thin90.a2m.gz, have 76162 columns in 322 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tkeA/nostruct-align/1tkeA.t05-thin90.a2m.gz # 1tkeA.t05-thin90.a2m with 724 sequences, total weight= 301.522 avg weight= 0.416467 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31084 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tkeA/info/1tkeA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tkeA/nostruct-align/1tkeA.t05-thin90.a2m.gz, have 76386 columns in 323 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rhs/nostruct-align/1rhs.t05-thin90.a2m.gz # 1rhs.t05-thin90.a2m with 1465 sequences, total weight= 1465 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.998913 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rhs/info/1rhs.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rhs/nostruct-align/1rhs.t05-thin90.a2m.gz, have 76679 columns in 324 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iooA/nostruct-align/1iooA.t05-thin90.a2m.gz # 1iooA.t05-thin90.a2m with 551 sequences, total weight= 343.518 avg weight= 0.623445 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30691 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iooA/info/1iooA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iooA/nostruct-align/1iooA.t05-thin90.a2m.gz, have 76875 columns in 325 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k3xA/nostruct-align/1k3xA.t05-thin90.a2m.gz # 1k3xA.t05-thin90.a2m with 322 sequences, total weight= 69.6238 avg weight= 0.216223 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30178 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k3xA/info/1k3xA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k3xA/nostruct-align/1k3xA.t05-thin90.a2m.gz, have 77128 columns in 326 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rjoA/nostruct-align/1rjoA.t05-thin90.a2m.gz # 1rjoA.t05-thin90.a2m with 145 sequences, total weight= 47.0258 avg weight= 0.324316 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rjoA/info/1rjoA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rjoA/nostruct-align/1rjoA.t05-thin90.a2m.gz, have 77748 columns in 327 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h75A/nostruct-align/1h75A.t05-thin90.a2m.gz # 1h75A.t05-thin90.a2m with 1281 sequences, total weight= 1281 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20569 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h75A/info/1h75A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h75A/nostruct-align/1h75A.t05-thin90.a2m.gz, have 77824 columns in 328 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oqvA/nostruct-align/1oqvA.t05-thin90.a2m.gz # 1oqvA.t05-thin90.a2m with 15 sequences, total weight= 5.47838 avg weight= 0.365225 19 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oqvA/info/1oqvA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oqvA/nostruct-align/1oqvA.t05-thin90.a2m.gz, have 77995 columns in 329 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w53A/nostruct-align/1w53A.t05-thin90.a2m.gz # 1w53A.t05-thin90.a2m with 7 sequences, total weight= 4.16557 avg weight= 0.595082 15 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w53A/info/1w53A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w53A/nostruct-align/1w53A.t05-thin90.a2m.gz, have 78079 columns in 330 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n08A/nostruct-align/1n08A.t05-thin90.a2m.gz # 1n08A.t05-thin90.a2m with 280 sequences, total weight= 49.5791 avg weight= 0.177068 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30096 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n08A/info/1n08A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n08A/nostruct-align/1n08A.t05-thin90.a2m.gz, have 78233 columns in 331 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uzbA/nostruct-align/1uzbA.t05-thin90.a2m.gz # 1uzbA.t05-thin90.a2m with 3057 sequences, total weight= 3057 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27751 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uzbA/info/1uzbA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uzbA/nostruct-align/1uzbA.t05-thin90.a2m.gz, have 78749 columns in 332 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1isuA/nostruct-align/1isuA.t05-thin90.a2m.gz # 1isuA.t05-thin90.a2m with 31 sequences, total weight= 11.5196 avg weight= 0.371601 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1isuA/info/1isuA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1isuA/nostruct-align/1isuA.t05-thin90.a2m.gz, have 78811 columns in 333 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yc9A/nostruct-align/1yc9A.t05-thin90.a2m.gz # 1yc9A.t05-thin90.a2m with 1207 sequences, total weight= 1207 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.978834 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yc9A/info/1yc9A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1yc9A/nostruct-align/1yc9A.t05-thin90.a2m.gz, have 79222 columns in 334 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cl8A/nostruct-align/1cl8A.t05-thin90.a2m.gz # 1cl8A.t05-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05471 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cl8A/info/1cl8A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cl8A/nostruct-align/1cl8A.t05-thin90.a2m.gz, have 79483 columns in 335 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qtwA/nostruct-align/1qtwA.t05-thin90.a2m.gz # 1qtwA.t05-thin90.a2m with 960 sequences, total weight= 960 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.91592 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qtwA/info/1qtwA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qtwA/nostruct-align/1qtwA.t05-thin90.a2m.gz, have 79768 columns in 336 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uwcA/nostruct-align/1uwcA.t05-thin90.a2m.gz # 1uwcA.t05-thin90.a2m with 1012 sequences, total weight= 1012 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.79225 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uwcA/info/1uwcA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uwcA/nostruct-align/1uwcA.t05-thin90.a2m.gz, have 80029 columns in 337 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o7jA/nostruct-align/1o7jA.t05-thin90.a2m.gz # 1o7jA.t05-thin90.a2m with 266 sequences, total weight= 79.2631 avg weight= 0.297982 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30181 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o7jA/info/1o7jA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o7jA/nostruct-align/1o7jA.t05-thin90.a2m.gz, have 80354 columns in 338 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uvqA/nostruct-align/1uvqA.t05-thin90.a2m.gz # 1uvqA.t05-thin90.a2m with 2849 sequences, total weight= 2849 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12673 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uvqA/info/1uvqA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uvqA/nostruct-align/1uvqA.t05-thin90.a2m.gz, have 80536 columns in 339 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lo7A/nostruct-align/1lo7A.t05-thin90.a2m.gz # 1lo7A.t05-thin90.a2m with 893 sequences, total weight= 893 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.985353 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lo7A/info/1lo7A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lo7A/nostruct-align/1lo7A.t05-thin90.a2m.gz, have 80676 columns in 340 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xtyA/nostruct-align/1xtyA.t05-thin90.a2m.gz # 1xtyA.t05-thin90.a2m with 106 sequences, total weight= 21.9927 avg weight= 0.207478 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xtyA/info/1xtyA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xtyA/nostruct-align/1xtyA.t05-thin90.a2m.gz, have 80796 columns in 341 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sg4A/nostruct-align/1sg4A.t05-thin90.a2m.gz # 1sg4A.t05-thin90.a2m with 2098 sequences, total weight= 2098 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18346 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sg4A/info/1sg4A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sg4A/nostruct-align/1sg4A.t05-thin90.a2m.gz, have 81045 columns in 342 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1juvA/nostruct-align/1juvA.t05-thin90.a2m.gz # 1juvA.t05-thin90.a2m with 409 sequences, total weight= 409 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25423 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1juvA/info/1juvA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1juvA/nostruct-align/1juvA.t05-thin90.a2m.gz, have 81238 columns in 343 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d1qA/nostruct-align/1d1qA.t05-thin90.a2m.gz # 1d1qA.t05-thin90.a2m with 523 sequences, total weight= 483.436 avg weight= 0.924352 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30138 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d1qA/info/1d1qA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d1qA/nostruct-align/1d1qA.t05-thin90.a2m.gz, have 81397 columns in 344 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e0cA/nostruct-align/1e0cA.t05-thin90.a2m.gz # 1e0cA.t05-thin90.a2m with 1653 sequences, total weight= 1653 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.975247 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e0cA/info/1e0cA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e0cA/nostruct-align/1e0cA.t05-thin90.a2m.gz, have 81668 columns in 345 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qtnB/nostruct-align/1qtnB.t05-thin90.a2m.gz # 1qtnB.t05-thin90.a2m with 156 sequences, total weight= 38.5536 avg weight= 0.247138 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qtnB/info/1qtnB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qtnB/nostruct-align/1qtnB.t05-thin90.a2m.gz, have 81758 columns in 346 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n3lA/nostruct-align/1n3lA.t05-thin90.a2m.gz # 1n3lA.t05-thin90.a2m with 767 sequences, total weight= 767 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23734 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n3lA/info/1n3lA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n3lA/nostruct-align/1n3lA.t05-thin90.a2m.gz, have 82090 columns in 347 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1us0A/nostruct-align/1us0A.t05-thin90.a2m.gz # 1us0A.t05-thin90.a2m with 2019 sequences, total weight= 2019 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2618 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1us0A/info/1us0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1us0A/nostruct-align/1us0A.t05-thin90.a2m.gz, have 82403 columns in 348 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i0dA/nostruct-align/1i0dA.t05-thin90.a2m.gz # 1i0dA.t05-thin90.a2m with 1052 sequences, total weight= 1052 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.936569 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i0dA/info/1i0dA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i0dA/nostruct-align/1i0dA.t05-thin90.a2m.gz, have 82734 columns in 349 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q7eA/nostruct-align/1q7eA.t05-thin90.a2m.gz # 1q7eA.t05-thin90.a2m with 773 sequences, total weight= 178.963 avg weight= 0.231518 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30937 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q7eA/info/1q7eA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q7eA/nostruct-align/1q7eA.t05-thin90.a2m.gz, have 83144 columns in 350 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1txgA/nostruct-align/1txgA.t05-thin90.a2m.gz # 1txgA.t05-thin90.a2m with 4596 sequences, total weight= 4596 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.8409 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1txgA/info/1txgA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1txgA/nostruct-align/1txgA.t05-thin90.a2m.gz, have 83479 columns in 351 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xkiA/nostruct-align/1xkiA.t05-thin90.a2m.gz # 1xkiA.t05-thin90.a2m with 348 sequences, total weight= 348 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05655 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xkiA/info/1xkiA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xkiA/nostruct-align/1xkiA.t05-thin90.a2m.gz, have 83607 columns in 352 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nwaA/nostruct-align/1nwaA.t05-thin90.a2m.gz # 1nwaA.t05-thin90.a2m with 415 sequences, total weight= 21.4211 avg weight= 0.0516171 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nwaA/info/1nwaA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nwaA/nostruct-align/1nwaA.t05-thin90.a2m.gz, have 83775 columns in 353 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wp5A/nostruct-align/1wp5A.t05-thin90.a2m.gz # 1wp5A.t05-thin90.a2m with 402 sequences, total weight= 173.422 avg weight= 0.431399 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30604 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wp5A/info/1wp5A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wp5A/nostruct-align/1wp5A.t05-thin90.a2m.gz, have 84098 columns in 354 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r5lA/nostruct-align/1r5lA.t05-thin90.a2m.gz # 1r5lA.t05-thin90.a2m with 566 sequences, total weight= 566 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.989558 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r5lA/info/1r5lA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r5lA/nostruct-align/1r5lA.t05-thin90.a2m.gz, have 84349 columns in 355 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rc9A/nostruct-align/1rc9A.t05-thin90.a2m.gz # 1rc9A.t05-thin90.a2m with 577 sequences, total weight= 577 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1771 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rc9A/info/1rc9A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rc9A/nostruct-align/1rc9A.t05-thin90.a2m.gz, have 84570 columns in 356 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54E/nostruct-align/1v54E.t05-thin90.a2m.gz # 1v54E.t05-thin90.a2m with 26 sequences, total weight= 4.91204 avg weight= 0.188925 20 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54E/info/1v54E.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v54E/nostruct-align/1v54E.t05-thin90.a2m.gz, have 84675 columns in 357 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1odzA/nostruct-align/1odzA.t05-thin90.a2m.gz # 1odzA.t05-thin90.a2m with 82 sequences, total weight= 82 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02496 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1odzA/info/1odzA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1odzA/nostruct-align/1odzA.t05-thin90.a2m.gz, have 85054 columns in 358 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kw3B/nostruct-align/1kw3B.t05-thin90.a2m.gz # 1kw3B.t05-thin90.a2m with 1758 sequences, total weight= 1758 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.983909 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kw3B/info/1kw3B.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kw3B/nostruct-align/1kw3B.t05-thin90.a2m.gz, have 85342 columns in 359 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ug6A/nostruct-align/1ug6A.t05-thin90.a2m.gz # 1ug6A.t05-thin90.a2m with 680 sequences, total weight= 83.4614 avg weight= 0.122737 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30255 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ug6A/info/1ug6A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ug6A/nostruct-align/1ug6A.t05-thin90.a2m.gz, have 85768 columns in 360 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oi2A/nostruct-align/1oi2A.t05-thin90.a2m.gz # 1oi2A.t05-thin90.a2m with 160 sequences, total weight= 15.6128 avg weight= 0.09758 41 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oi2A/info/1oi2A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oi2A/nostruct-align/1oi2A.t05-thin90.a2m.gz, have 86104 columns in 361 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p5vA/nostruct-align/1p5vA.t05-thin90.a2m.gz # 1p5vA.t05-thin90.a2m with 226 sequences, total weight= 184.467 avg weight= 0.816226 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30086 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p5vA/info/1p5vA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p5vA/nostruct-align/1p5vA.t05-thin90.a2m.gz, have 86295 columns in 362 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gudA/nostruct-align/1gudA.t05-thin90.a2m.gz # 1gudA.t05-thin90.a2m with 2050 sequences, total weight= 2050 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.928218 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gudA/info/1gudA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gudA/nostruct-align/1gudA.t05-thin90.a2m.gz, have 86583 columns in 363 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cmcA/nostruct-align/1cmcA.t05-thin90.a2m.gz # 1cmcA.t05-thin90.a2m with 13 sequences, total weight= 2.38786 avg weight= 0.183682 11 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cmcA/info/1cmcA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cmcA/nostruct-align/1cmcA.t05-thin90.a2m.gz, have 86687 columns in 364 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k7iA/nostruct-align/1k7iA.t05-thin90.a2m.gz # 1k7iA.t05-thin90.a2m with 1567 sequences, total weight= 1567 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13248 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k7iA/info/1k7iA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k7iA/nostruct-align/1k7iA.t05-thin90.a2m.gz, have 87149 columns in 365 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a8o/nostruct-align/1a8o.t05-thin90.a2m.gz # 1a8o.t05-thin90.a2m with 131 sequences, total weight= 7.79948 avg weight= 0.059538 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a8o/info/1a8o.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1a8o/nostruct-align/1a8o.t05-thin90.a2m.gz, have 87219 columns in 366 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o54A/nostruct-align/1o54A.t05-thin90.a2m.gz # 1o54A.t05-thin90.a2m with 11880 sequences, total weight= 11880 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.667064 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o54A/info/1o54A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o54A/nostruct-align/1o54A.t05-thin90.a2m.gz, have 87484 columns in 367 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gxmA/nostruct-align/1gxmA.t05-thin90.a2m.gz # 1gxmA.t05-thin90.a2m with 207 sequences, total weight= 207 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21709 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gxmA/info/1gxmA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gxmA/nostruct-align/1gxmA.t05-thin90.a2m.gz, have 87808 columns in 368 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fdn/nostruct-align/2fdn.t05-thin90.a2m.gz # 2fdn.t05-thin90.a2m with 277 sequences, total weight= 16.6013 avg weight= 0.0599325 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fdn/info/2fdn.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2f/2fdn/nostruct-align/2fdn.t05-thin90.a2m.gz, have 87863 columns in 369 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g55A/nostruct-align/1g55A.t05-thin90.a2m.gz # 1g55A.t05-thin90.a2m with 548 sequences, total weight= 548 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07135 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g55A/info/1g55A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g55A/nostruct-align/1g55A.t05-thin90.a2m.gz, have 88176 columns in 370 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l6xA/nostruct-align/1l6xA.t05-thin90.a2m.gz # 1l6xA.t05-thin90.a2m with 5649 sequences, total weight= 115.949 avg weight= 0.0205256 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31319 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l6xA/info/1l6xA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1l6xA/nostruct-align/1l6xA.t05-thin90.a2m.gz, have 88383 columns in 371 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1smbA/nostruct-align/1smbA.t05-thin90.a2m.gz # 1smbA.t05-thin90.a2m with 562 sequences, total weight= 562 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25344 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1smbA/info/1smbA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1smbA/nostruct-align/1smbA.t05-thin90.a2m.gz, have 88532 columns in 372 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qjpA/nostruct-align/1qjpA.t05-thin90.a2m.gz # 1qjpA.t05-thin90.a2m with 284 sequences, total weight= 284 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24112 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qjpA/info/1qjpA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qjpA/nostruct-align/1qjpA.t05-thin90.a2m.gz, have 88669 columns in 373 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wddA/nostruct-align/1wddA.t05-thin90.a2m.gz # 1wddA.t05-thin90.a2m with 878 sequences, total weight= 19.0465 avg weight= 0.021693 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wddA/info/1wddA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wddA/nostruct-align/1wddA.t05-thin90.a2m.gz, have 89134 columns in 374 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ufyA/nostruct-align/1ufyA.t05-thin90.a2m.gz # 1ufyA.t05-thin90.a2m with 40 sequences, total weight= 7.11228 avg weight= 0.177807 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ufyA/info/1ufyA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ufyA/nostruct-align/1ufyA.t05-thin90.a2m.gz, have 89255 columns in 375 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ouwA/nostruct-align/1ouwA.t05-thin90.a2m.gz # 1ouwA.t05-thin90.a2m with 241 sequences, total weight= 94.4772 avg weight= 0.392022 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3015 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ouwA/info/1ouwA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ouwA/nostruct-align/1ouwA.t05-thin90.a2m.gz, have 89404 columns in 376 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oksA/nostruct-align/1oksA.t05-thin90.a2m.gz # 1oksA.t05-thin90.a2m with 5 sequences, total weight= 3.01005 avg weight= 0.60201 9 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oksA/info/1oksA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oksA/nostruct-align/1oksA.t05-thin90.a2m.gz, have 89457 columns in 377 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mk0A/nostruct-align/1mk0A.t05-thin90.a2m.gz # 1mk0A.t05-thin90.a2m with 22 sequences, total weight= 18.9318 avg weight= 0.860538 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mk0A/info/1mk0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mk0A/nostruct-align/1mk0A.t05-thin90.a2m.gz, have 89554 columns in 378 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nnfA/nostruct-align/1nnfA.t05-thin90.a2m.gz # 1nnfA.t05-thin90.a2m with 2166 sequences, total weight= 2166 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.836391 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nnfA/info/1nnfA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nnfA/nostruct-align/1nnfA.t05-thin90.a2m.gz, have 89862 columns in 379 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ummA/nostruct-align/1ummA.t05-thin90.a2m.gz # 1ummA.t05-thin90.a2m with 1573 sequences, total weight= 1573 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.965701 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ummA/info/1ummA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ummA/nostruct-align/1ummA.t05-thin90.a2m.gz, have 90011 columns in 380 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2arcA/nostruct-align/2arcA.t05-thin90.a2m.gz # 2arcA.t05-thin90.a2m with 9 sequences, total weight= 5.3813 avg weight= 0.597922 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2arcA/info/2arcA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2a/2arcA/nostruct-align/2arcA.t05-thin90.a2m.gz, have 90172 columns in 381 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v05A/nostruct-align/1v05A.t05-thin90.a2m.gz # 1v05A.t05-thin90.a2m with 716 sequences, total weight= 353.809 avg weight= 0.494147 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3119 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v05A/info/1v05A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v05A/nostruct-align/1v05A.t05-thin90.a2m.gz, have 90268 columns in 382 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u0fA/nostruct-align/1u0fA.t05-thin90.a2m.gz # 1u0fA.t05-thin90.a2m with 391 sequences, total weight= 62.9533 avg weight= 0.161006 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30039 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u0fA/info/1u0fA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1u0fA/nostruct-align/1u0fA.t05-thin90.a2m.gz, have 90824 columns in 383 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nfp/nostruct-align/1nfp.t05-thin90.a2m.gz # 1nfp.t05-thin90.a2m with 911 sequences, total weight= 911 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11177 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nfp/info/1nfp.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nfp/nostruct-align/1nfp.t05-thin90.a2m.gz, have 91052 columns in 384 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gppA/nostruct-align/1gppA.t05-thin90.a2m.gz # 1gppA.t05-thin90.a2m with 55 sequences, total weight= 55 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28072 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gppA/info/1gppA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gppA/nostruct-align/1gppA.t05-thin90.a2m.gz, have 91269 columns in 385 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i88A/nostruct-align/1i88A.t05-thin90.a2m.gz # 1i88A.t05-thin90.a2m with 890 sequences, total weight= 890 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13843 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i88A/info/1i88A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i88A/nostruct-align/1i88A.t05-thin90.a2m.gz, have 91658 columns in 386 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3c/3cla/nostruct-align/3cla.t05-thin90.a2m.gz # 3cla.t05-thin90.a2m with 609 sequences, total weight= 150.278 avg weight= 0.246762 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3077 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3c/3cla/info/3cla.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/3c/3cla/nostruct-align/3cla.t05-thin90.a2m.gz, have 91871 columns in 387 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iyhA/nostruct-align/1iyhA.t05-thin90.a2m.gz # 1iyhA.t05-thin90.a2m with 2583 sequences, total weight= 2583 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01934 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iyhA/info/1iyhA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iyhA/nostruct-align/1iyhA.t05-thin90.a2m.gz, have 92069 columns in 388 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qgeE/nostruct-align/1qgeE.t05-thin90.a2m.gz # 1qgeE.t05-thin90.a2m with 39 sequences, total weight= 7.65 avg weight= 0.196154 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qgeE/info/1qgeE.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qgeE/nostruct-align/1qgeE.t05-thin90.a2m.gz, have 92166 columns in 389 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eca/nostruct-align/1eca.t05-thin90.a2m.gz # 1eca.t05-thin90.a2m with 967 sequences, total weight= 967 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2596 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eca/info/1eca.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1eca/nostruct-align/1eca.t05-thin90.a2m.gz, have 92302 columns in 390 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p1mA/nostruct-align/1p1mA.t05-thin90.a2m.gz # 1p1mA.t05-thin90.a2m with 2304 sequences, total weight= 2304 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.905706 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p1mA/info/1p1mA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p1mA/nostruct-align/1p1mA.t05-thin90.a2m.gz, have 92706 columns in 391 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54F/nostruct-align/1v54F.t05-thin90.a2m.gz # 1v54F.t05-thin90.a2m with 49 sequences, total weight= 16.996 avg weight= 0.346858 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54F/info/1v54F.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v54F/nostruct-align/1v54F.t05-thin90.a2m.gz, have 92804 columns in 392 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kqwA/nostruct-align/1kqwA.t05-thin90.a2m.gz # 1kqwA.t05-thin90.a2m with 287 sequences, total weight= 52.8602 avg weight= 0.184182 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kqwA/info/1kqwA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kqwA/nostruct-align/1kqwA.t05-thin90.a2m.gz, have 92938 columns in 393 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v5iB/nostruct-align/1v5iB.t05-thin90.a2m.gz # 1v5iB.t05-thin90.a2m with 24 sequences, total weight= 12.9733 avg weight= 0.540554 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v5iB/info/1v5iB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v5iB/nostruct-align/1v5iB.t05-thin90.a2m.gz, have 93014 columns in 394 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1erw/nostruct-align/1erw.t05-thin90.a2m.gz # 1erw.t05-thin90.a2m with 3041 sequences, total weight= 3041 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03661 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1erw/info/1erw.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1erw/nostruct-align/1erw.t05-thin90.a2m.gz, have 93119 columns in 395 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1in6A/nostruct-align/1in6A.t05-thin90.a2m.gz # 1in6A.t05-thin90.a2m with 9864 sequences, total weight= 9864 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.902915 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1in6A/info/1in6A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1in6A/nostruct-align/1in6A.t05-thin90.a2m.gz, have 93419 columns in 396 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p57A/nostruct-align/1p57A.t05-thin90.a2m.gz # 1p57A.t05-thin90.a2m with 6 sequences, total weight= 2.79798 avg weight= 0.46633 10 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p57A/info/1p57A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p57A/nostruct-align/1p57A.t05-thin90.a2m.gz, have 93529 columns in 397 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jetA/nostruct-align/1jetA.t05-thin90.a2m.gz # 1jetA.t05-thin90.a2m with 1456 sequences, total weight= 1456 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05269 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jetA/info/1jetA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jetA/nostruct-align/1jetA.t05-thin90.a2m.gz, have 94046 columns in 398 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gbs/nostruct-align/1gbs.t05-thin90.a2m.gz # 1gbs.t05-thin90.a2m with 590 sequences, total weight= 590 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16034 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gbs/info/1gbs.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gbs/nostruct-align/1gbs.t05-thin90.a2m.gz, have 94231 columns in 399 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vlyA/nostruct-align/1vlyA.t05-thin90.a2m.gz # 1vlyA.t05-thin90.a2m with 628 sequences, total weight= 628 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20091 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vlyA/info/1vlyA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vlyA/nostruct-align/1vlyA.t05-thin90.a2m.gz, have 94554 columns in 400 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vp8A/nostruct-align/1vp8A.t05-thin90.a2m.gz # 1vp8A.t05-thin90.a2m with 10 sequences, total weight= 4.0248 avg weight= 0.40248 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vp8A/info/1vp8A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vp8A/nostruct-align/1vp8A.t05-thin90.a2m.gz, have 94744 columns in 401 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mqkH/nostruct-align/1mqkH.t05-thin90.a2m.gz # 1mqkH.t05-thin90.a2m with 12780 sequences, total weight= 19.9891 avg weight= 0.00156409 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mqkH/info/1mqkH.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mqkH/nostruct-align/1mqkH.t05-thin90.a2m.gz, have 94867 columns in 402 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m7gA/nostruct-align/1m7gA.t05-thin90.a2m.gz # 1m7gA.t05-thin90.a2m with 3355 sequences, total weight= 3355 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.796683 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m7gA/info/1m7gA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m7gA/nostruct-align/1m7gA.t05-thin90.a2m.gz, have 95075 columns in 403 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gkmA/nostruct-align/1gkmA.t05-thin90.a2m.gz # 1gkmA.t05-thin90.a2m with 272 sequences, total weight= 31.5008 avg weight= 0.115812 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gkmA/info/1gkmA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gkmA/nostruct-align/1gkmA.t05-thin90.a2m.gz, have 95584 columns in 404 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oi0A/nostruct-align/1oi0A.t05-thin90.a2m.gz # 1oi0A.t05-thin90.a2m with 222 sequences, total weight= 222 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17449 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oi0A/info/1oi0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oi0A/nostruct-align/1oi0A.t05-thin90.a2m.gz, have 95692 columns in 405 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tu9A/nostruct-align/1tu9A.t05-thin90.a2m.gz # 1tu9A.t05-thin90.a2m with 516 sequences, total weight= 516 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17841 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tu9A/info/1tu9A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tu9A/nostruct-align/1tu9A.t05-thin90.a2m.gz, have 95823 columns in 406 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xzoA/nostruct-align/1xzoA.t05-thin90.a2m.gz # 1xzoA.t05-thin90.a2m with 2987 sequences, total weight= 2987 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0092 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xzoA/info/1xzoA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xzoA/nostruct-align/1xzoA.t05-thin90.a2m.gz, have 95995 columns in 407 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yllA/nostruct-align/1yllA.t05-thin90.a2m.gz # 1yllA.t05-thin90.a2m with 49 sequences, total weight= 48.9346 avg weight= 0.998664 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yllA/info/1yllA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1yllA/nostruct-align/1yllA.t05-thin90.a2m.gz, have 96185 columns in 408 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xmzA/nostruct-align/1xmzA.t05-thin90.a2m.gz # 1xmzA.t05-thin90.a2m with 79 sequences, total weight= 15.7388 avg weight= 0.199225 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xmzA/info/1xmzA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xmzA/nostruct-align/1xmzA.t05-thin90.a2m.gz, have 96409 columns in 409 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1aba/nostruct-align/1aba.t05-thin90.a2m.gz # 1aba.t05-thin90.a2m with 618 sequences, total weight= 380.834 avg weight= 0.616237 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30675 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1aba/info/1aba.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1aba/nostruct-align/1aba.t05-thin90.a2m.gz, have 96496 columns in 410 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i24A/nostruct-align/1i24A.t05-thin90.a2m.gz # 1i24A.t05-thin90.a2m with 10283 sequences, total weight= 10283 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.847563 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i24A/info/1i24A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i24A/nostruct-align/1i24A.t05-thin90.a2m.gz, have 96888 columns in 411 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dk8A/nostruct-align/1dk8A.t05-thin90.a2m.gz # 1dk8A.t05-thin90.a2m with 369 sequences, total weight= 369 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14279 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dk8A/info/1dk8A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dk8A/nostruct-align/1dk8A.t05-thin90.a2m.gz, have 97035 columns in 412 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gttA/nostruct-align/1gttA.t05-thin90.a2m.gz # 1gttA.t05-thin90.a2m with 773 sequences, total weight= 23.7319 avg weight= 0.030701 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gttA/info/1gttA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gttA/nostruct-align/1gttA.t05-thin90.a2m.gz, have 97456 columns in 413 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eokA/nostruct-align/1eokA.t05-thin90.a2m.gz # 1eokA.t05-thin90.a2m with 102 sequences, total weight= 102 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0847 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eokA/info/1eokA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1eokA/nostruct-align/1eokA.t05-thin90.a2m.gz, have 97738 columns in 414 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m6kA/nostruct-align/1m6kA.t05-thin90.a2m.gz # 1m6kA.t05-thin90.a2m with 1608 sequences, total weight= 1608 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10444 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m6kA/info/1m6kA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m6kA/nostruct-align/1m6kA.t05-thin90.a2m.gz, have 97988 columns in 415 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3l/3lzt/nostruct-align/3lzt.t05-thin90.a2m.gz # 3lzt.t05-thin90.a2m with 188 sequences, total weight= 22.838 avg weight= 0.121479 42 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3l/3lzt/info/3lzt.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/3l/3lzt/nostruct-align/3lzt.t05-thin90.a2m.gz, have 98117 columns in 416 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nrjA/nostruct-align/1nrjA.t05-thin90.a2m.gz # 1nrjA.t05-thin90.a2m with 4 sequences, total weight= 3.96601 avg weight= 0.991502 9 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nrjA/info/1nrjA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nrjA/nostruct-align/1nrjA.t05-thin90.a2m.gz, have 98264 columns in 417 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bbkH/nostruct-align/2bbkH.t05-thin90.a2m.gz # 2bbkH.t05-thin90.a2m with 6366 sequences, total weight= 6366 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.73689 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bbkH/info/2bbkH.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2b/2bbkH/nostruct-align/2bbkH.t05-thin90.a2m.gz, have 98619 columns in 418 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1ls1A/nostruct-align/1ls1A.t05-thin90.a2m.gz # 1ls1A.t05-thin90.a2m with 1344 sequences, total weight= 1344 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10527 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1ls1A/info/1ls1A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1ls1A/nostruct-align/1ls1A.t05-thin90.a2m.gz, have 98908 columns in 419 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hp1A/nostruct-align/1hp1A.t05-thin90.a2m.gz # 1hp1A.t05-thin90.a2m with 1079 sequences, total weight= 1079 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.958488 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hp1A/info/1hp1A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hp1A/nostruct-align/1hp1A.t05-thin90.a2m.gz, have 99424 columns in 420 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x6iA/nostruct-align/1x6iA.t05-thin90.a2m.gz # 1x6iA.t05-thin90.a2m with 121 sequences, total weight= 54.6249 avg weight= 0.451446 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30034 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x6iA/info/1x6iA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1x6iA/nostruct-align/1x6iA.t05-thin90.a2m.gz, have 99513 columns in 421 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2t/2tgi/nostruct-align/2tgi.t05-thin90.a2m.gz # 2tgi.t05-thin90.a2m with 399 sequences, total weight= 61.811 avg weight= 0.154915 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30125 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2t/2tgi/info/2tgi.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2t/2tgi/nostruct-align/2tgi.t05-thin90.a2m.gz, have 99625 columns in 422 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gqiA/nostruct-align/1gqiA.t05-thin90.a2m.gz # 1gqiA.t05-thin90.a2m with 27 sequences, total weight= 6.84386 avg weight= 0.253476 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gqiA/info/1gqiA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gqiA/nostruct-align/1gqiA.t05-thin90.a2m.gz, have 100333 columns in 423 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gmiA/nostruct-align/1gmiA.t05-thin90.a2m.gz # 1gmiA.t05-thin90.a2m with 2118 sequences, total weight= 2118 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00564 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gmiA/info/1gmiA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gmiA/nostruct-align/1gmiA.t05-thin90.a2m.gz, have 100468 columns in 424 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h12A/nostruct-align/1h12A.t05-thin90.a2m.gz # 1h12A.t05-thin90.a2m with 73 sequences, total weight= 73 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13078 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h12A/info/1h12A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h12A/nostruct-align/1h12A.t05-thin90.a2m.gz, have 100872 columns in 425 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w8kA/nostruct-align/1w8kA.t05-thin90.a2m.gz # 1w8kA.t05-thin90.a2m with 40 sequences, total weight= 14.6588 avg weight= 0.36647 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w8kA/info/1w8kA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w8kA/nostruct-align/1w8kA.t05-thin90.a2m.gz, have 101234 columns in 426 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jl0A/nostruct-align/1jl0A.t05-thin90.a2m.gz # 1jl0A.t05-thin90.a2m with 91 sequences, total weight= 20.8387 avg weight= 0.228996 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jl0A/info/1jl0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jl0A/nostruct-align/1jl0A.t05-thin90.a2m.gz, have 101544 columns in 427 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a92A/nostruct-align/1a92A.t05-thin90.a2m.gz # 1a92A.t05-thin90.a2m with 26 sequences, total weight= 3.25279 avg weight= 0.125107 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a92A/info/1a92A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1a92A/nostruct-align/1a92A.t05-thin90.a2m.gz, have 101594 columns in 428 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kqfC/nostruct-align/1kqfC.t05-thin90.a2m.gz # 1kqfC.t05-thin90.a2m with 391 sequences, total weight= 391 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06452 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kqfC/info/1kqfC.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kqfC/nostruct-align/1kqfC.t05-thin90.a2m.gz, have 101810 columns in 429 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t6eX/nostruct-align/1t6eX.t05-thin90.a2m.gz # 1t6eX.t05-thin90.a2m with 961 sequences, total weight= 961 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15895 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t6eX/info/1t6eX.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t6eX/nostruct-align/1t6eX.t05-thin90.a2m.gz, have 102172 columns in 430 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uuqA/nostruct-align/1uuqA.t05-thin90.a2m.gz # 1uuqA.t05-thin90.a2m with 2316 sequences, total weight= 2316 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.830243 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uuqA/info/1uuqA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uuqA/nostruct-align/1uuqA.t05-thin90.a2m.gz, have 102582 columns in 431 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xkzA/nostruct-align/1xkzA.t05-thin90.a2m.gz # 1xkzA.t05-thin90.a2m with 1506 sequences, total weight= 1506 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10117 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xkzA/info/1xkzA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xkzA/nostruct-align/1xkzA.t05-thin90.a2m.gz, have 102826 columns in 432 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dbxA/nostruct-align/1dbxA.t05-thin90.a2m.gz # 1dbxA.t05-thin90.a2m with 437 sequences, total weight= 437 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24223 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dbxA/info/1dbxA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dbxA/nostruct-align/1dbxA.t05-thin90.a2m.gz, have 102978 columns in 433 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hq1A/nostruct-align/1hq1A.t05-thin90.a2m.gz # 1hq1A.t05-thin90.a2m with 243 sequences, total weight= 12.7849 avg weight= 0.0526126 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hq1A/info/1hq1A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hq1A/nostruct-align/1hq1A.t05-thin90.a2m.gz, have 103054 columns in 434 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j31A/nostruct-align/1j31A.t05-thin90.a2m.gz # 1j31A.t05-thin90.a2m with 1196 sequences, total weight= 1196 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1101 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j31A/info/1j31A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j31A/nostruct-align/1j31A.t05-thin90.a2m.gz, have 103316 columns in 435 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r6dA/nostruct-align/1r6dA.t05-thin90.a2m.gz # 1r6dA.t05-thin90.a2m with 9775 sequences, total weight= 9775 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.913955 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r6dA/info/1r6dA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r6dA/nostruct-align/1r6dA.t05-thin90.a2m.gz, have 103638 columns in 436 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r29A/nostruct-align/1r29A.t05-thin90.a2m.gz # 1r29A.t05-thin90.a2m with 1379 sequences, total weight= 1379 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15704 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r29A/info/1r29A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r29A/nostruct-align/1r29A.t05-thin90.a2m.gz, have 103760 columns in 437 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xg4A/nostruct-align/1xg4A.t05-thin90.a2m.gz # 1xg4A.t05-thin90.a2m with 564 sequences, total weight= 514.723 avg weight= 0.912629 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30165 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xg4A/info/1xg4A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xg4A/nostruct-align/1xg4A.t05-thin90.a2m.gz, have 104047 columns in 438 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x9iA/nostruct-align/1x9iA.t05-thin90.a2m.gz # 1x9iA.t05-thin90.a2m with 1371 sequences, total weight= 1371 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0968 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x9iA/info/1x9iA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1x9iA/nostruct-align/1x9iA.t05-thin90.a2m.gz, have 104347 columns in 439 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xy7A/nostruct-align/1xy7A.t05-thin90.a2m.gz # 1xy7A.t05-thin90.a2m with 2065 sequences, total weight= 2065 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.950349 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xy7A/info/1xy7A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xy7A/nostruct-align/1xy7A.t05-thin90.a2m.gz, have 104467 columns in 440 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gs9A/nostruct-align/1gs9A.t05-thin90.a2m.gz # 1gs9A.t05-thin90.a2m with 77 sequences, total weight= 28.3668 avg weight= 0.3684 41 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gs9A/info/1gs9A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gs9A/nostruct-align/1gs9A.t05-thin90.a2m.gz, have 104611 columns in 441 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s5uA/nostruct-align/1s5uA.t05-thin90.a2m.gz # 1s5uA.t05-thin90.a2m with 931 sequences, total weight= 931 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.977107 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s5uA/info/1s5uA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s5uA/nostruct-align/1s5uA.t05-thin90.a2m.gz, have 104740 columns in 442 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s3cA/nostruct-align/1s3cA.t05-thin90.a2m.gz # 1s3cA.t05-thin90.a2m with 376 sequences, total weight= 310.953 avg weight= 0.827002 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30198 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s3cA/info/1s3cA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s3cA/nostruct-align/1s3cA.t05-thin90.a2m.gz, have 104878 columns in 443 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pjxA/nostruct-align/1pjxA.t05-thin90.a2m.gz # 1pjxA.t05-thin90.a2m with 5280 sequences, total weight= 5280 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.708071 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pjxA/info/1pjxA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pjxA/nostruct-align/1pjxA.t05-thin90.a2m.gz, have 105192 columns in 444 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hyp/nostruct-align/1hyp.t05-thin90.a2m.gz # 1hyp.t05-thin90.a2m with 84 sequences, total weight= 6.11079 avg weight= 0.0727475 31 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hyp/info/1hyp.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hyp/nostruct-align/1hyp.t05-thin90.a2m.gz, have 105267 columns in 445 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jndA/nostruct-align/1jndA.t05-thin90.a2m.gz # 1jndA.t05-thin90.a2m with 864 sequences, total weight= 864 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0971 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jndA/info/1jndA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jndA/nostruct-align/1jndA.t05-thin90.a2m.gz, have 105667 columns in 446 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mj4A/nostruct-align/1mj4A.t05-thin90.a2m.gz # 1mj4A.t05-thin90.a2m with 474 sequences, total weight= 48.4303 avg weight= 0.102174 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30159 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mj4A/info/1mj4A.stride-mixed.o_notor2 WARNING: skipping m, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1m/1mj4A/nostruct-align/1mj4A.t05-thin90.a2m.gz, have 105746 columns in 447 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vmeA/nostruct-align/1vmeA.t05-thin90.a2m.gz # 1vmeA.t05-thin90.a2m with 3349 sequences, total weight= 3349 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.824368 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vmeA/info/1vmeA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vmeA/nostruct-align/1vmeA.t05-thin90.a2m.gz, have 106147 columns in 448 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vpjA/nostruct-align/1vpjA.t05-thin90.a2m.gz # 1vpjA.t05-thin90.a2m with 126 sequences, total weight= 10.115 avg weight= 0.0802777 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vpjA/info/1vpjA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vpjA/nostruct-align/1vpjA.t05-thin90.a2m.gz, have 106325 columns in 449 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bikB/nostruct-align/2bikB.t05-thin90.a2m.gz # 2bikB.t05-thin90.a2m with 13344 sequences, total weight= 13344 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08744 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bikB/info/2bikB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2b/2bikB/nostruct-align/2bikB.t05-thin90.a2m.gz, have 106598 columns in 450 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mnnA/nostruct-align/1mnnA.t05-thin90.a2m.gz # 1mnnA.t05-thin90.a2m with 56 sequences, total weight= 47.3931 avg weight= 0.846305 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mnnA/info/1mnnA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mnnA/nostruct-align/1mnnA.t05-thin90.a2m.gz, have 106888 columns in 451 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j5xA/nostruct-align/1j5xA.t05-thin90.a2m.gz # 1j5xA.t05-thin90.a2m with 1132 sequences, total weight= 1132 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13098 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j5xA/info/1j5xA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j5xA/nostruct-align/1j5xA.t05-thin90.a2m.gz, have 107207 columns in 452 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bx7/nostruct-align/1bx7.t05-thin90.a2m.gz # 1bx7.t05-thin90.a2m with 5 sequences, total weight= 2.54723 avg weight= 0.509447 14 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bx7/info/1bx7.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bx7/nostruct-align/1bx7.t05-thin90.a2m.gz, have 107258 columns in 453 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mdoA/nostruct-align/1mdoA.t05-thin90.a2m.gz # 1mdoA.t05-thin90.a2m with 8618 sequences, total weight= 8618 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.831506 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mdoA/info/1mdoA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mdoA/nostruct-align/1mdoA.t05-thin90.a2m.gz, have 107623 columns in 454 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r9lA/nostruct-align/1r9lA.t05-thin90.a2m.gz # 1r9lA.t05-thin90.a2m with 1013 sequences, total weight= 1013 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.93199 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r9lA/info/1r9lA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r9lA/nostruct-align/1r9lA.t05-thin90.a2m.gz, have 107932 columns in 455 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pp0A/nostruct-align/1pp0A.t05-thin90.a2m.gz # 1pp0A.t05-thin90.a2m with 11 sequences, total weight= 6.82396 avg weight= 0.62036 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pp0A/info/1pp0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pp0A/nostruct-align/1pp0A.t05-thin90.a2m.gz, have 108123 columns in 456 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r8sA/nostruct-align/1r8sA.t05-thin90.a2m.gz # 1r8sA.t05-thin90.a2m with 6059 sequences, total weight= 6059 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05526 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r8sA/info/1r8sA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r8sA/nostruct-align/1r8sA.t05-thin90.a2m.gz, have 108283 columns in 457 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xvqA/nostruct-align/1xvqA.t05-thin90.a2m.gz # 1xvqA.t05-thin90.a2m with 2409 sequences, total weight= 2409 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01298 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xvqA/info/1xvqA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xvqA/nostruct-align/1xvqA.t05-thin90.a2m.gz, have 108443 columns in 458 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kgsA/nostruct-align/1kgsA.t05-thin90.a2m.gz # 1kgsA.t05-thin90.a2m with 8658 sequences, total weight= 8658 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1377 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kgsA/info/1kgsA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kgsA/nostruct-align/1kgsA.t05-thin90.a2m.gz, have 108662 columns in 459 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xyiA/nostruct-align/1xyiA.t05-thin90.a2m.gz # 1xyiA.t05-thin90.a2m with 6 sequences, total weight= 2.34343 avg weight= 0.390572 7 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xyiA/info/1xyiA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xyiA/nostruct-align/1xyiA.t05-thin90.a2m.gz, have 108728 columns in 460 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ox0A/nostruct-align/1ox0A.t05-thin90.a2m.gz # 1ox0A.t05-thin90.a2m with 3080 sequences, total weight= 1345.2 avg weight= 0.436754 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32237 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ox0A/info/1ox0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ox0A/nostruct-align/1ox0A.t05-thin90.a2m.gz, have 109142 columns in 461 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o7nB/nostruct-align/1o7nB.t05-thin90.a2m.gz # 1o7nB.t05-thin90.a2m with 201 sequences, total weight= 201 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19742 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o7nB/info/1o7nB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o7nB/nostruct-align/1o7nB.t05-thin90.a2m.gz, have 109335 columns in 462 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2t/2tpsA/nostruct-align/2tpsA.t05-thin90.a2m.gz # 2tpsA.t05-thin90.a2m with 2889 sequences, total weight= 2889 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.906272 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2t/2tpsA/info/2tpsA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2t/2tpsA/nostruct-align/2tpsA.t05-thin90.a2m.gz, have 109561 columns in 463 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oqjA/nostruct-align/1oqjA.t05-thin90.a2m.gz # 1oqjA.t05-thin90.a2m with 71 sequences, total weight= 22.5273 avg weight= 0.317286 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oqjA/info/1oqjA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oqjA/nostruct-align/1oqjA.t05-thin90.a2m.gz, have 109651 columns in 464 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rwrA/nostruct-align/1rwrA.t05-thin90.a2m.gz # 1rwrA.t05-thin90.a2m with 91 sequences, total weight= 19.4117 avg weight= 0.213315 42 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rwrA/info/1rwrA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rwrA/nostruct-align/1rwrA.t05-thin90.a2m.gz, have 109948 columns in 465 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dbwA/nostruct-align/1dbwA.t05-thin90.a2m.gz # 1dbwA.t05-thin90.a2m with 9122 sequences, total weight= 9122 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22657 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dbwA/info/1dbwA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dbwA/nostruct-align/1dbwA.t05-thin90.a2m.gz, have 110071 columns in 466 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jkxA/nostruct-align/1jkxA.t05-thin90.a2m.gz # 1jkxA.t05-thin90.a2m with 836 sequences, total weight= 726.361 avg weight= 0.868853 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30334 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jkxA/info/1jkxA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jkxA/nostruct-align/1jkxA.t05-thin90.a2m.gz, have 110280 columns in 467 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b5pA/nostruct-align/1b5pA.t05-thin90.a2m.gz # 1b5pA.t05-thin90.a2m with 4909 sequences, total weight= 4909 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.913764 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b5pA/info/1b5pA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1b5pA/nostruct-align/1b5pA.t05-thin90.a2m.gz, have 110662 columns in 468 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qkrA/nostruct-align/1qkrA.t05-thin90.a2m.gz # 1qkrA.t05-thin90.a2m with 47 sequences, total weight= 20.9251 avg weight= 0.445216 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qkrA/info/1qkrA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qkrA/nostruct-align/1qkrA.t05-thin90.a2m.gz, have 110843 columns in 469 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m45A/nostruct-align/1m45A.t05-thin90.a2m.gz # 1m45A.t05-thin90.a2m with 2016 sequences, total weight= 2016 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04143 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m45A/info/1m45A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m45A/nostruct-align/1m45A.t05-thin90.a2m.gz, have 110985 columns in 470 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ui0A/nostruct-align/1ui0A.t05-thin90.a2m.gz # 1ui0A.t05-thin90.a2m with 316 sequences, total weight= 316 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25978 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ui0A/info/1ui0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ui0A/nostruct-align/1ui0A.t05-thin90.a2m.gz, have 111177 columns in 471 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oxxK/nostruct-align/1oxxK.t05-thin90.a2m.gz # 1oxxK.t05-thin90.a2m with 19469 sequences, total weight= 19469 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.996723 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oxxK/info/1oxxK.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oxxK/nostruct-align/1oxxK.t05-thin90.a2m.gz, have 111529 columns in 472 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a6m/nostruct-align/1a6m.t05-thin90.a2m.gz # 1a6m.t05-thin90.a2m with 843 sequences, total weight= 843 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28848 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a6m/info/1a6m.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1a6m/nostruct-align/1a6m.t05-thin90.a2m.gz, have 111680 columns in 473 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cnv/nostruct-align/1cnv.t05-thin90.a2m.gz # 1cnv.t05-thin90.a2m with 961 sequences, total weight= 961 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08404 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cnv/info/1cnv.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cnv/nostruct-align/1cnv.t05-thin90.a2m.gz, have 111963 columns in 474 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lycA/nostruct-align/1lycA.t05-thin90.a2m.gz # 1lycA.t05-thin90.a2m with 878 sequences, total weight= 124.839 avg weight= 0.142185 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3027 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lycA/info/1lycA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lycA/nostruct-align/1lycA.t05-thin90.a2m.gz, have 112299 columns in 475 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ewfA/nostruct-align/1ewfA.t05-thin90.a2m.gz # 1ewfA.t05-thin90.a2m with 152 sequences, total weight= 152 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07442 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ewfA/info/1ewfA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ewfA/nostruct-align/1ewfA.t05-thin90.a2m.gz, have 112755 columns in 476 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dypA/nostruct-align/1dypA.t05-thin90.a2m.gz # 1dypA.t05-thin90.a2m with 497 sequences, total weight= 497 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07769 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dypA/info/1dypA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dypA/nostruct-align/1dypA.t05-thin90.a2m.gz, have 113026 columns in 477 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r6wA/nostruct-align/1r6wA.t05-thin90.a2m.gz # 1r6wA.t05-thin90.a2m with 1071 sequences, total weight= 1071 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20476 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r6wA/info/1r6wA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r6wA/nostruct-align/1r6wA.t05-thin90.a2m.gz, have 113347 columns in 478 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u9cA/nostruct-align/1u9cA.t05-thin90.a2m.gz # 1u9cA.t05-thin90.a2m with 857 sequences, total weight= 857 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15544 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u9cA/info/1u9cA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1u9cA/nostruct-align/1u9cA.t05-thin90.a2m.gz, have 113568 columns in 479 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y0kA/nostruct-align/1y0kA.t05-thin90.a2m.gz # 1y0kA.t05-thin90.a2m with 4 sequences, total weight= 2.08018 avg weight= 0.520046 8 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y0kA/info/1y0kA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1y0kA/nostruct-align/1y0kA.t05-thin90.a2m.gz, have 113748 columns in 480 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kptA/nostruct-align/1kptA.t05-thin90.a2m.gz # 1kptA.t05-thin90.a2m with 7 sequences, total weight= 3.89767 avg weight= 0.55681 14 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kptA/info/1kptA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kptA/nostruct-align/1kptA.t05-thin90.a2m.gz, have 113853 columns in 481 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nvmB/nostruct-align/1nvmB.t05-thin90.a2m.gz # 1nvmB.t05-thin90.a2m with 1133 sequences, total weight= 1133 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23087 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nvmB/info/1nvmB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nvmB/nostruct-align/1nvmB.t05-thin90.a2m.gz, have 114165 columns in 482 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t5bA/nostruct-align/1t5bA.t05-thin90.a2m.gz # 1t5bA.t05-thin90.a2m with 1189 sequences, total weight= 1189 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.977522 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t5bA/info/1t5bA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t5bA/nostruct-align/1t5bA.t05-thin90.a2m.gz, have 114364 columns in 483 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tw6A/nostruct-align/1tw6A.t05-thin90.a2m.gz # 1tw6A.t05-thin90.a2m with 283 sequences, total weight= 106.99 avg weight= 0.378055 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30334 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tw6A/info/1tw6A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tw6A/nostruct-align/1tw6A.t05-thin90.a2m.gz, have 114454 columns in 484 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u55A/nostruct-align/1u55A.t05-thin90.a2m.gz # 1u55A.t05-thin90.a2m with 84 sequences, total weight= 84 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26181 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u55A/info/1u55A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1u55A/nostruct-align/1u55A.t05-thin90.a2m.gz, have 114642 columns in 485 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gheA/nostruct-align/1gheA.t05-thin90.a2m.gz # 1gheA.t05-thin90.a2m with 5842 sequences, total weight= 5842 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.730678 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gheA/info/1gheA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gheA/nostruct-align/1gheA.t05-thin90.a2m.gz, have 114812 columns in 486 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1smxA/nostruct-align/1smxA.t05-thin90.a2m.gz # 1smxA.t05-thin90.a2m with 156 sequences, total weight= 9.12155 avg weight= 0.0584715 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1smxA/info/1smxA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1smxA/nostruct-align/1smxA.t05-thin90.a2m.gz, have 114899 columns in 487 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pqhA/nostruct-align/1pqhA.t05-thin90.a2m.gz # 1pqhA.t05-thin90.a2m with 104 sequences, total weight= 7.38036 avg weight= 0.070965 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pqhA/info/1pqhA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pqhA/nostruct-align/1pqhA.t05-thin90.a2m.gz, have 115018 columns in 488 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jfuA/nostruct-align/1jfuA.t05-thin90.a2m.gz # 1jfuA.t05-thin90.a2m with 4251 sequences, total weight= 4251 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.874825 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jfuA/info/1jfuA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jfuA/nostruct-align/1jfuA.t05-thin90.a2m.gz, have 115194 columns in 489 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w9aA/nostruct-align/1w9aA.t05-thin90.a2m.gz # 1w9aA.t05-thin90.a2m with 674 sequences, total weight= 674 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.897441 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w9aA/info/1w9aA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w9aA/nostruct-align/1w9aA.t05-thin90.a2m.gz, have 115336 columns in 490 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l6rA/nostruct-align/1l6rA.t05-thin90.a2m.gz # 1l6rA.t05-thin90.a2m with 4448 sequences, total weight= 4448 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.883331 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l6rA/info/1l6rA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1l6rA/nostruct-align/1l6rA.t05-thin90.a2m.gz, have 115561 columns in 491 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r6xA/nostruct-align/1r6xA.t05-thin90.a2m.gz # 1r6xA.t05-thin90.a2m with 144 sequences, total weight= 31.6293 avg weight= 0.219648 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r6xA/info/1r6xA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r6xA/nostruct-align/1r6xA.t05-thin90.a2m.gz, have 115947 columns in 492 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qtnA/nostruct-align/1qtnA.t05-thin90.a2m.gz # 1qtnA.t05-thin90.a2m with 208 sequences, total weight= 53.9158 avg weight= 0.25921 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30079 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qtnA/info/1qtnA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qtnA/nostruct-align/1qtnA.t05-thin90.a2m.gz, have 116099 columns in 493 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wu9A/nostruct-align/1wu9A.t05-thin90.a2m.gz # 1wu9A.t05-thin90.a2m with 48 sequences, total weight= 8.30385 avg weight= 0.172997 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wu9A/info/1wu9A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wu9A/nostruct-align/1wu9A.t05-thin90.a2m.gz, have 116158 columns in 494 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fs1B/nostruct-align/1fs1B.t05-thin90.a2m.gz # 1fs1B.t05-thin90.a2m with 182 sequences, total weight= 43.6422 avg weight= 0.239793 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fs1B/info/1fs1B.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fs1B/nostruct-align/1fs1B.t05-thin90.a2m.gz, have 116274 columns in 495 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jl1A/nostruct-align/1jl1A.t05-thin90.a2m.gz # 1jl1A.t05-thin90.a2m with 764 sequences, total weight= 764 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21004 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jl1A/info/1jl1A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jl1A/nostruct-align/1jl1A.t05-thin90.a2m.gz, have 116426 columns in 496 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hm9A/nostruct-align/1hm9A.t05-thin90.a2m.gz # 1hm9A.t05-thin90.a2m with 3474 sequences, total weight= 3474 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03227 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hm9A/info/1hm9A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hm9A/nostruct-align/1hm9A.t05-thin90.a2m.gz, have 116884 columns in 497 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oboA/nostruct-align/1oboA.t05-thin90.a2m.gz # 1oboA.t05-thin90.a2m with 1004 sequences, total weight= 1004 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0383 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oboA/info/1oboA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oboA/nostruct-align/1oboA.t05-thin90.a2m.gz, have 117053 columns in 498 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qwnA/nostruct-align/1qwnA.t05-thin90.a2m.gz # 1qwnA.t05-thin90.a2m with 235 sequences, total weight= 235 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14775 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qwnA/info/1qwnA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qwnA/nostruct-align/1qwnA.t05-thin90.a2m.gz, have 118067 columns in 499 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gqnA/nostruct-align/1gqnA.t05-thin90.a2m.gz # 1gqnA.t05-thin90.a2m with 121 sequences, total weight= 121 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27204 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gqnA/info/1gqnA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gqnA/nostruct-align/1gqnA.t05-thin90.a2m.gz, have 118319 columns in 500 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iuqA/nostruct-align/1iuqA.t05-thin90.a2m.gz # 1iuqA.t05-thin90.a2m with 1014 sequences, total weight= 1014 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.915602 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iuqA/info/1iuqA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iuqA/nostruct-align/1iuqA.t05-thin90.a2m.gz, have 118676 columns in 501 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v6pA/nostruct-align/1v6pA.t05-thin90.a2m.gz # 1v6pA.t05-thin90.a2m with 174 sequences, total weight= 19.632 avg weight= 0.112827 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v6pA/info/1v6pA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v6pA/nostruct-align/1v6pA.t05-thin90.a2m.gz, have 118738 columns in 502 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1azo/nostruct-align/1azo.t05-thin90.a2m.gz # 1azo.t05-thin90.a2m with 43 sequences, total weight= 33.2028 avg weight= 0.772157 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1azo/info/1azo.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1azo/nostruct-align/1azo.t05-thin90.a2m.gz, have 118952 columns in 503 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cy5A/nostruct-align/1cy5A.t05-thin90.a2m.gz # 1cy5A.t05-thin90.a2m with 10 sequences, total weight= 3.45596 avg weight= 0.345596 12 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cy5A/info/1cy5A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cy5A/nostruct-align/1cy5A.t05-thin90.a2m.gz, have 119044 columns in 504 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v2zA/nostruct-align/1v2zA.t05-thin90.a2m.gz # 1v2zA.t05-thin90.a2m with 14 sequences, total weight= 3.64899 avg weight= 0.260642 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v2zA/info/1v2zA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v2zA/nostruct-align/1v2zA.t05-thin90.a2m.gz, have 119150 columns in 505 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m4lA/nostruct-align/1m4lA.t05-thin90.a2m.gz # 1m4lA.t05-thin90.a2m with 668 sequences, total weight= 668 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08262 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m4lA/info/1m4lA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m4lA/nostruct-align/1m4lA.t05-thin90.a2m.gz, have 119457 columns in 506 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gu7A/nostruct-align/1gu7A.t05-thin90.a2m.gz # 1gu7A.t05-thin90.a2m with 3698 sequences, total weight= 3698 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08652 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gu7A/info/1gu7A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gu7A/nostruct-align/1gu7A.t05-thin90.a2m.gz, have 119821 columns in 507 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ogoX/nostruct-align/1ogoX.t05-thin90.a2m.gz # 1ogoX.t05-thin90.a2m with 49 sequences, total weight= 48.3975 avg weight= 0.987705 20 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ogoX/info/1ogoX.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ogoX/nostruct-align/1ogoX.t05-thin90.a2m.gz, have 120393 columns in 508 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ryaA/nostruct-align/1ryaA.t05-thin90.a2m.gz # 1ryaA.t05-thin90.a2m with 2619 sequences, total weight= 2619 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.845022 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ryaA/info/1ryaA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1ryaA/nostruct-align/1ryaA.t05-thin90.a2m.gz, have 120553 columns in 509 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q0rA/nostruct-align/1q0rA.t05-thin90.a2m.gz # 1q0rA.t05-thin90.a2m with 8053 sequences, total weight= 8053 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.666275 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q0rA/info/1q0rA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q0rA/nostruct-align/1q0rA.t05-thin90.a2m.gz, have 120850 columns in 510 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fr2A/nostruct-align/1fr2A.t05-thin90.a2m.gz # 1fr2A.t05-thin90.a2m with 24 sequences, total weight= 5.16778 avg weight= 0.215324 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fr2A/info/1fr2A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fr2A/nostruct-align/1fr2A.t05-thin90.a2m.gz, have 120933 columns in 511 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e29A/nostruct-align/1e29A.t05-thin90.a2m.gz # 1e29A.t05-thin90.a2m with 483 sequences, total weight= 483 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10301 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e29A/info/1e29A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e29A/nostruct-align/1e29A.t05-thin90.a2m.gz, have 121068 columns in 512 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gveA/nostruct-align/1gveA.t05-thin90.a2m.gz # 1gveA.t05-thin90.a2m with 1966 sequences, total weight= 1966 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25952 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gveA/info/1gveA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gveA/nostruct-align/1gveA.t05-thin90.a2m.gz, have 121392 columns in 513 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k3iA/nostruct-align/1k3iA.t05-thin90.a2m.gz # 1k3iA.t05-thin90.a2m with 1899 sequences, total weight= 1899 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15587 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k3iA/info/1k3iA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k3iA/nostruct-align/1k3iA.t05-thin90.a2m.gz, have 122043 columns in 514 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g2nA/nostruct-align/1g2nA.t05-thin90.a2m.gz # 1g2nA.t05-thin90.a2m with 1158 sequences, total weight= 1158 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.876705 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g2nA/info/1g2nA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g2nA/nostruct-align/1g2nA.t05-thin90.a2m.gz, have 122289 columns in 515 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uuyA/nostruct-align/1uuyA.t05-thin90.a2m.gz # 1uuyA.t05-thin90.a2m with 728 sequences, total weight= 728 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27543 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uuyA/info/1uuyA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uuyA/nostruct-align/1uuyA.t05-thin90.a2m.gz, have 122450 columns in 516 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jo8A/nostruct-align/1jo8A.t05-thin90.a2m.gz # 1jo8A.t05-thin90.a2m with 1510 sequences, total weight= 146.671 avg weight= 0.0971334 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32808 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jo8A/info/1jo8A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jo8A/nostruct-align/1jo8A.t05-thin90.a2m.gz, have 122508 columns in 517 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pz7A/nostruct-align/1pz7A.t05-thin90.a2m.gz # 1pz7A.t05-thin90.a2m with 1244 sequences, total weight= 1244 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.949527 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pz7A/info/1pz7A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pz7A/nostruct-align/1pz7A.t05-thin90.a2m.gz, have 122696 columns in 518 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n8kA/nostruct-align/1n8kA.t05-thin90.a2m.gz # 1n8kA.t05-thin90.a2m with 3626 sequences, total weight= 3626 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17215 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n8kA/info/1n8kA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n8kA/nostruct-align/1n8kA.t05-thin90.a2m.gz, have 123070 columns in 519 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jx4A/nostruct-align/1jx4A.t05-thin90.a2m.gz # 1jx4A.t05-thin90.a2m with 567 sequences, total weight= 567 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27993 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jx4A/info/1jx4A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jx4A/nostruct-align/1jx4A.t05-thin90.a2m.gz, have 123411 columns in 520 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e87A/nostruct-align/1e87A.t05-thin90.a2m.gz # 1e87A.t05-thin90.a2m with 2197 sequences, total weight= 2197 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08203 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e87A/info/1e87A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e87A/nostruct-align/1e87A.t05-thin90.a2m.gz, have 123528 columns in 521 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kjqA/nostruct-align/1kjqA.t05-thin90.a2m.gz # 1kjqA.t05-thin90.a2m with 2813 sequences, total weight= 2813 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04206 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kjqA/info/1kjqA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kjqA/nostruct-align/1kjqA.t05-thin90.a2m.gz, have 123916 columns in 522 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jsdA/nostruct-align/1jsdA.t05-thin90.a2m.gz # 1jsdA.t05-thin90.a2m with 158 sequences, total weight= 10.7363 avg weight= 0.067951 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jsdA/info/1jsdA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jsdA/nostruct-align/1jsdA.t05-thin90.a2m.gz, have 124233 columns in 523 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1it2A/nostruct-align/1it2A.t05-thin90.a2m.gz # 1it2A.t05-thin90.a2m with 796 sequences, total weight= 796 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29097 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1it2A/info/1it2A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1it2A/nostruct-align/1it2A.t05-thin90.a2m.gz, have 124379 columns in 524 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qb7A/nostruct-align/1qb7A.t05-thin90.a2m.gz # 1qb7A.t05-thin90.a2m with 2206 sequences, total weight= 2206 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.935153 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qb7A/info/1qb7A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qb7A/nostruct-align/1qb7A.t05-thin90.a2m.gz, have 124615 columns in 525 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vbwA/nostruct-align/1vbwA.t05-thin90.a2m.gz # 1vbwA.t05-thin90.a2m with 77 sequences, total weight= 15.2251 avg weight= 0.197729 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vbwA/info/1vbwA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vbwA/nostruct-align/1vbwA.t05-thin90.a2m.gz, have 124683 columns in 526 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ubkS/nostruct-align/1ubkS.t05-thin90.a2m.gz # 1ubkS.t05-thin90.a2m with 393 sequences, total weight= 104.253 avg weight= 0.265275 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30153 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ubkS/info/1ubkS.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ubkS/nostruct-align/1ubkS.t05-thin90.a2m.gz, have 124950 columns in 527 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jykA/nostruct-align/1jykA.t05-thin90.a2m.gz # 1jykA.t05-thin90.a2m with 2547 sequences, total weight= 2547 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0321 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jykA/info/1jykA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jykA/nostruct-align/1jykA.t05-thin90.a2m.gz, have 125179 columns in 528 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uv4A/nostruct-align/1uv4A.t05-thin90.a2m.gz # 1uv4A.t05-thin90.a2m with 767 sequences, total weight= 767 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.974203 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uv4A/info/1uv4A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uv4A/nostruct-align/1uv4A.t05-thin90.a2m.gz, have 125470 columns in 529 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o4yA/nostruct-align/1o4yA.t05-thin90.a2m.gz # 1o4yA.t05-thin90.a2m with 498 sequences, total weight= 498 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09692 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o4yA/info/1o4yA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o4yA/nostruct-align/1o4yA.t05-thin90.a2m.gz, have 125740 columns in 530 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pkoA/nostruct-align/1pkoA.t05-thin90.a2m.gz # 1pkoA.t05-thin90.a2m with 10840 sequences, total weight= 10840 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1536 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pkoA/info/1pkoA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pkoA/nostruct-align/1pkoA.t05-thin90.a2m.gz, have 125864 columns in 531 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1urrA/nostruct-align/1urrA.t05-thin90.a2m.gz # 1urrA.t05-thin90.a2m with 286 sequences, total weight= 57.7349 avg weight= 0.20187 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30204 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1urrA/info/1urrA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1urrA/nostruct-align/1urrA.t05-thin90.a2m.gz, have 125961 columns in 532 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x7yB/nostruct-align/1x7yB.t05-thin90.a2m.gz # 1x7yB.t05-thin90.a2m with 1468 sequences, total weight= 1468 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20614 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x7yB/info/1x7yB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1x7yB/nostruct-align/1x7yB.t05-thin90.a2m.gz, have 126290 columns in 533 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kveA/nostruct-align/1kveA.t05-thin90.a2m.gz # 1kveA.t05-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.697962 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kveA/info/1kveA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kveA/nostruct-align/1kveA.t05-thin90.a2m.gz, have 126353 columns in 534 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kp6A/nostruct-align/1kp6A.t05-thin90.a2m.gz # 1kp6A.t05-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.617161 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kp6A/info/1kp6A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kp6A/nostruct-align/1kp6A.t05-thin90.a2m.gz, have 126432 columns in 535 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e5kA/nostruct-align/1e5kA.t05-thin90.a2m.gz # 1e5kA.t05-thin90.a2m with 2587 sequences, total weight= 2587 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0379 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e5kA/info/1e5kA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e5kA/nostruct-align/1e5kA.t05-thin90.a2m.gz, have 126620 columns in 536 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eajA/nostruct-align/1eajA.t05-thin90.a2m.gz # 1eajA.t05-thin90.a2m with 12016 sequences, total weight= 48.187 avg weight= 0.00401024 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30179 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eajA/info/1eajA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1eajA/nostruct-align/1eajA.t05-thin90.a2m.gz, have 126744 columns in 537 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lzlA/nostruct-align/1lzlA.t05-thin90.a2m.gz # 1lzlA.t05-thin90.a2m with 5218 sequences, total weight= 5218 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.833145 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lzlA/info/1lzlA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lzlA/nostruct-align/1lzlA.t05-thin90.a2m.gz, have 127061 columns in 538 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jo0A/nostruct-align/1jo0A.t05-thin90.a2m.gz # 1jo0A.t05-thin90.a2m with 115 sequences, total weight= 19.3214 avg weight= 0.168012 42 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jo0A/info/1jo0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jo0A/nostruct-align/1jo0A.t05-thin90.a2m.gz, have 127158 columns in 539 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sqeA/nostruct-align/1sqeA.t05-thin90.a2m.gz # 1sqeA.t05-thin90.a2m with 165 sequences, total weight= 165 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08819 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sqeA/info/1sqeA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sqeA/nostruct-align/1sqeA.t05-thin90.a2m.gz, have 127259 columns in 540 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pgs/nostruct-align/1pgs.t05-thin90.a2m.gz # 1pgs.t05-thin90.a2m with 5 sequences, total weight= 5 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01788 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pgs/info/1pgs.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pgs/nostruct-align/1pgs.t05-thin90.a2m.gz, have 127570 columns in 541 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jb3A/nostruct-align/1jb3A.t05-thin90.a2m.gz # 1jb3A.t05-thin90.a2m with 9 sequences, total weight= 4.01042 avg weight= 0.445602 12 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jb3A/info/1jb3A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jb3A/nostruct-align/1jb3A.t05-thin90.a2m.gz, have 127697 columns in 542 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k07A/nostruct-align/1k07A.t05-thin90.a2m.gz # 1k07A.t05-thin90.a2m with 3357 sequences, total weight= 3357 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.827949 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k07A/info/1k07A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k07A/nostruct-align/1k07A.t05-thin90.a2m.gz, have 127959 columns in 543 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vhqA/nostruct-align/1vhqA.t05-thin90.a2m.gz # 1vhqA.t05-thin90.a2m with 719 sequences, total weight= 719 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20932 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vhqA/info/1vhqA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vhqA/nostruct-align/1vhqA.t05-thin90.a2m.gz, have 128176 columns in 544 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xkpB/nostruct-align/1xkpB.t05-thin90.a2m.gz # 1xkpB.t05-thin90.a2m with 9 sequences, total weight= 4.98957 avg weight= 0.554397 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xkpB/info/1xkpB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xkpB/nostruct-align/1xkpB.t05-thin90.a2m.gz, have 128297 columns in 545 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nkpA/nostruct-align/1nkpA.t05-thin90.a2m.gz # 1nkpA.t05-thin90.a2m with 172 sequences, total weight= 50.8201 avg weight= 0.295466 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30064 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nkpA/info/1nkpA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nkpA/nostruct-align/1nkpA.t05-thin90.a2m.gz, have 128385 columns in 546 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1od3A/nostruct-align/1od3A.t05-thin90.a2m.gz # 1od3A.t05-thin90.a2m with 143 sequences, total weight= 100.318 avg weight= 0.701527 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30069 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1od3A/info/1od3A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1od3A/nostruct-align/1od3A.t05-thin90.a2m.gz, have 128516 columns in 547 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xjuA/nostruct-align/1xjuA.t05-thin90.a2m.gz # 1xjuA.t05-thin90.a2m with 134 sequences, total weight= 108.629 avg weight= 0.810662 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xjuA/info/1xjuA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xjuA/nostruct-align/1xjuA.t05-thin90.a2m.gz, have 128672 columns in 548 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2biqA/nostruct-align/2biqA.t05-thin90.a2m.gz # 2biqA.t05-thin90.a2m with 71 sequences, total weight= 11.3702 avg weight= 0.160144 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2biqA/info/2biqA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2b/2biqA/nostruct-align/2biqA.t05-thin90.a2m.gz, have 128857 columns in 549 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vyiA/nostruct-align/1vyiA.t05-thin90.a2m.gz # 1vyiA.t05-thin90.a2m with 19 sequences, total weight= 2.84115 avg weight= 0.149534 13 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vyiA/info/1vyiA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vyiA/nostruct-align/1vyiA.t05-thin90.a2m.gz, have 128968 columns in 550 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iw0A/nostruct-align/1iw0A.t05-thin90.a2m.gz # 1iw0A.t05-thin90.a2m with 158 sequences, total weight= 158 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20645 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iw0A/info/1iw0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iw0A/nostruct-align/1iw0A.t05-thin90.a2m.gz, have 129175 columns in 551 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e1hB/nostruct-align/1e1hB.t05-thin90.a2m.gz # 1e1hB.t05-thin90.a2m with 10 sequences, total weight= 5.65029 avg weight= 0.565029 20 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e1hB/info/1e1hB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e1hB/nostruct-align/1e1hB.t05-thin90.a2m.gz, have 129339 columns in 552 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iibA/nostruct-align/1iibA.t05-thin90.a2m.gz # 1iibA.t05-thin90.a2m with 107 sequences, total weight= 23.1835 avg weight= 0.216668 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iibA/info/1iibA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iibA/nostruct-align/1iibA.t05-thin90.a2m.gz, have 129442 columns in 553 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dcs/nostruct-align/1dcs.t05-thin90.a2m.gz # 1dcs.t05-thin90.a2m with 804 sequences, total weight= 804 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29597 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dcs/info/1dcs.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dcs/nostruct-align/1dcs.t05-thin90.a2m.gz, have 129721 columns in 554 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tuaA/nostruct-align/1tuaA.t05-thin90.a2m.gz # 1tuaA.t05-thin90.a2m with 114 sequences, total weight= 33.2667 avg weight= 0.291813 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tuaA/info/1tuaA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tuaA/nostruct-align/1tuaA.t05-thin90.a2m.gz, have 129910 columns in 555 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eu1A/nostruct-align/1eu1A.t05-thin90.a2m.gz # 1eu1A.t05-thin90.a2m with 1138 sequences, total weight= 1138 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14148 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eu1A/info/1eu1A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1eu1A/nostruct-align/1eu1A.t05-thin90.a2m.gz, have 130677 columns in 556 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s1fA/nostruct-align/1s1fA.t05-thin90.a2m.gz # 1s1fA.t05-thin90.a2m with 4484 sequences, total weight= 4484 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03412 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s1fA/info/1s1fA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s1fA/nostruct-align/1s1fA.t05-thin90.a2m.gz, have 131074 columns in 557 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sfdA/nostruct-align/1sfdA.t05-thin90.a2m.gz # 1sfdA.t05-thin90.a2m with 650 sequences, total weight= 650 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04702 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sfdA/info/1sfdA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sfdA/nostruct-align/1sfdA.t05-thin90.a2m.gz, have 131179 columns in 558 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kr7A/nostruct-align/1kr7A.t05-thin90.a2m.gz # 1kr7A.t05-thin90.a2m with 5 sequences, total weight= 3.76694 avg weight= 0.753387 12 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kr7A/info/1kr7A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kr7A/nostruct-align/1kr7A.t05-thin90.a2m.gz, have 131289 columns in 559 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hx6A/nostruct-align/1hx6A.t05-thin90.a2m.gz # 1hx6A.t05-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.583138 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hx6A/info/1hx6A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hx6A/nostruct-align/1hx6A.t05-thin90.a2m.gz, have 131659 columns in 560 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i12A/nostruct-align/1i12A.t05-thin90.a2m.gz # 1i12A.t05-thin90.a2m with 5796 sequences, total weight= 5796 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.737455 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i12A/info/1i12A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i12A/nostruct-align/1i12A.t05-thin90.a2m.gz, have 131813 columns in 561 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1szhA/nostruct-align/1szhA.t05-thin90.a2m.gz # 1szhA.t05-thin90.a2m with 5 sequences, total weight= 3.58609 avg weight= 0.717219 12 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1szhA/info/1szhA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1szhA/nostruct-align/1szhA.t05-thin90.a2m.gz, have 131960 columns in 562 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lqaA/nostruct-align/1lqaA.t05-thin90.a2m.gz # 1lqaA.t05-thin90.a2m with 2003 sequences, total weight= 2003 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24108 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lqaA/info/1lqaA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lqaA/nostruct-align/1lqaA.t05-thin90.a2m.gz, have 132306 columns in 563 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pcfA/nostruct-align/1pcfA.t05-thin90.a2m.gz # 1pcfA.t05-thin90.a2m with 43 sequences, total weight= 11.6757 avg weight= 0.271527 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pcfA/info/1pcfA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pcfA/nostruct-align/1pcfA.t05-thin90.a2m.gz, have 132372 columns in 564 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d3vA/nostruct-align/1d3vA.t05-thin90.a2m.gz # 1d3vA.t05-thin90.a2m with 409 sequences, total weight= 409 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25595 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d3vA/info/1d3vA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d3vA/nostruct-align/1d3vA.t05-thin90.a2m.gz, have 132680 columns in 565 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eyhA/nostruct-align/1eyhA.t05-thin90.a2m.gz # 1eyhA.t05-thin90.a2m with 113 sequences, total weight= 31.7054 avg weight= 0.280578 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eyhA/info/1eyhA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1eyhA/nostruct-align/1eyhA.t05-thin90.a2m.gz, have 132824 columns in 566 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1aqzA/nostruct-align/1aqzA.t05-thin90.a2m.gz # 1aqzA.t05-thin90.a2m with 4 sequences, total weight= 1.93686 avg weight= 0.484215 8 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1aqzA/info/1aqzA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1aqzA/nostruct-align/1aqzA.t05-thin90.a2m.gz, have 132966 columns in 567 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k94A/nostruct-align/1k94A.t05-thin90.a2m.gz # 1k94A.t05-thin90.a2m with 2065 sequences, total weight= 2065 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.991443 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k94A/info/1k94A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k94A/nostruct-align/1k94A.t05-thin90.a2m.gz, have 133131 columns in 568 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k7jA/nostruct-align/1k7jA.t05-thin90.a2m.gz # 1k7jA.t05-thin90.a2m with 499 sequences, total weight= 158.284 avg weight= 0.317202 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30939 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k7jA/info/1k7jA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k7jA/nostruct-align/1k7jA.t05-thin90.a2m.gz, have 133337 columns in 569 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gqzA/nostruct-align/1gqzA.t05-thin90.a2m.gz # 1gqzA.t05-thin90.a2m with 526 sequences, total weight= 526 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19215 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gqzA/info/1gqzA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gqzA/nostruct-align/1gqzA.t05-thin90.a2m.gz, have 133611 columns in 570 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jakA/nostruct-align/1jakA.t05-thin90.a2m.gz # 1jakA.t05-thin90.a2m with 296 sequences, total weight= 296 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05883 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jakA/info/1jakA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jakA/nostruct-align/1jakA.t05-thin90.a2m.gz, have 134110 columns in 571 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gxuA/nostruct-align/1gxuA.t05-thin90.a2m.gz # 1gxuA.t05-thin90.a2m with 282 sequences, total weight= 43.8658 avg weight= 0.155552 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30091 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gxuA/info/1gxuA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gxuA/nostruct-align/1gxuA.t05-thin90.a2m.gz, have 134198 columns in 572 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v7zA/nostruct-align/1v7zA.t05-thin90.a2m.gz # 1v7zA.t05-thin90.a2m with 104 sequences, total weight= 93.294 avg weight= 0.897058 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v7zA/info/1v7zA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v7zA/nostruct-align/1v7zA.t05-thin90.a2m.gz, have 134455 columns in 573 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jixA/nostruct-align/1jixA.t05-thin90.a2m.gz # 1jixA.t05-thin90.a2m with 90 sequences, total weight= 90 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.997285 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jixA/info/1jixA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jixA/nostruct-align/1jixA.t05-thin90.a2m.gz, have 134806 columns in 574 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v37A/nostruct-align/1v37A.t05-thin90.a2m.gz # 1v37A.t05-thin90.a2m with 1297 sequences, total weight= 1297 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10768 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v37A/info/1v37A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v37A/nostruct-align/1v37A.t05-thin90.a2m.gz, have 134977 columns in 575 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lbu/nostruct-align/1lbu.t05-thin90.a2m.gz # 1lbu.t05-thin90.a2m with 363 sequences, total weight= 363 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04773 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lbu/info/1lbu.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lbu/nostruct-align/1lbu.t05-thin90.a2m.gz, have 135190 columns in 576 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qd1A/nostruct-align/1qd1A.t05-thin90.a2m.gz # 1qd1A.t05-thin90.a2m with 42 sequences, total weight= 12.2862 avg weight= 0.292528 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qd1A/info/1qd1A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qd1A/nostruct-align/1qd1A.t05-thin90.a2m.gz, have 135509 columns in 577 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ezwA/nostruct-align/1ezwA.t05-thin90.a2m.gz # 1ezwA.t05-thin90.a2m with 1007 sequences, total weight= 1007 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11969 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ezwA/info/1ezwA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ezwA/nostruct-align/1ezwA.t05-thin90.a2m.gz, have 135856 columns in 578 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t6uA/nostruct-align/1t6uA.t05-thin90.a2m.gz # 1t6uA.t05-thin90.a2m with 13 sequences, total weight= 4.54698 avg weight= 0.349767 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t6uA/info/1t6uA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t6uA/nostruct-align/1t6uA.t05-thin90.a2m.gz, have 135973 columns in 579 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ekqA/nostruct-align/1ekqA.t05-thin90.a2m.gz # 1ekqA.t05-thin90.a2m with 1567 sequences, total weight= 1567 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.976111 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ekqA/info/1ekqA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ekqA/nostruct-align/1ekqA.t05-thin90.a2m.gz, have 136227 columns in 580 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kxoA/nostruct-align/1kxoA.t05-thin90.a2m.gz # 1kxoA.t05-thin90.a2m with 478 sequences, total weight= 478 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.957724 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kxoA/info/1kxoA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kxoA/nostruct-align/1kxoA.t05-thin90.a2m.gz, have 136392 columns in 581 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lriA/nostruct-align/1lriA.t05-thin90.a2m.gz # 1lriA.t05-thin90.a2m with 35 sequences, total weight= 6.12539 avg weight= 0.175011 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lriA/info/1lriA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lriA/nostruct-align/1lriA.t05-thin90.a2m.gz, have 136490 columns in 582 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lvmA/nostruct-align/1lvmA.t05-thin90.a2m.gz # 1lvmA.t05-thin90.a2m with 366 sequences, total weight= 366 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06302 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lvmA/info/1lvmA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lvmA/nostruct-align/1lvmA.t05-thin90.a2m.gz, have 136719 columns in 583 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1ta8A/nostruct-align/1ta8A.t05-thin90.a2m.gz # 1ta8A.t05-thin90.a2m with 289 sequences, total weight= 27.0104 avg weight= 0.0934617 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1ta8A/info/1ta8A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1ta8A/nostruct-align/1ta8A.t05-thin90.a2m.gz, have 137032 columns in 584 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gwyA/nostruct-align/1gwyA.t05-thin90.a2m.gz # 1gwyA.t05-thin90.a2m with 19 sequences, total weight= 9.01131 avg weight= 0.474279 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gwyA/info/1gwyA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gwyA/nostruct-align/1gwyA.t05-thin90.a2m.gz, have 137207 columns in 585 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dzkA/nostruct-align/1dzkA.t05-thin90.a2m.gz # 1dzkA.t05-thin90.a2m with 274 sequences, total weight= 274 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05652 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dzkA/info/1dzkA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dzkA/nostruct-align/1dzkA.t05-thin90.a2m.gz, have 137355 columns in 586 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wkcA/nostruct-align/1wkcA.t05-thin90.a2m.gz # 1wkcA.t05-thin90.a2m with 300 sequences, total weight= 235.644 avg weight= 0.785479 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30258 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wkcA/info/1wkcA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wkcA/nostruct-align/1wkcA.t05-thin90.a2m.gz, have 137523 columns in 587 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d5tA/nostruct-align/1d5tA.t05-thin90.a2m.gz # 1d5tA.t05-thin90.a2m with 8255 sequences, total weight= 8255 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.904742 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d5tA/info/1d5tA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d5tA/nostruct-align/1d5tA.t05-thin90.a2m.gz, have 137956 columns in 588 chains # command:CPU_time= 2973.47 sec, elapsed time= 3019.5 sec) # command:# command:# Prefix for input files set to /cse/faculty/karplus/dna/predict-2nd/testing/training-data/ # command:# reading script from file dunbrack-30pc-1763-3.t05-thin90-o_notor2 # Prefix for input files set to # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/4u/4ubpA/nostruct-align/4ubpA.t05-thin90.a2m.gz # 4ubpA.t05-thin90.a2m with 104 sequences, total weight= 5.76061 avg weight= 0.0553905 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/4u/4ubpA/info/4ubpA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/4u/4ubpA/nostruct-align/4ubpA.t05-thin90.a2m.gz, have 100 columns in 1 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kngA/nostruct-align/1kngA.t05-thin90.a2m.gz # 1kngA.t05-thin90.a2m with 4120 sequences, total weight= 4120 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.932247 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kngA/info/1kngA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kngA/nostruct-align/1kngA.t05-thin90.a2m.gz, have 244 columns in 2 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jnrA/nostruct-align/1jnrA.t05-thin90.a2m.gz # 1jnrA.t05-thin90.a2m with 7218 sequences, total weight= 7218 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00184 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jnrA/info/1jnrA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jnrA/nostruct-align/1jnrA.t05-thin90.a2m.gz, have 886 columns in 3 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yc5A/nostruct-align/1yc5A.t05-thin90.a2m.gz # 1yc5A.t05-thin90.a2m with 475 sequences, total weight= 475 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27249 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yc5A/info/1yc5A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1yc5A/nostruct-align/1yc5A.t05-thin90.a2m.gz, have 1120 columns in 4 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w2wB/nostruct-align/1w2wB.t05-thin90.a2m.gz # 1w2wB.t05-thin90.a2m with 271 sequences, total weight= 139.972 avg weight= 0.516501 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30252 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w2wB/info/1w2wB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w2wB/nostruct-align/1w2wB.t05-thin90.a2m.gz, have 1311 columns in 5 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o3uA/nostruct-align/1o3uA.t05-thin90.a2m.gz # 1o3uA.t05-thin90.a2m with 108 sequences, total weight= 108 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17315 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o3uA/info/1o3uA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o3uA/nostruct-align/1o3uA.t05-thin90.a2m.gz, have 1431 columns in 6 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e19A/nostruct-align/1e19A.t05-thin90.a2m.gz # 1e19A.t05-thin90.a2m with 912 sequences, total weight= 912 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19861 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e19A/info/1e19A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e19A/nostruct-align/1e19A.t05-thin90.a2m.gz, have 1744 columns in 7 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1z8kA/nostruct-align/1z8kA.t05-thin90.a2m.gz # 1z8kA.t05-thin90.a2m with 11 sequences, total weight= 2.50949 avg weight= 0.228136 13 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1z8kA/info/1z8kA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1z/1z8kA/nostruct-align/1z8kA.t05-thin90.a2m.gz, have 1918 columns in 8 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mtpA/nostruct-align/1mtpA.t05-thin90.a2m.gz # 1mtpA.t05-thin90.a2m with 817 sequences, total weight= 411.597 avg weight= 0.50379 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31231 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mtpA/info/1mtpA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mtpA/nostruct-align/1mtpA.t05-thin90.a2m.gz, have 2238 columns in 9 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ijyA/nostruct-align/1ijyA.t05-thin90.a2m.gz # 1ijyA.t05-thin90.a2m with 179 sequences, total weight= 67.6333 avg weight= 0.37784 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30084 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ijyA/info/1ijyA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ijyA/nostruct-align/1ijyA.t05-thin90.a2m.gz, have 2360 columns in 10 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pg4A/nostruct-align/1pg4A.t05-thin90.a2m.gz # 1pg4A.t05-thin90.a2m with 5633 sequences, total weight= 5633 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0528 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pg4A/info/1pg4A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pg4A/nostruct-align/1pg4A.t05-thin90.a2m.gz, have 2993 columns in 11 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f5nA/nostruct-align/1f5nA.t05-thin90.a2m.gz # 1f5nA.t05-thin90.a2m with 410 sequences, total weight= 410 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04863 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f5nA/info/1f5nA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f5nA/nostruct-align/1f5nA.t05-thin90.a2m.gz, have 3563 columns in 12 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b5eA/nostruct-align/1b5eA.t05-thin90.a2m.gz # 1b5eA.t05-thin90.a2m with 265 sequences, total weight= 54.8156 avg weight= 0.206851 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b5eA/info/1b5eA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1b5eA/nostruct-align/1b5eA.t05-thin90.a2m.gz, have 3804 columns in 13 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gy7A/nostruct-align/1gy7A.t05-thin90.a2m.gz # 1gy7A.t05-thin90.a2m with 151 sequences, total weight= 126.225 avg weight= 0.835924 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30071 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gy7A/info/1gy7A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gy7A/nostruct-align/1gy7A.t05-thin90.a2m.gz, have 3925 columns in 14 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a3aA/nostruct-align/1a3aA.t05-thin90.a2m.gz # 1a3aA.t05-thin90.a2m with 521 sequences, total weight= 521 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23239 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a3aA/info/1a3aA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1a3aA/nostruct-align/1a3aA.t05-thin90.a2m.gz, have 4070 columns in 15 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w1oA/nostruct-align/1w1oA.t05-thin90.a2m.gz # 1w1oA.t05-thin90.a2m with 1475 sequences, total weight= 1475 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.903023 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w1oA/info/1w1oA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w1oA/nostruct-align/1w1oA.t05-thin90.a2m.gz, have 4549 columns in 16 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gvdA/nostruct-align/1gvdA.t05-thin90.a2m.gz # 1gvdA.t05-thin90.a2m with 808 sequences, total weight= 33.7987 avg weight= 0.0418301 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30048 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gvdA/info/1gvdA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gvdA/nostruct-align/1gvdA.t05-thin90.a2m.gz, have 4601 columns in 17 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uj2A/nostruct-align/1uj2A.t05-thin90.a2m.gz # 1uj2A.t05-thin90.a2m with 3802 sequences, total weight= 3802 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.842015 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uj2A/info/1uj2A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uj2A/nostruct-align/1uj2A.t05-thin90.a2m.gz, have 4814 columns in 18 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l7aA/nostruct-align/1l7aA.t05-thin90.a2m.gz # 1l7aA.t05-thin90.a2m with 10972 sequences, total weight= 10972 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.638891 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l7aA/info/1l7aA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1l7aA/nostruct-align/1l7aA.t05-thin90.a2m.gz, have 5132 columns in 19 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kmtA/nostruct-align/1kmtA.t05-thin90.a2m.gz # 1kmtA.t05-thin90.a2m with 66 sequences, total weight= 17.2552 avg weight= 0.261443 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kmtA/info/1kmtA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kmtA/nostruct-align/1kmtA.t05-thin90.a2m.gz, have 5270 columns in 20 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bkxA/nostruct-align/2bkxA.t05-thin90.a2m.gz # 2bkxA.t05-thin90.a2m with 393 sequences, total weight= 156.476 avg weight= 0.398157 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30617 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bkxA/info/2bkxA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2b/2bkxA/nostruct-align/2bkxA.t05-thin90.a2m.gz, have 5512 columns in 21 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1ji1A/nostruct-align/1ji1A.t05-thin90.a2m.gz # 1ji1A.t05-thin90.a2m with 1829 sequences, total weight= 1829 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03892 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1ji1A/info/1ji1A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1ji1A/nostruct-align/1ji1A.t05-thin90.a2m.gz, have 6149 columns in 22 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1luqA/nostruct-align/1luqA.t05-thin90.a2m.gz # 1luqA.t05-thin90.a2m with 40 sequences, total weight= 18.2846 avg weight= 0.457114 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1luqA/info/1luqA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1luqA/nostruct-align/1luqA.t05-thin90.a2m.gz, have 6268 columns in 23 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h2wA/nostruct-align/1h2wA.t05-thin90.a2m.gz # 1h2wA.t05-thin90.a2m with 7651 sequences, total weight= 7651 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.820656 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h2wA/info/1h2wA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h2wA/nostruct-align/1h2wA.t05-thin90.a2m.gz, have 6978 columns in 24 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wvfA/nostruct-align/1wvfA.t05-thin90.a2m.gz # 1wvfA.t05-thin90.a2m with 1497 sequences, total weight= 1497 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.886949 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wvfA/info/1wvfA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wvfA/nostruct-align/1wvfA.t05-thin90.a2m.gz, have 7493 columns in 25 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h2bA/nostruct-align/1h2bA.t05-thin90.a2m.gz # 1h2bA.t05-thin90.a2m with 3717 sequences, total weight= 3717 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18251 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h2bA/info/1h2bA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h2bA/nostruct-align/1h2bA.t05-thin90.a2m.gz, have 7836 columns in 26 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bupA/nostruct-align/1bupA.t05-thin90.a2m.gz # 1bupA.t05-thin90.a2m with 1677 sequences, total weight= 1677 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21293 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bupA/info/1bupA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bupA/nostruct-align/1bupA.t05-thin90.a2m.gz, have 8214 columns in 27 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lm4A/nostruct-align/1lm4A.t05-thin90.a2m.gz # 1lm4A.t05-thin90.a2m with 389 sequences, total weight= 87.7738 avg weight= 0.22564 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30424 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lm4A/info/1lm4A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lm4A/nostruct-align/1lm4A.t05-thin90.a2m.gz, have 8404 columns in 28 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gsoA/nostruct-align/1gsoA.t05-thin90.a2m.gz # 1gsoA.t05-thin90.a2m with 2823 sequences, total weight= 2823 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0479 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gsoA/info/1gsoA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gsoA/nostruct-align/1gsoA.t05-thin90.a2m.gz, have 8823 columns in 29 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d0cA/nostruct-align/1d0cA.t05-thin90.a2m.gz # 1d0cA.t05-thin90.a2m with 83 sequences, total weight= 7.90956 avg weight= 0.0952958 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d0cA/info/1d0cA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d0cA/nostruct-align/1d0cA.t05-thin90.a2m.gz, have 9239 columns in 30 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oaa/nostruct-align/1oaa.t05-thin90.a2m.gz # 1oaa.t05-thin90.a2m with 9220 sequences, total weight= 9220 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11006 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oaa/info/1oaa.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oaa/nostruct-align/1oaa.t05-thin90.a2m.gz, have 9498 columns in 31 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gq6A/nostruct-align/1gq6A.t05-thin90.a2m.gz # 1gq6A.t05-thin90.a2m with 413 sequences, total weight= 413 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25687 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gq6A/info/1gq6A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gq6A/nostruct-align/1gq6A.t05-thin90.a2m.gz, have 9793 columns in 32 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ubkL/nostruct-align/1ubkL.t05-thin90.a2m.gz # 1ubkL.t05-thin90.a2m with 488 sequences, total weight= 488 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28525 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ubkL/info/1ubkL.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ubkL/nostruct-align/1ubkL.t05-thin90.a2m.gz, have 10327 columns in 33 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uekA/nostruct-align/1uekA.t05-thin90.a2m.gz # 1uekA.t05-thin90.a2m with 975 sequences, total weight= 975 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04115 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uekA/info/1uekA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uekA/nostruct-align/1uekA.t05-thin90.a2m.gz, have 10595 columns in 34 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wdvA/nostruct-align/1wdvA.t05-thin90.a2m.gz # 1wdvA.t05-thin90.a2m with 460 sequences, total weight= 460 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21372 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wdvA/info/1wdvA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wdvA/nostruct-align/1wdvA.t05-thin90.a2m.gz, have 10745 columns in 35 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kjlA/nostruct-align/1kjlA.t05-thin90.a2m.gz # 1kjlA.t05-thin90.a2m with 318 sequences, total weight= 287.446 avg weight= 0.903919 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30116 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kjlA/info/1kjlA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kjlA/nostruct-align/1kjlA.t05-thin90.a2m.gz, have 10883 columns in 36 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g2rA/nostruct-align/1g2rA.t05-thin90.a2m.gz # 1g2rA.t05-thin90.a2m with 118 sequences, total weight= 62.3197 avg weight= 0.528133 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30048 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g2rA/info/1g2rA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g2rA/nostruct-align/1g2rA.t05-thin90.a2m.gz, have 10977 columns in 37 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s7kA/nostruct-align/1s7kA.t05-thin90.a2m.gz # 1s7kA.t05-thin90.a2m with 5449 sequences, total weight= 5449 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.80164 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s7kA/info/1s7kA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s7kA/nostruct-align/1s7kA.t05-thin90.a2m.gz, have 11135 columns in 38 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g5tA/nostruct-align/1g5tA.t05-thin90.a2m.gz # 1g5tA.t05-thin90.a2m with 166 sequences, total weight= 17.7026 avg weight= 0.106642 42 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g5tA/info/1g5tA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g5tA/nostruct-align/1g5tA.t05-thin90.a2m.gz, have 11292 columns in 39 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e0tA/nostruct-align/1e0tA.t05-thin90.a2m.gz # 1e0tA.t05-thin90.a2m with 426 sequences, total weight= 34.2458 avg weight= 0.0803891 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e0tA/info/1e0tA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e0tA/nostruct-align/1e0tA.t05-thin90.a2m.gz, have 11738 columns in 40 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p0hA/nostruct-align/1p0hA.t05-thin90.a2m.gz # 1p0hA.t05-thin90.a2m with 5882 sequences, total weight= 5882 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.662395 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p0hA/info/1p0hA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p0hA/nostruct-align/1p0hA.t05-thin90.a2m.gz, have 12028 columns in 41 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1molA/nostruct-align/1molA.t05-thin90.a2m.gz # 1molA.t05-thin90.a2m with 3 sequences, total weight= 2.65834 avg weight= 0.886113 6 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1molA/info/1molA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1molA/nostruct-align/1molA.t05-thin90.a2m.gz, have 12122 columns in 42 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1osyA/nostruct-align/1osyA.t05-thin90.a2m.gz # 1osyA.t05-thin90.a2m with 3 sequences, total weight= 2.24944 avg weight= 0.749813 7 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1osyA/info/1osyA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1osyA/nostruct-align/1osyA.t05-thin90.a2m.gz, have 12236 columns in 43 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sbp/nostruct-align/1sbp.t05-thin90.a2m.gz # 1sbp.t05-thin90.a2m with 2116 sequences, total weight= 2116 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.809092 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sbp/info/1sbp.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sbp/nostruct-align/1sbp.t05-thin90.a2m.gz, have 12545 columns in 44 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pvgA/nostruct-align/1pvgA.t05-thin90.a2m.gz # 1pvgA.t05-thin90.a2m with 908 sequences, total weight= 100.785 avg weight= 0.110996 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30361 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pvgA/info/1pvgA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pvgA/nostruct-align/1pvgA.t05-thin90.a2m.gz, have 12923 columns in 45 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1st9A/nostruct-align/1st9A.t05-thin90.a2m.gz # 1st9A.t05-thin90.a2m with 3943 sequences, total weight= 3943 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.981517 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1st9A/info/1st9A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1st9A/nostruct-align/1st9A.t05-thin90.a2m.gz, have 13060 columns in 46 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f1eA/nostruct-align/1f1eA.t05-thin90.a2m.gz # 1f1eA.t05-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.601427 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f1eA/info/1f1eA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f1eA/nostruct-align/1f1eA.t05-thin90.a2m.gz, have 13211 columns in 47 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ikpA/nostruct-align/1ikpA.t05-thin90.a2m.gz # 1ikpA.t05-thin90.a2m with 425 sequences, total weight= 61.5775 avg weight= 0.144888 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ikpA/info/1ikpA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ikpA/nostruct-align/1ikpA.t05-thin90.a2m.gz, have 13810 columns in 48 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1swxA/nostruct-align/1swxA.t05-thin90.a2m.gz # 1swxA.t05-thin90.a2m with 90 sequences, total weight= 56.3772 avg weight= 0.626413 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1swxA/info/1swxA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1swxA/nostruct-align/1swxA.t05-thin90.a2m.gz, have 14008 columns in 49 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uozA/nostruct-align/1uozA.t05-thin90.a2m.gz # 1uozA.t05-thin90.a2m with 82 sequences, total weight= 22.2103 avg weight= 0.270857 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uozA/info/1uozA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uozA/nostruct-align/1uozA.t05-thin90.a2m.gz, have 14308 columns in 50 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1id0A/nostruct-align/1id0A.t05-thin90.a2m.gz # 1id0A.t05-thin90.a2m with 6908 sequences, total weight= 6908 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21916 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1id0A/info/1id0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1id0A/nostruct-align/1id0A.t05-thin90.a2m.gz, have 14454 columns in 51 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2m/2mcm/nostruct-align/2mcm.t05-thin90.a2m.gz # 2mcm.t05-thin90.a2m with 6 sequences, total weight= 3.59343 avg weight= 0.598905 13 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2m/2mcm/info/2mcm.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2m/2mcm/nostruct-align/2mcm.t05-thin90.a2m.gz, have 14566 columns in 52 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a12A/nostruct-align/1a12A.t05-thin90.a2m.gz # 1a12A.t05-thin90.a2m with 715 sequences, total weight= 715 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01206 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a12A/info/1a12A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1a12A/nostruct-align/1a12A.t05-thin90.a2m.gz, have 14967 columns in 53 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k2xA/nostruct-align/1k2xA.t05-thin90.a2m.gz # 1k2xA.t05-thin90.a2m with 159 sequences, total weight= 33.6592 avg weight= 0.211693 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k2xA/info/1k2xA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k2xA/nostruct-align/1k2xA.t05-thin90.a2m.gz, have 15123 columns in 54 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jp4A/nostruct-align/1jp4A.t05-thin90.a2m.gz # 1jp4A.t05-thin90.a2m with 912 sequences, total weight= 912 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08891 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jp4A/info/1jp4A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jp4A/nostruct-align/1jp4A.t05-thin90.a2m.gz, have 15425 columns in 55 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sjyA/nostruct-align/1sjyA.t05-thin90.a2m.gz # 1sjyA.t05-thin90.a2m with 2543 sequences, total weight= 2543 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.856414 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sjyA/info/1sjyA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sjyA/nostruct-align/1sjyA.t05-thin90.a2m.gz, have 15579 columns in 56 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nu4A/nostruct-align/1nu4A.t05-thin90.a2m.gz # 1nu4A.t05-thin90.a2m with 5045 sequences, total weight= 5045 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12109 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nu4A/info/1nu4A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nu4A/nostruct-align/1nu4A.t05-thin90.a2m.gz, have 15670 columns in 57 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j77A/nostruct-align/1j77A.t05-thin90.a2m.gz # 1j77A.t05-thin90.a2m with 135 sequences, total weight= 135 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24626 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j77A/info/1j77A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j77A/nostruct-align/1j77A.t05-thin90.a2m.gz, have 15869 columns in 58 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1btkA/nostruct-align/1btkA.t05-thin90.a2m.gz # 1btkA.t05-thin90.a2m with 418 sequences, total weight= 418 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10334 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1btkA/info/1btkA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1btkA/nostruct-align/1btkA.t05-thin90.a2m.gz, have 16029 columns in 59 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kq1A/nostruct-align/1kq1A.t05-thin90.a2m.gz # 1kq1A.t05-thin90.a2m with 61 sequences, total weight= 7.41167 avg weight= 0.121503 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kq1A/info/1kq1A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kq1A/nostruct-align/1kq1A.t05-thin90.a2m.gz, have 16089 columns in 60 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1ktgA/nostruct-align/1ktgA.t05-thin90.a2m.gz # 1ktgA.t05-thin90.a2m with 2515 sequences, total weight= 2515 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.923664 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1ktgA/info/1ktgA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1ktgA/nostruct-align/1ktgA.t05-thin90.a2m.gz, have 16226 columns in 61 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ockA/nostruct-align/1ockA.t05-thin90.a2m.gz # 1ockA.t05-thin90.a2m with 961 sequences, total weight= 374.301 avg weight= 0.389491 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31688 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ockA/info/1ockA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ockA/nostruct-align/1ockA.t05-thin90.a2m.gz, have 16638 columns in 62 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nkgA/nostruct-align/1nkgA.t05-thin90.a2m.gz # 1nkgA.t05-thin90.a2m with 41 sequences, total weight= 19.7144 avg weight= 0.48084 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nkgA/info/1nkgA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nkgA/nostruct-align/1nkgA.t05-thin90.a2m.gz, have 17146 columns in 63 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y80A/nostruct-align/1y80A.t05-thin90.a2m.gz # 1y80A.t05-thin90.a2m with 373 sequences, total weight= 74.2836 avg weight= 0.199152 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30208 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y80A/info/1y80A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1y80A/nostruct-align/1y80A.t05-thin90.a2m.gz, have 17271 columns in 64 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f60B/nostruct-align/1f60B.t05-thin90.a2m.gz # 1f60B.t05-thin90.a2m with 84 sequences, total weight= 10.3708 avg weight= 0.123462 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f60B/info/1f60B.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f60B/nostruct-align/1f60B.t05-thin90.a2m.gz, have 17361 columns in 65 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vcc/nostruct-align/1vcc.t05-thin90.a2m.gz # 1vcc.t05-thin90.a2m with 13 sequences, total weight= 3.1011 avg weight= 0.238546 14 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vcc/info/1vcc.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vcc/nostruct-align/1vcc.t05-thin90.a2m.gz, have 17438 columns in 66 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k3yA/nostruct-align/1k3yA.t05-thin90.a2m.gz # 1k3yA.t05-thin90.a2m with 2561 sequences, total weight= 2561 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.984618 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k3yA/info/1k3yA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k3yA/nostruct-align/1k3yA.t05-thin90.a2m.gz, have 17659 columns in 67 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l6pA/nostruct-align/1l6pA.t05-thin90.a2m.gz # 1l6pA.t05-thin90.a2m with 91 sequences, total weight= 29.4262 avg weight= 0.323365 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l6pA/info/1l6pA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1l6pA/nostruct-align/1l6pA.t05-thin90.a2m.gz, have 17780 columns in 68 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3n/3nul/nostruct-align/3nul.t05-thin90.a2m.gz # 3nul.t05-thin90.a2m with 136 sequences, total weight= 50.1147 avg weight= 0.36849 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3n/3nul/info/3nul.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/3n/3nul/nostruct-align/3nul.t05-thin90.a2m.gz, have 17910 columns in 69 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f2tB/nostruct-align/1f2tB.t05-thin90.a2m.gz # 1f2tB.t05-thin90.a2m with 19268 sequences, total weight= 19268 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18467 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f2tB/info/1f2tB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f2tB/nostruct-align/1f2tB.t05-thin90.a2m.gz, have 18053 columns in 70 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u8vA/nostruct-align/1u8vA.t05-thin90.a2m.gz # 1u8vA.t05-thin90.a2m with 2397 sequences, total weight= 2397 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05735 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u8vA/info/1u8vA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1u8vA/nostruct-align/1u8vA.t05-thin90.a2m.gz, have 18543 columns in 71 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qj4A/nostruct-align/1qj4A.t05-thin90.a2m.gz # 1qj4A.t05-thin90.a2m with 7888 sequences, total weight= 7888 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.646084 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qj4A/info/1qj4A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qj4A/nostruct-align/1qj4A.t05-thin90.a2m.gz, have 18799 columns in 72 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r5mA/nostruct-align/1r5mA.t05-thin90.a2m.gz # 1r5mA.t05-thin90.a2m with 9504 sequences, total weight= 9504 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.724876 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r5mA/info/1r5mA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r5mA/nostruct-align/1r5mA.t05-thin90.a2m.gz, have 19150 columns in 73 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o8bA/nostruct-align/1o8bA.t05-thin90.a2m.gz # 1o8bA.t05-thin90.a2m with 221 sequences, total weight= 18.1017 avg weight= 0.0819083 43 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o8bA/info/1o8bA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o8bA/nostruct-align/1o8bA.t05-thin90.a2m.gz, have 19318 columns in 74 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fg7A/nostruct-align/1fg7A.t05-thin90.a2m.gz # 1fg7A.t05-thin90.a2m with 5245 sequences, total weight= 5245 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.943418 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fg7A/info/1fg7A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fg7A/nostruct-align/1fg7A.t05-thin90.a2m.gz, have 19672 columns in 75 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x7dA/nostruct-align/1x7dA.t05-thin90.a2m.gz # 1x7dA.t05-thin90.a2m with 874 sequences, total weight= 874 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.978497 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x7dA/info/1x7dA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1x7dA/nostruct-align/1x7dA.t05-thin90.a2m.gz, have 20012 columns in 76 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j2rA/nostruct-align/1j2rA.t05-thin90.a2m.gz # 1j2rA.t05-thin90.a2m with 733 sequences, total weight= 733 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12865 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j2rA/info/1j2rA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j2rA/nostruct-align/1j2rA.t05-thin90.a2m.gz, have 20200 columns in 77 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pbyA/nostruct-align/1pbyA.t05-thin90.a2m.gz # 1pbyA.t05-thin90.a2m with 7 sequences, total weight= 4.80589 avg weight= 0.686556 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pbyA/info/1pbyA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pbyA/nostruct-align/1pbyA.t05-thin90.a2m.gz, have 20689 columns in 78 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k5cA/nostruct-align/1k5cA.t05-thin90.a2m.gz # 1k5cA.t05-thin90.a2m with 448 sequences, total weight= 448 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19779 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k5cA/info/1k5cA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k5cA/nostruct-align/1k5cA.t05-thin90.a2m.gz, have 21022 columns in 79 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dj0A/nostruct-align/1dj0A.t05-thin90.a2m.gz # 1dj0A.t05-thin90.a2m with 400 sequences, total weight= 106.174 avg weight= 0.265435 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30648 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dj0A/info/1dj0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dj0A/nostruct-align/1dj0A.t05-thin90.a2m.gz, have 21286 columns in 80 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wpnA/nostruct-align/1wpnA.t05-thin90.a2m.gz # 1wpnA.t05-thin90.a2m with 344 sequences, total weight= 344 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15488 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wpnA/info/1wpnA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wpnA/nostruct-align/1wpnA.t05-thin90.a2m.gz, have 21473 columns in 81 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q25A/nostruct-align/1q25A.t05-thin90.a2m.gz # 1q25A.t05-thin90.a2m with 222 sequences, total weight= 222 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17008 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q25A/info/1q25A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q25A/nostruct-align/1q25A.t05-thin90.a2m.gz, have 21901 columns in 82 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sz7A/nostruct-align/1sz7A.t05-thin90.a2m.gz # 1sz7A.t05-thin90.a2m with 131 sequences, total weight= 90.7719 avg weight= 0.692915 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30032 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sz7A/info/1sz7A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sz7A/nostruct-align/1sz7A.t05-thin90.a2m.gz, have 22060 columns in 83 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hztA/nostruct-align/1hztA.t05-thin90.a2m.gz # 1hztA.t05-thin90.a2m with 2538 sequences, total weight= 2538 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.909137 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hztA/info/1hztA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hztA/nostruct-align/1hztA.t05-thin90.a2m.gz, have 22213 columns in 84 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qopB/nostruct-align/1qopB.t05-thin90.a2m.gz # 1qopB.t05-thin90.a2m with 1751 sequences, total weight= 1751 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16356 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qopB/info/1qopB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qopB/nostruct-align/1qopB.t05-thin90.a2m.gz, have 22603 columns in 85 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l3lA/nostruct-align/1l3lA.t05-thin90.a2m.gz # 1l3lA.t05-thin90.a2m with 4549 sequences, total weight= 4549 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09159 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l3lA/info/1l3lA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1l3lA/nostruct-align/1l3lA.t05-thin90.a2m.gz, have 22836 columns in 86 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ohlA/nostruct-align/1ohlA.t05-thin90.a2m.gz # 1ohlA.t05-thin90.a2m with 278 sequences, total weight= 10.4004 avg weight= 0.0374116 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ohlA/info/1ohlA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ohlA/nostruct-align/1ohlA.t05-thin90.a2m.gz, have 23176 columns in 87 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oygA/nostruct-align/1oygA.t05-thin90.a2m.gz # 1oygA.t05-thin90.a2m with 351 sequences, total weight= 351 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19678 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oygA/info/1oygA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oygA/nostruct-align/1oygA.t05-thin90.a2m.gz, have 23616 columns in 88 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1khcA/nostruct-align/1khcA.t05-thin90.a2m.gz # 1khcA.t05-thin90.a2m with 248 sequences, total weight= 248 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03111 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1khcA/info/1khcA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1khcA/nostruct-align/1khcA.t05-thin90.a2m.gz, have 23751 columns in 89 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ugpA/nostruct-align/1ugpA.t05-thin90.a2m.gz # 1ugpA.t05-thin90.a2m with 36 sequences, total weight= 7.53021 avg weight= 0.209172 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ugpA/info/1ugpA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ugpA/nostruct-align/1ugpA.t05-thin90.a2m.gz, have 23954 columns in 90 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rmwA/nostruct-align/1rmwA.t05-thin90.a2m.gz # 1rmwA.t05-thin90.a2m with 98 sequences, total weight= 98 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25091 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rmwA/info/1rmwA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rmwA/nostruct-align/1rmwA.t05-thin90.a2m.gz, have 24165 columns in 91 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m93B/nostruct-align/1m93B.t05-thin90.a2m.gz # 1m93B.t05-thin90.a2m with 733 sequences, total weight= 227.59 avg weight= 0.310491 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31234 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m93B/info/1m93B.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m93B/nostruct-align/1m93B.t05-thin90.a2m.gz, have 24410 columns in 92 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vr7A/nostruct-align/1vr7A.t05-thin90.a2m.gz # 1vr7A.t05-thin90.a2m with 90 sequences, total weight= 22.6395 avg weight= 0.25155 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vr7A/info/1vr7A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vr7A/nostruct-align/1vr7A.t05-thin90.a2m.gz, have 24530 columns in 93 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1ve1A/nostruct-align/1ve1A.t05-thin90.a2m.gz # 1ve1A.t05-thin90.a2m with 1706 sequences, total weight= 1706 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24642 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1ve1A/info/1ve1A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1ve1A/nostruct-align/1ve1A.t05-thin90.a2m.gz, have 24832 columns in 94 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1twyA/nostruct-align/1twyA.t05-thin90.a2m.gz # 1twyA.t05-thin90.a2m with 1185 sequences, total weight= 1185 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.985877 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1twyA/info/1twyA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1twyA/nostruct-align/1twyA.t05-thin90.a2m.gz, have 25081 columns in 95 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d4tA/nostruct-align/1d4tA.t05-thin90.a2m.gz # 1d4tA.t05-thin90.a2m with 811 sequences, total weight= 811 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29475 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d4tA/info/1d4tA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d4tA/nostruct-align/1d4tA.t05-thin90.a2m.gz, have 25185 columns in 96 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2p/2pth/nostruct-align/2pth.t05-thin90.a2m.gz # 2pth.t05-thin90.a2m with 284 sequences, total weight= 35.8274 avg weight= 0.126153 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30043 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2p/2pth/info/2pth.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2p/2pth/nostruct-align/2pth.t05-thin90.a2m.gz, have 25378 columns in 97 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sg6A/nostruct-align/1sg6A.t05-thin90.a2m.gz # 1sg6A.t05-thin90.a2m with 965 sequences, total weight= 965 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17787 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sg6A/info/1sg6A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sg6A/nostruct-align/1sg6A.t05-thin90.a2m.gz, have 25755 columns in 98 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gxyA/nostruct-align/1gxyA.t05-thin90.a2m.gz # 1gxyA.t05-thin90.a2m with 67 sequences, total weight= 11.4351 avg weight= 0.170674 31 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gxyA/info/1gxyA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gxyA/nostruct-align/1gxyA.t05-thin90.a2m.gz, have 25978 columns in 99 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hh8A/nostruct-align/1hh8A.t05-thin90.a2m.gz # 1hh8A.t05-thin90.a2m with 6984 sequences, total weight= 6984 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.809933 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hh8A/info/1hh8A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hh8A/nostruct-align/1hh8A.t05-thin90.a2m.gz, have 26170 columns in 100 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1df4A/nostruct-align/1df4A.t05-thin90.a2m.gz # 1df4A.t05-thin90.a2m with 868 sequences, total weight= 8.38771 avg weight= 0.00966326 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1df4A/info/1df4A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1df4A/nostruct-align/1df4A.t05-thin90.a2m.gz, have 26227 columns in 101 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kyhA/nostruct-align/1kyhA.t05-thin90.a2m.gz # 1kyhA.t05-thin90.a2m with 1759 sequences, total weight= 1759 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.969782 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kyhA/info/1kyhA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kyhA/nostruct-align/1kyhA.t05-thin90.a2m.gz, have 26495 columns in 102 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u84A/nostruct-align/1u84A.t05-thin90.a2m.gz # 1u84A.t05-thin90.a2m with 4 sequences, total weight= 3.49219 avg weight= 0.873046 12 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u84A/info/1u84A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1u84A/nostruct-align/1u84A.t05-thin90.a2m.gz, have 26576 columns in 103 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nu0A/nostruct-align/1nu0A.t05-thin90.a2m.gz # 1nu0A.t05-thin90.a2m with 237 sequences, total weight= 39.7778 avg weight= 0.167839 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30054 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nu0A/info/1nu0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nu0A/nostruct-align/1nu0A.t05-thin90.a2m.gz, have 26707 columns in 104 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t05-thin90.a2m.gz # 1dciA.t05-thin90.a2m with 2099 sequences, total weight= 2099 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14994 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t05-thin90.a2m.gz, have 26982 columns in 105 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xdnA/nostruct-align/1xdnA.t05-thin90.a2m.gz # 1xdnA.t05-thin90.a2m with 12 sequences, total weight= 8.12669 avg weight= 0.677224 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xdnA/info/1xdnA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xdnA/nostruct-align/1xdnA.t05-thin90.a2m.gz, have 27247 columns in 106 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tr9A/nostruct-align/1tr9A.t05-thin90.a2m.gz # 1tr9A.t05-thin90.a2m with 608 sequences, total weight= 549.058 avg weight= 0.903056 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30189 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tr9A/info/1tr9A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tr9A/nostruct-align/1tr9A.t05-thin90.a2m.gz, have 27577 columns in 107 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k6kA/nostruct-align/1k6kA.t05-thin90.a2m.gz # 1k6kA.t05-thin90.a2m with 146 sequences, total weight= 46.1631 avg weight= 0.316186 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30034 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k6kA/info/1k6kA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k6kA/nostruct-align/1k6kA.t05-thin90.a2m.gz, have 27719 columns in 108 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h4rA/nostruct-align/1h4rA.t05-thin90.a2m.gz # 1h4rA.t05-thin90.a2m with 599 sequences, total weight= 599 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08968 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h4rA/info/1h4rA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h4rA/nostruct-align/1h4rA.t05-thin90.a2m.gz, have 28013 columns in 109 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ryiA/nostruct-align/1ryiA.t05-thin90.a2m.gz # 1ryiA.t05-thin90.a2m with 8972 sequences, total weight= 8972 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.717378 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ryiA/info/1ryiA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1ryiA/nostruct-align/1ryiA.t05-thin90.a2m.gz, have 28377 columns in 110 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j30A/nostruct-align/1j30A.t05-thin90.a2m.gz # 1j30A.t05-thin90.a2m with 126 sequences, total weight= 35.8287 avg weight= 0.284354 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j30A/info/1j30A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j30A/nostruct-align/1j30A.t05-thin90.a2m.gz, have 28518 columns in 111 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ezgA/nostruct-align/1ezgA.t05-thin90.a2m.gz # 1ezgA.t05-thin90.a2m with 18 sequences, total weight= 2.69035 avg weight= 0.149464 15 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ezgA/info/1ezgA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ezgA/nostruct-align/1ezgA.t05-thin90.a2m.gz, have 28600 columns in 112 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nzjA/nostruct-align/1nzjA.t05-thin90.a2m.gz # 1nzjA.t05-thin90.a2m with 1063 sequences, total weight= 1063 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14119 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nzjA/info/1nzjA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nzjA/nostruct-align/1nzjA.t05-thin90.a2m.gz, have 28873 columns in 113 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n62C/nostruct-align/1n62C.t05-thin90.a2m.gz # 1n62C.t05-thin90.a2m with 335 sequences, total weight= 178.955 avg weight= 0.534194 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30425 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n62C/info/1n62C.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n62C/nostruct-align/1n62C.t05-thin90.a2m.gz, have 29159 columns in 114 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t3iA/nostruct-align/1t3iA.t05-thin90.a2m.gz # 1t3iA.t05-thin90.a2m with 8439 sequences, total weight= 8439 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.814765 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t3iA/info/1t3iA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t3iA/nostruct-align/1t3iA.t05-thin90.a2m.gz, have 29565 columns in 115 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tzvA/nostruct-align/1tzvA.t05-thin90.a2m.gz # 1tzvA.t05-thin90.a2m with 402 sequences, total weight= 402 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27437 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tzvA/info/1tzvA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tzvA/nostruct-align/1tzvA.t05-thin90.a2m.gz, have 29706 columns in 116 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nuyA/nostruct-align/1nuyA.t05-thin90.a2m.gz # 1nuyA.t05-thin90.a2m with 531 sequences, total weight= 471.734 avg weight= 0.888388 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30169 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nuyA/info/1nuyA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nuyA/nostruct-align/1nuyA.t05-thin90.a2m.gz, have 30034 columns in 117 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xocA/nostruct-align/1xocA.t05-thin90.a2m.gz # 1xocA.t05-thin90.a2m with 1452 sequences, total weight= 1452 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07513 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xocA/info/1xocA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xocA/nostruct-align/1xocA.t05-thin90.a2m.gz, have 30538 columns in 118 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k0mA/nostruct-align/1k0mA.t05-thin90.a2m.gz # 1k0mA.t05-thin90.a2m with 2658 sequences, total weight= 2658 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.928394 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k0mA/info/1k0mA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k0mA/nostruct-align/1k0mA.t05-thin90.a2m.gz, have 30773 columns in 119 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v5dA/nostruct-align/1v5dA.t05-thin90.a2m.gz # 1v5dA.t05-thin90.a2m with 73 sequences, total weight= 73 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16493 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v5dA/info/1v5dA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v5dA/nostruct-align/1v5dA.t05-thin90.a2m.gz, have 31159 columns in 120 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ekgA/nostruct-align/1ekgA.t05-thin90.a2m.gz # 1ekgA.t05-thin90.a2m with 98 sequences, total weight= 33.3506 avg weight= 0.340312 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ekgA/info/1ekgA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ekgA/nostruct-align/1ekgA.t05-thin90.a2m.gz, have 31278 columns in 121 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v33A/nostruct-align/1v33A.t05-thin90.a2m.gz # 1v33A.t05-thin90.a2m with 122 sequences, total weight= 122 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2493 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v33A/info/1v33A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v33A/nostruct-align/1v33A.t05-thin90.a2m.gz, have 31624 columns in 122 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1es5A/nostruct-align/1es5A.t05-thin90.a2m.gz # 1es5A.t05-thin90.a2m with 784 sequences, total weight= 784 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06097 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1es5A/info/1es5A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1es5A/nostruct-align/1es5A.t05-thin90.a2m.gz, have 31884 columns in 123 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m7yA/nostruct-align/1m7yA.t05-thin90.a2m.gz # 1m7yA.t05-thin90.a2m with 4612 sequences, total weight= 4612 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.968696 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m7yA/info/1m7yA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m7yA/nostruct-align/1m7yA.t05-thin90.a2m.gz, have 32308 columns in 124 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qauA/nostruct-align/1qauA.t05-thin90.a2m.gz # 1qauA.t05-thin90.a2m with 2299 sequences, total weight= 2299 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1056 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qauA/info/1qauA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qauA/nostruct-align/1qauA.t05-thin90.a2m.gz, have 32420 columns in 125 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vrmA/nostruct-align/1vrmA.t05-thin90.a2m.gz # 1vrmA.t05-thin90.a2m with 207 sequences, total weight= 102.293 avg weight= 0.494167 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30204 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vrmA/info/1vrmA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vrmA/nostruct-align/1vrmA.t05-thin90.a2m.gz, have 32729 columns in 126 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1ne2A/nostruct-align/1ne2A.t05-thin90.a2m.gz # 1ne2A.t05-thin90.a2m with 10336 sequences, total weight= 10336 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.628683 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1ne2A/info/1ne2A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1ne2A/nostruct-align/1ne2A.t05-thin90.a2m.gz, have 32905 columns in 127 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e6cA/nostruct-align/1e6cA.t05-thin90.a2m.gz # 1e6cA.t05-thin90.a2m with 6445 sequences, total weight= 6445 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.784522 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e6cA/info/1e6cA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e6cA/nostruct-align/1e6cA.t05-thin90.a2m.gz, have 33075 columns in 128 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ooyA/nostruct-align/1ooyA.t05-thin90.a2m.gz # 1ooyA.t05-thin90.a2m with 576 sequences, total weight= 576 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29528 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ooyA/info/1ooyA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ooyA/nostruct-align/1ooyA.t05-thin90.a2m.gz, have 33538 columns in 129 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ojrA/nostruct-align/1ojrA.t05-thin90.a2m.gz # 1ojrA.t05-thin90.a2m with 482 sequences, total weight= 482 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10761 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ojrA/info/1ojrA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ojrA/nostruct-align/1ojrA.t05-thin90.a2m.gz, have 33812 columns in 130 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xauA/nostruct-align/1xauA.t05-thin90.a2m.gz # 1xauA.t05-thin90.a2m with 4 sequences, total weight= 2.79516 avg weight= 0.69879 10 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xauA/info/1xauA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xauA/nostruct-align/1xauA.t05-thin90.a2m.gz, have 33916 columns in 131 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sbxA/nostruct-align/1sbxA.t05-thin90.a2m.gz # 1sbxA.t05-thin90.a2m with 42 sequences, total weight= 7.94197 avg weight= 0.189094 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sbxA/info/1sbxA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sbxA/nostruct-align/1sbxA.t05-thin90.a2m.gz, have 34022 columns in 132 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h4pA/nostruct-align/1h4pA.t05-thin90.a2m.gz # 1h4pA.t05-thin90.a2m with 1893 sequences, total weight= 1893 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.944379 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h4pA/info/1h4pA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h4pA/nostruct-align/1h4pA.t05-thin90.a2m.gz, have 34430 columns in 133 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xs0A/nostruct-align/1xs0A.t05-thin90.a2m.gz # 1xs0A.t05-thin90.a2m with 16 sequences, total weight= 10.3338 avg weight= 0.645863 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xs0A/info/1xs0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xs0A/nostruct-align/1xs0A.t05-thin90.a2m.gz, have 34558 columns in 134 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sx5A/nostruct-align/1sx5A.t05-thin90.a2m.gz # 1sx5A.t05-thin90.a2m with 3 sequences, total weight= 3 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17627 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sx5A/info/1sx5A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sx5A/nostruct-align/1sx5A.t05-thin90.a2m.gz, have 34802 columns in 135 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qy1A/nostruct-align/1qy1A.t05-thin90.a2m.gz # 1qy1A.t05-thin90.a2m with 443 sequences, total weight= 443 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00072 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qy1A/info/1qy1A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qy1A/nostruct-align/1qy1A.t05-thin90.a2m.gz, have 34959 columns in 136 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2igd/nostruct-align/2igd.t05-thin90.a2m.gz # 2igd.t05-thin90.a2m with 14 sequences, total weight= 3.33906 avg weight= 0.238504 13 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2igd/info/2igd.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2i/2igd/nostruct-align/2igd.t05-thin90.a2m.gz, have 35020 columns in 137 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lc0A/nostruct-align/1lc0A.t05-thin90.a2m.gz # 1lc0A.t05-thin90.a2m with 2811 sequences, total weight= 2811 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.859316 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lc0A/info/1lc0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lc0A/nostruct-align/1lc0A.t05-thin90.a2m.gz, have 35310 columns in 138 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v30A/nostruct-align/1v30A.t05-thin90.a2m.gz # 1v30A.t05-thin90.a2m with 129 sequences, total weight= 129 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26606 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v30A/info/1v30A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v30A/nostruct-align/1v30A.t05-thin90.a2m.gz, have 35428 columns in 139 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dfuP/nostruct-align/1dfuP.t05-thin90.a2m.gz # 1dfuP.t05-thin90.a2m with 181 sequences, total weight= 30.4384 avg weight= 0.168168 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dfuP/info/1dfuP.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dfuP/nostruct-align/1dfuP.t05-thin90.a2m.gz, have 35522 columns in 140 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1po5A/nostruct-align/1po5A.t05-thin90.a2m.gz # 1po5A.t05-thin90.a2m with 4528 sequences, total weight= 4528 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01901 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1po5A/info/1po5A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1po5A/nostruct-align/1po5A.t05-thin90.a2m.gz, have 35987 columns in 141 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1md6A/nostruct-align/1md6A.t05-thin90.a2m.gz # 1md6A.t05-thin90.a2m with 118 sequences, total weight= 41.2745 avg weight= 0.349784 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1md6A/info/1md6A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1md6A/nostruct-align/1md6A.t05-thin90.a2m.gz, have 36141 columns in 142 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qwrA/nostruct-align/1qwrA.t05-thin90.a2m.gz # 1qwrA.t05-thin90.a2m with 192 sequences, total weight= 81.9918 avg weight= 0.427041 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30129 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qwrA/info/1qwrA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qwrA/nostruct-align/1qwrA.t05-thin90.a2m.gz, have 36456 columns in 143 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uwkA/nostruct-align/1uwkA.t05-thin90.a2m.gz # 1uwkA.t05-thin90.a2m with 103 sequences, total weight= 6.79497 avg weight= 0.0659705 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uwkA/info/1uwkA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uwkA/nostruct-align/1uwkA.t05-thin90.a2m.gz, have 37010 columns in 144 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1upqA/nostruct-align/1upqA.t05-thin90.a2m.gz # 1upqA.t05-thin90.a2m with 1859 sequences, total weight= 1859 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.965112 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1upqA/info/1upqA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1upqA/nostruct-align/1upqA.t05-thin90.a2m.gz, have 37117 columns in 145 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pwgA/nostruct-align/1pwgA.t05-thin90.a2m.gz # 1pwgA.t05-thin90.a2m with 864 sequences, total weight= 864 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.984341 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pwgA/info/1pwgA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pwgA/nostruct-align/1pwgA.t05-thin90.a2m.gz, have 37462 columns in 146 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jx6A/nostruct-align/1jx6A.t05-thin90.a2m.gz # 1jx6A.t05-thin90.a2m with 2234 sequences, total weight= 2234 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.924266 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jx6A/info/1jx6A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jx6A/nostruct-align/1jx6A.t05-thin90.a2m.gz, have 37800 columns in 147 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tqgA/nostruct-align/1tqgA.t05-thin90.a2m.gz # 1tqgA.t05-thin90.a2m with 317 sequences, total weight= 283.643 avg weight= 0.894773 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30143 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tqgA/info/1tqgA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tqgA/nostruct-align/1tqgA.t05-thin90.a2m.gz, have 37905 columns in 148 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f5vA/nostruct-align/1f5vA.t05-thin90.a2m.gz # 1f5vA.t05-thin90.a2m with 868 sequences, total weight= 868 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12416 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f5vA/info/1f5vA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f5vA/nostruct-align/1f5vA.t05-thin90.a2m.gz, have 38145 columns in 149 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fcqA/nostruct-align/1fcqA.t05-thin90.a2m.gz # 1fcqA.t05-thin90.a2m with 80 sequences, total weight= 14.8911 avg weight= 0.186139 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fcqA/info/1fcqA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fcqA/nostruct-align/1fcqA.t05-thin90.a2m.gz, have 38459 columns in 150 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pbyB/nostruct-align/1pbyB.t05-thin90.a2m.gz # 1pbyB.t05-thin90.a2m with 5933 sequences, total weight= 5933 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.817324 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pbyB/info/1pbyB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pbyB/nostruct-align/1pbyB.t05-thin90.a2m.gz, have 38796 columns in 151 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b3aA/nostruct-align/1b3aA.t05-thin90.a2m.gz # 1b3aA.t05-thin90.a2m with 317 sequences, total weight= 83.1471 avg weight= 0.262294 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30371 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b3aA/info/1b3aA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1b3aA/nostruct-align/1b3aA.t05-thin90.a2m.gz, have 38863 columns in 152 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dqzA/nostruct-align/1dqzA.t05-thin90.a2m.gz # 1dqzA.t05-thin90.a2m with 9364 sequences, total weight= 9364 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.686443 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dqzA/info/1dqzA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dqzA/nostruct-align/1dqzA.t05-thin90.a2m.gz, have 39143 columns in 153 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rkuA/nostruct-align/1rkuA.t05-thin90.a2m.gz # 1rkuA.t05-thin90.a2m with 5246 sequences, total weight= 5246 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.98433 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rkuA/info/1rkuA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rkuA/nostruct-align/1rkuA.t05-thin90.a2m.gz, have 39349 columns in 154 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hfeS/nostruct-align/1hfeS.t05-thin90.a2m.gz # 1hfeS.t05-thin90.a2m with 43 sequences, total weight= 16.713 avg weight= 0.388674 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hfeS/info/1hfeS.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hfeS/nostruct-align/1hfeS.t05-thin90.a2m.gz, have 39437 columns in 155 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nnhA/nostruct-align/1nnhA.t05-thin90.a2m.gz # 1nnhA.t05-thin90.a2m with 1269 sequences, total weight= 1269 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19228 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nnhA/info/1nnhA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nnhA/nostruct-align/1nnhA.t05-thin90.a2m.gz, have 39730 columns in 156 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vkiA/nostruct-align/1vkiA.t05-thin90.a2m.gz # 1vkiA.t05-thin90.a2m with 379 sequences, total weight= 379 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21973 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vkiA/info/1vkiA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vkiA/nostruct-align/1vkiA.t05-thin90.a2m.gz, have 39895 columns in 157 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o66A/nostruct-align/1o66A.t05-thin90.a2m.gz # 1o66A.t05-thin90.a2m with 216 sequences, total weight= 10.8988 avg weight= 0.0504575 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o66A/info/1o66A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o66A/nostruct-align/1o66A.t05-thin90.a2m.gz, have 40144 columns in 158 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xfkA/nostruct-align/1xfkA.t05-thin90.a2m.gz # 1xfkA.t05-thin90.a2m with 414 sequences, total weight= 414 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22986 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xfkA/info/1xfkA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xfkA/nostruct-align/1xfkA.t05-thin90.a2m.gz, have 40468 columns in 159 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ybiA/nostruct-align/1ybiA.t05-thin90.a2m.gz # 1ybiA.t05-thin90.a2m with 223 sequences, total weight= 223 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05585 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ybiA/info/1ybiA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1ybiA/nostruct-align/1ybiA.t05-thin90.a2m.gz, have 40752 columns in 160 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vicA/nostruct-align/1vicA.t05-thin90.a2m.gz # 1vicA.t05-thin90.a2m with 2630 sequences, total weight= 2630 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00114 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vicA/info/1vicA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vicA/nostruct-align/1vicA.t05-thin90.a2m.gz, have 41007 columns in 161 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j6oA/nostruct-align/1j6oA.t05-thin90.a2m.gz # 1j6oA.t05-thin90.a2m with 702 sequences, total weight= 702 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09994 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j6oA/info/1j6oA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j6oA/nostruct-align/1j6oA.t05-thin90.a2m.gz, have 41267 columns in 162 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tukA/nostruct-align/1tukA.t05-thin90.a2m.gz # 1tukA.t05-thin90.a2m with 68 sequences, total weight= 14.4287 avg weight= 0.212187 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tukA/info/1tukA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tukA/nostruct-align/1tukA.t05-thin90.a2m.gz, have 41334 columns in 163 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h4aX/nostruct-align/1h4aX.t05-thin90.a2m.gz # 1h4aX.t05-thin90.a2m with 277 sequences, total weight= 47.314 avg weight= 0.170809 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h4aX/info/1h4aX.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h4aX/nostruct-align/1h4aX.t05-thin90.a2m.gz, have 41507 columns in 164 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xteA/nostruct-align/1xteA.t05-thin90.a2m.gz # 1xteA.t05-thin90.a2m with 568 sequences, total weight= 568 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11582 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xteA/info/1xteA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xteA/nostruct-align/1xteA.t05-thin90.a2m.gz, have 41623 columns in 165 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i1wA/nostruct-align/1i1wA.t05-thin90.a2m.gz # 1i1wA.t05-thin90.a2m with 365 sequences, total weight= 365 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09205 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i1wA/info/1i1wA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i1wA/nostruct-align/1i1wA.t05-thin90.a2m.gz, have 41926 columns in 166 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1ten/nostruct-align/1ten.t05-thin90.a2m.gz # 1ten.t05-thin90.a2m with 4161 sequences, total weight= 4161 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09268 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1ten/info/1ten.stride-mixed.o_notor2 WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1t/1ten/nostruct-align/1ten.t05-thin90.a2m.gz, have 42015 columns in 167 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cb0A/nostruct-align/1cb0A.t05-thin90.a2m.gz # 1cb0A.t05-thin90.a2m with 696 sequences, total weight= 696 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08304 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cb0A/info/1cb0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cb0A/nostruct-align/1cb0A.t05-thin90.a2m.gz, have 42283 columns in 168 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oalA/nostruct-align/1oalA.t05-thin90.a2m.gz # 1oalA.t05-thin90.a2m with 392 sequences, total weight= 43.9324 avg weight= 0.112072 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oalA/info/1oalA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oalA/nostruct-align/1oalA.t05-thin90.a2m.gz, have 42434 columns in 169 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1deuA/nostruct-align/1deuA.t05-thin90.a2m.gz # 1deuA.t05-thin90.a2m with 1356 sequences, total weight= 1356 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24569 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1deuA/info/1deuA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1deuA/nostruct-align/1deuA.t05-thin90.a2m.gz, have 42709 columns in 170 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ygtA/nostruct-align/1ygtA.t05-thin90.a2m.gz # 1ygtA.t05-thin90.a2m with 117 sequences, total weight= 61.6094 avg weight= 0.526576 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30039 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ygtA/info/1ygtA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1ygtA/nostruct-align/1ygtA.t05-thin90.a2m.gz, have 42813 columns in 171 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oh0A/nostruct-align/1oh0A.t05-thin90.a2m.gz # 1oh0A.t05-thin90.a2m with 751 sequences, total weight= 751 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.833503 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oh0A/info/1oh0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oh0A/nostruct-align/1oh0A.t05-thin90.a2m.gz, have 42938 columns in 172 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1byi/nostruct-align/1byi.t05-thin90.a2m.gz # 1byi.t05-thin90.a2m with 2798 sequences, total weight= 2798 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.93649 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1byi/info/1byi.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1byi/nostruct-align/1byi.t05-thin90.a2m.gz, have 43162 columns in 173 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wkqA/nostruct-align/1wkqA.t05-thin90.a2m.gz # 1wkqA.t05-thin90.a2m with 972 sequences, total weight= 972 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15708 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wkqA/info/1wkqA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wkqA/nostruct-align/1wkqA.t05-thin90.a2m.gz, have 43320 columns in 174 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eexG/nostruct-align/1eexG.t05-thin90.a2m.gz # 1eexG.t05-thin90.a2m with 13 sequences, total weight= 3.87324 avg weight= 0.297942 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eexG/info/1eexG.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1eexG/nostruct-align/1eexG.t05-thin90.a2m.gz, have 43457 columns in 175 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m0kA/nostruct-align/1m0kA.t05-thin90.a2m.gz # 1m0kA.t05-thin90.a2m with 111 sequences, total weight= 49.1822 avg weight= 0.443083 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m0kA/info/1m0kA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m0kA/nostruct-align/1m0kA.t05-thin90.a2m.gz, have 43679 columns in 176 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t0tV/nostruct-align/1t0tV.t05-thin90.a2m.gz # 1t0tV.t05-thin90.a2m with 61 sequences, total weight= 32.8442 avg weight= 0.53843 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t0tV/info/1t0tV.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t0tV/nostruct-align/1t0tV.t05-thin90.a2m.gz, have 43922 columns in 177 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m6pA/nostruct-align/1m6pA.t05-thin90.a2m.gz # 1m6pA.t05-thin90.a2m with 326 sequences, total weight= 326 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27672 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m6pA/info/1m6pA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m6pA/nostruct-align/1m6pA.t05-thin90.a2m.gz, have 44068 columns in 178 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e6uA/nostruct-align/1e6uA.t05-thin90.a2m.gz # 1e6uA.t05-thin90.a2m with 9722 sequences, total weight= 9722 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.908371 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e6uA/info/1e6uA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e6uA/nostruct-align/1e6uA.t05-thin90.a2m.gz, have 44383 columns in 179 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q5yA/nostruct-align/1q5yA.t05-thin90.a2m.gz # 1q5yA.t05-thin90.a2m with 52 sequences, total weight= 12.5191 avg weight= 0.240751 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q5yA/info/1q5yA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q5yA/nostruct-align/1q5yA.t05-thin90.a2m.gz, have 44467 columns in 180 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r0rI/nostruct-align/1r0rI.t05-thin90.a2m.gz # 1r0rI.t05-thin90.a2m with 174 sequences, total weight= 24.6345 avg weight= 0.141578 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r0rI/info/1r0rI.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r0rI/nostruct-align/1r0rI.t05-thin90.a2m.gz, have 44518 columns in 181 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w2yA/nostruct-align/1w2yA.t05-thin90.a2m.gz # 1w2yA.t05-thin90.a2m with 47 sequences, total weight= 45.3759 avg weight= 0.965444 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w2yA/info/1w2yA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w2yA/nostruct-align/1w2yA.t05-thin90.a2m.gz, have 44744 columns in 182 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e7wA/nostruct-align/1e7wA.t05-thin90.a2m.gz # 1e7wA.t05-thin90.a2m with 8538 sequences, total weight= 8538 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18305 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e7wA/info/1e7wA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e7wA/nostruct-align/1e7wA.t05-thin90.a2m.gz, have 45011 columns in 183 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lopA/nostruct-align/1lopA.t05-thin90.a2m.gz # 1lopA.t05-thin90.a2m with 1116 sequences, total weight= 88.0597 avg weight= 0.0789065 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30407 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lopA/info/1lopA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lopA/nostruct-align/1lopA.t05-thin90.a2m.gz, have 45175 columns in 184 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1ty9A/nostruct-align/1ty9A.t05-thin90.a2m.gz # 1ty9A.t05-thin90.a2m with 322 sequences, total weight= 322 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20721 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1ty9A/info/1ty9A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1ty9A/nostruct-align/1ty9A.t05-thin90.a2m.gz, have 45377 columns in 185 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t61A/nostruct-align/1t61A.t05-thin90.a2m.gz # 1t61A.t05-thin90.a2m with 67 sequences, total weight= 5.33407 avg weight= 0.079613 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t61A/info/1t61A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t61A/nostruct-align/1t61A.t05-thin90.a2m.gz, have 45600 columns in 186 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fj2A/nostruct-align/1fj2A.t05-thin90.a2m.gz # 1fj2A.t05-thin90.a2m with 10370 sequences, total weight= 10370 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.779566 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fj2A/info/1fj2A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fj2A/nostruct-align/1fj2A.t05-thin90.a2m.gz, have 45829 columns in 187 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a8d/nostruct-align/1a8d.t05-thin90.a2m.gz # 1a8d.t05-thin90.a2m with 35 sequences, total weight= 25.5333 avg weight= 0.729524 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a8d/info/1a8d.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1a8d/nostruct-align/1a8d.t05-thin90.a2m.gz, have 46281 columns in 188 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sxrA/nostruct-align/1sxrA.t05-thin90.a2m.gz # 1sxrA.t05-thin90.a2m with 341 sequences, total weight= 341 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21975 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sxrA/info/1sxrA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sxrA/nostruct-align/1sxrA.t05-thin90.a2m.gz, have 46454 columns in 189 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kgdA/nostruct-align/1kgdA.t05-thin90.a2m.gz # 1kgdA.t05-thin90.a2m with 607 sequences, total weight= 607 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19711 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kgdA/info/1kgdA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kgdA/nostruct-align/1kgdA.t05-thin90.a2m.gz, have 46629 columns in 190 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1px5A/nostruct-align/1px5A.t05-thin90.a2m.gz # 1px5A.t05-thin90.a2m with 93 sequences, total weight= 26.4036 avg weight= 0.28391 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1px5A/info/1px5A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1px5A/nostruct-align/1px5A.t05-thin90.a2m.gz, have 46958 columns in 191 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1npk/nostruct-align/1npk.t05-thin90.a2m.gz # 1npk.t05-thin90.a2m with 470 sequences, total weight= 65.6962 avg weight= 0.139779 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3007 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1npk/info/1npk.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1npk/nostruct-align/1npk.t05-thin90.a2m.gz, have 47108 columns in 192 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sbyA/nostruct-align/1sbyA.t05-thin90.a2m.gz # 1sbyA.t05-thin90.a2m with 9563 sequences, total weight= 9563 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11254 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sbyA/info/1sbyA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sbyA/nostruct-align/1sbyA.t05-thin90.a2m.gz, have 47362 columns in 193 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i1jA/nostruct-align/1i1jA.t05-thin90.a2m.gz # 1i1jA.t05-thin90.a2m with 27 sequences, total weight= 8.765 avg weight= 0.32463 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i1jA/info/1i1jA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i1jA/nostruct-align/1i1jA.t05-thin90.a2m.gz, have 47468 columns in 194 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t1vA/nostruct-align/1t1vA.t05-thin90.a2m.gz # 1t1vA.t05-thin90.a2m with 590 sequences, total weight= 220.215 avg weight= 0.373245 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30887 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t1vA/info/1t1vA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t1vA/nostruct-align/1t1vA.t05-thin90.a2m.gz, have 47561 columns in 195 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j0pA/nostruct-align/1j0pA.t05-thin90.a2m.gz # 1j0pA.t05-thin90.a2m with 113 sequences, total weight= 113 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11738 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j0pA/info/1j0pA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j0pA/nostruct-align/1j0pA.t05-thin90.a2m.gz, have 47669 columns in 196 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1llfA/nostruct-align/1llfA.t05-thin90.a2m.gz # 1llfA.t05-thin90.a2m with 1869 sequences, total weight= 1869 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03812 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1llfA/info/1llfA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1llfA/nostruct-align/1llfA.t05-thin90.a2m.gz, have 48203 columns in 197 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t2wA/nostruct-align/1t2wA.t05-thin90.a2m.gz # 1t2wA.t05-thin90.a2m with 192 sequences, total weight= 192 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29564 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t2wA/info/1t2wA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t2wA/nostruct-align/1t2wA.t05-thin90.a2m.gz, have 48348 columns in 198 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yrcA/nostruct-align/1yrcA.t05-thin90.a2m.gz # 1yrcA.t05-thin90.a2m with 4492 sequences, total weight= 4492 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01244 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yrcA/info/1yrcA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1yrcA/nostruct-align/1yrcA.t05-thin90.a2m.gz, have 48753 columns in 199 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lniA/nostruct-align/1lniA.t05-thin90.a2m.gz # 1lniA.t05-thin90.a2m with 43 sequences, total weight= 11.3557 avg weight= 0.264086 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lniA/info/1lniA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lniA/nostruct-align/1lniA.t05-thin90.a2m.gz, have 48849 columns in 200 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p5dX/nostruct-align/1p5dX.t05-thin90.a2m.gz # 1p5dX.t05-thin90.a2m with 939 sequences, total weight= 939 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27831 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p5dX/info/1p5dX.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p5dX/nostruct-align/1p5dX.t05-thin90.a2m.gz, have 49304 columns in 201 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eu3A/nostruct-align/1eu3A.t05-thin90.a2m.gz # 1eu3A.t05-thin90.a2m with 101 sequences, total weight= 49.2401 avg weight= 0.487526 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eu3A/info/1eu3A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1eu3A/nostruct-align/1eu3A.t05-thin90.a2m.gz, have 49514 columns in 202 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kpf/nostruct-align/1kpf.t05-thin90.a2m.gz # 1kpf.t05-thin90.a2m with 655 sequences, total weight= 655 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27232 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kpf/info/1kpf.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kpf/nostruct-align/1kpf.t05-thin90.a2m.gz, have 49625 columns in 203 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m1fA/nostruct-align/1m1fA.t05-thin90.a2m.gz # 1m1fA.t05-thin90.a2m with 180 sequences, total weight= 164.486 avg weight= 0.913812 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30057 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m1fA/info/1m1fA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m1fA/nostruct-align/1m1fA.t05-thin90.a2m.gz, have 49732 columns in 204 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qhoA/nostruct-align/1qhoA.t05-thin90.a2m.gz # 1qhoA.t05-thin90.a2m with 1810 sequences, total weight= 1810 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28369 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qhoA/info/1qhoA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qhoA/nostruct-align/1qhoA.t05-thin90.a2m.gz, have 50418 columns in 205 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yacA/nostruct-align/1yacA.t05-thin90.a2m.gz # 1yacA.t05-thin90.a2m with 733 sequences, total weight= 733 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11743 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yacA/info/1yacA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1yacA/nostruct-align/1yacA.t05-thin90.a2m.gz, have 50622 columns in 206 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p3cA/nostruct-align/1p3cA.t05-thin90.a2m.gz # 1p3cA.t05-thin90.a2m with 3426 sequences, total weight= 3426 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18379 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p3cA/info/1p3cA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p3cA/nostruct-align/1p3cA.t05-thin90.a2m.gz, have 50837 columns in 207 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o7qA/nostruct-align/1o7qA.t05-thin90.a2m.gz # 1o7qA.t05-thin90.a2m with 67 sequences, total weight= 11.5316 avg weight= 0.172113 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o7qA/info/1o7qA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o7qA/nostruct-align/1o7qA.t05-thin90.a2m.gz, have 51124 columns in 208 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mgqA/nostruct-align/1mgqA.t05-thin90.a2m.gz # 1mgqA.t05-thin90.a2m with 386 sequences, total weight= 76.054 avg weight= 0.197031 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30118 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mgqA/info/1mgqA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mgqA/nostruct-align/1mgqA.t05-thin90.a2m.gz, have 51198 columns in 209 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w3iA/nostruct-align/1w3iA.t05-thin90.a2m.gz # 1w3iA.t05-thin90.a2m with 652 sequences, total weight= 652 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26539 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w3iA/info/1w3iA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w3iA/nostruct-align/1w3iA.t05-thin90.a2m.gz, have 51491 columns in 210 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uxzA/nostruct-align/1uxzA.t05-thin90.a2m.gz # 1uxzA.t05-thin90.a2m with 164 sequences, total weight= 129.445 avg weight= 0.789302 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30058 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uxzA/info/1uxzA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uxzA/nostruct-align/1uxzA.t05-thin90.a2m.gz, have 51622 columns in 211 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ra0A/nostruct-align/1ra0A.t05-thin90.a2m.gz # 1ra0A.t05-thin90.a2m with 2181 sequences, total weight= 2181 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.882235 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ra0A/info/1ra0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1ra0A/nostruct-align/1ra0A.t05-thin90.a2m.gz, have 52045 columns in 212 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wm3A/nostruct-align/1wm3A.t05-thin90.a2m.gz # 1wm3A.t05-thin90.a2m with 77 sequences, total weight= 25.5192 avg weight= 0.331418 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wm3A/info/1wm3A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wm3A/nostruct-align/1wm3A.t05-thin90.a2m.gz, have 52117 columns in 213 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r12A/nostruct-align/1r12A.t05-thin90.a2m.gz # 1r12A.t05-thin90.a2m with 25 sequences, total weight= 14.038 avg weight= 0.561519 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r12A/info/1r12A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r12A/nostruct-align/1r12A.t05-thin90.a2m.gz, have 52368 columns in 214 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1egwA/nostruct-align/1egwA.t05-thin90.a2m.gz # 1egwA.t05-thin90.a2m with 560 sequences, total weight= 15.8331 avg weight= 0.0282733 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1egwA/info/1egwA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1egwA/nostruct-align/1egwA.t05-thin90.a2m.gz, have 52439 columns in 215 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jmkC/nostruct-align/1jmkC.t05-thin90.a2m.gz # 1jmkC.t05-thin90.a2m with 8122 sequences, total weight= 8122 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.739265 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jmkC/info/1jmkC.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jmkC/nostruct-align/1jmkC.t05-thin90.a2m.gz, have 52661 columns in 216 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1duvG/nostruct-align/1duvG.t05-thin90.a2m.gz # 1duvG.t05-thin90.a2m with 596 sequences, total weight= 46.592 avg weight= 0.0781744 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1duvG/info/1duvG.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1duvG/nostruct-align/1duvG.t05-thin90.a2m.gz, have 52994 columns in 217 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rocA/nostruct-align/1rocA.t05-thin90.a2m.gz # 1rocA.t05-thin90.a2m with 53 sequences, total weight= 10.7047 avg weight= 0.201976 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rocA/info/1rocA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rocA/nostruct-align/1rocA.t05-thin90.a2m.gz, have 53149 columns in 218 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v70A/nostruct-align/1v70A.t05-thin90.a2m.gz # 1v70A.t05-thin90.a2m with 1584 sequences, total weight= 1584 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.916077 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v70A/info/1v70A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v70A/nostruct-align/1v70A.t05-thin90.a2m.gz, have 53254 columns in 219 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i71A/nostruct-align/1i71A.t05-thin90.a2m.gz # 1i71A.t05-thin90.a2m with 355 sequences, total weight= 23.9739 avg weight= 0.0675321 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30033 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i71A/info/1i71A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i71A/nostruct-align/1i71A.t05-thin90.a2m.gz, have 53337 columns in 220 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dqgA/nostruct-align/1dqgA.t05-thin90.a2m.gz # 1dqgA.t05-thin90.a2m with 46 sequences, total weight= 28.4697 avg weight= 0.618907 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dqgA/info/1dqgA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dqgA/nostruct-align/1dqgA.t05-thin90.a2m.gz, have 53471 columns in 221 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pq7A/nostruct-align/1pq7A.t05-thin90.a2m.gz # 1pq7A.t05-thin90.a2m with 2977 sequences, total weight= 1609.68 avg weight= 0.540707 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31821 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pq7A/info/1pq7A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pq7A/nostruct-align/1pq7A.t05-thin90.a2m.gz, have 53695 columns in 222 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l1lA/nostruct-align/1l1lA.t05-thin90.a2m.gz # 1l1lA.t05-thin90.a2m with 488 sequences, total weight= 488 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26517 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l1lA/info/1l1lA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1l1lA/nostruct-align/1l1lA.t05-thin90.a2m.gz, have 54412 columns in 223 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e2wA/nostruct-align/1e2wA.t05-thin90.a2m.gz # 1e2wA.t05-thin90.a2m with 51 sequences, total weight= 4.44266 avg weight= 0.087111 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e2wA/info/1e2wA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e2wA/nostruct-align/1e2wA.t05-thin90.a2m.gz, have 54663 columns in 224 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lam/nostruct-align/1lam.t05-thin90.a2m.gz # 1lam.t05-thin90.a2m with 386 sequences, total weight= 60.1293 avg weight= 0.155775 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30201 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lam/info/1lam.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lam/nostruct-align/1lam.t05-thin90.a2m.gz, have 55147 columns in 225 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xx1A/nostruct-align/1xx1A.t05-thin90.a2m.gz # 1xx1A.t05-thin90.a2m with 407 sequences, total weight= 407 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13757 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xx1A/info/1xx1A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xx1A/nostruct-align/1xx1A.t05-thin90.a2m.gz, have 55432 columns in 226 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1ltzA/nostruct-align/1ltzA.t05-thin90.a2m.gz # 1ltzA.t05-thin90.a2m with 124 sequences, total weight= 20.2939 avg weight= 0.163661 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1ltzA/info/1ltzA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1ltzA/nostruct-align/1ltzA.t05-thin90.a2m.gz, have 55706 columns in 227 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nar/nostruct-align/1nar.t05-thin90.a2m.gz # 1nar.t05-thin90.a2m with 934 sequences, total weight= 934 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07921 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nar/info/1nar.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nar/nostruct-align/1nar.t05-thin90.a2m.gz, have 55995 columns in 228 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xppA/nostruct-align/1xppA.t05-thin90.a2m.gz # 1xppA.t05-thin90.a2m with 5 sequences, total weight= 3.96946 avg weight= 0.793891 12 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xppA/info/1xppA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xppA/nostruct-align/1xppA.t05-thin90.a2m.gz, have 56094 columns in 229 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kyfA/nostruct-align/1kyfA.t05-thin90.a2m.gz # 1kyfA.t05-thin90.a2m with 62 sequences, total weight= 62 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10968 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kyfA/info/1kyfA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kyfA/nostruct-align/1kyfA.t05-thin90.a2m.gz, have 56341 columns in 230 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i40A/nostruct-align/1i40A.t05-thin90.a2m.gz # 1i40A.t05-thin90.a2m with 283 sequences, total weight= 32.4944 avg weight= 0.114821 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i40A/info/1i40A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i40A/nostruct-align/1i40A.t05-thin90.a2m.gz, have 56516 columns in 231 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1io0A/nostruct-align/1io0A.t05-thin90.a2m.gz # 1io0A.t05-thin90.a2m with 391 sequences, total weight= 391 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20522 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1io0A/info/1io0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1io0A/nostruct-align/1io0A.t05-thin90.a2m.gz, have 56682 columns in 232 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/8a/8abp/nostruct-align/8abp.t05-thin90.a2m.gz # 8abp.t05-thin90.a2m with 1953 sequences, total weight= 1953 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.948813 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/8a/8abp/info/8abp.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/8a/8abp/nostruct-align/8abp.t05-thin90.a2m.gz, have 56987 columns in 233 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cjwA/nostruct-align/1cjwA.t05-thin90.a2m.gz # 1cjwA.t05-thin90.a2m with 5965 sequences, total weight= 5965 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.73196 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cjwA/info/1cjwA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cjwA/nostruct-align/1cjwA.t05-thin90.a2m.gz, have 57153 columns in 234 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bopA/nostruct-align/2bopA.t05-thin90.a2m.gz # 2bopA.t05-thin90.a2m with 112 sequences, total weight= 15.5971 avg weight= 0.13926 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bopA/info/2bopA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2b/2bopA/nostruct-align/2bopA.t05-thin90.a2m.gz, have 57238 columns in 235 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xzzA/nostruct-align/1xzzA.t05-thin90.a2m.gz # 1xzzA.t05-thin90.a2m with 78 sequences, total weight= 19.4792 avg weight= 0.249733 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xzzA/info/1xzzA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xzzA/nostruct-align/1xzzA.t05-thin90.a2m.gz, have 57454 columns in 236 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qmgA/nostruct-align/1qmgA.t05-thin90.a2m.gz # 1qmgA.t05-thin90.a2m with 1562 sequences, total weight= 1562 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19016 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qmgA/info/1qmgA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qmgA/nostruct-align/1qmgA.t05-thin90.a2m.gz, have 57968 columns in 237 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jovA/nostruct-align/1jovA.t05-thin90.a2m.gz # 1jovA.t05-thin90.a2m with 445 sequences, total weight= 445 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12079 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jovA/info/1jovA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jovA/nostruct-align/1jovA.t05-thin90.a2m.gz, have 58237 columns in 238 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1ws8A/nostruct-align/1ws8A.t05-thin90.a2m.gz # 1ws8A.t05-thin90.a2m with 137 sequences, total weight= 23.0098 avg weight= 0.167955 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1ws8A/info/1ws8A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1ws8A/nostruct-align/1ws8A.t05-thin90.a2m.gz, have 58341 columns in 239 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vmgA/nostruct-align/1vmgA.t05-thin90.a2m.gz # 1vmgA.t05-thin90.a2m with 118 sequences, total weight= 44.0189 avg weight= 0.373042 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vmgA/info/1vmgA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vmgA/nostruct-align/1vmgA.t05-thin90.a2m.gz, have 58424 columns in 240 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hqkA/nostruct-align/1hqkA.t05-thin90.a2m.gz # 1hqkA.t05-thin90.a2m with 256 sequences, total weight= 25.3907 avg weight= 0.0991824 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hqkA/info/1hqkA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hqkA/nostruct-align/1hqkA.t05-thin90.a2m.gz, have 58578 columns in 241 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e85A/nostruct-align/1e85A.t05-thin90.a2m.gz # 1e85A.t05-thin90.a2m with 73 sequences, total weight= 73 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2749 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e85A/info/1e85A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e85A/nostruct-align/1e85A.t05-thin90.a2m.gz, have 58703 columns in 242 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e6bA/nostruct-align/1e6bA.t05-thin90.a2m.gz # 1e6bA.t05-thin90.a2m with 2637 sequences, total weight= 2637 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02286 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e6bA/info/1e6bA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e6bA/nostruct-align/1e6bA.t05-thin90.a2m.gz, have 58897 columns in 243 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t05-thin90.a2m.gz # 1nzyA.t05-thin90.a2m with 2105 sequences, total weight= 2105 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16656 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t05-thin90.a2m.gz, have 59166 columns in 244 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n93X/nostruct-align/1n93X.t05-thin90.a2m.gz # 1n93X.t05-thin90.a2m with 14 sequences, total weight= 7.03119 avg weight= 0.502228 15 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n93X/info/1n93X.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n93X/nostruct-align/1n93X.t05-thin90.a2m.gz, have 59501 columns in 245 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qq5A/nostruct-align/1qq5A.t05-thin90.a2m.gz # 1qq5A.t05-thin90.a2m with 3915 sequences, total weight= 3915 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.795187 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qq5A/info/1qq5A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qq5A/nostruct-align/1qq5A.t05-thin90.a2m.gz, have 59746 columns in 246 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1si6X/nostruct-align/1si6X.t05-thin90.a2m.gz # 1si6X.t05-thin90.a2m with 1225 sequences, total weight= 1225 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.912807 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1si6X/info/1si6X.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1si6X/nostruct-align/1si6X.t05-thin90.a2m.gz, have 60026 columns in 247 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r5rA/nostruct-align/1r5rA.t05-thin90.a2m.gz # 1r5rA.t05-thin90.a2m with 263 sequences, total weight= 263 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.955237 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r5rA/info/1r5rA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r5rA/nostruct-align/1r5rA.t05-thin90.a2m.gz, have 60143 columns in 248 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ow1A/nostruct-align/1ow1A.t05-thin90.a2m.gz # 1ow1A.t05-thin90.a2m with 29 sequences, total weight= 11.8998 avg weight= 0.410336 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ow1A/info/1ow1A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ow1A/nostruct-align/1ow1A.t05-thin90.a2m.gz, have 60310 columns in 249 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iirA/nostruct-align/1iirA.t05-thin90.a2m.gz # 1iirA.t05-thin90.a2m with 3022 sequences, total weight= 3022 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.829997 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iirA/info/1iirA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iirA/nostruct-align/1iirA.t05-thin90.a2m.gz, have 60692 columns in 250 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vggA/nostruct-align/1vggA.t05-thin90.a2m.gz # 1vggA.t05-thin90.a2m with 31 sequences, total weight= 3.90364 avg weight= 0.125924 20 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vggA/info/1vggA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vggA/nostruct-align/1vggA.t05-thin90.a2m.gz, have 60853 columns in 251 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oc7A/nostruct-align/1oc7A.t05-thin90.a2m.gz # 1oc7A.t05-thin90.a2m with 80 sequences, total weight= 22.8142 avg weight= 0.285177 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oc7A/info/1oc7A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oc7A/nostruct-align/1oc7A.t05-thin90.a2m.gz, have 61217 columns in 252 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wkrA/nostruct-align/1wkrA.t05-thin90.a2m.gz # 1wkrA.t05-thin90.a2m with 951 sequences, total weight= 951 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20594 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wkrA/info/1wkrA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wkrA/nostruct-align/1wkrA.t05-thin90.a2m.gz, have 61557 columns in 253 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v4vA/nostruct-align/1v4vA.t05-thin90.a2m.gz # 1v4vA.t05-thin90.a2m with 5826 sequences, total weight= 5826 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.729748 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v4vA/info/1v4vA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v4vA/nostruct-align/1v4vA.t05-thin90.a2m.gz, have 61930 columns in 254 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wy2A/nostruct-align/1wy2A.t05-thin90.a2m.gz # 1wy2A.t05-thin90.a2m with 1372 sequences, total weight= 1372 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11425 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wy2A/info/1wy2A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wy2A/nostruct-align/1wy2A.t05-thin90.a2m.gz, have 62281 columns in 255 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tt8A/nostruct-align/1tt8A.t05-thin90.a2m.gz # 1tt8A.t05-thin90.a2m with 94 sequences, total weight= 94 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19184 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tt8A/info/1tt8A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tt8A/nostruct-align/1tt8A.t05-thin90.a2m.gz, have 62445 columns in 256 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qsgA/nostruct-align/1qsgA.t05-thin90.a2m.gz # 1qsgA.t05-thin90.a2m with 8761 sequences, total weight= 8761 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16282 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qsgA/info/1qsgA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qsgA/nostruct-align/1qsgA.t05-thin90.a2m.gz, have 62703 columns in 257 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1aquA/nostruct-align/1aquA.t05-thin90.a2m.gz # 1aquA.t05-thin90.a2m with 775 sequences, total weight= 775 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.946707 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1aquA/info/1aquA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1aquA/nostruct-align/1aquA.t05-thin90.a2m.gz, have 62984 columns in 258 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1llnA/nostruct-align/1llnA.t05-thin90.a2m.gz # 1llnA.t05-thin90.a2m with 139 sequences, total weight= 139 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20695 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1llnA/info/1llnA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1llnA/nostruct-align/1llnA.t05-thin90.a2m.gz, have 63246 columns in 259 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hdoA/nostruct-align/1hdoA.t05-thin90.a2m.gz # 1hdoA.t05-thin90.a2m with 12956 sequences, total weight= 12956 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.970473 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hdoA/info/1hdoA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hdoA/nostruct-align/1hdoA.t05-thin90.a2m.gz, have 63451 columns in 260 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c1dA/nostruct-align/1c1dA.t05-thin90.a2m.gz # 1c1dA.t05-thin90.a2m with 752 sequences, total weight= 752 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29783 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c1dA/info/1c1dA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1c1dA/nostruct-align/1c1dA.t05-thin90.a2m.gz, have 63800 columns in 261 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vk5A/nostruct-align/1vk5A.t05-thin90.a2m.gz # 1vk5A.t05-thin90.a2m with 3 sequences, total weight= 2.38912 avg weight= 0.796373 8 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vk5A/info/1vk5A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vk5A/nostruct-align/1vk5A.t05-thin90.a2m.gz, have 63921 columns in 262 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ie9A/nostruct-align/1ie9A.t05-thin90.a2m.gz # 1ie9A.t05-thin90.a2m with 1182 sequences, total weight= 1182 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.907863 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ie9A/info/1ie9A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ie9A/nostruct-align/1ie9A.t05-thin90.a2m.gz, have 64176 columns in 263 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1ay7B/nostruct-align/1ay7B.t05-thin90.a2m.gz # 1ay7B.t05-thin90.a2m with 43 sequences, total weight= 39.9159 avg weight= 0.928276 41 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1ay7B/info/1ay7B.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1ay7B/nostruct-align/1ay7B.t05-thin90.a2m.gz, have 64265 columns in 264 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cruA/nostruct-align/1cruA.t05-thin90.a2m.gz # 1cruA.t05-thin90.a2m with 1090 sequences, total weight= 1090 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.897955 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cruA/info/1cruA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cruA/nostruct-align/1cruA.t05-thin90.a2m.gz, have 64713 columns in 265 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1moq/nostruct-align/1moq.t05-thin90.a2m.gz # 1moq.t05-thin90.a2m with 1203 sequences, total weight= 1203 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1136 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1moq/info/1moq.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1moq/nostruct-align/1moq.t05-thin90.a2m.gz, have 65079 columns in 266 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iomA/nostruct-align/1iomA.t05-thin90.a2m.gz # 1iomA.t05-thin90.a2m with 493 sequences, total weight= 93.8655 avg weight= 0.190396 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30305 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iomA/info/1iomA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iomA/nostruct-align/1iomA.t05-thin90.a2m.gz, have 65453 columns in 267 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q92A/nostruct-align/1q92A.t05-thin90.a2m.gz # 1q92A.t05-thin90.a2m with 2203 sequences, total weight= 2203 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.916747 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q92A/info/1q92A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q92A/nostruct-align/1q92A.t05-thin90.a2m.gz, have 65648 columns in 268 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xm3A/nostruct-align/1xm3A.t05-thin90.a2m.gz # 1xm3A.t05-thin90.a2m with 607 sequences, total weight= 607 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15274 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xm3A/info/1xm3A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xm3A/nostruct-align/1xm3A.t05-thin90.a2m.gz, have 65892 columns in 269 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1ja9A/nostruct-align/1ja9A.t05-thin90.a2m.gz # 1ja9A.t05-thin90.a2m with 9198 sequences, total weight= 9198 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14105 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1ja9A/info/1ja9A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1ja9A/nostruct-align/1ja9A.t05-thin90.a2m.gz, have 66151 columns in 270 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x9dA/nostruct-align/1x9dA.t05-thin90.a2m.gz # 1x9dA.t05-thin90.a2m with 206 sequences, total weight= 35.4604 avg weight= 0.172138 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x9dA/info/1x9dA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1x9dA/nostruct-align/1x9dA.t05-thin90.a2m.gz, have 66602 columns in 271 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v2bA/nostruct-align/1v2bA.t05-thin90.a2m.gz # 1v2bA.t05-thin90.a2m with 58 sequences, total weight= 35.5385 avg weight= 0.612733 43 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v2bA/info/1v2bA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v2bA/nostruct-align/1v2bA.t05-thin90.a2m.gz, have 66750 columns in 272 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gp6A/nostruct-align/1gp6A.t05-thin90.a2m.gz # 1gp6A.t05-thin90.a2m with 804 sequences, total weight= 804 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2267 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gp6A/info/1gp6A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gp6A/nostruct-align/1gp6A.t05-thin90.a2m.gz, have 67099 columns in 273 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gtvA/nostruct-align/1gtvA.t05-thin90.a2m.gz # 1gtvA.t05-thin90.a2m with 4847 sequences, total weight= 4847 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.828761 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gtvA/info/1gtvA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gtvA/nostruct-align/1gtvA.t05-thin90.a2m.gz, have 67307 columns in 274 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bqcA/nostruct-align/1bqcA.t05-thin90.a2m.gz # 1bqcA.t05-thin90.a2m with 2218 sequences, total weight= 2218 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.815547 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bqcA/info/1bqcA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bqcA/nostruct-align/1bqcA.t05-thin90.a2m.gz, have 67609 columns in 275 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nwzA/nostruct-align/1nwzA.t05-thin90.a2m.gz # 1nwzA.t05-thin90.a2m with 9 sequences, total weight= 4.61856 avg weight= 0.513173 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nwzA/info/1nwzA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nwzA/nostruct-align/1nwzA.t05-thin90.a2m.gz, have 67734 columns in 276 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wmqA/nostruct-align/1wmqA.t05-thin90.a2m.gz # 1wmqA.t05-thin90.a2m with 7 sequences, total weight= 4.32627 avg weight= 0.618038 15 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wmqA/info/1wmqA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wmqA/nostruct-align/1wmqA.t05-thin90.a2m.gz, have 67877 columns in 277 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pinA/nostruct-align/1pinA.t05-thin90.a2m.gz # 1pinA.t05-thin90.a2m with 592 sequences, total weight= 592 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17235 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pinA/info/1pinA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pinA/nostruct-align/1pinA.t05-thin90.a2m.gz, have 68030 columns in 278 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jlvA/nostruct-align/1jlvA.t05-thin90.a2m.gz # 1jlvA.t05-thin90.a2m with 2592 sequences, total weight= 2592 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02433 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jlvA/info/1jlvA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jlvA/nostruct-align/1jlvA.t05-thin90.a2m.gz, have 68237 columns in 279 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kcqA/nostruct-align/1kcqA.t05-thin90.a2m.gz # 1kcqA.t05-thin90.a2m with 692 sequences, total weight= 692 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09757 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kcqA/info/1kcqA.stride-mixed.o_notor2 WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1k/1kcqA/nostruct-align/1kcqA.t05-thin90.a2m.gz, have 68340 columns in 280 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qh5A/nostruct-align/1qh5A.t05-thin90.a2m.gz # 1qh5A.t05-thin90.a2m with 3069 sequences, total weight= 3069 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.876056 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qh5A/info/1qh5A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qh5A/nostruct-align/1qh5A.t05-thin90.a2m.gz, have 68600 columns in 281 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v0wA/nostruct-align/1v0wA.t05-thin90.a2m.gz # 1v0wA.t05-thin90.a2m with 931 sequences, total weight= 931 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.886618 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v0wA/info/1v0wA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v0wA/nostruct-align/1v0wA.t05-thin90.a2m.gz, have 69096 columns in 282 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2ilk/nostruct-align/2ilk.t05-thin90.a2m.gz # 2ilk.t05-thin90.a2m with 80 sequences, total weight= 40.9599 avg weight= 0.511999 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2ilk/info/2ilk.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2i/2ilk/nostruct-align/2ilk.t05-thin90.a2m.gz, have 69251 columns in 283 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h2eA/nostruct-align/1h2eA.t05-thin90.a2m.gz # 1h2eA.t05-thin90.a2m with 1368 sequences, total weight= 1368 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05532 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h2eA/info/1h2eA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h2eA/nostruct-align/1h2eA.t05-thin90.a2m.gz, have 69458 columns in 284 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r5yA/nostruct-align/1r5yA.t05-thin90.a2m.gz # 1r5yA.t05-thin90.a2m with 312 sequences, total weight= 81.9942 avg weight= 0.262802 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30091 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r5yA/info/1r5yA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r5yA/nostruct-align/1r5yA.t05-thin90.a2m.gz, have 69819 columns in 285 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n13B/nostruct-align/1n13B.t05-thin90.a2m.gz # 1n13B.t05-thin90.a2m with 24 sequences, total weight= 13.415 avg weight= 0.558959 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n13B/info/1n13B.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n13B/nostruct-align/1n13B.t05-thin90.a2m.gz, have 69931 columns in 286 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qusA/nostruct-align/1qusA.t05-thin90.a2m.gz # 1qusA.t05-thin90.a2m with 217 sequences, total weight= 145.948 avg weight= 0.67257 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30125 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qusA/info/1qusA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qusA/nostruct-align/1qusA.t05-thin90.a2m.gz, have 70243 columns in 287 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mc2A/nostruct-align/1mc2A.t05-thin90.a2m.gz # 1mc2A.t05-thin90.a2m with 308 sequences, total weight= 25.0934 avg weight= 0.0814721 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mc2A/info/1mc2A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mc2A/nostruct-align/1mc2A.t05-thin90.a2m.gz, have 70365 columns in 288 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vsrA/nostruct-align/1vsrA.t05-thin90.a2m.gz # 1vsrA.t05-thin90.a2m with 44 sequences, total weight= 13.4641 avg weight= 0.306003 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vsrA/info/1vsrA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vsrA/nostruct-align/1vsrA.t05-thin90.a2m.gz, have 70499 columns in 289 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ooeA/nostruct-align/1ooeA.t05-thin90.a2m.gz # 1ooeA.t05-thin90.a2m with 9037 sequences, total weight= 9037 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13793 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ooeA/info/1ooeA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ooeA/nostruct-align/1ooeA.t05-thin90.a2m.gz, have 70734 columns in 290 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1flmA/nostruct-align/1flmA.t05-thin90.a2m.gz # 1flmA.t05-thin90.a2m with 47 sequences, total weight= 38.7011 avg weight= 0.823429 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1flmA/info/1flmA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1flmA/nostruct-align/1flmA.t05-thin90.a2m.gz, have 70856 columns in 291 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xg5A/nostruct-align/1xg5A.t05-thin90.a2m.gz # 1xg5A.t05-thin90.a2m with 9354 sequences, total weight= 9354 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14478 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xg5A/info/1xg5A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xg5A/nostruct-align/1xg5A.t05-thin90.a2m.gz, have 71110 columns in 292 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gci/nostruct-align/1gci.t05-thin90.a2m.gz # 1gci.t05-thin90.a2m with 1358 sequences, total weight= 1358 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22194 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gci/info/1gci.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gci/nostruct-align/1gci.t05-thin90.a2m.gz, have 71379 columns in 293 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vm0A/nostruct-align/1vm0A.t05-thin90.a2m.gz # 1vm0A.t05-thin90.a2m with 35 sequences, total weight= 14.4911 avg weight= 0.414031 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vm0A/info/1vm0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vm0A/nostruct-align/1vm0A.t05-thin90.a2m.gz, have 71472 columns in 294 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1usgA/nostruct-align/1usgA.t05-thin90.a2m.gz # 1usgA.t05-thin90.a2m with 1894 sequences, total weight= 1894 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.849354 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1usgA/info/1usgA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1usgA/nostruct-align/1usgA.t05-thin90.a2m.gz, have 71817 columns in 295 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1unqA/nostruct-align/1unqA.t05-thin90.a2m.gz # 1unqA.t05-thin90.a2m with 1706 sequences, total weight= 1706 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.902305 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1unqA/info/1unqA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1unqA/nostruct-align/1unqA.t05-thin90.a2m.gz, have 71934 columns in 296 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m1nA/nostruct-align/1m1nA.t05-thin90.a2m.gz # 1m1nA.t05-thin90.a2m with 531 sequences, total weight= 531 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22723 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m1nA/info/1m1nA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m1nA/nostruct-align/1m1nA.t05-thin90.a2m.gz, have 72411 columns in 297 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1se8A/nostruct-align/1se8A.t05-thin90.a2m.gz # 1se8A.t05-thin90.a2m with 334 sequences, total weight= 87.6645 avg weight= 0.262468 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1se8A/info/1se8A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1se8A/nostruct-align/1se8A.t05-thin90.a2m.gz, have 72624 columns in 298 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pot/nostruct-align/1pot.t05-thin90.a2m.gz # 1pot.t05-thin90.a2m with 2004 sequences, total weight= 2004 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.86163 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pot/info/1pot.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pot/nostruct-align/1pot.t05-thin90.a2m.gz, have 72946 columns in 299 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w6sB/nostruct-align/1w6sB.t05-thin90.a2m.gz # 1w6sB.t05-thin90.a2m with 9 sequences, total weight= 3.03141 avg weight= 0.336823 14 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w6sB/info/1w6sB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w6sB/nostruct-align/1w6sB.t05-thin90.a2m.gz, have 73018 columns in 300 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wlgA/nostruct-align/1wlgA.t05-thin90.a2m.gz # 1wlgA.t05-thin90.a2m with 349 sequences, total weight= 147.431 avg weight= 0.422438 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3033 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wlgA/info/1wlgA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wlgA/nostruct-align/1wlgA.t05-thin90.a2m.gz, have 73311 columns in 301 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r6jA/nostruct-align/1r6jA.t05-thin90.a2m.gz # 1r6jA.t05-thin90.a2m with 667 sequences, total weight= 116.094 avg weight= 0.174054 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31367 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r6jA/info/1r6jA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r6jA/nostruct-align/1r6jA.t05-thin90.a2m.gz, have 73393 columns in 302 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iqcA/nostruct-align/1iqcA.t05-thin90.a2m.gz # 1iqcA.t05-thin90.a2m with 373 sequences, total weight= 373 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08826 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iqcA/info/1iqcA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iqcA/nostruct-align/1iqcA.t05-thin90.a2m.gz, have 73701 columns in 303 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p9aG/nostruct-align/1p9aG.t05-thin90.a2m.gz # 1p9aG.t05-thin90.a2m with 6912 sequences, total weight= 6912 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.93966 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p9aG/info/1p9aG.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p9aG/nostruct-align/1p9aG.t05-thin90.a2m.gz, have 73967 columns in 304 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1z57A/nostruct-align/1z57A.t05-thin90.a2m.gz # 1z57A.t05-thin90.a2m with 12821 sequences, total weight= 12821 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.995503 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1z57A/info/1z57A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1z/1z57A/nostruct-align/1z57A.t05-thin90.a2m.gz, have 74300 columns in 305 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yg9A/nostruct-align/1yg9A.t05-thin90.a2m.gz # 1yg9A.t05-thin90.a2m with 974 sequences, total weight= 974 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21617 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yg9A/info/1yg9A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1yg9A/nostruct-align/1yg9A.t05-thin90.a2m.gz, have 74630 columns in 306 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oewA/nostruct-align/1oewA.t05-thin90.a2m.gz # 1oewA.t05-thin90.a2m with 964 sequences, total weight= 964 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24716 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oewA/info/1oewA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oewA/nostruct-align/1oewA.t05-thin90.a2m.gz, have 74958 columns in 307 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hz4A/nostruct-align/1hz4A.t05-thin90.a2m.gz # 1hz4A.t05-thin90.a2m with 11 sequences, total weight= 3.9945 avg weight= 0.363136 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hz4A/info/1hz4A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hz4A/nostruct-align/1hz4A.t05-thin90.a2m.gz, have 75324 columns in 308 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wer/nostruct-align/1wer.t05-thin90.a2m.gz # 1wer.t05-thin90.a2m with 266 sequences, total weight= 266 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03194 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wer/info/1wer.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wer/nostruct-align/1wer.t05-thin90.a2m.gz, have 75648 columns in 309 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1ne9A/nostruct-align/1ne9A.t05-thin90.a2m.gz # 1ne9A.t05-thin90.a2m with 400 sequences, total weight= 400 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.902759 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1ne9A/info/1ne9A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1ne9A/nostruct-align/1ne9A.t05-thin90.a2m.gz, have 75983 columns in 310 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qe3A/nostruct-align/1qe3A.t05-thin90.a2m.gz # 1qe3A.t05-thin90.a2m with 1886 sequences, total weight= 1886 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06585 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qe3A/info/1qe3A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qe3A/nostruct-align/1qe3A.t05-thin90.a2m.gz, have 76450 columns in 311 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qnaA/nostruct-align/1qnaA.t05-thin90.a2m.gz # 1qnaA.t05-thin90.a2m with 121 sequences, total weight= 27.5341 avg weight= 0.227555 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qnaA/info/1qnaA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qnaA/nostruct-align/1qnaA.t05-thin90.a2m.gz, have 76632 columns in 312 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wouA/nostruct-align/1wouA.t05-thin90.a2m.gz # 1wouA.t05-thin90.a2m with 2040 sequences, total weight= 2040 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17771 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wouA/info/1wouA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wouA/nostruct-align/1wouA.t05-thin90.a2m.gz, have 76751 columns in 313 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rp0A/nostruct-align/1rp0A.t05-thin90.a2m.gz # 1rp0A.t05-thin90.a2m with 8822 sequences, total weight= 8822 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.829964 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rp0A/info/1rp0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rp0A/nostruct-align/1rp0A.t05-thin90.a2m.gz, have 77029 columns in 314 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3p/3proC/nostruct-align/3proC.t05-thin90.a2m.gz # 3proC.t05-thin90.a2m with 23 sequences, total weight= 14.3458 avg weight= 0.623732 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3p/3proC/info/3proC.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/3p/3proC/nostruct-align/3proC.t05-thin90.a2m.gz, have 77179 columns in 315 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ukfA/nostruct-align/1ukfA.t05-thin90.a2m.gz # 1ukfA.t05-thin90.a2m with 21 sequences, total weight= 21 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15148 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ukfA/info/1ukfA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ukfA/nostruct-align/1ukfA.t05-thin90.a2m.gz, have 77367 columns in 316 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v7rA/nostruct-align/1v7rA.t05-thin90.a2m.gz # 1v7rA.t05-thin90.a2m with 296 sequences, total weight= 29.2132 avg weight= 0.0986931 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v7rA/info/1v7rA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v7rA/nostruct-align/1v7rA.t05-thin90.a2m.gz, have 77553 columns in 317 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nz0A/nostruct-align/1nz0A.t05-thin90.a2m.gz # 1nz0A.t05-thin90.a2m with 221 sequences, total weight= 126.943 avg weight= 0.574402 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30206 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nz0A/info/1nz0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nz0A/nostruct-align/1nz0A.t05-thin90.a2m.gz, have 77662 columns in 318 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p4oA/nostruct-align/1p4oA.t05-thin90.a2m.gz # 1p4oA.t05-thin90.a2m with 13455 sequences, total weight= 13455 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p4oA/info/1p4oA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p4oA/nostruct-align/1p4oA.t05-thin90.a2m.gz, have 77970 columns in 319 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1ajsA/nostruct-align/1ajsA.t05-thin90.a2m.gz # 1ajsA.t05-thin90.a2m with 4311 sequences, total weight= 4311 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.907136 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1ajsA/info/1ajsA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1ajsA/nostruct-align/1ajsA.t05-thin90.a2m.gz, have 78382 columns in 320 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c3cA/nostruct-align/1c3cA.t05-thin90.a2m.gz # 1c3cA.t05-thin90.a2m with 948 sequences, total weight= 439.733 avg weight= 0.463853 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31436 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c3cA/info/1c3cA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1c3cA/nostruct-align/1c3cA.t05-thin90.a2m.gz, have 78806 columns in 321 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mzbA/nostruct-align/1mzbA.t05-thin90.a2m.gz # 1mzbA.t05-thin90.a2m with 486 sequences, total weight= 428.592 avg weight= 0.881877 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30233 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mzbA/info/1mzbA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mzbA/nostruct-align/1mzbA.t05-thin90.a2m.gz, have 78939 columns in 322 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wvgA/nostruct-align/1wvgA.t05-thin90.a2m.gz # 1wvgA.t05-thin90.a2m with 11378 sequences, total weight= 11378 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.868061 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wvgA/info/1wvgA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wvgA/nostruct-align/1wvgA.t05-thin90.a2m.gz, have 79291 columns in 323 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xq6A/nostruct-align/1xq6A.t05-thin90.a2m.gz # 1xq6A.t05-thin90.a2m with 12624 sequences, total weight= 12624 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.906214 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xq6A/info/1xq6A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xq6A/nostruct-align/1xq6A.t05-thin90.a2m.gz, have 79544 columns in 324 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b6a/nostruct-align/1b6a.t05-thin90.a2m.gz # 1b6a.t05-thin90.a2m with 1245 sequences, total weight= 152.347 avg weight= 0.122367 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30271 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b6a/info/1b6a.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1b6a/nostruct-align/1b6a.t05-thin90.a2m.gz, have 79899 columns in 325 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x8gA/nostruct-align/1x8gA.t05-thin90.a2m.gz # 1x8gA.t05-thin90.a2m with 3246 sequences, total weight= 3246 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.827569 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x8gA/info/1x8gA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1x8gA/nostruct-align/1x8gA.t05-thin90.a2m.gz, have 80123 columns in 326 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c1kA/nostruct-align/1c1kA.t05-thin90.a2m.gz # 1c1kA.t05-thin90.a2m with 12 sequences, total weight= 6.3248 avg weight= 0.527067 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c1kA/info/1c1kA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1c1kA/nostruct-align/1c1kA.t05-thin90.a2m.gz, have 80340 columns in 327 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3v/3vub/nostruct-align/3vub.t05-thin90.a2m.gz # 3vub.t05-thin90.a2m with 18 sequences, total weight= 10.2047 avg weight= 0.566929 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3v/3vub/info/3vub.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/3v/3vub/nostruct-align/3vub.t05-thin90.a2m.gz, have 80441 columns in 328 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2baa/nostruct-align/2baa.t05-thin90.a2m.gz # 2baa.t05-thin90.a2m with 282 sequences, total weight= 51.3228 avg weight= 0.181996 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2baa/info/2baa.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2b/2baa/nostruct-align/2baa.t05-thin90.a2m.gz, have 80684 columns in 329 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xsqA/nostruct-align/1xsqA.t05-thin90.a2m.gz # 1xsqA.t05-thin90.a2m with 70 sequences, total weight= 30.2075 avg weight= 0.431536 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xsqA/info/1xsqA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xsqA/nostruct-align/1xsqA.t05-thin90.a2m.gz, have 80838 columns in 330 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oruA/nostruct-align/1oruA.t05-thin90.a2m.gz # 1oruA.t05-thin90.a2m with 144 sequences, total weight= 129.297 avg weight= 0.897893 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oruA/info/1oruA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oruA/nostruct-align/1oruA.t05-thin90.a2m.gz, have 81020 columns in 331 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cqxA/nostruct-align/1cqxA.t05-thin90.a2m.gz # 1cqxA.t05-thin90.a2m with 1913 sequences, total weight= 1913 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04117 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cqxA/info/1cqxA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cqxA/nostruct-align/1cqxA.t05-thin90.a2m.gz, have 81423 columns in 332 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1txlA/nostruct-align/1txlA.t05-thin90.a2m.gz # 1txlA.t05-thin90.a2m with 30 sequences, total weight= 9.7677 avg weight= 0.32559 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1txlA/info/1txlA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1txlA/nostruct-align/1txlA.t05-thin90.a2m.gz, have 81611 columns in 333 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ud9A/nostruct-align/1ud9A.t05-thin90.a2m.gz # 1ud9A.t05-thin90.a2m with 220 sequences, total weight= 220 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11006 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ud9A/info/1ud9A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ud9A/nostruct-align/1ud9A.t05-thin90.a2m.gz, have 81853 columns in 334 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t82A/nostruct-align/1t82A.t05-thin90.a2m.gz # 1t82A.t05-thin90.a2m with 455 sequences, total weight= 455 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07168 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t82A/info/1t82A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t82A/nostruct-align/1t82A.t05-thin90.a2m.gz, have 81996 columns in 335 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m1qA/nostruct-align/1m1qA.t05-thin90.a2m.gz # 1m1qA.t05-thin90.a2m with 47 sequences, total weight= 47 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23935 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m1qA/info/1m1qA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m1qA/nostruct-align/1m1qA.t05-thin90.a2m.gz, have 82086 columns in 336 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nnxA/nostruct-align/1nnxA.t05-thin90.a2m.gz # 1nnxA.t05-thin90.a2m with 42 sequences, total weight= 17.598 avg weight= 0.418999 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nnxA/info/1nnxA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nnxA/nostruct-align/1nnxA.t05-thin90.a2m.gz, have 82179 columns in 337 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fm0D/nostruct-align/1fm0D.t05-thin90.a2m.gz # 1fm0D.t05-thin90.a2m with 230 sequences, total weight= 57.6835 avg weight= 0.250798 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30149 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fm0D/info/1fm0D.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fm0D/nostruct-align/1fm0D.t05-thin90.a2m.gz, have 82260 columns in 338 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v7wA/nostruct-align/1v7wA.t05-thin90.a2m.gz # 1v7wA.t05-thin90.a2m with 1050 sequences, total weight= 1050 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.788231 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v7wA/info/1v7wA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v7wA/nostruct-align/1v7wA.t05-thin90.a2m.gz, have 83039 columns in 339 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hd2A/nostruct-align/1hd2A.t05-thin90.a2m.gz # 1hd2A.t05-thin90.a2m with 1530 sequences, total weight= 1530 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24071 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hd2A/info/1hd2A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hd2A/nostruct-align/1hd2A.t05-thin90.a2m.gz, have 83200 columns in 340 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pa1A/nostruct-align/1pa1A.t05-thin90.a2m.gz # 1pa1A.t05-thin90.a2m with 1073 sequences, total weight= 1073 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17612 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pa1A/info/1pa1A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pa1A/nostruct-align/1pa1A.t05-thin90.a2m.gz, have 83502 columns in 341 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1euwA/nostruct-align/1euwA.t05-thin90.a2m.gz # 1euwA.t05-thin90.a2m with 560 sequences, total weight= 560 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28161 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1euwA/info/1euwA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1euwA/nostruct-align/1euwA.t05-thin90.a2m.gz, have 83638 columns in 342 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1ah7/nostruct-align/1ah7.t05-thin90.a2m.gz # 1ah7.t05-thin90.a2m with 114 sequences, total weight= 114 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08645 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1ah7/info/1ah7.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1ah7/nostruct-align/1ah7.t05-thin90.a2m.gz, have 83883 columns in 343 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f6bA/nostruct-align/1f6bA.t05-thin90.a2m.gz # 1f6bA.t05-thin90.a2m with 5963 sequences, total weight= 5963 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.988548 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f6bA/info/1f6bA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f6bA/nostruct-align/1f6bA.t05-thin90.a2m.gz, have 84059 columns in 344 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vqsA/nostruct-align/1vqsA.t05-thin90.a2m.gz # 1vqsA.t05-thin90.a2m with 123 sequences, total weight= 123 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24491 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vqsA/info/1vqsA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vqsA/nostruct-align/1vqsA.t05-thin90.a2m.gz, have 84169 columns in 345 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qksA/nostruct-align/1qksA.t05-thin90.a2m.gz # 1qksA.t05-thin90.a2m with 325 sequences, total weight= 217.295 avg weight= 0.6686 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30032 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qksA/info/1qksA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qksA/nostruct-align/1qksA.t05-thin90.a2m.gz, have 84728 columns in 346 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h6fA/nostruct-align/1h6fA.t05-thin90.a2m.gz # 1h6fA.t05-thin90.a2m with 241 sequences, total weight= 37.771 avg weight= 0.156726 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h6fA/info/1h6fA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h6fA/nostruct-align/1h6fA.t05-thin90.a2m.gz, have 84912 columns in 347 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q7lA/nostruct-align/1q7lA.t05-thin90.a2m.gz # 1q7lA.t05-thin90.a2m with 1319 sequences, total weight= 1319 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11822 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q7lA/info/1q7lA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q7lA/nostruct-align/1q7lA.t05-thin90.a2m.gz, have 85104 columns in 348 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1te2A/nostruct-align/1te2A.t05-thin90.a2m.gz # 1te2A.t05-thin90.a2m with 3559 sequences, total weight= 3559 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.874784 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1te2A/info/1te2A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1te2A/nostruct-align/1te2A.t05-thin90.a2m.gz, have 85322 columns in 349 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q0pA/nostruct-align/1q0pA.t05-thin90.a2m.gz # 1q0pA.t05-thin90.a2m with 1473 sequences, total weight= 1473 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.998155 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q0pA/info/1q0pA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q0pA/nostruct-align/1q0pA.t05-thin90.a2m.gz, have 85514 columns in 350 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xe0A/nostruct-align/1xe0A.t05-thin90.a2m.gz # 1xe0A.t05-thin90.a2m with 46 sequences, total weight= 10.4436 avg weight= 0.227035 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xe0A/info/1xe0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xe0A/nostruct-align/1xe0A.t05-thin90.a2m.gz, have 85622 columns in 351 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vziA/nostruct-align/1vziA.t05-thin90.a2m.gz # 1vziA.t05-thin90.a2m with 40 sequences, total weight= 19.3765 avg weight= 0.484411 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vziA/info/1vziA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vziA/nostruct-align/1vziA.t05-thin90.a2m.gz, have 85747 columns in 352 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vybA/nostruct-align/1vybA.t05-thin90.a2m.gz # 1vybA.t05-thin90.a2m with 1618 sequences, total weight= 1618 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.857843 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vybA/info/1vybA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vybA/nostruct-align/1vybA.t05-thin90.a2m.gz, have 85983 columns in 353 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uptB/nostruct-align/1uptB.t05-thin90.a2m.gz # 1uptB.t05-thin90.a2m with 12 sequences, total weight= 5.31553 avg weight= 0.44296 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uptB/info/1uptB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uptB/nostruct-align/1uptB.t05-thin90.a2m.gz, have 86041 columns in 354 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o4vA/nostruct-align/1o4vA.t05-thin90.a2m.gz # 1o4vA.t05-thin90.a2m with 270 sequences, total weight= 16.6658 avg weight= 0.0617253 42 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o4vA/info/1o4vA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o4vA/nostruct-align/1o4vA.t05-thin90.a2m.gz, have 86210 columns in 355 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gq8A/nostruct-align/1gq8A.t05-thin90.a2m.gz # 1gq8A.t05-thin90.a2m with 330 sequences, total weight= 172.921 avg weight= 0.524004 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30265 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gq8A/info/1gq8A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gq8A/nostruct-align/1gq8A.t05-thin90.a2m.gz, have 86529 columns in 356 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pz4A/nostruct-align/1pz4A.t05-thin90.a2m.gz # 1pz4A.t05-thin90.a2m with 139 sequences, total weight= 100.669 avg weight= 0.724238 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3007 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pz4A/info/1pz4A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pz4A/nostruct-align/1pz4A.t05-thin90.a2m.gz, have 86642 columns in 357 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bjiA/nostruct-align/2bjiA.t05-thin90.a2m.gz # 2bjiA.t05-thin90.a2m with 922 sequences, total weight= 922 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1395 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bjiA/info/2bjiA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2b/2bjiA/nostruct-align/2bjiA.t05-thin90.a2m.gz, have 86916 columns in 358 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qmvA/nostruct-align/1qmvA.t05-thin90.a2m.gz # 1qmvA.t05-thin90.a2m with 1869 sequences, total weight= 1869 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19686 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qmvA/info/1qmvA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qmvA/nostruct-align/1qmvA.t05-thin90.a2m.gz, have 87113 columns in 359 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qgiA/nostruct-align/1qgiA.t05-thin90.a2m.gz # 1qgiA.t05-thin90.a2m with 22 sequences, total weight= 15.3445 avg weight= 0.697478 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qgiA/info/1qgiA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qgiA/nostruct-align/1qgiA.t05-thin90.a2m.gz, have 87372 columns in 360 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sfsA/nostruct-align/1sfsA.t05-thin90.a2m.gz # 1sfsA.t05-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.993228 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sfsA/info/1sfsA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sfsA/nostruct-align/1sfsA.t05-thin90.a2m.gz, have 87585 columns in 361 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ru4A/nostruct-align/1ru4A.t05-thin90.a2m.gz # 1ru4A.t05-thin90.a2m with 1178 sequences, total weight= 1178 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.96565 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ru4A/info/1ru4A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1ru4A/nostruct-align/1ru4A.t05-thin90.a2m.gz, have 87985 columns in 362 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m33A/nostruct-align/1m33A.t05-thin90.a2m.gz # 1m33A.t05-thin90.a2m with 7473 sequences, total weight= 7473 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.684912 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m33A/info/1m33A.stride-mixed.o_notor2 WARNING: skipping h, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1m/1m33A/nostruct-align/1m33A.t05-thin90.a2m.gz, have 88240 columns in 363 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t4hA/nostruct-align/1t4hA.t05-thin90.a2m.gz # 1t4hA.t05-thin90.a2m with 13489 sequences, total weight= 13489 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13344 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t4hA/info/1t4hA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t4hA/nostruct-align/1t4hA.t05-thin90.a2m.gz, have 88510 columns in 364 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1igqA/nostruct-align/1igqA.t05-thin90.a2m.gz # 1igqA.t05-thin90.a2m with 6 sequences, total weight= 2.45317 avg weight= 0.408862 10 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1igqA/info/1igqA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1igqA/nostruct-align/1igqA.t05-thin90.a2m.gz, have 88564 columns in 365 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mkkA/nostruct-align/1mkkA.t05-thin90.a2m.gz # 1mkkA.t05-thin90.a2m with 98 sequences, total weight= 26.4031 avg weight= 0.269419 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mkkA/info/1mkkA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mkkA/nostruct-align/1mkkA.t05-thin90.a2m.gz, have 88657 columns in 366 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pyfA/nostruct-align/1pyfA.t05-thin90.a2m.gz # 1pyfA.t05-thin90.a2m with 1979 sequences, total weight= 1848.91 avg weight= 0.934266 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30195 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pyfA/info/1pyfA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pyfA/nostruct-align/1pyfA.t05-thin90.a2m.gz, have 88968 columns in 367 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rxqA/nostruct-align/1rxqA.t05-thin90.a2m.gz # 1rxqA.t05-thin90.a2m with 197 sequences, total weight= 197 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.850961 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rxqA/info/1rxqA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rxqA/nostruct-align/1rxqA.t05-thin90.a2m.gz, have 89142 columns in 368 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1ql0A/nostruct-align/1ql0A.t05-thin90.a2m.gz # 1ql0A.t05-thin90.a2m with 211 sequences, total weight= 211 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12837 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1ql0A/info/1ql0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1ql0A/nostruct-align/1ql0A.t05-thin90.a2m.gz, have 89383 columns in 369 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qnrA/nostruct-align/1qnrA.t05-thin90.a2m.gz # 1qnrA.t05-thin90.a2m with 2313 sequences, total weight= 2313 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.807306 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qnrA/info/1qnrA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qnrA/nostruct-align/1qnrA.t05-thin90.a2m.gz, have 89727 columns in 370 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u07A/nostruct-align/1u07A.t05-thin90.a2m.gz # 1u07A.t05-thin90.a2m with 279 sequences, total weight= 230.617 avg weight= 0.826583 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30224 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u07A/info/1u07A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1u07A/nostruct-align/1u07A.t05-thin90.a2m.gz, have 89817 columns in 371 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sh8A/nostruct-align/1sh8A.t05-thin90.a2m.gz # 1sh8A.t05-thin90.a2m with 798 sequences, total weight= 798 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.987094 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sh8A/info/1sh8A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sh8A/nostruct-align/1sh8A.t05-thin90.a2m.gz, have 89970 columns in 372 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j71A/nostruct-align/1j71A.t05-thin90.a2m.gz # 1j71A.t05-thin90.a2m with 968 sequences, total weight= 968 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21867 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j71A/info/1j71A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j71A/nostruct-align/1j71A.t05-thin90.a2m.gz, have 90304 columns in 373 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tr0A/nostruct-align/1tr0A.t05-thin90.a2m.gz # 1tr0A.t05-thin90.a2m with 119 sequences, total weight= 119 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1643 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tr0A/info/1tr0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tr0A/nostruct-align/1tr0A.t05-thin90.a2m.gz, have 90410 columns in 374 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h32A/nostruct-align/1h32A.t05-thin90.a2m.gz # 1h32A.t05-thin90.a2m with 850 sequences, total weight= 850 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.948897 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h32A/info/1h32A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h32A/nostruct-align/1h32A.t05-thin90.a2m.gz, have 90671 columns in 375 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bg6/nostruct-align/1bg6.t05-thin90.a2m.gz # 1bg6.t05-thin90.a2m with 5222 sequences, total weight= 5222 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.548223 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bg6/info/1bg6.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bg6/nostruct-align/1bg6.t05-thin90.a2m.gz, have 91020 columns in 376 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1idpA/nostruct-align/1idpA.t05-thin90.a2m.gz # 1idpA.t05-thin90.a2m with 26 sequences, total weight= 16.6727 avg weight= 0.641258 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1idpA/info/1idpA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1idpA/nostruct-align/1idpA.t05-thin90.a2m.gz, have 91167 columns in 377 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u5xA/nostruct-align/1u5xA.t05-thin90.a2m.gz # 1u5xA.t05-thin90.a2m with 163 sequences, total weight= 163 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25357 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u5xA/info/1u5xA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1u5xA/nostruct-align/1u5xA.t05-thin90.a2m.gz, have 91297 columns in 378 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kmvA/nostruct-align/1kmvA.t05-thin90.a2m.gz # 1kmvA.t05-thin90.a2m with 493 sequences, total weight= 493 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19593 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kmvA/info/1kmvA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kmvA/nostruct-align/1kmvA.t05-thin90.a2m.gz, have 91482 columns in 379 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oi6A/nostruct-align/1oi6A.t05-thin90.a2m.gz # 1oi6A.t05-thin90.a2m with 344 sequences, total weight= 73.2514 avg weight= 0.21294 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3007 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oi6A/info/1oi6A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oi6A/nostruct-align/1oi6A.t05-thin90.a2m.gz, have 91684 columns in 380 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uq5A/nostruct-align/1uq5A.t05-thin90.a2m.gz # 1uq5A.t05-thin90.a2m with 142 sequences, total weight= 142 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23423 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uq5A/info/1uq5A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uq5A/nostruct-align/1uq5A.t05-thin90.a2m.gz, have 91947 columns in 381 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oxjA/nostruct-align/1oxjA.t05-thin90.a2m.gz # 1oxjA.t05-thin90.a2m with 27 sequences, total weight= 15.1982 avg weight= 0.562898 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oxjA/info/1oxjA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oxjA/nostruct-align/1oxjA.t05-thin90.a2m.gz, have 92117 columns in 382 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nxmA/nostruct-align/1nxmA.t05-thin90.a2m.gz # 1nxmA.t05-thin90.a2m with 341 sequences, total weight= 74.4614 avg weight= 0.218362 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30067 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nxmA/info/1nxmA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nxmA/nostruct-align/1nxmA.t05-thin90.a2m.gz, have 92311 columns in 383 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s9rA/nostruct-align/1s9rA.t05-thin90.a2m.gz # 1s9rA.t05-thin90.a2m with 330 sequences, total weight= 330 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20458 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s9rA/info/1s9rA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s9rA/nostruct-align/1s9rA.t05-thin90.a2m.gz, have 92720 columns in 384 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i52A/nostruct-align/1i52A.t05-thin90.a2m.gz # 1i52A.t05-thin90.a2m with 2654 sequences, total weight= 2654 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01781 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i52A/info/1i52A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i52A/nostruct-align/1i52A.t05-thin90.a2m.gz, have 92945 columns in 385 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p5vB/nostruct-align/1p5vB.t05-thin90.a2m.gz # 1p5vB.t05-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.614906 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p5vB/info/1p5vB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p5vB/nostruct-align/1p5vB.t05-thin90.a2m.gz, have 93081 columns in 386 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nq7A/nostruct-align/1nq7A.t05-thin90.a2m.gz # 1nq7A.t05-thin90.a2m with 1086 sequences, total weight= 1086 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.940005 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nq7A/info/1nq7A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nq7A/nostruct-align/1nq7A.t05-thin90.a2m.gz, have 93325 columns in 387 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1is3A/nostruct-align/1is3A.t05-thin90.a2m.gz # 1is3A.t05-thin90.a2m with 307 sequences, total weight= 302.776 avg weight= 0.986243 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1is3A/info/1is3A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1is3A/nostruct-align/1is3A.t05-thin90.a2m.gz, have 93459 columns in 388 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l3kA/nostruct-align/1l3kA.t05-thin90.a2m.gz # 1l3kA.t05-thin90.a2m with 4410 sequences, total weight= 4410 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05272 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l3kA/info/1l3kA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1l3kA/nostruct-align/1l3kA.t05-thin90.a2m.gz, have 93622 columns in 389 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nkr/nostruct-align/1nkr.t05-thin90.a2m.gz # 1nkr.t05-thin90.a2m with 4111 sequences, total weight= 4111 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.959408 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nkr/info/1nkr.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nkr/nostruct-align/1nkr.t05-thin90.a2m.gz, have 93817 columns in 390 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vh4A/nostruct-align/1vh4A.t05-thin90.a2m.gz # 1vh4A.t05-thin90.a2m with 333 sequences, total weight= 333 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26528 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vh4A/info/1vh4A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vh4A/nostruct-align/1vh4A.t05-thin90.a2m.gz, have 94227 columns in 391 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o97C/nostruct-align/1o97C.t05-thin90.a2m.gz # 1o97C.t05-thin90.a2m with 324 sequences, total weight= 90.8461 avg weight= 0.280389 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30206 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o97C/info/1o97C.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o97C/nostruct-align/1o97C.t05-thin90.a2m.gz, have 94478 columns in 392 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tyjA/nostruct-align/1tyjA.t05-thin90.a2m.gz # 1tyjA.t05-thin90.a2m with 26 sequences, total weight= 6.10492 avg weight= 0.234805 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tyjA/info/1tyjA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tyjA/nostruct-align/1tyjA.t05-thin90.a2m.gz, have 94648 columns in 393 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vd6A/nostruct-align/1vd6A.t05-thin90.a2m.gz # 1vd6A.t05-thin90.a2m with 651 sequences, total weight= 651 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11768 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vd6A/info/1vd6A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vd6A/nostruct-align/1vd6A.t05-thin90.a2m.gz, have 94866 columns in 394 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vpmA/nostruct-align/1vpmA.t05-thin90.a2m.gz # 1vpmA.t05-thin90.a2m with 668 sequences, total weight= 668 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08956 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vpmA/info/1vpmA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vpmA/nostruct-align/1vpmA.t05-thin90.a2m.gz, have 95021 columns in 395 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k77A/nostruct-align/1k77A.t05-thin90.a2m.gz # 1k77A.t05-thin90.a2m with 1022 sequences, total weight= 1022 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.90773 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k77A/info/1k77A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k77A/nostruct-align/1k77A.t05-thin90.a2m.gz, have 95281 columns in 396 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rzhM/nostruct-align/1rzhM.t05-thin90.a2m.gz # 1rzhM.t05-thin90.a2m with 233 sequences, total weight= 16.1165 avg weight= 0.0691696 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rzhM/info/1rzhM.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rzhM/nostruct-align/1rzhM.t05-thin90.a2m.gz, have 95582 columns in 397 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rwzA/nostruct-align/1rwzA.t05-thin90.a2m.gz # 1rwzA.t05-thin90.a2m with 189 sequences, total weight= 189 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17705 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rwzA/info/1rwzA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rwzA/nostruct-align/1rwzA.t05-thin90.a2m.gz, have 95826 columns in 398 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iu8A/nostruct-align/1iu8A.t05-thin90.a2m.gz # 1iu8A.t05-thin90.a2m with 132 sequences, total weight= 96.0797 avg weight= 0.727877 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30038 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iu8A/info/1iu8A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iu8A/nostruct-align/1iu8A.t05-thin90.a2m.gz, have 96032 columns in 399 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jh6A/nostruct-align/1jh6A.t05-thin90.a2m.gz # 1jh6A.t05-thin90.a2m with 214 sequences, total weight= 214 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04369 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jh6A/info/1jh6A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jh6A/nostruct-align/1jh6A.t05-thin90.a2m.gz, have 96213 columns in 400 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nykA/nostruct-align/1nykA.t05-thin90.a2m.gz # 1nykA.t05-thin90.a2m with 1223 sequences, total weight= 1223 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18349 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nykA/info/1nykA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nykA/nostruct-align/1nykA.t05-thin90.a2m.gz, have 96369 columns in 401 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w0nA/nostruct-align/1w0nA.t05-thin90.a2m.gz # 1w0nA.t05-thin90.a2m with 4 sequences, total weight= 2.89094 avg weight= 0.722735 10 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w0nA/info/1w0nA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w0nA/nostruct-align/1w0nA.t05-thin90.a2m.gz, have 96489 columns in 402 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u7lA/nostruct-align/1u7lA.t05-thin90.a2m.gz # 1u7lA.t05-thin90.a2m with 70 sequences, total weight= 29.645 avg weight= 0.423499 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u7lA/info/1u7lA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1u7lA/nostruct-align/1u7lA.t05-thin90.a2m.gz, have 96853 columns in 403 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xgkA/nostruct-align/1xgkA.t05-thin90.a2m.gz # 1xgkA.t05-thin90.a2m with 12626 sequences, total weight= 12626 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.963897 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xgkA/info/1xgkA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xgkA/nostruct-align/1xgkA.t05-thin90.a2m.gz, have 97178 columns in 404 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q8dA/nostruct-align/1q8dA.t05-thin90.a2m.gz # 1q8dA.t05-thin90.a2m with 30 sequences, total weight= 5.80036 avg weight= 0.193345 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q8dA/info/1q8dA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q8dA/nostruct-align/1q8dA.t05-thin90.a2m.gz, have 97278 columns in 405 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fsgA/nostruct-align/1fsgA.t05-thin90.a2m.gz # 1fsgA.t05-thin90.a2m with 2024 sequences, total weight= 2024 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.970398 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fsgA/info/1fsgA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fsgA/nostruct-align/1fsgA.t05-thin90.a2m.gz, have 97511 columns in 406 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1ts9A/nostruct-align/1ts9A.t05-thin90.a2m.gz # 1ts9A.t05-thin90.a2m with 62 sequences, total weight= 36.845 avg weight= 0.594275 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1ts9A/info/1ts9A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1ts9A/nostruct-align/1ts9A.t05-thin90.a2m.gz, have 97609 columns in 407 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kshB/nostruct-align/1kshB.t05-thin90.a2m.gz # 1kshB.t05-thin90.a2m with 44 sequences, total weight= 10.7372 avg weight= 0.244027 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kshB/info/1kshB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kshB/nostruct-align/1kshB.t05-thin90.a2m.gz, have 97751 columns in 408 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y7yA/nostruct-align/1y7yA.t05-thin90.a2m.gz # 1y7yA.t05-thin90.a2m with 1198 sequences, total weight= 496.856 avg weight= 0.414738 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32033 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y7yA/info/1y7yA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1y7yA/nostruct-align/1y7yA.t05-thin90.a2m.gz, have 97820 columns in 409 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a4iA/nostruct-align/1a4iA.t05-thin90.a2m.gz # 1a4iA.t05-thin90.a2m with 608 sequences, total weight= 84.172 avg weight= 0.138441 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30204 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a4iA/info/1a4iA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1a4iA/nostruct-align/1a4iA.t05-thin90.a2m.gz, have 98105 columns in 410 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jubA/nostruct-align/1jubA.t05-thin90.a2m.gz # 1jubA.t05-thin90.a2m with 2485 sequences, total weight= 2485 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.978076 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jubA/info/1jubA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jubA/nostruct-align/1jubA.t05-thin90.a2m.gz, have 98416 columns in 411 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oflA/nostruct-align/1oflA.t05-thin90.a2m.gz # 1oflA.t05-thin90.a2m with 551 sequences, total weight= 551 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18928 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oflA/info/1oflA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oflA/nostruct-align/1oflA.t05-thin90.a2m.gz, have 98897 columns in 412 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wcv1/nostruct-align/1wcv1.t05-thin90.a2m.gz # 1wcv1.t05-thin90.a2m with 2936 sequences, total weight= 2936 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.946918 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wcv1/info/1wcv1.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wcv1/nostruct-align/1wcv1.t05-thin90.a2m.gz, have 99140 columns in 413 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vhnA/nostruct-align/1vhnA.t05-thin90.a2m.gz # 1vhnA.t05-thin90.a2m with 1292 sequences, total weight= 1292 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05198 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vhnA/info/1vhnA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vhnA/nostruct-align/1vhnA.t05-thin90.a2m.gz, have 99445 columns in 414 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c5eA/nostruct-align/1c5eA.t05-thin90.a2m.gz # 1c5eA.t05-thin90.a2m with 6 sequences, total weight= 3.79778 avg weight= 0.632963 13 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c5eA/info/1c5eA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1c5eA/nostruct-align/1c5eA.t05-thin90.a2m.gz, have 99540 columns in 415 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rwjA/nostruct-align/1rwjA.t05-thin90.a2m.gz # 1rwjA.t05-thin90.a2m with 62 sequences, total weight= 21.1963 avg weight= 0.341876 41 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rwjA/info/1rwjA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rwjA/nostruct-align/1rwjA.t05-thin90.a2m.gz, have 99621 columns in 416 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p3dA/nostruct-align/1p3dA.t05-thin90.a2m.gz # 1p3dA.t05-thin90.a2m with 1528 sequences, total weight= 1528 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09779 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p3dA/info/1p3dA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p3dA/nostruct-align/1p3dA.t05-thin90.a2m.gz, have 100084 columns in 417 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x8qA/nostruct-align/1x8qA.t05-thin90.a2m.gz # 1x8qA.t05-thin90.a2m with 100 sequences, total weight= 100 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14069 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x8qA/info/1x8qA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1x8qA/nostruct-align/1x8qA.t05-thin90.a2m.gz, have 100268 columns in 418 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2s/2sak/nostruct-align/2sak.t05-thin90.a2m.gz # 2sak.t05-thin90.a2m with 6 sequences, total weight= 6 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29353 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2s/2sak/info/2sak.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2s/2sak/nostruct-align/2sak.t05-thin90.a2m.gz, have 100389 columns in 419 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d0qA/nostruct-align/1d0qA.t05-thin90.a2m.gz # 1d0qA.t05-thin90.a2m with 255 sequences, total weight= 38.6681 avg weight= 0.15164 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d0qA/info/1d0qA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d0qA/nostruct-align/1d0qA.t05-thin90.a2m.gz, have 100491 columns in 420 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xe7A/nostruct-align/1xe7A.t05-thin90.a2m.gz # 1xe7A.t05-thin90.a2m with 81 sequences, total weight= 27.696 avg weight= 0.341926 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xe7A/info/1xe7A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xe7A/nostruct-align/1xe7A.t05-thin90.a2m.gz, have 100677 columns in 421 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1npyA/nostruct-align/1npyA.t05-thin90.a2m.gz # 1npyA.t05-thin90.a2m with 602 sequences, total weight= 602 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23765 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1npyA/info/1npyA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1npyA/nostruct-align/1npyA.t05-thin90.a2m.gz, have 100946 columns in 422 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bl8A/nostruct-align/2bl8A.t05-thin90.a2m.gz # 2bl8A.t05-thin90.a2m with 9 sequences, total weight= 4.45568 avg weight= 0.495075 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bl8A/info/2bl8A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2b/2bl8A/nostruct-align/2bl8A.t05-thin90.a2m.gz, have 101039 columns in 423 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fs7A/nostruct-align/1fs7A.t05-thin90.a2m.gz # 1fs7A.t05-thin90.a2m with 602 sequences, total weight= 602 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.861098 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fs7A/info/1fs7A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fs7A/nostruct-align/1fs7A.t05-thin90.a2m.gz, have 101510 columns in 424 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eazA/nostruct-align/1eazA.t05-thin90.a2m.gz # 1eazA.t05-thin90.a2m with 1725 sequences, total weight= 1725 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.986422 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eazA/info/1eazA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1eazA/nostruct-align/1eazA.t05-thin90.a2m.gz, have 101613 columns in 425 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pg6A/nostruct-align/1pg6A.t05-thin90.a2m.gz # 1pg6A.t05-thin90.a2m with 153 sequences, total weight= 110.2 avg weight= 0.720264 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30083 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pg6A/info/1pg6A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pg6A/nostruct-align/1pg6A.t05-thin90.a2m.gz, have 101829 columns in 426 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uj8A/nostruct-align/1uj8A.t05-thin90.a2m.gz # 1uj8A.t05-thin90.a2m with 53 sequences, total weight= 8.39408 avg weight= 0.158379 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uj8A/info/1uj8A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uj8A/nostruct-align/1uj8A.t05-thin90.a2m.gz, have 101902 columns in 427 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1npsA/nostruct-align/1npsA.t05-thin90.a2m.gz # 1npsA.t05-thin90.a2m with 9 sequences, total weight= 7.00568 avg weight= 0.778409 20 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1npsA/info/1npsA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1npsA/nostruct-align/1npsA.t05-thin90.a2m.gz, have 101990 columns in 428 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ypqA/nostruct-align/1ypqA.t05-thin90.a2m.gz # 1ypqA.t05-thin90.a2m with 2204 sequences, total weight= 2204 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04558 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ypqA/info/1ypqA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1ypqA/nostruct-align/1ypqA.t05-thin90.a2m.gz, have 102121 columns in 429 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1arb/nostruct-align/1arb.t05-thin90.a2m.gz # 1arb.t05-thin90.a2m with 909 sequences, total weight= 118.703 avg weight= 0.130587 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30121 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1arb/info/1arb.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1arb/nostruct-align/1arb.t05-thin90.a2m.gz, have 102384 columns in 430 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jyaA/nostruct-align/1jyaA.t05-thin90.a2m.gz # 1jyaA.t05-thin90.a2m with 5 sequences, total weight= 4.91883 avg weight= 0.983766 10 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jyaA/info/1jyaA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jyaA/nostruct-align/1jyaA.t05-thin90.a2m.gz, have 102501 columns in 431 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yndA/nostruct-align/1yndA.t05-thin90.a2m.gz # 1yndA.t05-thin90.a2m with 1157 sequences, total weight= 77.3388 avg weight= 0.0668443 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30245 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yndA/info/1yndA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1yndA/nostruct-align/1yndA.t05-thin90.a2m.gz, have 102665 columns in 432 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i19A/nostruct-align/1i19A.t05-thin90.a2m.gz # 1i19A.t05-thin90.a2m with 1404 sequences, total weight= 797.768 avg weight= 0.568211 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30687 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i19A/info/1i19A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i19A/nostruct-align/1i19A.t05-thin90.a2m.gz, have 103206 columns in 433 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dljA/nostruct-align/1dljA.t05-thin90.a2m.gz # 1dljA.t05-thin90.a2m with 3204 sequences, total weight= 3204 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01832 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dljA/info/1dljA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dljA/nostruct-align/1dljA.t05-thin90.a2m.gz, have 103608 columns in 434 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1go3E/nostruct-align/1go3E.t05-thin90.a2m.gz # 1go3E.t05-thin90.a2m with 248 sequences, total weight= 248 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19617 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1go3E/info/1go3E.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1go3E/nostruct-align/1go3E.t05-thin90.a2m.gz, have 103785 columns in 435 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fo8A/nostruct-align/1fo8A.t05-thin90.a2m.gz # 1fo8A.t05-thin90.a2m with 2657 sequences, total weight= 2657 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.872702 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fo8A/info/1fo8A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fo8A/nostruct-align/1fo8A.t05-thin90.a2m.gz, have 104115 columns in 436 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bdo/nostruct-align/1bdo.t05-thin90.a2m.gz # 1bdo.t05-thin90.a2m with 682 sequences, total weight= 45.4398 avg weight= 0.0666273 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30157 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bdo/info/1bdo.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bdo/nostruct-align/1bdo.t05-thin90.a2m.gz, have 104195 columns in 437 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rwhA/nostruct-align/1rwhA.t05-thin90.a2m.gz # 1rwhA.t05-thin90.a2m with 74 sequences, total weight= 74 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12054 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rwhA/info/1rwhA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rwhA/nostruct-align/1rwhA.t05-thin90.a2m.gz, have 104949 columns in 438 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j7xA/nostruct-align/1j7xA.t05-thin90.a2m.gz # 1j7xA.t05-thin90.a2m with 517 sequences, total weight= 517 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2018 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j7xA/info/1j7xA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j7xA/nostruct-align/1j7xA.t05-thin90.a2m.gz, have 105251 columns in 439 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ukkA/nostruct-align/1ukkA.t05-thin90.a2m.gz # 1ukkA.t05-thin90.a2m with 458 sequences, total weight= 458 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11315 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ukkA/info/1ukkA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ukkA/nostruct-align/1ukkA.t05-thin90.a2m.gz, have 105392 columns in 440 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m15A/nostruct-align/1m15A.t05-thin90.a2m.gz # 1m15A.t05-thin90.a2m with 206 sequences, total weight= 23.4857 avg weight= 0.114008 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m15A/info/1m15A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m15A/nostruct-align/1m15A.t05-thin90.a2m.gz, have 105748 columns in 441 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bkrA/nostruct-align/1bkrA.t05-thin90.a2m.gz # 1bkrA.t05-thin90.a2m with 317 sequences, total weight= 109.822 avg weight= 0.346442 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30352 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bkrA/info/1bkrA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bkrA/nostruct-align/1bkrA.t05-thin90.a2m.gz, have 105856 columns in 442 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qlwA/nostruct-align/1qlwA.t05-thin90.a2m.gz # 1qlwA.t05-thin90.a2m with 7555 sequences, total weight= 7555 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.757498 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qlwA/info/1qlwA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qlwA/nostruct-align/1qlwA.t05-thin90.a2m.gz, have 106174 columns in 443 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x8vA/nostruct-align/1x8vA.t05-thin90.a2m.gz # 1x8vA.t05-thin90.a2m with 4544 sequences, total weight= 4544 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02839 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x8vA/info/1x8vA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1x8vA/nostruct-align/1x8vA.t05-thin90.a2m.gz, have 106603 columns in 444 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1elkA/nostruct-align/1elkA.t05-thin90.a2m.gz # 1elkA.t05-thin90.a2m with 261 sequences, total weight= 261 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27678 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1elkA/info/1elkA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1elkA/nostruct-align/1elkA.t05-thin90.a2m.gz, have 106756 columns in 445 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f1mA/nostruct-align/1f1mA.t05-thin90.a2m.gz # 1f1mA.t05-thin90.a2m with 130 sequences, total weight= 5.90468 avg weight= 0.0454206 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f1mA/info/1f1mA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f1mA/nostruct-align/1f1mA.t05-thin90.a2m.gz, have 106918 columns in 446 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vkkA/nostruct-align/1vkkA.t05-thin90.a2m.gz # 1vkkA.t05-thin90.a2m with 254 sequences, total weight= 254 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28931 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vkkA/info/1vkkA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vkkA/nostruct-align/1vkkA.t05-thin90.a2m.gz, have 107055 columns in 447 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r2qA/nostruct-align/1r2qA.t05-thin90.a2m.gz # 1r2qA.t05-thin90.a2m with 4064 sequences, total weight= 4064 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1275 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r2qA/info/1r2qA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r2qA/nostruct-align/1r2qA.t05-thin90.a2m.gz, have 107225 columns in 448 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1edg/nostruct-align/1edg.t05-thin90.a2m.gz # 1edg.t05-thin90.a2m with 1988 sequences, total weight= 1988 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.86731 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1edg/info/1edg.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1edg/nostruct-align/1edg.t05-thin90.a2m.gz, have 107605 columns in 449 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cnzA/nostruct-align/1cnzA.t05-thin90.a2m.gz # 1cnzA.t05-thin90.a2m with 754 sequences, total weight= 60.5921 avg weight= 0.0803609 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30095 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cnzA/info/1cnzA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cnzA/nostruct-align/1cnzA.t05-thin90.a2m.gz, have 107968 columns in 450 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w96A/nostruct-align/1w96A.t05-thin90.a2m.gz # 1w96A.t05-thin90.a2m with 2796 sequences, total weight= 2796 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14863 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w96A/info/1w96A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w96A/nostruct-align/1w96A.t05-thin90.a2m.gz, have 108517 columns in 451 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k4nA/nostruct-align/1k4nA.t05-thin90.a2m.gz # 1k4nA.t05-thin90.a2m with 27 sequences, total weight= 10.8189 avg weight= 0.400699 31 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k4nA/info/1k4nA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k4nA/nostruct-align/1k4nA.t05-thin90.a2m.gz, have 108700 columns in 452 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gxrA/nostruct-align/1gxrA.t05-thin90.a2m.gz # 1gxrA.t05-thin90.a2m with 9251 sequences, total weight= 9251 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.761747 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gxrA/info/1gxrA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gxrA/nostruct-align/1gxrA.t05-thin90.a2m.gz, have 109035 columns in 453 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qv9A/nostruct-align/1qv9A.t05-thin90.a2m.gz # 1qv9A.t05-thin90.a2m with 10 sequences, total weight= 3.4915 avg weight= 0.34915 14 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qv9A/info/1qv9A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qv9A/nostruct-align/1qv9A.t05-thin90.a2m.gz, have 109317 columns in 454 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rwiA/nostruct-align/1rwiA.t05-thin90.a2m.gz # 1rwiA.t05-thin90.a2m with 8141 sequences, total weight= 8141 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.748278 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rwiA/info/1rwiA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rwiA/nostruct-align/1rwiA.t05-thin90.a2m.gz, have 109573 columns in 455 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2dpmA/nostruct-align/2dpmA.t05-thin90.a2m.gz # 2dpmA.t05-thin90.a2m with 276 sequences, total weight= 276 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09824 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2dpmA/info/2dpmA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2d/2dpmA/nostruct-align/2dpmA.t05-thin90.a2m.gz, have 109831 columns in 456 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u14A/nostruct-align/1u14A.t05-thin90.a2m.gz # 1u14A.t05-thin90.a2m with 45 sequences, total weight= 16.6344 avg weight= 0.369653 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u14A/info/1u14A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1u14A/nostruct-align/1u14A.t05-thin90.a2m.gz, have 110000 columns in 457 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54H/nostruct-align/1v54H.t05-thin90.a2m.gz # 1v54H.t05-thin90.a2m with 45 sequences, total weight= 7.85568 avg weight= 0.174571 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54H/info/1v54H.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v54H/nostruct-align/1v54H.t05-thin90.a2m.gz, have 110079 columns in 458 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bx4A/nostruct-align/1bx4A.t05-thin90.a2m.gz # 1bx4A.t05-thin90.a2m with 1759 sequences, total weight= 1759 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02007 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bx4A/info/1bx4A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bx4A/nostruct-align/1bx4A.t05-thin90.a2m.gz, have 110421 columns in 459 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e42A/nostruct-align/1e42A.t05-thin90.a2m.gz # 1e42A.t05-thin90.a2m with 38 sequences, total weight= 18.1336 avg weight= 0.4772 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e42A/info/1e42A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e42A/nostruct-align/1e42A.t05-thin90.a2m.gz, have 110654 columns in 460 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t56A/nostruct-align/1t56A.t05-thin90.a2m.gz # 1t56A.t05-thin90.a2m with 3679 sequences, total weight= 3679 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.818612 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t56A/info/1t56A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t56A/nostruct-align/1t56A.t05-thin90.a2m.gz, have 110847 columns in 461 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tmxA/nostruct-align/1tmxA.t05-thin90.a2m.gz # 1tmxA.t05-thin90.a2m with 295 sequences, total weight= 109.246 avg weight= 0.370327 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30084 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tmxA/info/1tmxA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tmxA/nostruct-align/1tmxA.t05-thin90.a2m.gz, have 111139 columns in 462 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lmiA/nostruct-align/1lmiA.t05-thin90.a2m.gz # 1lmiA.t05-thin90.a2m with 3 sequences, total weight= 3 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17891 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lmiA/info/1lmiA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lmiA/nostruct-align/1lmiA.t05-thin90.a2m.gz, have 111270 columns in 463 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gp0A/nostruct-align/1gp0A.t05-thin90.a2m.gz # 1gp0A.t05-thin90.a2m with 342 sequences, total weight= 342 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27596 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gp0A/info/1gp0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gp0A/nostruct-align/1gp0A.t05-thin90.a2m.gz, have 111403 columns in 464 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1opd/nostruct-align/1opd.t05-thin90.a2m.gz # 1opd.t05-thin90.a2m with 268 sequences, total weight= 27.9014 avg weight= 0.10411 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1opd/info/1opd.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1opd/nostruct-align/1opd.t05-thin90.a2m.gz, have 111488 columns in 465 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vl7A/nostruct-align/1vl7A.t05-thin90.a2m.gz # 1vl7A.t05-thin90.a2m with 398 sequences, total weight= 398 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01814 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vl7A/info/1vl7A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vl7A/nostruct-align/1vl7A.t05-thin90.a2m.gz, have 111623 columns in 466 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mqoA/nostruct-align/1mqoA.t05-thin90.a2m.gz # 1mqoA.t05-thin90.a2m with 3238 sequences, total weight= 3238 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.833761 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mqoA/info/1mqoA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mqoA/nostruct-align/1mqoA.t05-thin90.a2m.gz, have 111844 columns in 467 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a73A/nostruct-align/1a73A.t05-thin90.a2m.gz # 1a73A.t05-thin90.a2m with 20 sequences, total weight= 20 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13338 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a73A/info/1a73A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1a73A/nostruct-align/1a73A.t05-thin90.a2m.gz, have 112006 columns in 468 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1no5A/nostruct-align/1no5A.t05-thin90.a2m.gz # 1no5A.t05-thin90.a2m with 410 sequences, total weight= 410 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0687 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1no5A/info/1no5A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1no5A/nostruct-align/1no5A.t05-thin90.a2m.gz, have 112106 columns in 469 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fltX/nostruct-align/1fltX.t05-thin90.a2m.gz # 1fltX.t05-thin90.a2m with 57 sequences, total weight= 29.8817 avg weight= 0.524241 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fltX/info/1fltX.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fltX/nostruct-align/1fltX.t05-thin90.a2m.gz, have 112201 columns in 470 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lf7A/nostruct-align/1lf7A.t05-thin90.a2m.gz # 1lf7A.t05-thin90.a2m with 480 sequences, total weight= 480 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.945098 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lf7A/info/1lf7A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lf7A/nostruct-align/1lf7A.t05-thin90.a2m.gz, have 112365 columns in 471 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ew0A/nostruct-align/1ew0A.t05-thin90.a2m.gz # 1ew0A.t05-thin90.a2m with 6796 sequences, total weight= 6796 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.858277 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ew0A/info/1ew0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ew0A/nostruct-align/1ew0A.t05-thin90.a2m.gz, have 112495 columns in 472 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nxuA/nostruct-align/1nxuA.t05-thin90.a2m.gz # 1nxuA.t05-thin90.a2m with 140 sequences, total weight= 38.5373 avg weight= 0.275266 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nxuA/info/1nxuA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nxuA/nostruct-align/1nxuA.t05-thin90.a2m.gz, have 112827 columns in 473 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f9yA/nostruct-align/1f9yA.t05-thin90.a2m.gz # 1f9yA.t05-thin90.a2m with 283 sequences, total weight= 37.9251 avg weight= 0.134011 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30058 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f9yA/info/1f9yA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f9yA/nostruct-align/1f9yA.t05-thin90.a2m.gz, have 112985 columns in 474 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3e/3ezmA/nostruct-align/3ezmA.t05-thin90.a2m.gz # 3ezmA.t05-thin90.a2m with 4 sequences, total weight= 3.93864 avg weight= 0.98466 8 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3e/3ezmA/info/3ezmA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/3e/3ezmA/nostruct-align/3ezmA.t05-thin90.a2m.gz, have 113086 columns in 475 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vmhA/nostruct-align/1vmhA.t05-thin90.a2m.gz # 1vmhA.t05-thin90.a2m with 179 sequences, total weight= 16.4639 avg weight= 0.0919769 43 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vmhA/info/1vmhA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vmhA/nostruct-align/1vmhA.t05-thin90.a2m.gz, have 113215 columns in 476 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h05A/nostruct-align/1h05A.t05-thin90.a2m.gz # 1h05A.t05-thin90.a2m with 208 sequences, total weight= 11.9575 avg weight= 0.0574881 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h05A/info/1h05A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h05A/nostruct-align/1h05A.t05-thin90.a2m.gz, have 113353 columns in 477 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s7iA/nostruct-align/1s7iA.t05-thin90.a2m.gz # 1s7iA.t05-thin90.a2m with 116 sequences, total weight= 50.7252 avg weight= 0.437286 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s7iA/info/1s7iA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s7iA/nostruct-align/1s7iA.t05-thin90.a2m.gz, have 113477 columns in 478 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p9hA/nostruct-align/1p9hA.t05-thin90.a2m.gz # 1p9hA.t05-thin90.a2m with 499 sequences, total weight= 65.8755 avg weight= 0.132015 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p9hA/info/1p9hA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p9hA/nostruct-align/1p9hA.t05-thin90.a2m.gz, have 113656 columns in 479 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mwqA/nostruct-align/1mwqA.t05-thin90.a2m.gz # 1mwqA.t05-thin90.a2m with 187 sequences, total weight= 96.2895 avg weight= 0.514917 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30124 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mwqA/info/1mwqA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mwqA/nostruct-align/1mwqA.t05-thin90.a2m.gz, have 113756 columns in 480 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ifrA/nostruct-align/1ifrA.t05-thin90.a2m.gz # 1ifrA.t05-thin90.a2m with 99 sequences, total weight= 30.2177 avg weight= 0.305229 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ifrA/info/1ifrA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ifrA/nostruct-align/1ifrA.t05-thin90.a2m.gz, have 113869 columns in 481 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ej0A/nostruct-align/1ej0A.t05-thin90.a2m.gz # 1ej0A.t05-thin90.a2m with 1399 sequences, total weight= 1399 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04577 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ej0A/info/1ej0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ej0A/nostruct-align/1ej0A.t05-thin90.a2m.gz, have 114049 columns in 482 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kq6A/nostruct-align/1kq6A.t05-thin90.a2m.gz # 1kq6A.t05-thin90.a2m with 447 sequences, total weight= 447 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0643 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kq6A/info/1kq6A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kq6A/nostruct-align/1kq6A.t05-thin90.a2m.gz, have 114189 columns in 483 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3s/3sdhA/nostruct-align/3sdhA.t05-thin90.a2m.gz # 3sdhA.t05-thin90.a2m with 972 sequences, total weight= 972 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21142 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3s/3sdhA/info/3sdhA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/3s/3sdhA/nostruct-align/3sdhA.t05-thin90.a2m.gz, have 114334 columns in 484 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1snyA/nostruct-align/1snyA.t05-thin90.a2m.gz # 1snyA.t05-thin90.a2m with 9368 sequences, total weight= 9368 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10169 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1snyA/info/1snyA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1snyA/nostruct-align/1snyA.t05-thin90.a2m.gz, have 114582 columns in 485 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x6oA/nostruct-align/1x6oA.t05-thin90.a2m.gz # 1x6oA.t05-thin90.a2m with 96 sequences, total weight= 17.2906 avg weight= 0.18011 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x6oA/info/1x6oA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1x6oA/nostruct-align/1x6oA.t05-thin90.a2m.gz, have 114725 columns in 486 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jpzA/nostruct-align/1jpzA.t05-thin90.a2m.gz # 1jpzA.t05-thin90.a2m with 4576 sequences, total weight= 4576 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01101 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jpzA/info/1jpzA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jpzA/nostruct-align/1jpzA.t05-thin90.a2m.gz, have 115181 columns in 487 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2t/2tnfA/nostruct-align/2tnfA.t05-thin90.a2m.gz # 2tnfA.t05-thin90.a2m with 168 sequences, total weight= 136.283 avg weight= 0.811207 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30072 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2t/2tnfA/info/2tnfA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2t/2tnfA/nostruct-align/2tnfA.t05-thin90.a2m.gz, have 115329 columns in 488 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uwfA/nostruct-align/1uwfA.t05-thin90.a2m.gz # 1uwfA.t05-thin90.a2m with 7 sequences, total weight= 4.32731 avg weight= 0.618188 14 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uwfA/info/1uwfA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uwfA/nostruct-align/1uwfA.t05-thin90.a2m.gz, have 115487 columns in 489 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d4xG/nostruct-align/1d4xG.t05-thin90.a2m.gz # 1d4xG.t05-thin90.a2m with 552 sequences, total weight= 552 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12425 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d4xG/info/1d4xG.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d4xG/nostruct-align/1d4xG.t05-thin90.a2m.gz, have 115611 columns in 490 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f86A/nostruct-align/1f86A.t05-thin90.a2m.gz # 1f86A.t05-thin90.a2m with 118 sequences, total weight= 16.0542 avg weight= 0.136052 41 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f86A/info/1f86A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f86A/nostruct-align/1f86A.t05-thin90.a2m.gz, have 115726 columns in 491 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1orrA/nostruct-align/1orrA.t05-thin90.a2m.gz # 1orrA.t05-thin90.a2m with 10768 sequences, total weight= 10768 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.889364 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1orrA/info/1orrA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1orrA/nostruct-align/1orrA.t05-thin90.a2m.gz, have 116064 columns in 492 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m4iA/nostruct-align/1m4iA.t05-thin90.a2m.gz # 1m4iA.t05-thin90.a2m with 5465 sequences, total weight= 5465 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.756147 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m4iA/info/1m4iA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m4iA/nostruct-align/1m4iA.t05-thin90.a2m.gz, have 116245 columns in 493 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rtqA/nostruct-align/1rtqA.t05-thin90.a2m.gz # 1rtqA.t05-thin90.a2m with 2296 sequences, total weight= 2296 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.87975 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rtqA/info/1rtqA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rtqA/nostruct-align/1rtqA.t05-thin90.a2m.gz, have 116536 columns in 494 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g6sA/nostruct-align/1g6sA.t05-thin90.a2m.gz # 1g6sA.t05-thin90.a2m with 598 sequences, total weight= 110.327 avg weight= 0.184494 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30528 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g6sA/info/1g6sA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g6sA/nostruct-align/1g6sA.t05-thin90.a2m.gz, have 116963 columns in 495 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r2mA/nostruct-align/1r2mA.t05-thin90.a2m.gz # 1r2mA.t05-thin90.a2m with 19 sequences, total weight= 4.10319 avg weight= 0.215957 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r2mA/info/1r2mA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r2mA/nostruct-align/1r2mA.t05-thin90.a2m.gz, have 117033 columns in 496 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nqzA/nostruct-align/1nqzA.t05-thin90.a2m.gz # 1nqzA.t05-thin90.a2m with 2536 sequences, total weight= 2536 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.859328 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nqzA/info/1nqzA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nqzA/nostruct-align/1nqzA.t05-thin90.a2m.gz, have 117204 columns in 497 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2e/2eng/nostruct-align/2eng.t05-thin90.a2m.gz # 2eng.t05-thin90.a2m with 35 sequences, total weight= 5.85779 avg weight= 0.167365 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2e/2eng/info/2eng.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2e/2eng/nostruct-align/2eng.t05-thin90.a2m.gz, have 117409 columns in 498 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kafA/nostruct-align/1kafA.t05-thin90.a2m.gz # 1kafA.t05-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.964603 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kafA/info/1kafA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kafA/nostruct-align/1kafA.t05-thin90.a2m.gz, have 117517 columns in 499 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1ku3A/nostruct-align/1ku3A.t05-thin90.a2m.gz # 1ku3A.t05-thin90.a2m with 243 sequences, total weight= 10.7588 avg weight= 0.044275 41 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1ku3A/info/1ku3A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1ku3A/nostruct-align/1ku3A.t05-thin90.a2m.gz, have 117578 columns in 500 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rkqA/nostruct-align/1rkqA.t05-thin90.a2m.gz # 1rkqA.t05-thin90.a2m with 3343 sequences, total weight= 3343 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.973284 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rkqA/info/1rkqA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rkqA/nostruct-align/1rkqA.t05-thin90.a2m.gz, have 117849 columns in 501 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qg8A/nostruct-align/1qg8A.t05-thin90.a2m.gz # 1qg8A.t05-thin90.a2m with 4120 sequences, total weight= 4120 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.82602 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qg8A/info/1qg8A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qg8A/nostruct-align/1qg8A.t05-thin90.a2m.gz, have 118087 columns in 502 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lm5A/nostruct-align/1lm5A.t05-thin90.a2m.gz # 1lm5A.t05-thin90.a2m with 219 sequences, total weight= 219 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27634 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lm5A/info/1lm5A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lm5A/nostruct-align/1lm5A.t05-thin90.a2m.gz, have 118276 columns in 503 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cuaA/nostruct-align/2cuaA.t05-thin90.a2m.gz # 2cuaA.t05-thin90.a2m with 961 sequences, total weight= 186.391 avg weight= 0.193956 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31187 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cuaA/info/2cuaA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2c/2cuaA/nostruct-align/2cuaA.t05-thin90.a2m.gz, have 118398 columns in 504 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mla/nostruct-align/1mla.t05-thin90.a2m.gz # 1mla.t05-thin90.a2m with 1453 sequences, total weight= 1453 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2368 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mla/info/1mla.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mla/nostruct-align/1mla.t05-thin90.a2m.gz, have 118703 columns in 505 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f9vA/nostruct-align/1f9vA.t05-thin90.a2m.gz # 1f9vA.t05-thin90.a2m with 1163 sequences, total weight= 89.9811 avg weight= 0.0773698 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3076 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f9vA/info/1f9vA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f9vA/nostruct-align/1f9vA.t05-thin90.a2m.gz, have 119016 columns in 506 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s2oA/nostruct-align/1s2oA.t05-thin90.a2m.gz # 1s2oA.t05-thin90.a2m with 3413 sequences, total weight= 3413 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.894637 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s2oA/info/1s2oA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s2oA/nostruct-align/1s2oA.t05-thin90.a2m.gz, have 119260 columns in 507 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k92A/nostruct-align/1k92A.t05-thin90.a2m.gz # 1k92A.t05-thin90.a2m with 1360 sequences, total weight= 1360 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21533 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k92A/info/1k92A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k92A/nostruct-align/1k92A.t05-thin90.a2m.gz, have 119704 columns in 508 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i4jA/nostruct-align/1i4jA.t05-thin90.a2m.gz # 1i4jA.t05-thin90.a2m with 367 sequences, total weight= 59.0839 avg weight= 0.160992 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30045 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i4jA/info/1i4jA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i4jA/nostruct-align/1i4jA.t05-thin90.a2m.gz, have 119814 columns in 509 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q3oA/nostruct-align/1q3oA.t05-thin90.a2m.gz # 1q3oA.t05-thin90.a2m with 1673 sequences, total weight= 1673 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15139 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q3oA/info/1q3oA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q3oA/nostruct-align/1q3oA.t05-thin90.a2m.gz, have 119918 columns in 510 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1euvA/nostruct-align/1euvA.t05-thin90.a2m.gz # 1euvA.t05-thin90.a2m with 516 sequences, total weight= 516 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.953125 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1euvA/info/1euvA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1euvA/nostruct-align/1euvA.t05-thin90.a2m.gz, have 120139 columns in 511 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d3gA/nostruct-align/1d3gA.t05-thin90.a2m.gz # 1d3gA.t05-thin90.a2m with 2573 sequences, total weight= 2573 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.965092 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d3gA/info/1d3gA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d3gA/nostruct-align/1d3gA.t05-thin90.a2m.gz, have 120499 columns in 512 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uufA/nostruct-align/1uufA.t05-thin90.a2m.gz # 1uufA.t05-thin90.a2m with 3781 sequences, total weight= 3781 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17666 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uufA/info/1uufA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uufA/nostruct-align/1uufA.t05-thin90.a2m.gz, have 120838 columns in 513 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wmaA/nostruct-align/1wmaA.t05-thin90.a2m.gz # 1wmaA.t05-thin90.a2m with 9469 sequences, total weight= 9469 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03457 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wmaA/info/1wmaA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wmaA/nostruct-align/1wmaA.t05-thin90.a2m.gz, have 121113 columns in 514 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qveA/nostruct-align/1qveA.t05-thin90.a2m.gz # 1qveA.t05-thin90.a2m with 215 sequences, total weight= 58.2564 avg weight= 0.27096 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30036 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qveA/info/1qveA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qveA/nostruct-align/1qveA.t05-thin90.a2m.gz, have 121239 columns in 515 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qazA/nostruct-align/1qazA.t05-thin90.a2m.gz # 1qazA.t05-thin90.a2m with 61 sequences, total weight= 61 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.999549 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qazA/info/1qazA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qazA/nostruct-align/1qazA.t05-thin90.a2m.gz, have 121590 columns in 516 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cczA/nostruct-align/1cczA.t05-thin90.a2m.gz # 1cczA.t05-thin90.a2m with 10557 sequences, total weight= 10557 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.94408 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cczA/info/1cczA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cczA/nostruct-align/1cczA.t05-thin90.a2m.gz, have 121761 columns in 517 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p0zA/nostruct-align/1p0zA.t05-thin90.a2m.gz # 1p0zA.t05-thin90.a2m with 72 sequences, total weight= 26.8767 avg weight= 0.373287 43 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p0zA/info/1p0zA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p0zA/nostruct-align/1p0zA.t05-thin90.a2m.gz, have 121892 columns in 518 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n9eA/nostruct-align/1n9eA.t05-thin90.a2m.gz # 1n9eA.t05-thin90.a2m with 147 sequences, total weight= 76.8089 avg weight= 0.52251 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n9eA/info/1n9eA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n9eA/nostruct-align/1n9eA.t05-thin90.a2m.gz, have 122627 columns in 519 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l8bA/nostruct-align/1l8bA.t05-thin90.a2m.gz # 1l8bA.t05-thin90.a2m with 173 sequences, total weight= 101.112 avg weight= 0.584462 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30123 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l8bA/info/1l8bA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1l8bA/nostruct-align/1l8bA.t05-thin90.a2m.gz, have 122804 columns in 520 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vkeA/nostruct-align/1vkeA.t05-thin90.a2m.gz # 1vkeA.t05-thin90.a2m with 466 sequences, total weight= 466 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06937 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vkeA/info/1vkeA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vkeA/nostruct-align/1vkeA.t05-thin90.a2m.gz, have 122921 columns in 521 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t05-thin90.a2m.gz # 1b8oA.t05-thin90.a2m with 709 sequences, total weight= 709 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08312 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b8oA/info/1b8oA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t05-thin90.a2m.gz, have 123201 columns in 522 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vcaA/nostruct-align/1vcaA.t05-thin90.a2m.gz # 1vcaA.t05-thin90.a2m with 10029 sequences, total weight= 10029 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.864146 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vcaA/info/1vcaA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vcaA/nostruct-align/1vcaA.t05-thin90.a2m.gz, have 123400 columns in 523 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qq9A/nostruct-align/1qq9A.t05-thin90.a2m.gz # 1qq9A.t05-thin90.a2m with 2287 sequences, total weight= 2287 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.908902 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qq9A/info/1qq9A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qq9A/nostruct-align/1qq9A.t05-thin90.a2m.gz, have 123677 columns in 524 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xkrA/nostruct-align/1xkrA.t05-thin90.a2m.gz # 1xkrA.t05-thin90.a2m with 140 sequences, total weight= 140 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15649 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xkrA/info/1xkrA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xkrA/nostruct-align/1xkrA.t05-thin90.a2m.gz, have 123882 columns in 525 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uasA/nostruct-align/1uasA.t05-thin90.a2m.gz # 1uasA.t05-thin90.a2m with 385 sequences, total weight= 385 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.994455 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uasA/info/1uasA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uasA/nostruct-align/1uasA.t05-thin90.a2m.gz, have 124244 columns in 526 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y9lA/nostruct-align/1y9lA.t05-thin90.a2m.gz # 1y9lA.t05-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.616166 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y9lA/info/1y9lA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1y9lA/nostruct-align/1y9lA.t05-thin90.a2m.gz, have 124354 columns in 527 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hyvA/nostruct-align/1hyvA.t05-thin90.a2m.gz # 1hyvA.t05-thin90.a2m with 258 sequences, total weight= 77.3535 avg weight= 0.29982 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30087 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hyvA/info/1hyvA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hyvA/nostruct-align/1hyvA.t05-thin90.a2m.gz, have 124498 columns in 528 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uxy/nostruct-align/1uxy.t05-thin90.a2m.gz # 1uxy.t05-thin90.a2m with 1250 sequences, total weight= 1250 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12121 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uxy/info/1uxy.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uxy/nostruct-align/1uxy.t05-thin90.a2m.gz, have 124838 columns in 529 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1avwB/nostruct-align/1avwB.t05-thin90.a2m.gz # 1avwB.t05-thin90.a2m with 132 sequences, total weight= 48.9784 avg weight= 0.371048 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1avwB/info/1avwB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1avwB/nostruct-align/1avwB.t05-thin90.a2m.gz, have 125009 columns in 530 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xszA/nostruct-align/1xszA.t05-thin90.a2m.gz # 1xszA.t05-thin90.a2m with 275 sequences, total weight= 275 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19607 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xszA/info/1xszA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xszA/nostruct-align/1xszA.t05-thin90.a2m.gz, have 125365 columns in 531 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e43A/nostruct-align/1e43A.t05-thin90.a2m.gz # 1e43A.t05-thin90.a2m with 1831 sequences, total weight= 1831 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03866 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e43A/info/1e43A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e43A/nostruct-align/1e43A.t05-thin90.a2m.gz, have 125848 columns in 532 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fxoA/nostruct-align/1fxoA.t05-thin90.a2m.gz # 1fxoA.t05-thin90.a2m with 2513 sequences, total weight= 2513 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0112 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fxoA/info/1fxoA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fxoA/nostruct-align/1fxoA.t05-thin90.a2m.gz, have 126140 columns in 533 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q52A/nostruct-align/1q52A.t05-thin90.a2m.gz # 1q52A.t05-thin90.a2m with 2172 sequences, total weight= 2172 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14773 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q52A/info/1q52A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q52A/nostruct-align/1q52A.t05-thin90.a2m.gz, have 126409 columns in 534 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mnaA/nostruct-align/1mnaA.t05-thin90.a2m.gz # 1mnaA.t05-thin90.a2m with 9151 sequences, total weight= 9151 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.954372 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mnaA/info/1mnaA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mnaA/nostruct-align/1mnaA.t05-thin90.a2m.gz, have 126685 columns in 535 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mugA/nostruct-align/1mugA.t05-thin90.a2m.gz # 1mugA.t05-thin90.a2m with 373 sequences, total weight= 373 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19619 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mugA/info/1mugA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mugA/nostruct-align/1mugA.t05-thin90.a2m.gz, have 126850 columns in 536 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1suuA/nostruct-align/1suuA.t05-thin90.a2m.gz # 1suuA.t05-thin90.a2m with 358 sequences, total weight= 119.501 avg weight= 0.333801 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30398 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1suuA/info/1suuA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1suuA/nostruct-align/1suuA.t05-thin90.a2m.gz, have 127143 columns in 537 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nf9A/nostruct-align/1nf9A.t05-thin90.a2m.gz # 1nf9A.t05-thin90.a2m with 736 sequences, total weight= 736 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08859 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nf9A/info/1nf9A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nf9A/nostruct-align/1nf9A.t05-thin90.a2m.gz, have 127350 columns in 538 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bgf/nostruct-align/1bgf.t05-thin90.a2m.gz # 1bgf.t05-thin90.a2m with 56 sequences, total weight= 21.1712 avg weight= 0.378057 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bgf/info/1bgf.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bgf/nostruct-align/1bgf.t05-thin90.a2m.gz, have 127474 columns in 539 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ugiA/nostruct-align/1ugiA.t05-thin90.a2m.gz # 1ugiA.t05-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.584933 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ugiA/info/1ugiA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ugiA/nostruct-align/1ugiA.t05-thin90.a2m.gz, have 127557 columns in 540 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y0uA/nostruct-align/1y0uA.t05-thin90.a2m.gz # 1y0uA.t05-thin90.a2m with 3 sequences, total weight= 3 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19697 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y0uA/info/1y0uA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1y0uA/nostruct-align/1y0uA.t05-thin90.a2m.gz, have 127646 columns in 541 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y66A/nostruct-align/1y66A.t05-thin90.a2m.gz # 1y66A.t05-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.514604 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y66A/info/1y66A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1y66A/nostruct-align/1y66A.t05-thin90.a2m.gz, have 127696 columns in 542 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wdpA/nostruct-align/1wdpA.t05-thin90.a2m.gz # 1wdpA.t05-thin90.a2m with 57 sequences, total weight= 19.0831 avg weight= 0.334791 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wdpA/info/1wdpA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wdpA/nostruct-align/1wdpA.t05-thin90.a2m.gz, have 128189 columns in 543 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bkaA/nostruct-align/2bkaA.t05-thin90.a2m.gz # 2bkaA.t05-thin90.a2m with 12209 sequences, total weight= 12209 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.918984 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bkaA/info/2bkaA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2b/2bkaA/nostruct-align/2bkaA.t05-thin90.a2m.gz, have 128420 columns in 544 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bjqA/nostruct-align/2bjqA.t05-thin90.a2m.gz # 2bjqA.t05-thin90.a2m with 14 sequences, total weight= 6.40599 avg weight= 0.457571 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bjqA/info/2bjqA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2b/2bjqA/nostruct-align/2bjqA.t05-thin90.a2m.gz, have 128760 columns in 545 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sw5A/nostruct-align/1sw5A.t05-thin90.a2m.gz # 1sw5A.t05-thin90.a2m with 378 sequences, total weight= 378 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21214 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sw5A/info/1sw5A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sw5A/nostruct-align/1sw5A.t05-thin90.a2m.gz, have 129030 columns in 546 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mqkL/nostruct-align/1mqkL.t05-thin90.a2m.gz # 1mqkL.t05-thin90.a2m with 10627 sequences, total weight= 23.5576 avg weight= 0.00221677 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mqkL/info/1mqkL.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mqkL/nostruct-align/1mqkL.t05-thin90.a2m.gz, have 129138 columns in 547 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vk1A/nostruct-align/1vk1A.t05-thin90.a2m.gz # 1vk1A.t05-thin90.a2m with 273 sequences, total weight= 148.443 avg weight= 0.543748 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30158 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vk1A/info/1vk1A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vk1A/nostruct-align/1vk1A.t05-thin90.a2m.gz, have 129370 columns in 548 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xk7A/nostruct-align/1xk7A.t05-thin90.a2m.gz # 1xk7A.t05-thin90.a2m with 789 sequences, total weight= 164.268 avg weight= 0.208197 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3101 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xk7A/info/1xk7A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xk7A/nostruct-align/1xk7A.t05-thin90.a2m.gz, have 129777 columns in 549 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2t/2trxA/nostruct-align/2trxA.t05-thin90.a2m.gz # 2trxA.t05-thin90.a2m with 3141 sequences, total weight= 3141 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00834 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2t/2trxA/info/2trxA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2t/2trxA/nostruct-align/2trxA.t05-thin90.a2m.gz, have 129885 columns in 550 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bjfA/nostruct-align/2bjfA.t05-thin90.a2m.gz # 2bjfA.t05-thin90.a2m with 183 sequences, total weight= 183 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1565 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bjfA/info/2bjfA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2b/2bjfA/nostruct-align/2bjfA.t05-thin90.a2m.gz, have 130213 columns in 551 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sqgA/nostruct-align/1sqgA.t05-thin90.a2m.gz # 1sqgA.t05-thin90.a2m with 3953 sequences, total weight= 3953 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.914526 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sqgA/info/1sqgA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sqgA/nostruct-align/1sqgA.t05-thin90.a2m.gz, have 130637 columns in 552 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tvgA/nostruct-align/1tvgA.t05-thin90.a2m.gz # 1tvgA.t05-thin90.a2m with 12 sequences, total weight= 7.22706 avg weight= 0.602255 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tvgA/info/1tvgA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tvgA/nostruct-align/1tvgA.t05-thin90.a2m.gz, have 130773 columns in 553 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h4xA/nostruct-align/1h4xA.t05-thin90.a2m.gz # 1h4xA.t05-thin90.a2m with 435 sequences, total weight= 435 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08431 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h4xA/info/1h4xA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h4xA/nostruct-align/1h4xA.t05-thin90.a2m.gz, have 130884 columns in 554 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v4pA/nostruct-align/1v4pA.t05-thin90.a2m.gz # 1v4pA.t05-thin90.a2m with 672 sequences, total weight= 196.141 avg weight= 0.291877 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31244 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v4pA/info/1v4pA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v4pA/nostruct-align/1v4pA.t05-thin90.a2m.gz, have 131035 columns in 555 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vclA/nostruct-align/1vclA.t05-thin90.a2m.gz # 1vclA.t05-thin90.a2m with 379 sequences, total weight= 143.308 avg weight= 0.378122 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vclA/info/1vclA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vclA/nostruct-align/1vclA.t05-thin90.a2m.gz, have 131467 columns in 556 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w1hA/nostruct-align/1w1hA.t05-thin90.a2m.gz # 1w1hA.t05-thin90.a2m with 74 sequences, total weight= 74 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10654 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w1hA/info/1w1hA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w1hA/nostruct-align/1w1hA.t05-thin90.a2m.gz, have 131614 columns in 557 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ihjA/nostruct-align/1ihjA.t05-thin90.a2m.gz # 1ihjA.t05-thin90.a2m with 1603 sequences, total weight= 1603 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25034 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ihjA/info/1ihjA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ihjA/nostruct-align/1ihjA.t05-thin90.a2m.gz, have 131708 columns in 558 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r62A/nostruct-align/1r62A.t05-thin90.a2m.gz # 1r62A.t05-thin90.a2m with 6555 sequences, total weight= 6555 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18742 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r62A/info/1r62A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r62A/nostruct-align/1r62A.t05-thin90.a2m.gz, have 131844 columns in 559 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y0bA/nostruct-align/1y0bA.t05-thin90.a2m.gz # 1y0bA.t05-thin90.a2m with 1701 sequences, total weight= 1701 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01784 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y0bA/info/1y0bA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1y0bA/nostruct-align/1y0bA.t05-thin90.a2m.gz, have 132037 columns in 560 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nofA/nostruct-align/1nofA.t05-thin90.a2m.gz # 1nofA.t05-thin90.a2m with 295 sequences, total weight= 295 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.895682 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nofA/info/1nofA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nofA/nostruct-align/1nofA.t05-thin90.a2m.gz, have 132420 columns in 561 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ykiA/nostruct-align/1ykiA.t05-thin90.a2m.gz # 1ykiA.t05-thin90.a2m with 904 sequences, total weight= 904 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.958529 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ykiA/info/1ykiA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1ykiA/nostruct-align/1ykiA.t05-thin90.a2m.gz, have 132636 columns in 562 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g3p/nostruct-align/1g3p.t05-thin90.a2m.gz # 1g3p.t05-thin90.a2m with 2412 sequences, total weight= 469.978 avg weight= 0.19485 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32828 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g3p/info/1g3p.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g3p/nostruct-align/1g3p.t05-thin90.a2m.gz, have 132828 columns in 563 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vdwA/nostruct-align/1vdwA.t05-thin90.a2m.gz # 1vdwA.t05-thin90.a2m with 927 sequences, total weight= 927 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19382 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vdwA/info/1vdwA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vdwA/nostruct-align/1vdwA.t05-thin90.a2m.gz, have 133076 columns in 564 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h2cA/nostruct-align/1h2cA.t05-thin90.a2m.gz # 1h2cA.t05-thin90.a2m with 3 sequences, total weight= 2.6571 avg weight= 0.885699 8 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h2cA/info/1h2cA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h2cA/nostruct-align/1h2cA.t05-thin90.a2m.gz, have 133200 columns in 565 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vhuA/nostruct-align/1vhuA.t05-thin90.a2m.gz # 1vhuA.t05-thin90.a2m with 315 sequences, total weight= 315 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15937 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vhuA/info/1vhuA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vhuA/nostruct-align/1vhuA.t05-thin90.a2m.gz, have 133392 columns in 566 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1ju2A/nostruct-align/1ju2A.t05-thin90.a2m.gz # 1ju2A.t05-thin90.a2m with 4618 sequences, total weight= 4618 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.790225 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1ju2A/info/1ju2A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1ju2A/nostruct-align/1ju2A.t05-thin90.a2m.gz, have 133913 columns in 567 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ysqA/nostruct-align/1ysqA.t05-thin90.a2m.gz # 1ysqA.t05-thin90.a2m with 758 sequences, total weight= 758 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14418 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ysqA/info/1ysqA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1ysqA/nostruct-align/1ysqA.t05-thin90.a2m.gz, have 134094 columns in 568 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t9iA/nostruct-align/1t9iA.t05-thin90.a2m.gz # 1t9iA.t05-thin90.a2m with 410 sequences, total weight= 410 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06331 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t9iA/info/1t9iA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t9iA/nostruct-align/1t9iA.t05-thin90.a2m.gz, have 134247 columns in 569 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d2sA/nostruct-align/1d2sA.t05-thin90.a2m.gz # 1d2sA.t05-thin90.a2m with 1230 sequences, total weight= 1230 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.993382 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d2sA/info/1d2sA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d2sA/nostruct-align/1d2sA.t05-thin90.a2m.gz, have 134417 columns in 570 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oh4A/nostruct-align/1oh4A.t05-thin90.a2m.gz # 1oh4A.t05-thin90.a2m with 14 sequences, total weight= 9.6616 avg weight= 0.690114 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oh4A/info/1oh4A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oh4A/nostruct-align/1oh4A.t05-thin90.a2m.gz, have 134591 columns in 571 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ok0A/nostruct-align/1ok0A.t05-thin90.a2m.gz # 1ok0A.t05-thin90.a2m with 8 sequences, total weight= 3.99964 avg weight= 0.499954 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ok0A/info/1ok0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ok0A/nostruct-align/1ok0A.t05-thin90.a2m.gz, have 134665 columns in 572 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1thfD/nostruct-align/1thfD.t05-thin90.a2m.gz # 1thfD.t05-thin90.a2m with 682 sequences, total weight= 682 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22296 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1thfD/info/1thfD.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1thfD/nostruct-align/1thfD.t05-thin90.a2m.gz, have 134918 columns in 573 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/7a/7a3hA/nostruct-align/7a3hA.t05-thin90.a2m.gz # 7a3hA.t05-thin90.a2m with 1997 sequences, total weight= 1997 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.821374 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/7a/7a3hA/info/7a3hA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/7a/7a3hA/nostruct-align/7a3hA.t05-thin90.a2m.gz, have 135218 columns in 574 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ejxC/nostruct-align/1ejxC.t05-thin90.a2m.gz # 1ejxC.t05-thin90.a2m with 2253 sequences, total weight= 2253 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23524 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ejxC/info/1ejxC.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ejxC/nostruct-align/1ejxC.t05-thin90.a2m.gz, have 135774 columns in 575 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tfe/nostruct-align/1tfe.t05-thin90.a2m.gz # 1tfe.t05-thin90.a2m with 410 sequences, total weight= 58.6761 avg weight= 0.143112 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30053 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tfe/info/1tfe.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tfe/nostruct-align/1tfe.t05-thin90.a2m.gz, have 135916 columns in 576 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f94A/nostruct-align/1f94A.t05-thin90.a2m.gz # 1f94A.t05-thin90.a2m with 2 sequences, total weight= 1.94772 avg weight= 0.973858 6 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f94A/info/1f94A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f94A/nostruct-align/1f94A.t05-thin90.a2m.gz, have 135979 columns in 577 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kr4A/nostruct-align/1kr4A.t05-thin90.a2m.gz # 1kr4A.t05-thin90.a2m with 139 sequences, total weight= 24.5173 avg weight= 0.176383 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kr4A/info/1kr4A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kr4A/nostruct-align/1kr4A.t05-thin90.a2m.gz, have 136089 columns in 578 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ryoA/nostruct-align/1ryoA.t05-thin90.a2m.gz # 1ryoA.t05-thin90.a2m with 282 sequences, total weight= 84.3208 avg weight= 0.29901 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30076 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ryoA/info/1ryoA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1ryoA/nostruct-align/1ryoA.t05-thin90.a2m.gz, have 136413 columns in 579 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bu8A/nostruct-align/1bu8A.t05-thin90.a2m.gz # 1bu8A.t05-thin90.a2m with 5391 sequences, total weight= 5391 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0823 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bu8A/info/1bu8A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bu8A/nostruct-align/1bu8A.t05-thin90.a2m.gz, have 136859 columns in 580 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rw1A/nostruct-align/1rw1A.t05-thin90.a2m.gz # 1rw1A.t05-thin90.a2m with 351 sequences, total weight= 81.3882 avg weight= 0.231875 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30262 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rw1A/info/1rw1A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rw1A/nostruct-align/1rw1A.t05-thin90.a2m.gz, have 136973 columns in 581 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y4wA/nostruct-align/1y4wA.t05-thin90.a2m.gz # 1y4wA.t05-thin90.a2m with 457 sequences, total weight= 457 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17278 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y4wA/info/1y4wA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1y4wA/nostruct-align/1y4wA.t05-thin90.a2m.gz, have 137490 columns in 582 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j24A/nostruct-align/1j24A.t05-thin90.a2m.gz # 1j24A.t05-thin90.a2m with 135 sequences, total weight= 84.1435 avg weight= 0.623285 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30094 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j24A/info/1j24A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j24A/nostruct-align/1j24A.t05-thin90.a2m.gz, have 137623 columns in 583 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hxhA/nostruct-align/1hxhA.t05-thin90.a2m.gz # 1hxhA.t05-thin90.a2m with 9248 sequences, total weight= 9248 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12742 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hxhA/info/1hxhA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hxhA/nostruct-align/1hxhA.t05-thin90.a2m.gz, have 137876 columns in 584 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f32A/nostruct-align/1f32A.t05-thin90.a2m.gz # 1f32A.t05-thin90.a2m with 16 sequences, total weight= 8.48816 avg weight= 0.53051 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f32A/info/1f32A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f32A/nostruct-align/1f32A.t05-thin90.a2m.gz, have 138003 columns in 585 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jhgA/nostruct-align/1jhgA.t05-thin90.a2m.gz # 1jhgA.t05-thin90.a2m with 49 sequences, total weight= 20.6095 avg weight= 0.420602 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jhgA/info/1jhgA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jhgA/nostruct-align/1jhgA.t05-thin90.a2m.gz, have 138104 columns in 586 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r0uA/nostruct-align/1r0uA.t05-thin90.a2m.gz # 1r0uA.t05-thin90.a2m with 39 sequences, total weight= 39 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2556 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r0uA/info/1r0uA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r0uA/nostruct-align/1r0uA.t05-thin90.a2m.gz, have 138246 columns in 587 chains # command:CPU_time= 6509.77 sec, elapsed time= 6587.77 sec) # command:# command:# Prefix for input files set to /cse/faculty/karplus/dna/predict-2nd/testing/training-data/ # command:# reading script from file dunbrack-30pc-1763-1.t05-thin90-o_notor2 # Prefix for input files set to # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ed8A/nostruct-align/1ed8A.t05-thin90.a2m.gz # 1ed8A.t05-thin90.a2m with 712 sequences, total weight= 712 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02726 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ed8A/info/1ed8A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ed8A/nostruct-align/1ed8A.t05-thin90.a2m.gz, have 449 columns in 1 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gdm/nostruct-align/2gdm.t05-thin90.a2m.gz # 2gdm.t05-thin90.a2m with 986 sequences, total weight= 986 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18534 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gdm/info/2gdm.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2g/2gdm/nostruct-align/2gdm.t05-thin90.a2m.gz, have 602 columns in 2 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iukA/nostruct-align/1iukA.t05-thin90.a2m.gz # 1iukA.t05-thin90.a2m with 363 sequences, total weight= 117.748 avg weight= 0.324376 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30408 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iukA/info/1iukA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iukA/nostruct-align/1iukA.t05-thin90.a2m.gz, have 738 columns in 3 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1senA/nostruct-align/1senA.t05-thin90.a2m.gz # 1senA.t05-thin90.a2m with 2054 sequences, total weight= 2054 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05992 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1senA/info/1senA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1senA/nostruct-align/1senA.t05-thin90.a2m.gz, have 872 columns in 4 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rm6B/nostruct-align/1rm6B.t05-thin90.a2m.gz # 1rm6B.t05-thin90.a2m with 324 sequences, total weight= 152.914 avg weight= 0.471958 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30186 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rm6B/info/1rm6B.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rm6B/nostruct-align/1rm6B.t05-thin90.a2m.gz, have 1195 columns in 5 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jtvA/nostruct-align/1jtvA.t05-thin90.a2m.gz # 1jtvA.t05-thin90.a2m with 10222 sequences, total weight= 10222 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02661 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jtvA/info/1jtvA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jtvA/nostruct-align/1jtvA.t05-thin90.a2m.gz, have 1473 columns in 6 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g5aA/nostruct-align/1g5aA.t05-thin90.a2m.gz # 1g5aA.t05-thin90.a2m with 1854 sequences, total weight= 1854 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04706 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g5aA/info/1g5aA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g5aA/nostruct-align/1g5aA.t05-thin90.a2m.gz, have 2101 columns in 7 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ro0A/nostruct-align/1ro0A.t05-thin90.a2m.gz # 1ro0A.t05-thin90.a2m with 57 sequences, total weight= 57 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15295 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ro0A/info/1ro0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1ro0A/nostruct-align/1ro0A.t05-thin90.a2m.gz, have 2311 columns in 8 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xg0C/nostruct-align/1xg0C.t05-thin90.a2m.gz # 1xg0C.t05-thin90.a2m with 278 sequences, total weight= 33.5902 avg weight= 0.120828 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xg0C/info/1xg0C.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xg0C/nostruct-align/1xg0C.t05-thin90.a2m.gz, have 2485 columns in 9 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k2eA/nostruct-align/1k2eA.t05-thin90.a2m.gz # 1k2eA.t05-thin90.a2m with 2457 sequences, total weight= 2457 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.848844 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k2eA/info/1k2eA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k2eA/nostruct-align/1k2eA.t05-thin90.a2m.gz, have 2637 columns in 10 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1km4A/nostruct-align/1km4A.t05-thin90.a2m.gz # 1km4A.t05-thin90.a2m with 725 sequences, total weight= 725 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2462 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1km4A/info/1km4A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1km4A/nostruct-align/1km4A.t05-thin90.a2m.gz, have 2849 columns in 11 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cex/nostruct-align/1cex.t05-thin90.a2m.gz # 1cex.t05-thin90.a2m with 285 sequences, total weight= 285 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.958875 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cex/info/1cex.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cex/nostruct-align/1cex.t05-thin90.a2m.gz, have 3046 columns in 12 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qqfA/nostruct-align/1qqfA.t05-thin90.a2m.gz # 1qqfA.t05-thin90.a2m with 514 sequences, total weight= 514 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14162 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qqfA/info/1qqfA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qqfA/nostruct-align/1qqfA.t05-thin90.a2m.gz, have 3323 columns in 13 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gd0A/nostruct-align/1gd0A.t05-thin90.a2m.gz # 1gd0A.t05-thin90.a2m with 95 sequences, total weight= 86.6408 avg weight= 0.912009 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gd0A/info/1gd0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gd0A/nostruct-align/1gd0A.t05-thin90.a2m.gz, have 3441 columns in 14 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r77A/nostruct-align/1r77A.t05-thin90.a2m.gz # 1r77A.t05-thin90.a2m with 19 sequences, total weight= 9.9122 avg weight= 0.521694 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r77A/info/1r77A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r77A/nostruct-align/1r77A.t05-thin90.a2m.gz, have 3540 columns in 15 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x82A/nostruct-align/1x82A.t05-thin90.a2m.gz # 1x82A.t05-thin90.a2m with 746 sequences, total weight= 746 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.864429 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x82A/info/1x82A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1x82A/nostruct-align/1x82A.t05-thin90.a2m.gz, have 3730 columns in 16 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1atzA/nostruct-align/1atzA.t05-thin90.a2m.gz # 1atzA.t05-thin90.a2m with 1573 sequences, total weight= 1573 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02758 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1atzA/info/1atzA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1atzA/nostruct-align/1atzA.t05-thin90.a2m.gz, have 3914 columns in 17 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v9yA/nostruct-align/1v9yA.t05-thin90.a2m.gz # 1v9yA.t05-thin90.a2m with 4746 sequences, total weight= 4746 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.957119 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v9yA/info/1v9yA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v9yA/nostruct-align/1v9yA.t05-thin90.a2m.gz, have 4017 columns in 18 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ocyA/nostruct-align/1ocyA.t05-thin90.a2m.gz # 1ocyA.t05-thin90.a2m with 153 sequences, total weight= 153 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17389 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ocyA/info/1ocyA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ocyA/nostruct-align/1ocyA.t05-thin90.a2m.gz, have 4215 columns in 19 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fobA/nostruct-align/1fobA.t05-thin90.a2m.gz # 1fobA.t05-thin90.a2m with 1588 sequences, total weight= 1588 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.893431 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fobA/info/1fobA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fobA/nostruct-align/1fobA.t05-thin90.a2m.gz, have 4549 columns in 20 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dwkA/nostruct-align/1dwkA.t05-thin90.a2m.gz # 1dwkA.t05-thin90.a2m with 53 sequences, total weight= 10.1383 avg weight= 0.191288 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dwkA/info/1dwkA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dwkA/nostruct-align/1dwkA.t05-thin90.a2m.gz, have 4705 columns in 21 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ugpB/nostruct-align/1ugpB.t05-thin90.a2m.gz # 1ugpB.t05-thin90.a2m with 39 sequences, total weight= 17.7985 avg weight= 0.456372 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ugpB/info/1ugpB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ugpB/nostruct-align/1ugpB.t05-thin90.a2m.gz, have 4931 columns in 22 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ijbA/nostruct-align/1ijbA.t05-thin90.a2m.gz # 1ijbA.t05-thin90.a2m with 1793 sequences, total weight= 1793 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.955897 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ijbA/info/1ijbA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ijbA/nostruct-align/1ijbA.t05-thin90.a2m.gz, have 5133 columns in 23 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lqvA/nostruct-align/1lqvA.t05-thin90.a2m.gz # 1lqvA.t05-thin90.a2m with 1258 sequences, total weight= 110.994 avg weight= 0.0882308 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30417 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lqvA/info/1lqvA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lqvA/nostruct-align/1lqvA.t05-thin90.a2m.gz, have 5305 columns in 24 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xodA/nostruct-align/1xodA.t05-thin90.a2m.gz # 1xodA.t05-thin90.a2m with 64 sequences, total weight= 11.689 avg weight= 0.18264 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xodA/info/1xodA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xodA/nostruct-align/1xodA.t05-thin90.a2m.gz, have 5410 columns in 25 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cc8A/nostruct-align/1cc8A.t05-thin90.a2m.gz # 1cc8A.t05-thin90.a2m with 376 sequences, total weight= 92.2948 avg weight= 0.245465 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30517 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cc8A/info/1cc8A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cc8A/nostruct-align/1cc8A.t05-thin90.a2m.gz, have 5482 columns in 26 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wqjB/nostruct-align/1wqjB.t05-thin90.a2m.gz # 1wqjB.t05-thin90.a2m with 88 sequences, total weight= 20.4865 avg weight= 0.232801 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wqjB/info/1wqjB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wqjB/nostruct-align/1wqjB.t05-thin90.a2m.gz, have 5562 columns in 27 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1on2A/nostruct-align/1on2A.t05-thin90.a2m.gz # 1on2A.t05-thin90.a2m with 388 sequences, total weight= 388 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05558 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1on2A/info/1on2A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1on2A/nostruct-align/1on2A.t05-thin90.a2m.gz, have 5697 columns in 28 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f3uA/nostruct-align/1f3uA.t05-thin90.a2m.gz # 1f3uA.t05-thin90.a2m with 35 sequences, total weight= 22.7831 avg weight= 0.650946 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f3uA/info/1f3uA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f3uA/nostruct-align/1f3uA.t05-thin90.a2m.gz, have 5815 columns in 29 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rqpA/nostruct-align/1rqpA.t05-thin90.a2m.gz # 1rqpA.t05-thin90.a2m with 76 sequences, total weight= 27.0457 avg weight= 0.355864 41 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rqpA/info/1rqpA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rqpA/nostruct-align/1rqpA.t05-thin90.a2m.gz, have 6106 columns in 30 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vpt/nostruct-align/1vpt.t05-thin90.a2m.gz # 1vpt.t05-thin90.a2m with 31 sequences, total weight= 14.6656 avg weight= 0.473083 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vpt/info/1vpt.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vpt/nostruct-align/1vpt.t05-thin90.a2m.gz, have 6397 columns in 31 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p4cA/nostruct-align/1p4cA.t05-thin90.a2m.gz # 1p4cA.t05-thin90.a2m with 2205 sequences, total weight= 2205 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.993911 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p4cA/info/1p4cA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p4cA/nostruct-align/1p4cA.t05-thin90.a2m.gz, have 6750 columns in 32 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s5dA/nostruct-align/1s5dA.t05-thin90.a2m.gz # 1s5dA.t05-thin90.a2m with 36 sequences, total weight= 36 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23673 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s5dA/info/1s5dA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s5dA/nostruct-align/1s5dA.t05-thin90.a2m.gz, have 6968 columns in 33 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m40A/nostruct-align/1m40A.t05-thin90.a2m.gz # 1m40A.t05-thin90.a2m with 682 sequences, total weight= 682 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08254 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m40A/info/1m40A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m40A/nostruct-align/1m40A.t05-thin90.a2m.gz, have 7231 columns in 34 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p5fA/nostruct-align/1p5fA.t05-thin90.a2m.gz # 1p5fA.t05-thin90.a2m with 1120 sequences, total weight= 1120 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13497 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p5fA/info/1p5fA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p5fA/nostruct-align/1p5fA.t05-thin90.a2m.gz, have 7417 columns in 35 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a7s/nostruct-align/1a7s.t05-thin90.a2m.gz # 1a7s.t05-thin90.a2m with 2955 sequences, total weight= 2334.13 avg weight= 0.789892 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3073 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a7s/info/1a7s.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1a7s/nostruct-align/1a7s.t05-thin90.a2m.gz, have 7638 columns in 36 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i58A/nostruct-align/1i58A.t05-thin90.a2m.gz # 1i58A.t05-thin90.a2m with 5874 sequences, total weight= 5874 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24727 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i58A/info/1i58A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i58A/nostruct-align/1i58A.t05-thin90.a2m.gz, have 7827 columns in 37 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uujA/nostruct-align/1uujA.t05-thin90.a2m.gz # 1uujA.t05-thin90.a2m with 24 sequences, total weight= 8.111 avg weight= 0.337958 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uujA/info/1uujA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uujA/nostruct-align/1uujA.t05-thin90.a2m.gz, have 7903 columns in 38 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v8yA/nostruct-align/1v8yA.t05-thin90.a2m.gz # 1v8yA.t05-thin90.a2m with 2481 sequences, total weight= 2481 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.829617 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v8yA/info/1v8yA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v8yA/nostruct-align/1v8yA.t05-thin90.a2m.gz, have 8053 columns in 39 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1usmA/nostruct-align/1usmA.t05-thin90.a2m.gz # 1usmA.t05-thin90.a2m with 169 sequences, total weight= 26.1009 avg weight= 0.154443 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1usmA/info/1usmA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1usmA/nostruct-align/1usmA.t05-thin90.a2m.gz, have 8130 columns in 40 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fr2B/nostruct-align/1fr2B.t05-thin90.a2m.gz # 1fr2B.t05-thin90.a2m with 21 sequences, total weight= 4.90623 avg weight= 0.23363 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fr2B/info/1fr2B.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fr2B/nostruct-align/1fr2B.t05-thin90.a2m.gz, have 8261 columns in 41 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d2vA/nostruct-align/1d2vA.t05-thin90.a2m.gz # 1d2vA.t05-thin90.a2m with 118 sequences, total weight= 29.7985 avg weight= 0.25253 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d2vA/info/1d2vA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d2vA/nostruct-align/1d2vA.t05-thin90.a2m.gz, have 8365 columns in 42 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dz3A/nostruct-align/1dz3A.t05-thin90.a2m.gz # 1dz3A.t05-thin90.a2m with 8996 sequences, total weight= 8996 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25566 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dz3A/info/1dz3A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dz3A/nostruct-align/1dz3A.t05-thin90.a2m.gz, have 8488 columns in 43 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o2dA/nostruct-align/1o2dA.t05-thin90.a2m.gz # 1o2dA.t05-thin90.a2m with 965 sequences, total weight= 965 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17336 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o2dA/info/1o2dA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o2dA/nostruct-align/1o2dA.t05-thin90.a2m.gz, have 8847 columns in 44 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qu9A/nostruct-align/1qu9A.t05-thin90.a2m.gz # 1qu9A.t05-thin90.a2m with 809 sequences, total weight= 809 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29436 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qu9A/info/1qu9A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qu9A/nostruct-align/1qu9A.t05-thin90.a2m.gz, have 8974 columns in 45 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rqwA/nostruct-align/1rqwA.t05-thin90.a2m.gz # 1rqwA.t05-thin90.a2m with 190 sequences, total weight= 22.1551 avg weight= 0.116606 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rqwA/info/1rqwA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rqwA/nostruct-align/1rqwA.t05-thin90.a2m.gz, have 9181 columns in 46 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m9xC/nostruct-align/1m9xC.t05-thin90.a2m.gz # 1m9xC.t05-thin90.a2m with 263 sequences, total weight= 13.2259 avg weight= 0.0502885 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m9xC/info/1m9xC.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m9xC/nostruct-align/1m9xC.t05-thin90.a2m.gz, have 9327 columns in 47 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ruwA/nostruct-align/1ruwA.t05-thin90.a2m.gz # 1ruwA.t05-thin90.a2m with 1821 sequences, total weight= 1579.64 avg weight= 0.867457 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30426 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ruwA/info/1ruwA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1ruwA/nostruct-align/1ruwA.t05-thin90.a2m.gz, have 9396 columns in 48 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p5zB/nostruct-align/1p5zB.t05-thin90.a2m.gz # 1p5zB.t05-thin90.a2m with 3177 sequences, total weight= 3177 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.814722 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p5zB/info/1p5zB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p5zB/nostruct-align/1p5zB.t05-thin90.a2m.gz, have 9625 columns in 49 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1khxA/nostruct-align/1khxA.t05-thin90.a2m.gz # 1khxA.t05-thin90.a2m with 93 sequences, total weight= 29.36 avg weight= 0.315698 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1khxA/info/1khxA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1khxA/nostruct-align/1khxA.t05-thin90.a2m.gz, have 9828 columns in 50 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hbnC/nostruct-align/1hbnC.t05-thin90.a2m.gz # 1hbnC.t05-thin90.a2m with 18 sequences, total weight= 3.31506 avg weight= 0.18417 15 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hbnC/info/1hbnC.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hbnC/nostruct-align/1hbnC.t05-thin90.a2m.gz, have 10075 columns in 51 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bm8/nostruct-align/1bm8.t05-thin90.a2m.gz # 1bm8.t05-thin90.a2m with 57 sequences, total weight= 19.2784 avg weight= 0.338218 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bm8/info/1bm8.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bm8/nostruct-align/1bm8.t05-thin90.a2m.gz, have 10174 columns in 52 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nlrA/nostruct-align/2nlrA.t05-thin90.a2m.gz # 2nlrA.t05-thin90.a2m with 64 sequences, total weight= 34.1899 avg weight= 0.534217 43 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nlrA/info/2nlrA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2n/2nlrA/nostruct-align/2nlrA.t05-thin90.a2m.gz, have 10396 columns in 53 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uebA/nostruct-align/1uebA.t05-thin90.a2m.gz # 1uebA.t05-thin90.a2m with 295 sequences, total weight= 31.6482 avg weight= 0.107282 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uebA/info/1uebA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uebA/nostruct-align/1uebA.t05-thin90.a2m.gz, have 10580 columns in 54 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dytA/nostruct-align/1dytA.t05-thin90.a2m.gz # 1dytA.t05-thin90.a2m with 204 sequences, total weight= 44.4209 avg weight= 0.217749 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dytA/info/1dytA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dytA/nostruct-align/1dytA.t05-thin90.a2m.gz, have 10713 columns in 55 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rreA/nostruct-align/1rreA.t05-thin90.a2m.gz # 1rreA.t05-thin90.a2m with 496 sequences, total weight= 180.604 avg weight= 0.364121 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30865 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rreA/info/1rreA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rreA/nostruct-align/1rreA.t05-thin90.a2m.gz, have 10895 columns in 56 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iwlA/nostruct-align/1iwlA.t05-thin90.a2m.gz # 1iwlA.t05-thin90.a2m with 235 sequences, total weight= 235 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0109 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iwlA/info/1iwlA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iwlA/nostruct-align/1iwlA.t05-thin90.a2m.gz, have 11072 columns in 57 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2biiA/nostruct-align/2biiA.t05-thin90.a2m.gz # 2biiA.t05-thin90.a2m with 323 sequences, total weight= 98.6832 avg weight= 0.305521 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2biiA/info/2biiA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2b/2biiA/nostruct-align/2biiA.t05-thin90.a2m.gz, have 11487 columns in 58 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1evyA/nostruct-align/1evyA.t05-thin90.a2m.gz # 1evyA.t05-thin90.a2m with 3679 sequences, total weight= 3679 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.8834 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1evyA/info/1evyA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1evyA/nostruct-align/1evyA.t05-thin90.a2m.gz, have 11833 columns in 59 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2p/2pvbA/nostruct-align/2pvbA.t05-thin90.a2m.gz # 2pvbA.t05-thin90.a2m with 1636 sequences, total weight= 1636 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2023 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2p/2pvbA/info/2pvbA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2p/2pvbA/nostruct-align/2pvbA.t05-thin90.a2m.gz, have 11940 columns in 60 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jcdA/nostruct-align/1jcdA.t05-thin90.a2m.gz # 1jcdA.t05-thin90.a2m with 9 sequences, total weight= 4.58805 avg weight= 0.509783 12 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jcdA/info/1jcdA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jcdA/nostruct-align/1jcdA.t05-thin90.a2m.gz, have 11990 columns in 61 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a2pA/nostruct-align/1a2pA.t05-thin90.a2m.gz # 1a2pA.t05-thin90.a2m with 45 sequences, total weight= 12.8603 avg weight= 0.285785 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a2pA/info/1a2pA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1a2pA/nostruct-align/1a2pA.t05-thin90.a2m.gz, have 12098 columns in 62 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fn9A/nostruct-align/1fn9A.t05-thin90.a2m.gz # 1fn9A.t05-thin90.a2m with 10 sequences, total weight= 9.0299 avg weight= 0.90299 15 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fn9A/info/1fn9A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fn9A/nostruct-align/1fn9A.t05-thin90.a2m.gz, have 12463 columns in 63 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rfyA/nostruct-align/1rfyA.t05-thin90.a2m.gz # 1rfyA.t05-thin90.a2m with 2 sequences, total weight= 1.97122 avg weight= 0.985608 6 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rfyA/info/1rfyA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rfyA/nostruct-align/1rfyA.t05-thin90.a2m.gz, have 12552 columns in 64 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n1jB/nostruct-align/1n1jB.t05-thin90.a2m.gz # 1n1jB.t05-thin90.a2m with 103 sequences, total weight= 22.124 avg weight= 0.214796 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n1jB/info/1n1jB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n1jB/nostruct-align/1n1jB.t05-thin90.a2m.gz, have 12630 columns in 65 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y0yA/nostruct-align/1y0yA.t05-thin90.a2m.gz # 1y0yA.t05-thin90.a2m with 1960 sequences, total weight= 1960 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.947225 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y0yA/info/1y0yA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1y0yA/nostruct-align/1y0yA.t05-thin90.a2m.gz, have 12965 columns in 66 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j27A/nostruct-align/1j27A.t05-thin90.a2m.gz # 1j27A.t05-thin90.a2m with 45 sequences, total weight= 20.2042 avg weight= 0.448983 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j27A/info/1j27A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j27A/nostruct-align/1j27A.t05-thin90.a2m.gz, have 13063 columns in 67 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g12A/nostruct-align/1g12A.t05-thin90.a2m.gz # 1g12A.t05-thin90.a2m with 52 sequences, total weight= 52 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28642 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g12A/info/1g12A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g12A/nostruct-align/1g12A.t05-thin90.a2m.gz, have 13230 columns in 68 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1ng6A/nostruct-align/1ng6A.t05-thin90.a2m.gz # 1ng6A.t05-thin90.a2m with 149 sequences, total weight= 18.6348 avg weight= 0.125066 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1ng6A/info/1ng6A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1ng6A/nostruct-align/1ng6A.t05-thin90.a2m.gz, have 13378 columns in 69 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q7zA/nostruct-align/1q7zA.t05-thin90.a2m.gz # 1q7zA.t05-thin90.a2m with 627 sequences, total weight= 304.101 avg weight= 0.485009 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30555 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q7zA/info/1q7zA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q7zA/nostruct-align/1q7zA.t05-thin90.a2m.gz, have 13937 columns in 70 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ybkA/nostruct-align/1ybkA.t05-thin90.a2m.gz # 1ybkA.t05-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.59493 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ybkA/info/1ybkA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1ybkA/nostruct-align/1ybkA.t05-thin90.a2m.gz, have 13989 columns in 71 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nc5A/nostruct-align/1nc5A.t05-thin90.a2m.gz # 1nc5A.t05-thin90.a2m with 185 sequences, total weight= 185 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.999646 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nc5A/info/1nc5A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nc5A/nostruct-align/1nc5A.t05-thin90.a2m.gz, have 14352 columns in 72 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1llmC/nostruct-align/1llmC.t05-thin90.a2m.gz # 1llmC.t05-thin90.a2m with 13857 sequences, total weight= 3719.96 avg weight= 0.268453 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.34333 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1llmC/info/1llmC.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1llmC/nostruct-align/1llmC.t05-thin90.a2m.gz, have 14439 columns in 73 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1su8A/nostruct-align/1su8A.t05-thin90.a2m.gz # 1su8A.t05-thin90.a2m with 115 sequences, total weight= 44.6789 avg weight= 0.388512 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1su8A/info/1su8A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1su8A/nostruct-align/1su8A.t05-thin90.a2m.gz, have 15072 columns in 74 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mba/nostruct-align/1mba.t05-thin90.a2m.gz # 1mba.t05-thin90.a2m with 957 sequences, total weight= 957 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23461 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mba/info/1mba.stride-mixed.o_notor2 WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1m/1mba/nostruct-align/1mba.t05-thin90.a2m.gz, have 15218 columns in 75 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tjxA/nostruct-align/1tjxA.t05-thin90.a2m.gz # 1tjxA.t05-thin90.a2m with 2355 sequences, total weight= 2355 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.899174 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tjxA/info/1tjxA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tjxA/nostruct-align/1tjxA.t05-thin90.a2m.gz, have 15374 columns in 76 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n8vA/nostruct-align/1n8vA.t05-thin90.a2m.gz # 1n8vA.t05-thin90.a2m with 73 sequences, total weight= 14.5732 avg weight= 0.199633 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n8vA/info/1n8vA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n8vA/nostruct-align/1n8vA.t05-thin90.a2m.gz, have 15475 columns in 77 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f1uA/nostruct-align/1f1uA.t05-thin90.a2m.gz # 1f1uA.t05-thin90.a2m with 1697 sequences, total weight= 1697 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.961876 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f1uA/info/1f1uA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f1uA/nostruct-align/1f1uA.t05-thin90.a2m.gz, have 15797 columns in 78 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tqjA/nostruct-align/1tqjA.t05-thin90.a2m.gz # 1tqjA.t05-thin90.a2m with 1561 sequences, total weight= 1561 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05352 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tqjA/info/1tqjA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tqjA/nostruct-align/1tqjA.t05-thin90.a2m.gz, have 16014 columns in 79 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oneA/nostruct-align/1oneA.t05-thin90.a2m.gz # 1oneA.t05-thin90.a2m with 545 sequences, total weight= 34.8287 avg weight= 0.0639059 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oneA/info/1oneA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oneA/nostruct-align/1oneA.t05-thin90.a2m.gz, have 16450 columns in 80 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gskA/nostruct-align/1gskA.t05-thin90.a2m.gz # 1gskA.t05-thin90.a2m with 866 sequences, total weight= 866 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07017 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gskA/info/1gskA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gskA/nostruct-align/1gskA.t05-thin90.a2m.gz, have 16952 columns in 81 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j3aA/nostruct-align/1j3aA.t05-thin90.a2m.gz # 1j3aA.t05-thin90.a2m with 328 sequences, total weight= 42.7937 avg weight= 0.130469 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j3aA/info/1j3aA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j3aA/nostruct-align/1j3aA.t05-thin90.a2m.gz, have 17081 columns in 82 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dgwA/nostruct-align/1dgwA.t05-thin90.a2m.gz # 1dgwA.t05-thin90.a2m with 524 sequences, total weight= 524 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17962 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dgwA/info/1dgwA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dgwA/nostruct-align/1dgwA.t05-thin90.a2m.gz, have 17259 columns in 83 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w50A/nostruct-align/1w50A.t05-thin90.a2m.gz # 1w50A.t05-thin90.a2m with 966 sequences, total weight= 966 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15555 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w50A/info/1w50A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w50A/nostruct-align/1w50A.t05-thin90.a2m.gz, have 17636 columns in 84 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gx5A/nostruct-align/1gx5A.t05-thin90.a2m.gz # 1gx5A.t05-thin90.a2m with 216 sequences, total weight= 137.272 avg weight= 0.635518 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30032 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gx5A/info/1gx5A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gx5A/nostruct-align/1gx5A.t05-thin90.a2m.gz, have 18166 columns in 85 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mun/nostruct-align/1mun.t05-thin90.a2m.gz # 1mun.t05-thin90.a2m with 836 sequences, total weight= 836 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17259 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mun/info/1mun.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mun/nostruct-align/1mun.t05-thin90.a2m.gz, have 18391 columns in 86 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54B/nostruct-align/1v54B.t05-thin90.a2m.gz # 1v54B.t05-thin90.a2m with 1816 sequences, total weight= 64.2743 avg weight= 0.0353933 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30139 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54B/info/1v54B.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v54B/nostruct-align/1v54B.t05-thin90.a2m.gz, have 18618 columns in 87 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1owlA/nostruct-align/1owlA.t05-thin90.a2m.gz # 1owlA.t05-thin90.a2m with 418 sequences, total weight= 418 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2486 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1owlA/info/1owlA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1owlA/nostruct-align/1owlA.t05-thin90.a2m.gz, have 19091 columns in 88 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rrmA/nostruct-align/1rrmA.t05-thin90.a2m.gz # 1rrmA.t05-thin90.a2m with 967 sequences, total weight= 967 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1703 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rrmA/info/1rrmA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rrmA/nostruct-align/1rrmA.t05-thin90.a2m.gz, have 19476 columns in 89 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d0dA/nostruct-align/1d0dA.t05-thin90.a2m.gz # 1d0dA.t05-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20764 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d0dA/info/1d0dA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d0dA/nostruct-align/1d0dA.t05-thin90.a2m.gz, have 19536 columns in 90 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ibyA/nostruct-align/1ibyA.t05-thin90.a2m.gz # 1ibyA.t05-thin90.a2m with 2 sequences, total weight= 1.9453 avg weight= 0.972648 6 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ibyA/info/1ibyA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ibyA/nostruct-align/1ibyA.t05-thin90.a2m.gz, have 19648 columns in 91 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o82A/nostruct-align/1o82A.t05-thin90.a2m.gz # 1o82A.t05-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.634682 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o82A/info/1o82A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o82A/nostruct-align/1o82A.t05-thin90.a2m.gz, have 19718 columns in 92 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1brt/nostruct-align/1brt.t05-thin90.a2m.gz # 1brt.t05-thin90.a2m with 7422 sequences, total weight= 7422 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.679606 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1brt/info/1brt.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1brt/nostruct-align/1brt.t05-thin90.a2m.gz, have 19995 columns in 93 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oqqA/nostruct-align/1oqqA.t05-thin90.a2m.gz # 1oqqA.t05-thin90.a2m with 420 sequences, total weight= 305.25 avg weight= 0.726785 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30468 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oqqA/info/1oqqA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oqqA/nostruct-align/1oqqA.t05-thin90.a2m.gz, have 20101 columns in 94 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nrjB/nostruct-align/1nrjB.t05-thin90.a2m.gz # 1nrjB.t05-thin90.a2m with 6931 sequences, total weight= 6931 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.919002 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nrjB/info/1nrjB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nrjB/nostruct-align/1nrjB.t05-thin90.a2m.gz, have 20292 columns in 95 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1behA/nostruct-align/1behA.t05-thin90.a2m.gz # 1behA.t05-thin90.a2m with 356 sequences, total weight= 356 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20268 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1behA/info/1behA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1behA/nostruct-align/1behA.t05-thin90.a2m.gz, have 20476 columns in 96 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gvjA/nostruct-align/1gvjA.t05-thin90.a2m.gz # 1gvjA.t05-thin90.a2m with 279 sequences, total weight= 57.8599 avg weight= 0.207383 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3017 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gvjA/info/1gvjA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gvjA/nostruct-align/1gvjA.t05-thin90.a2m.gz, have 20617 columns in 97 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sgwA/nostruct-align/1sgwA.t05-thin90.a2m.gz # 1sgwA.t05-thin90.a2m with 19960 sequences, total weight= 19960 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27461 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sgwA/info/1sgwA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sgwA/nostruct-align/1sgwA.t05-thin90.a2m.gz, have 20817 columns in 98 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nkiA/nostruct-align/1nkiA.t05-thin90.a2m.gz # 1nkiA.t05-thin90.a2m with 2630 sequences, total weight= 2630 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.87014 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nkiA/info/1nkiA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nkiA/nostruct-align/1nkiA.t05-thin90.a2m.gz, have 20951 columns in 99 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tfzA/nostruct-align/1tfzA.t05-thin90.a2m.gz # 1tfzA.t05-thin90.a2m with 873 sequences, total weight= 873 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12845 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tfzA/info/1tfzA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tfzA/nostruct-align/1tfzA.t05-thin90.a2m.gz, have 21315 columns in 100 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rv9A/nostruct-align/1rv9A.t05-thin90.a2m.gz # 1rv9A.t05-thin90.a2m with 205 sequences, total weight= 46.5233 avg weight= 0.226943 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30046 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rv9A/info/1rv9A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rv9A/nostruct-align/1rv9A.t05-thin90.a2m.gz, have 21557 columns in 101 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ypyA/nostruct-align/1ypyA.t05-thin90.a2m.gz # 1ypyA.t05-thin90.a2m with 32 sequences, total weight= 13.2648 avg weight= 0.414524 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ypyA/info/1ypyA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1ypyA/nostruct-align/1ypyA.t05-thin90.a2m.gz, have 21739 columns in 102 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mg7A/nostruct-align/1mg7A.t05-thin90.a2m.gz # 1mg7A.t05-thin90.a2m with 5 sequences, total weight= 3.67934 avg weight= 0.735869 10 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mg7A/info/1mg7A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mg7A/nostruct-align/1mg7A.t05-thin90.a2m.gz, have 22090 columns in 103 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1us5A/nostruct-align/1us5A.t05-thin90.a2m.gz # 1us5A.t05-thin90.a2m with 3392 sequences, total weight= 3392 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.785264 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1us5A/info/1us5A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1us5A/nostruct-align/1us5A.t05-thin90.a2m.gz, have 22387 columns in 104 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1ctf/nostruct-align/1ctf.t05-thin90.a2m.gz # 1ctf.t05-thin90.a2m with 269 sequences, total weight= 8.32053 avg weight= 0.0309313 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1ctf/info/1ctf.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1ctf/nostruct-align/1ctf.t05-thin90.a2m.gz, have 22455 columns in 105 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gai/nostruct-align/1gai.t05-thin90.a2m.gz # 1gai.t05-thin90.a2m with 213 sequences, total weight= 213 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19259 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gai/info/1gai.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gai/nostruct-align/1gai.t05-thin90.a2m.gz, have 22927 columns in 106 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jsdB/nostruct-align/1jsdB.t05-thin90.a2m.gz # 1jsdB.t05-thin90.a2m with 49 sequences, total weight= 4.98145 avg weight= 0.101662 20 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jsdB/info/1jsdB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jsdB/nostruct-align/1jsdB.t05-thin90.a2m.gz, have 23087 columns in 107 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e9gA/nostruct-align/1e9gA.t05-thin90.a2m.gz # 1e9gA.t05-thin90.a2m with 280 sequences, total weight= 55.2359 avg weight= 0.197271 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e9gA/info/1e9gA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e9gA/nostruct-align/1e9gA.t05-thin90.a2m.gz, have 23371 columns in 108 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lucA/nostruct-align/1lucA.t05-thin90.a2m.gz # 1lucA.t05-thin90.a2m with 999 sequences, total weight= 999 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12891 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lucA/info/1lucA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lucA/nostruct-align/1lucA.t05-thin90.a2m.gz, have 23697 columns in 109 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mtyG/nostruct-align/1mtyG.t05-thin90.a2m.gz # 1mtyG.t05-thin90.a2m with 6 sequences, total weight= 4.054 avg weight= 0.675666 14 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mtyG/info/1mtyG.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mtyG/nostruct-align/1mtyG.t05-thin90.a2m.gz, have 23859 columns in 110 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s5aA/nostruct-align/1s5aA.t05-thin90.a2m.gz # 1s5aA.t05-thin90.a2m with 630 sequences, total weight= 630 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.888981 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s5aA/info/1s5aA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s5aA/nostruct-align/1s5aA.t05-thin90.a2m.gz, have 23998 columns in 111 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1ntvA/nostruct-align/1ntvA.t05-thin90.a2m.gz # 1ntvA.t05-thin90.a2m with 322 sequences, total weight= 322 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10521 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1ntvA/info/1ntvA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1ntvA/nostruct-align/1ntvA.t05-thin90.a2m.gz, have 24150 columns in 112 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h1nA/nostruct-align/1h1nA.t05-thin90.a2m.gz # 1h1nA.t05-thin90.a2m with 1775 sequences, total weight= 1775 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.864799 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h1nA/info/1h1nA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h1nA/nostruct-align/1h1nA.t05-thin90.a2m.gz, have 24455 columns in 113 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sx7A/nostruct-align/1sx7A.t05-thin90.a2m.gz # 1sx7A.t05-thin90.a2m with 108 sequences, total weight= 87.9704 avg weight= 0.81454 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sx7A/info/1sx7A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sx7A/nostruct-align/1sx7A.t05-thin90.a2m.gz, have 24619 columns in 114 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s29A/nostruct-align/1s29A.t05-thin90.a2m.gz # 1s29A.t05-thin90.a2m with 142 sequences, total weight= 32.0572 avg weight= 0.225755 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s29A/info/1s29A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s29A/nostruct-align/1s29A.t05-thin90.a2m.gz, have 24711 columns in 115 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f8mA/nostruct-align/1f8mA.t05-thin90.a2m.gz # 1f8mA.t05-thin90.a2m with 345 sequences, total weight= 92.3839 avg weight= 0.267779 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3004 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f8mA/info/1f8mA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f8mA/nostruct-align/1f8mA.t05-thin90.a2m.gz, have 25138 columns in 116 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1earA/nostruct-align/1earA.t05-thin90.a2m.gz # 1earA.t05-thin90.a2m with 90 sequences, total weight= 46.0558 avg weight= 0.511731 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1earA/info/1earA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1earA/nostruct-align/1earA.t05-thin90.a2m.gz, have 25280 columns in 117 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r9wA/nostruct-align/1r9wA.t05-thin90.a2m.gz # 1r9wA.t05-thin90.a2m with 93 sequences, total weight= 11.5699 avg weight= 0.124408 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r9wA/info/1r9wA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r9wA/nostruct-align/1r9wA.t05-thin90.a2m.gz, have 25418 columns in 118 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1woqA/nostruct-align/1woqA.t05-thin90.a2m.gz # 1woqA.t05-thin90.a2m with 1034 sequences, total weight= 1034 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12215 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1woqA/info/1woqA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1woqA/nostruct-align/1woqA.t05-thin90.a2m.gz, have 25671 columns in 119 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xubA/nostruct-align/1xubA.t05-thin90.a2m.gz # 1xubA.t05-thin90.a2m with 541 sequences, total weight= 541 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18989 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xubA/info/1xubA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xubA/nostruct-align/1xubA.t05-thin90.a2m.gz, have 25949 columns in 120 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vimA/nostruct-align/1vimA.t05-thin90.a2m.gz # 1vimA.t05-thin90.a2m with 1577 sequences, total weight= 1577 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.997044 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vimA/info/1vimA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vimA/nostruct-align/1vimA.t05-thin90.a2m.gz, have 26141 columns in 121 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eluA/nostruct-align/1eluA.t05-thin90.a2m.gz # 1eluA.t05-thin90.a2m with 8056 sequences, total weight= 8056 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.840992 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eluA/info/1eluA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1eluA/nostruct-align/1eluA.t05-thin90.a2m.gz, have 26522 columns in 122 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m65A/nostruct-align/1m65A.t05-thin90.a2m.gz # 1m65A.t05-thin90.a2m with 832 sequences, total weight= 832 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.925328 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m65A/info/1m65A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m65A/nostruct-align/1m65A.t05-thin90.a2m.gz, have 26756 columns in 123 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1whzA/nostruct-align/1whzA.t05-thin90.a2m.gz # 1whzA.t05-thin90.a2m with 68 sequences, total weight= 26.1638 avg weight= 0.384762 37 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1whzA/info/1whzA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1whzA/nostruct-align/1whzA.t05-thin90.a2m.gz, have 26826 columns in 124 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e2kA/nostruct-align/1e2kA.t05-thin90.a2m.gz # 1e2kA.t05-thin90.a2m with 565 sequences, total weight= 565 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07589 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e2kA/info/1e2kA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e2kA/nostruct-align/1e2kA.t05-thin90.a2m.gz, have 27134 columns in 125 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cs6A/nostruct-align/1cs6A.t05-thin90.a2m.gz # 1cs6A.t05-thin90.a2m with 6187 sequences, total weight= 6187 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.852616 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cs6A/info/1cs6A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cs6A/nostruct-align/1cs6A.t05-thin90.a2m.gz, have 27516 columns in 126 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y0hA/nostruct-align/1y0hA.t05-thin90.a2m.gz # 1y0hA.t05-thin90.a2m with 347 sequences, total weight= 347 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00708 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y0hA/info/1y0hA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1y0hA/nostruct-align/1y0hA.t05-thin90.a2m.gz, have 27617 columns in 127 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u7gA/nostruct-align/1u7gA.t05-thin90.a2m.gz # 1u7gA.t05-thin90.a2m with 540 sequences, total weight= 63.7319 avg weight= 0.118022 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30078 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u7gA/info/1u7gA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1u7gA/nostruct-align/1u7gA.t05-thin90.a2m.gz, have 28000 columns in 128 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j2lA/nostruct-align/1j2lA.t05-thin90.a2m.gz # 1j2lA.t05-thin90.a2m with 247 sequences, total weight= 10.6267 avg weight= 0.0430229 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j2lA/info/1j2lA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j2lA/nostruct-align/1j2lA.t05-thin90.a2m.gz, have 28068 columns in 129 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kaeA/nostruct-align/1kaeA.t05-thin90.a2m.gz # 1kaeA.t05-thin90.a2m with 2816 sequences, total weight= 1326.92 avg weight= 0.471207 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32097 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kaeA/info/1kaeA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kaeA/nostruct-align/1kaeA.t05-thin90.a2m.gz, have 28502 columns in 130 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dfmA/nostruct-align/1dfmA.t05-thin90.a2m.gz # 1dfmA.t05-thin90.a2m with 7 sequences, total weight= 7 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20871 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dfmA/info/1dfmA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dfmA/nostruct-align/1dfmA.t05-thin90.a2m.gz, have 28725 columns in 131 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k55A/nostruct-align/1k55A.t05-thin90.a2m.gz # 1k55A.t05-thin90.a2m with 1453 sequences, total weight= 1453 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14665 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k55A/info/1k55A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k55A/nostruct-align/1k55A.t05-thin90.a2m.gz, have 28970 columns in 132 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uk8A/nostruct-align/1uk8A.t05-thin90.a2m.gz # 1uk8A.t05-thin90.a2m with 7742 sequences, total weight= 7742 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.673381 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uk8A/info/1uk8A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uk8A/nostruct-align/1uk8A.t05-thin90.a2m.gz, have 29241 columns in 133 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hz6A/nostruct-align/1hz6A.t05-thin90.a2m.gz # 1hz6A.t05-thin90.a2m with 10 sequences, total weight= 3.18888 avg weight= 0.318888 11 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hz6A/info/1hz6A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hz6A/nostruct-align/1hz6A.t05-thin90.a2m.gz, have 29308 columns in 134 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1inlA/nostruct-align/1inlA.t05-thin90.a2m.gz # 1inlA.t05-thin90.a2m with 8458 sequences, total weight= 8458 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.828078 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1inlA/info/1inlA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1inlA/nostruct-align/1inlA.t05-thin90.a2m.gz, have 29593 columns in 135 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uv7A/nostruct-align/1uv7A.t05-thin90.a2m.gz # 1uv7A.t05-thin90.a2m with 21 sequences, total weight= 8.56902 avg weight= 0.408048 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uv7A/info/1uv7A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uv7A/nostruct-align/1uv7A.t05-thin90.a2m.gz, have 29669 columns in 136 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bo9B/nostruct-align/2bo9B.t05-thin90.a2m.gz # 2bo9B.t05-thin90.a2m with 15 sequences, total weight= 7.33623 avg weight= 0.489082 20 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bo9B/info/2bo9B.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2b/2bo9B/nostruct-align/2bo9B.t05-thin90.a2m.gz, have 29886 columns in 137 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cxqA/nostruct-align/1cxqA.t05-thin90.a2m.gz # 1cxqA.t05-thin90.a2m with 2176 sequences, total weight= 2176 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02216 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cxqA/info/1cxqA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cxqA/nostruct-align/1cxqA.t05-thin90.a2m.gz, have 30029 columns in 138 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bs0A/nostruct-align/1bs0A.t05-thin90.a2m.gz # 1bs0A.t05-thin90.a2m with 8007 sequences, total weight= 8007 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.845867 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bs0A/info/1bs0A.stride-mixed.o_notor2 WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1b/1bs0A/nostruct-align/1bs0A.t05-thin90.a2m.gz, have 30411 columns in 139 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pfbA/nostruct-align/1pfbA.t05-thin90.a2m.gz # 1pfbA.t05-thin90.a2m with 206 sequences, total weight= 26.8326 avg weight= 0.130256 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pfbA/info/1pfbA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pfbA/nostruct-align/1pfbA.t05-thin90.a2m.gz, have 30466 columns in 140 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3s/3sil/nostruct-align/3sil.t05-thin90.a2m.gz # 3sil.t05-thin90.a2m with 658 sequences, total weight= 513.537 avg weight= 0.780452 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30413 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3s/3sil/info/3sil.stride-mixed.o_notor2 WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/3s/3sil/nostruct-align/3sil.t05-thin90.a2m.gz, have 30844 columns in 141 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vhwA/nostruct-align/1vhwA.t05-thin90.a2m.gz # 1vhwA.t05-thin90.a2m with 863 sequences, total weight= 863 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.99021 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vhwA/info/1vhwA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vhwA/nostruct-align/1vhwA.t05-thin90.a2m.gz, have 31081 columns in 142 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xsvA/nostruct-align/1xsvA.t05-thin90.a2m.gz # 1xsvA.t05-thin90.a2m with 47 sequences, total weight= 12.9559 avg weight= 0.275657 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xsvA/info/1xsvA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xsvA/nostruct-align/1xsvA.t05-thin90.a2m.gz, have 31187 columns in 143 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xqaA/nostruct-align/1xqaA.t05-thin90.a2m.gz # 1xqaA.t05-thin90.a2m with 2497 sequences, total weight= 2497 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.943454 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xqaA/info/1xqaA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xqaA/nostruct-align/1xqaA.t05-thin90.a2m.gz, have 31299 columns in 144 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ut1A/nostruct-align/1ut1A.t05-thin90.a2m.gz # 1ut1A.t05-thin90.a2m with 9 sequences, total weight= 5.51544 avg weight= 0.612826 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ut1A/info/1ut1A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ut1A/nostruct-align/1ut1A.t05-thin90.a2m.gz, have 31439 columns in 145 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mr7A/nostruct-align/1mr7A.t05-thin90.a2m.gz # 1mr7A.t05-thin90.a2m with 2126 sequences, total weight= 2126 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.972491 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mr7A/info/1mr7A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mr7A/nostruct-align/1mr7A.t05-thin90.a2m.gz, have 31642 columns in 146 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xkpA/nostruct-align/1xkpA.t05-thin90.a2m.gz # 1xkpA.t05-thin90.a2m with 32 sequences, total weight= 32 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28187 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xkpA/info/1xkpA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xkpA/nostruct-align/1xkpA.t05-thin90.a2m.gz, have 31873 columns in 147 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r89A/nostruct-align/1r89A.t05-thin90.a2m.gz # 1r89A.t05-thin90.a2m with 503 sequences, total weight= 503 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.952284 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r89A/info/1r89A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r89A/nostruct-align/1r89A.t05-thin90.a2m.gz, have 32310 columns in 148 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gv9A/nostruct-align/1gv9A.t05-thin90.a2m.gz # 1gv9A.t05-thin90.a2m with 426 sequences, total weight= 426 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2143 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gv9A/info/1gv9A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gv9A/nostruct-align/1gv9A.t05-thin90.a2m.gz, have 32533 columns in 149 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1koe/nostruct-align/1koe.t05-thin90.a2m.gz # 1koe.t05-thin90.a2m with 46 sequences, total weight= 20.5473 avg weight= 0.446681 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1koe/info/1koe.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1koe/nostruct-align/1koe.t05-thin90.a2m.gz, have 32705 columns in 150 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mfgA/nostruct-align/1mfgA.t05-thin90.a2m.gz # 1mfgA.t05-thin90.a2m with 1570 sequences, total weight= 1570 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26535 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mfgA/info/1mfgA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mfgA/nostruct-align/1mfgA.t05-thin90.a2m.gz, have 32800 columns in 151 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wmhA/nostruct-align/1wmhA.t05-thin90.a2m.gz # 1wmhA.t05-thin90.a2m with 16 sequences, total weight= 5.39775 avg weight= 0.337359 19 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wmhA/info/1wmhA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wmhA/nostruct-align/1wmhA.t05-thin90.a2m.gz, have 32883 columns in 152 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pv5A/nostruct-align/1pv5A.t05-thin90.a2m.gz # 1pv5A.t05-thin90.a2m with 29 sequences, total weight= 29 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22626 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pv5A/info/1pv5A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pv5A/nostruct-align/1pv5A.t05-thin90.a2m.gz, have 33144 columns in 153 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1psrA/nostruct-align/1psrA.t05-thin90.a2m.gz # 1psrA.t05-thin90.a2m with 190 sequences, total weight= 63.7642 avg weight= 0.335601 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30061 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1psrA/info/1psrA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1psrA/nostruct-align/1psrA.t05-thin90.a2m.gz, have 33244 columns in 154 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vj2A/nostruct-align/1vj2A.t05-thin90.a2m.gz # 1vj2A.t05-thin90.a2m with 1943 sequences, total weight= 1943 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.872961 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vj2A/info/1vj2A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vj2A/nostruct-align/1vj2A.t05-thin90.a2m.gz, have 33358 columns in 155 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tjyA/nostruct-align/1tjyA.t05-thin90.a2m.gz # 1tjyA.t05-thin90.a2m with 2045 sequences, total weight= 2045 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.983638 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tjyA/info/1tjyA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tjyA/nostruct-align/1tjyA.t05-thin90.a2m.gz, have 33674 columns in 156 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1smoA/nostruct-align/1smoA.t05-thin90.a2m.gz # 1smoA.t05-thin90.a2m with 12166 sequences, total weight= 29.908 avg weight= 0.00245832 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1smoA/info/1smoA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1smoA/nostruct-align/1smoA.t05-thin90.a2m.gz, have 33787 columns in 157 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kzfA/nostruct-align/1kzfA.t05-thin90.a2m.gz # 1kzfA.t05-thin90.a2m with 245 sequences, total weight= 245 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05825 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kzfA/info/1kzfA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kzfA/nostruct-align/1kzfA.t05-thin90.a2m.gz, have 33985 columns in 158 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nr0A/nostruct-align/1nr0A.t05-thin90.a2m.gz # 1nr0A.t05-thin90.a2m with 8795 sequences, total weight= 8795 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.930939 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nr0A/info/1nr0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nr0A/nostruct-align/1nr0A.t05-thin90.a2m.gz, have 34595 columns in 159 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vyrA/nostruct-align/1vyrA.t05-thin90.a2m.gz # 1vyrA.t05-thin90.a2m with 730 sequences, total weight= 136.573 avg weight= 0.187087 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30887 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vyrA/info/1vyrA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vyrA/nostruct-align/1vyrA.t05-thin90.a2m.gz, have 34958 columns in 160 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nlnA/nostruct-align/1nlnA.t05-thin90.a2m.gz # 1nlnA.t05-thin90.a2m with 37 sequences, total weight= 6.70926 avg weight= 0.181331 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nlnA/info/1nlnA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nlnA/nostruct-align/1nlnA.t05-thin90.a2m.gz, have 35161 columns in 161 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hdhA/nostruct-align/1hdhA.t05-thin90.a2m.gz # 1hdhA.t05-thin90.a2m with 1422 sequences, total weight= 1422 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.880164 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hdhA/info/1hdhA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hdhA/nostruct-align/1hdhA.t05-thin90.a2m.gz, have 35686 columns in 162 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vp6A/nostruct-align/1vp6A.t05-thin90.a2m.gz # 1vp6A.t05-thin90.a2m with 1765 sequences, total weight= 1765 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.944536 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vp6A/info/1vp6A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vp6A/nostruct-align/1vp6A.t05-thin90.a2m.gz, have 35819 columns in 163 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eb6A/nostruct-align/1eb6A.t05-thin90.a2m.gz # 1eb6A.t05-thin90.a2m with 50 sequences, total weight= 44.1452 avg weight= 0.882903 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eb6A/info/1eb6A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1eb6A/nostruct-align/1eb6A.t05-thin90.a2m.gz, have 35996 columns in 164 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v5vA/nostruct-align/1v5vA.t05-thin90.a2m.gz # 1v5vA.t05-thin90.a2m with 633 sequences, total weight= 633 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21666 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v5vA/info/1v5vA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v5vA/nostruct-align/1v5vA.t05-thin90.a2m.gz, have 36395 columns in 165 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yo3A/nostruct-align/1yo3A.t05-thin90.a2m.gz # 1yo3A.t05-thin90.a2m with 143 sequences, total weight= 38.9199 avg weight= 0.272167 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yo3A/info/1yo3A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1yo3A/nostruct-align/1yo3A.t05-thin90.a2m.gz, have 36480 columns in 166 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r9dA/nostruct-align/1r9dA.t05-thin90.a2m.gz # 1r9dA.t05-thin90.a2m with 135 sequences, total weight= 78.4146 avg weight= 0.580849 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r9dA/info/1r9dA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r9dA/nostruct-align/1r9dA.t05-thin90.a2m.gz, have 37266 columns in 167 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gk9B/nostruct-align/1gk9B.t05-thin90.a2m.gz # 1gk9B.t05-thin90.a2m with 137 sequences, total weight= 137 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24538 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gk9B/info/1gk9B.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gk9B/nostruct-align/1gk9B.t05-thin90.a2m.gz, have 37823 columns in 168 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x91A/nostruct-align/1x91A.t05-thin90.a2m.gz # 1x91A.t05-thin90.a2m with 226 sequences, total weight= 226 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00476 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x91A/info/1x91A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1x91A/nostruct-align/1x91A.t05-thin90.a2m.gz, have 37972 columns in 169 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l9lA/nostruct-align/1l9lA.t05-thin90.a2m.gz # 1l9lA.t05-thin90.a2m with 6 sequences, total weight= 3.75355 avg weight= 0.625592 14 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l9lA/info/1l9lA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1l9lA/nostruct-align/1l9lA.t05-thin90.a2m.gz, have 38046 columns in 170 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vlpA/nostruct-align/1vlpA.t05-thin90.a2m.gz # 1vlpA.t05-thin90.a2m with 273 sequences, total weight= 120.207 avg weight= 0.440317 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30149 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vlpA/info/1vlpA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vlpA/nostruct-align/1vlpA.t05-thin90.a2m.gz, have 38464 columns in 171 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vjuA/nostruct-align/1vjuA.t05-thin90.a2m.gz # 1vjuA.t05-thin90.a2m with 152 sequences, total weight= 9.48746 avg weight= 0.0624175 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vjuA/info/1vjuA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vjuA/nostruct-align/1vjuA.t05-thin90.a2m.gz, have 38755 columns in 172 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ogwA/nostruct-align/1ogwA.t05-thin90.a2m.gz # 1ogwA.t05-thin90.a2m with 391 sequences, total weight= 63.4781 avg weight= 0.162348 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30084 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ogwA/info/1ogwA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ogwA/nostruct-align/1ogwA.t05-thin90.a2m.gz, have 38831 columns in 173 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r1tA/nostruct-align/1r1tA.t05-thin90.a2m.gz # 1r1tA.t05-thin90.a2m with 1199 sequences, total weight= 1199 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18195 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r1tA/info/1r1tA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r1tA/nostruct-align/1r1tA.t05-thin90.a2m.gz, have 38929 columns in 174 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h03P/nostruct-align/1h03P.t05-thin90.a2m.gz # 1h03P.t05-thin90.a2m with 1880 sequences, total weight= 1880 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10471 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h03P/info/1h03P.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h03P/nostruct-align/1h03P.t05-thin90.a2m.gz, have 39054 columns in 175 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w4xA/nostruct-align/1w4xA.t05-thin90.a2m.gz # 1w4xA.t05-thin90.a2m with 8466 sequences, total weight= 8466 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01143 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w4xA/info/1w4xA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w4xA/nostruct-align/1w4xA.t05-thin90.a2m.gz, have 39587 columns in 176 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vjpA/nostruct-align/1vjpA.t05-thin90.a2m.gz # 1vjpA.t05-thin90.a2m with 104 sequences, total weight= 23.4123 avg weight= 0.225119 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vjpA/info/1vjpA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vjpA/nostruct-align/1vjpA.t05-thin90.a2m.gz, have 39969 columns in 177 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h6lA/nostruct-align/1h6lA.t05-thin90.a2m.gz # 1h6lA.t05-thin90.a2m with 39 sequences, total weight= 29.2244 avg weight= 0.749344 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h6lA/info/1h6lA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h6lA/nostruct-align/1h6lA.t05-thin90.a2m.gz, have 40322 columns in 178 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oywA/nostruct-align/1oywA.t05-thin90.a2m.gz # 1oywA.t05-thin90.a2m with 6953 sequences, total weight= 6953 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.913218 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oywA/info/1oywA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oywA/nostruct-align/1oywA.t05-thin90.a2m.gz, have 40838 columns in 179 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fp2A/nostruct-align/1fp2A.t05-thin90.a2m.gz # 1fp2A.t05-thin90.a2m with 6935 sequences, total weight= 6935 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.696788 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fp2A/info/1fp2A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fp2A/nostruct-align/1fp2A.t05-thin90.a2m.gz, have 41183 columns in 180 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v9fA/nostruct-align/1v9fA.t05-thin90.a2m.gz # 1v9fA.t05-thin90.a2m with 1271 sequences, total weight= 1271 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1918 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v9fA/info/1v9fA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v9fA/nostruct-align/1v9fA.t05-thin90.a2m.gz, have 41433 columns in 181 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qwgA/nostruct-align/1qwgA.t05-thin90.a2m.gz # 1qwgA.t05-thin90.a2m with 28 sequences, total weight= 14.8188 avg weight= 0.529244 31 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qwgA/info/1qwgA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qwgA/nostruct-align/1qwgA.t05-thin90.a2m.gz, have 41684 columns in 182 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f7lA/nostruct-align/1f7lA.t05-thin90.a2m.gz # 1f7lA.t05-thin90.a2m with 340 sequences, total weight= 340 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23332 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f7lA/info/1f7lA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f7lA/nostruct-align/1f7lA.t05-thin90.a2m.gz, have 41802 columns in 183 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nbcA/nostruct-align/1nbcA.t05-thin90.a2m.gz # 1nbcA.t05-thin90.a2m with 73 sequences, total weight= 39.6383 avg weight= 0.54299 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nbcA/info/1nbcA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nbcA/nostruct-align/1nbcA.t05-thin90.a2m.gz, have 41957 columns in 184 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1my7A/nostruct-align/1my7A.t05-thin90.a2m.gz # 1my7A.t05-thin90.a2m with 67 sequences, total weight= 15.4896 avg weight= 0.231187 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1my7A/info/1my7A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1my7A/nostruct-align/1my7A.t05-thin90.a2m.gz, have 42064 columns in 185 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xu9A/nostruct-align/1xu9A.t05-thin90.a2m.gz # 1xu9A.t05-thin90.a2m with 9784 sequences, total weight= 9784 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02138 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xu9A/info/1xu9A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xu9A/nostruct-align/1xu9A.t05-thin90.a2m.gz, have 42333 columns in 186 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t6t1/nostruct-align/1t6t1.t05-thin90.a2m.gz # 1t6t1.t05-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.5933 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t6t1/info/1t6t1.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t6t1/nostruct-align/1t6t1.t05-thin90.a2m.gz, have 42441 columns in 187 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ek6A/nostruct-align/1ek6A.t05-thin90.a2m.gz # 1ek6A.t05-thin90.a2m with 10872 sequences, total weight= 10872 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.897308 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ek6A/info/1ek6A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ek6A/nostruct-align/1ek6A.t05-thin90.a2m.gz, have 42787 columns in 188 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ey4A/nostruct-align/1ey4A.t05-thin90.a2m.gz # 1ey4A.t05-thin90.a2m with 443 sequences, total weight= 443 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15065 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ey4A/info/1ey4A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ey4A/nostruct-align/1ey4A.t05-thin90.a2m.gz, have 42923 columns in 189 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gvzA/nostruct-align/1gvzA.t05-thin90.a2m.gz # 1gvzA.t05-thin90.a2m with 2929 sequences, total weight= 2929 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28737 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gvzA/info/1gvzA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gvzA/nostruct-align/1gvzA.t05-thin90.a2m.gz, have 43160 columns in 190 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gz8A/nostruct-align/1gz8A.t05-thin90.a2m.gz # 1gz8A.t05-thin90.a2m with 13031 sequences, total weight= 13031 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0621 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gz8A/info/1gz8A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gz8A/nostruct-align/1gz8A.t05-thin90.a2m.gz, have 43451 columns in 191 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ynbA/nostruct-align/1ynbA.t05-thin90.a2m.gz # 1ynbA.t05-thin90.a2m with 181 sequences, total weight= 181 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17501 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ynbA/info/1ynbA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1ynbA/nostruct-align/1ynbA.t05-thin90.a2m.gz, have 43618 columns in 192 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nytA/nostruct-align/1nytA.t05-thin90.a2m.gz # 1nytA.t05-thin90.a2m with 656 sequences, total weight= 656 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22011 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nytA/info/1nytA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nytA/nostruct-align/1nytA.t05-thin90.a2m.gz, have 43889 columns in 193 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1evlA/nostruct-align/1evlA.t05-thin90.a2m.gz # 1evlA.t05-thin90.a2m with 1688 sequences, total weight= 1688 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11651 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1evlA/info/1evlA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1evlA/nostruct-align/1evlA.t05-thin90.a2m.gz, have 44290 columns in 194 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hyoA/nostruct-align/1hyoA.t05-thin90.a2m.gz # 1hyoA.t05-thin90.a2m with 776 sequences, total weight= 408.787 avg weight= 0.526788 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30505 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hyoA/info/1hyoA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hyoA/nostruct-align/1hyoA.t05-thin90.a2m.gz, have 44706 columns in 195 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mh1/nostruct-align/1mh1.t05-thin90.a2m.gz # 1mh1.t05-thin90.a2m with 4062 sequences, total weight= 4062 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06847 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mh1/info/1mh1.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mh1/nostruct-align/1mh1.t05-thin90.a2m.gz, have 44889 columns in 196 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qw9A/nostruct-align/1qw9A.t05-thin90.a2m.gz # 1qw9A.t05-thin90.a2m with 385 sequences, total weight= 385 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.834444 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qw9A/info/1qw9A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qw9A/nostruct-align/1qw9A.t05-thin90.a2m.gz, have 45386 columns in 197 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gtkA/nostruct-align/1gtkA.t05-thin90.a2m.gz # 1gtkA.t05-thin90.a2m with 287 sequences, total weight= 22.0306 avg weight= 0.0767615 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gtkA/info/1gtkA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gtkA/nostruct-align/1gtkA.t05-thin90.a2m.gz, have 45680 columns in 198 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hbnA/nostruct-align/1hbnA.t05-thin90.a2m.gz # 1hbnA.t05-thin90.a2m with 54 sequences, total weight= 5.40939 avg weight= 0.100174 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hbnA/info/1hbnA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hbnA/nostruct-align/1hbnA.t05-thin90.a2m.gz, have 46227 columns in 199 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kqpA/nostruct-align/1kqpA.t05-thin90.a2m.gz # 1kqpA.t05-thin90.a2m with 1693 sequences, total weight= 1693 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.953497 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kqpA/info/1kqpA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kqpA/nostruct-align/1kqpA.t05-thin90.a2m.gz, have 46498 columns in 200 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mb3A/nostruct-align/1mb3A.t05-thin90.a2m.gz # 1mb3A.t05-thin90.a2m with 8997 sequences, total weight= 8997 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26694 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mb3A/info/1mb3A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mb3A/nostruct-align/1mb3A.t05-thin90.a2m.gz, have 46615 columns in 201 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vqqA/nostruct-align/1vqqA.t05-thin90.a2m.gz # 1vqqA.t05-thin90.a2m with 1328 sequences, total weight= 1328 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16084 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vqqA/info/1vqqA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vqqA/nostruct-align/1vqqA.t05-thin90.a2m.gz, have 47250 columns in 202 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p1jA/nostruct-align/1p1jA.t05-thin90.a2m.gz # 1p1jA.t05-thin90.a2m with 109 sequences, total weight= 27.6159 avg weight= 0.253357 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p1jA/info/1p1jA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p1jA/nostruct-align/1p1jA.t05-thin90.a2m.gz, have 47775 columns in 203 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/4u/4ubpB/nostruct-align/4ubpB.t05-thin90.a2m.gz # 4ubpB.t05-thin90.a2m with 127 sequences, total weight= 7.81654 avg weight= 0.0615475 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/4u/4ubpB/info/4ubpB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/4u/4ubpB/nostruct-align/4ubpB.t05-thin90.a2m.gz, have 47897 columns in 204 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vhtA/nostruct-align/1vhtA.t05-thin90.a2m.gz # 1vhtA.t05-thin90.a2m with 3695 sequences, total weight= 3695 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.814982 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vhtA/info/1vhtA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vhtA/nostruct-align/1vhtA.t05-thin90.a2m.gz, have 48105 columns in 205 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nrzA/nostruct-align/1nrzA.t05-thin90.a2m.gz # 1nrzA.t05-thin90.a2m with 121 sequences, total weight= 25.7625 avg weight= 0.212913 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nrzA/info/1nrzA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nrzA/nostruct-align/1nrzA.t05-thin90.a2m.gz, have 48268 columns in 206 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kfcA/nostruct-align/1kfcA.t05-thin90.a2m.gz # 1kfcA.t05-thin90.a2m with 460 sequences, total weight= 460 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21047 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kfcA/info/1kfcA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kfcA/nostruct-align/1kfcA.t05-thin90.a2m.gz, have 48522 columns in 207 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1ve2A/nostruct-align/1ve2A.t05-thin90.a2m.gz # 1ve2A.t05-thin90.a2m with 1173 sequences, total weight= 1173 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16009 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1ve2A/info/1ve2A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1ve2A/nostruct-align/1ve2A.t05-thin90.a2m.gz, have 48744 columns in 208 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hw1A/nostruct-align/1hw1A.t05-thin90.a2m.gz # 1hw1A.t05-thin90.a2m with 2522 sequences, total weight= 2522 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.940433 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hw1A/info/1hw1A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hw1A/nostruct-align/1hw1A.t05-thin90.a2m.gz, have 48970 columns in 209 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k4iA/nostruct-align/1k4iA.t05-thin90.a2m.gz # 1k4iA.t05-thin90.a2m with 276 sequences, total weight= 14.1887 avg weight= 0.0514082 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k4iA/info/1k4iA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k4iA/nostruct-align/1k4iA.t05-thin90.a2m.gz, have 49186 columns in 210 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w0hA/nostruct-align/1w0hA.t05-thin90.a2m.gz # 1w0hA.t05-thin90.a2m with 1129 sequences, total weight= 1129 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.990102 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w0hA/info/1w0hA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w0hA/nostruct-align/1w0hA.t05-thin90.a2m.gz, have 49386 columns in 211 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n0qA/nostruct-align/1n0qA.t05-thin90.a2m.gz # 1n0qA.t05-thin90.a2m with 8951 sequences, total weight= 8951 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23797 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n0qA/info/1n0qA.stride-mixed.o_notor2 WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1n/1n0qA/nostruct-align/1n0qA.t05-thin90.a2m.gz, have 49477 columns in 212 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1utg/nostruct-align/1utg.t05-thin90.a2m.gz # 1utg.t05-thin90.a2m with 14 sequences, total weight= 4.37471 avg weight= 0.312479 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1utg/info/1utg.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1utg/nostruct-align/1utg.t05-thin90.a2m.gz, have 49547 columns in 213 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jm1A/nostruct-align/1jm1A.t05-thin90.a2m.gz # 1jm1A.t05-thin90.a2m with 906 sequences, total weight= 906 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00965 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jm1A/info/1jm1A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jm1A/nostruct-align/1jm1A.t05-thin90.a2m.gz, have 49749 columns in 214 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fna/nostruct-align/1fna.t05-thin90.a2m.gz # 1fna.t05-thin90.a2m with 2501 sequences, total weight= 2501 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05485 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fna/info/1fna.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fna/nostruct-align/1fna.t05-thin90.a2m.gz, have 49840 columns in 215 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k7cA/nostruct-align/1k7cA.t05-thin90.a2m.gz # 1k7cA.t05-thin90.a2m with 940 sequences, total weight= 940 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.814729 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k7cA/info/1k7cA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k7cA/nostruct-align/1k7cA.t05-thin90.a2m.gz, have 50073 columns in 216 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t8kA/nostruct-align/1t8kA.t05-thin90.a2m.gz # 1t8kA.t05-thin90.a2m with 374 sequences, total weight= 38.9214 avg weight= 0.104068 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30045 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t8kA/info/1t8kA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t8kA/nostruct-align/1t8kA.t05-thin90.a2m.gz, have 50150 columns in 217 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1ml4A/nostruct-align/1ml4A.t05-thin90.a2m.gz # 1ml4A.t05-thin90.a2m with 601 sequences, total weight= 41.9735 avg weight= 0.0698394 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30033 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1ml4A/info/1ml4A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1ml4A/nostruct-align/1ml4A.t05-thin90.a2m.gz, have 50457 columns in 218 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ucsA/nostruct-align/1ucsA.t05-thin90.a2m.gz # 1ucsA.t05-thin90.a2m with 13 sequences, total weight= 3.0462 avg weight= 0.234323 11 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ucsA/info/1ucsA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ucsA/nostruct-align/1ucsA.t05-thin90.a2m.gz, have 50521 columns in 219 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eg2A/nostruct-align/1eg2A.t05-thin90.a2m.gz # 1eg2A.t05-thin90.a2m with 607 sequences, total weight= 607 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02273 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eg2A/info/1eg2A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1eg2A/nostruct-align/1eg2A.t05-thin90.a2m.gz, have 50791 columns in 220 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ymkA/nostruct-align/1ymkA.t05-thin90.a2m.gz # 1ymkA.t05-thin90.a2m with 1878 sequences, total weight= 1878 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.905641 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ymkA/info/1ymkA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1ymkA/nostruct-align/1ymkA.t05-thin90.a2m.gz, have 50962 columns in 221 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sdiA/nostruct-align/1sdiA.t05-thin90.a2m.gz # 1sdiA.t05-thin90.a2m with 36 sequences, total weight= 10.3594 avg weight= 0.28776 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sdiA/info/1sdiA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sdiA/nostruct-align/1sdiA.t05-thin90.a2m.gz, have 51175 columns in 222 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n40A/nostruct-align/1n40A.t05-thin90.a2m.gz # 1n40A.t05-thin90.a2m with 4473 sequences, total weight= 4473 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02789 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n40A/info/1n40A.stride-mixed.o_notor2 WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1n/1n40A/nostruct-align/1n40A.t05-thin90.a2m.gz, have 51569 columns in 223 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e58A/nostruct-align/1e58A.t05-thin90.a2m.gz # 1e58A.t05-thin90.a2m with 1364 sequences, total weight= 1364 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.996891 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e58A/info/1e58A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e58A/nostruct-align/1e58A.t05-thin90.a2m.gz, have 51816 columns in 224 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kq3A/nostruct-align/1kq3A.t05-thin90.a2m.gz # 1kq3A.t05-thin90.a2m with 963 sequences, total weight= 963 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15806 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kq3A/info/1kq3A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kq3A/nostruct-align/1kq3A.t05-thin90.a2m.gz, have 52180 columns in 225 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nvmA/nostruct-align/1nvmA.t05-thin90.a2m.gz # 1nvmA.t05-thin90.a2m with 856 sequences, total weight= 856 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28197 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nvmA/info/1nvmA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nvmA/nostruct-align/1nvmA.t05-thin90.a2m.gz, have 52520 columns in 226 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kugA/nostruct-align/1kugA.t05-thin90.a2m.gz # 1kugA.t05-thin90.a2m with 507 sequences, total weight= 507 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24608 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kugA/info/1kugA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kugA/nostruct-align/1kugA.t05-thin90.a2m.gz, have 52721 columns in 227 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wubA/nostruct-align/1wubA.t05-thin90.a2m.gz # 1wubA.t05-thin90.a2m with 234 sequences, total weight= 132.772 avg weight= 0.567401 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30262 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wubA/info/1wubA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wubA/nostruct-align/1wubA.t05-thin90.a2m.gz, have 52897 columns in 228 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1umgA/nostruct-align/1umgA.t05-thin90.a2m.gz # 1umgA.t05-thin90.a2m with 24 sequences, total weight= 3.97169 avg weight= 0.165487 19 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1umgA/info/1umgA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1umgA/nostruct-align/1umgA.t05-thin90.a2m.gz, have 53256 columns in 229 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gkpA/nostruct-align/1gkpA.t05-thin90.a2m.gz # 1gkpA.t05-thin90.a2m with 2223 sequences, total weight= 2223 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.915394 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gkpA/info/1gkpA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gkpA/nostruct-align/1gkpA.t05-thin90.a2m.gz, have 53714 columns in 230 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lwbA/nostruct-align/1lwbA.t05-thin90.a2m.gz # 1lwbA.t05-thin90.a2m with 18 sequences, total weight= 12.5852 avg weight= 0.699175 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lwbA/info/1lwbA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lwbA/nostruct-align/1lwbA.t05-thin90.a2m.gz, have 53836 columns in 231 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w6sA/nostruct-align/1w6sA.t05-thin90.a2m.gz # 1w6sA.t05-thin90.a2m with 1236 sequences, total weight= 1236 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.908767 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w6sA/info/1w6sA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w6sA/nostruct-align/1w6sA.t05-thin90.a2m.gz, have 54431 columns in 232 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gnlA/nostruct-align/1gnlA.t05-thin90.a2m.gz # 1gnlA.t05-thin90.a2m with 118 sequences, total weight= 43.0835 avg weight= 0.365114 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gnlA/info/1gnlA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gnlA/nostruct-align/1gnlA.t05-thin90.a2m.gz, have 54974 columns in 233 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nls/nostruct-align/1nls.t05-thin90.a2m.gz # 1nls.t05-thin90.a2m with 494 sequences, total weight= 172.555 avg weight= 0.349302 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30308 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nls/info/1nls.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nls/nostruct-align/1nls.t05-thin90.a2m.gz, have 55211 columns in 234 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wr8A/nostruct-align/1wr8A.t05-thin90.a2m.gz # 1wr8A.t05-thin90.a2m with 4479 sequences, total weight= 4479 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.86056 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wr8A/info/1wr8A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wr8A/nostruct-align/1wr8A.t05-thin90.a2m.gz, have 55441 columns in 235 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mtzA/nostruct-align/1mtzA.t05-thin90.a2m.gz # 1mtzA.t05-thin90.a2m with 7640 sequences, total weight= 7640 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.659322 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mtzA/info/1mtzA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mtzA/nostruct-align/1mtzA.t05-thin90.a2m.gz, have 55731 columns in 236 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gu2A/nostruct-align/1gu2A.t05-thin90.a2m.gz # 1gu2A.t05-thin90.a2m with 15 sequences, total weight= 8.52483 avg weight= 0.568322 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gu2A/info/1gu2A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gu2A/nostruct-align/1gu2A.t05-thin90.a2m.gz, have 55855 columns in 237 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2m/2mhr/nostruct-align/2mhr.t05-thin90.a2m.gz # 2mhr.t05-thin90.a2m with 193 sequences, total weight= 193 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24574 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2m/2mhr/info/2mhr.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2m/2mhr/nostruct-align/2mhr.t05-thin90.a2m.gz, have 55973 columns in 238 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yn9A/nostruct-align/1yn9A.t05-thin90.a2m.gz # 1yn9A.t05-thin90.a2m with 1895 sequences, total weight= 1895 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.958019 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yn9A/info/1yn9A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1yn9A/nostruct-align/1yn9A.t05-thin90.a2m.gz, have 56141 columns in 239 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wl4A/nostruct-align/1wl4A.t05-thin90.a2m.gz # 1wl4A.t05-thin90.a2m with 1742 sequences, total weight= 1742 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27965 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wl4A/info/1wl4A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wl4A/nostruct-align/1wl4A.t05-thin90.a2m.gz, have 56535 columns in 240 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uxaA/nostruct-align/1uxaA.t05-thin90.a2m.gz # 1uxaA.t05-thin90.a2m with 45 sequences, total weight= 17.1401 avg weight= 0.380892 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uxaA/info/1uxaA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uxaA/nostruct-align/1uxaA.t05-thin90.a2m.gz, have 56720 columns in 241 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xrkA/nostruct-align/1xrkA.t05-thin90.a2m.gz # 1xrkA.t05-thin90.a2m with 2390 sequences, total weight= 2390 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.92111 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xrkA/info/1xrkA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xrkA/nostruct-align/1xrkA.t05-thin90.a2m.gz, have 56840 columns in 242 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dozA/nostruct-align/1dozA.t05-thin90.a2m.gz # 1dozA.t05-thin90.a2m with 283 sequences, total weight= 109.058 avg weight= 0.385362 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30337 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dozA/info/1dozA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dozA/nostruct-align/1dozA.t05-thin90.a2m.gz, have 57149 columns in 243 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lfpA/nostruct-align/1lfpA.t05-thin90.a2m.gz # 1lfpA.t05-thin90.a2m with 256 sequences, total weight= 23.3697 avg weight= 0.0912879 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lfpA/info/1lfpA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lfpA/nostruct-align/1lfpA.t05-thin90.a2m.gz, have 57392 columns in 244 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xttA/nostruct-align/1xttA.t05-thin90.a2m.gz # 1xttA.t05-thin90.a2m with 381 sequences, total weight= 165.906 avg weight= 0.435448 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30342 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xttA/info/1xttA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xttA/nostruct-align/1xttA.t05-thin90.a2m.gz, have 57607 columns in 245 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yd0A/nostruct-align/1yd0A.t05-thin90.a2m.gz # 1yd0A.t05-thin90.a2m with 274 sequences, total weight= 23.2968 avg weight= 0.0850248 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yd0A/info/1yd0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1yd0A/nostruct-align/1yd0A.t05-thin90.a2m.gz, have 57696 columns in 246 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1syyA/nostruct-align/1syyA.t05-thin90.a2m.gz # 1syyA.t05-thin90.a2m with 353 sequences, total weight= 353 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20564 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1syyA/info/1syyA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1syyA/nostruct-align/1syyA.t05-thin90.a2m.gz, have 58013 columns in 247 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hnjA/nostruct-align/1hnjA.t05-thin90.a2m.gz # 1hnjA.t05-thin90.a2m with 3833 sequences, total weight= 3833 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07678 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hnjA/info/1hnjA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hnjA/nostruct-align/1hnjA.t05-thin90.a2m.gz, have 58330 columns in 248 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r7jA/nostruct-align/1r7jA.t05-thin90.a2m.gz # 1r7jA.t05-thin90.a2m with 29 sequences, total weight= 24.098 avg weight= 0.830966 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r7jA/info/1r7jA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r7jA/nostruct-align/1r7jA.t05-thin90.a2m.gz, have 58420 columns in 249 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jfbA/nostruct-align/1jfbA.t05-thin90.a2m.gz # 1jfbA.t05-thin90.a2m with 4492 sequences, total weight= 4492 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01106 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jfbA/info/1jfbA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jfbA/nostruct-align/1jfbA.t05-thin90.a2m.gz, have 58819 columns in 250 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o7iA/nostruct-align/1o7iA.t05-thin90.a2m.gz # 1o7iA.t05-thin90.a2m with 128 sequences, total weight= 128 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21787 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o7iA/info/1o7iA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o7iA/nostruct-align/1o7iA.t05-thin90.a2m.gz, have 58934 columns in 251 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j1yA/nostruct-align/1j1yA.t05-thin90.a2m.gz # 1j1yA.t05-thin90.a2m with 1062 sequences, total weight= 1062 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00389 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j1yA/info/1j1yA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j1yA/nostruct-align/1j1yA.t05-thin90.a2m.gz, have 59050 columns in 252 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oz2A/nostruct-align/1oz2A.t05-thin90.a2m.gz # 1oz2A.t05-thin90.a2m with 129 sequences, total weight= 47.7737 avg weight= 0.370339 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oz2A/info/1oz2A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oz2A/nostruct-align/1oz2A.t05-thin90.a2m.gz, have 59374 columns in 253 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f8eA/nostruct-align/1f8eA.t05-thin90.a2m.gz # 1f8eA.t05-thin90.a2m with 67 sequences, total weight= 5.94595 avg weight= 0.0887455 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f8eA/info/1f8eA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f8eA/nostruct-align/1f8eA.t05-thin90.a2m.gz, have 59762 columns in 254 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xpcA/nostruct-align/1xpcA.t05-thin90.a2m.gz # 1xpcA.t05-thin90.a2m with 1030 sequences, total weight= 1030 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.931283 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xpcA/info/1xpcA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xpcA/nostruct-align/1xpcA.t05-thin90.a2m.gz, have 60007 columns in 255 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vr8A/nostruct-align/1vr8A.t05-thin90.a2m.gz # 1vr8A.t05-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.595407 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vr8A/info/1vr8A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vr8A/nostruct-align/1vr8A.t05-thin90.a2m.gz, have 60142 columns in 256 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kzqA/nostruct-align/1kzqA.t05-thin90.a2m.gz # 1kzqA.t05-thin90.a2m with 31 sequences, total weight= 26.1359 avg weight= 0.843094 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kzqA/info/1kzqA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kzqA/nostruct-align/1kzqA.t05-thin90.a2m.gz, have 60395 columns in 257 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t9hA/nostruct-align/1t9hA.t05-thin90.a2m.gz # 1t9hA.t05-thin90.a2m with 2444 sequences, total weight= 2444 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04193 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t9hA/info/1t9hA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t9hA/nostruct-align/1t9hA.t05-thin90.a2m.gz, have 60682 columns in 258 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yxyA/nostruct-align/1yxyA.t05-thin90.a2m.gz # 1yxyA.t05-thin90.a2m with 2786 sequences, total weight= 2786 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.993563 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yxyA/info/1yxyA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1yxyA/nostruct-align/1yxyA.t05-thin90.a2m.gz, have 60912 columns in 259 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m1nB/nostruct-align/1m1nB.t05-thin90.a2m.gz # 1m1nB.t05-thin90.a2m with 525 sequences, total weight= 525 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23745 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m1nB/info/1m1nB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m1nB/nostruct-align/1m1nB.t05-thin90.a2m.gz, have 61434 columns in 260 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qw2A/nostruct-align/1qw2A.t05-thin90.a2m.gz # 1qw2A.t05-thin90.a2m with 17 sequences, total weight= 6.72372 avg weight= 0.395513 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qw2A/info/1qw2A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qw2A/nostruct-align/1qw2A.t05-thin90.a2m.gz, have 61536 columns in 261 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ufoA/nostruct-align/1ufoA.t05-thin90.a2m.gz # 1ufoA.t05-thin90.a2m with 10895 sequences, total weight= 10895 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.705532 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ufoA/info/1ufoA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ufoA/nostruct-align/1ufoA.t05-thin90.a2m.gz, have 61774 columns in 262 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vkfA/nostruct-align/1vkfA.t05-thin90.a2m.gz # 1vkfA.t05-thin90.a2m with 30 sequences, total weight= 9.28543 avg weight= 0.309514 31 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vkfA/info/1vkfA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vkfA/nostruct-align/1vkfA.t05-thin90.a2m.gz, have 61946 columns in 263 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nszA/nostruct-align/1nszA.t05-thin90.a2m.gz # 1nszA.t05-thin90.a2m with 436 sequences, total weight= 436 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12534 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nszA/info/1nszA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nszA/nostruct-align/1nszA.t05-thin90.a2m.gz, have 62286 columns in 264 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dd9A/nostruct-align/1dd9A.t05-thin90.a2m.gz # 1dd9A.t05-thin90.a2m with 481 sequences, total weight= 481 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04993 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dd9A/info/1dd9A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dd9A/nostruct-align/1dd9A.t05-thin90.a2m.gz, have 62596 columns in 265 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iuaA/nostruct-align/1iuaA.t05-thin90.a2m.gz # 1iuaA.t05-thin90.a2m with 37 sequences, total weight= 14.0521 avg weight= 0.379787 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iuaA/info/1iuaA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iuaA/nostruct-align/1iuaA.t05-thin90.a2m.gz, have 62679 columns in 266 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lqtA/nostruct-align/1lqtA.t05-thin90.a2m.gz # 1lqtA.t05-thin90.a2m with 8070 sequences, total weight= 8070 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.806846 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lqtA/info/1lqtA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lqtA/nostruct-align/1lqtA.t05-thin90.a2m.gz, have 63131 columns in 267 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mml/nostruct-align/1mml.t05-thin90.a2m.gz # 1mml.t05-thin90.a2m with 310 sequences, total weight= 4.87894 avg weight= 0.0157385 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mml/info/1mml.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mml/nostruct-align/1mml.t05-thin90.a2m.gz, have 63382 columns in 268 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y93A/nostruct-align/1y93A.t05-thin90.a2m.gz # 1y93A.t05-thin90.a2m with 458 sequences, total weight= 458 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21546 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y93A/info/1y93A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1y93A/nostruct-align/1y93A.t05-thin90.a2m.gz, have 63540 columns in 269 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i2kA/nostruct-align/1i2kA.t05-thin90.a2m.gz # 1i2kA.t05-thin90.a2m with 654 sequences, total weight= 654 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2046 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i2kA/info/1i2kA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i2kA/nostruct-align/1i2kA.t05-thin90.a2m.gz, have 63809 columns in 270 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x6zA/nostruct-align/1x6zA.t05-thin90.a2m.gz # 1x6zA.t05-thin90.a2m with 191 sequences, total weight= 68.1755 avg weight= 0.35694 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30031 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x6zA/info/1x6zA.stride-mixed.o_notor2 WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1x/1x6zA/nostruct-align/1x6zA.t05-thin90.a2m.gz, have 63928 columns in 271 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wwzA/nostruct-align/1wwzA.t05-thin90.a2m.gz # 1wwzA.t05-thin90.a2m with 5914 sequences, total weight= 5914 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.724336 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wwzA/info/1wwzA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wwzA/nostruct-align/1wwzA.t05-thin90.a2m.gz, have 64085 columns in 272 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1amf/nostruct-align/1amf.t05-thin90.a2m.gz # 1amf.t05-thin90.a2m with 2095 sequences, total weight= 2095 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.870156 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1amf/info/1amf.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1amf/nostruct-align/1amf.t05-thin90.a2m.gz, have 64316 columns in 273 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nogA/nostruct-align/1nogA.t05-thin90.a2m.gz # 1nogA.t05-thin90.a2m with 145 sequences, total weight= 20.1488 avg weight= 0.138957 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nogA/info/1nogA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nogA/nostruct-align/1nogA.t05-thin90.a2m.gz, have 64465 columns in 274 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kid/nostruct-align/1kid.t05-thin90.a2m.gz # 1kid.t05-thin90.a2m with 526 sequences, total weight= 18.8774 avg weight= 0.0358886 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kid/info/1kid.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kid/nostruct-align/1kid.t05-thin90.a2m.gz, have 64658 columns in 275 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ryqA/nostruct-align/1ryqA.t05-thin90.a2m.gz # 1ryqA.t05-thin90.a2m with 54 sequences, total weight= 13.0291 avg weight= 0.24128 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ryqA/info/1ryqA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1ryqA/nostruct-align/1ryqA.t05-thin90.a2m.gz, have 64722 columns in 276 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n4wA/nostruct-align/1n4wA.t05-thin90.a2m.gz # 1n4wA.t05-thin90.a2m with 6209 sequences, total weight= 6209 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.88381 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n4wA/info/1n4wA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n4wA/nostruct-align/1n4wA.t05-thin90.a2m.gz, have 65220 columns in 277 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e7lA/nostruct-align/1e7lA.t05-thin90.a2m.gz # 1e7lA.t05-thin90.a2m with 15 sequences, total weight= 9.65103 avg weight= 0.643402 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e7lA/info/1e7lA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e7lA/nostruct-align/1e7lA.t05-thin90.a2m.gz, have 65377 columns in 278 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jyeA/nostruct-align/1jyeA.t05-thin90.a2m.gz # 1jyeA.t05-thin90.a2m with 1943 sequences, total weight= 1943 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.996612 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jyeA/info/1jyeA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jyeA/nostruct-align/1jyeA.t05-thin90.a2m.gz, have 65648 columns in 279 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g66A/nostruct-align/1g66A.t05-thin90.a2m.gz # 1g66A.t05-thin90.a2m with 175 sequences, total weight= 175 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14396 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g66A/info/1g66A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g66A/nostruct-align/1g66A.t05-thin90.a2m.gz, have 65855 columns in 280 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/19/19hcA/nostruct-align/19hcA.t05-thin90.a2m.gz # 19hcA.t05-thin90.a2m with 646 sequences, total weight= 646 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.834813 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/19/19hcA/info/19hcA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/19/19hcA/nostruct-align/19hcA.t05-thin90.a2m.gz, have 66147 columns in 281 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bebA/nostruct-align/1bebA.t05-thin90.a2m.gz # 1bebA.t05-thin90.a2m with 433 sequences, total weight= 433 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00479 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bebA/info/1bebA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bebA/nostruct-align/1bebA.t05-thin90.a2m.gz, have 66303 columns in 282 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ii5A/nostruct-align/1ii5A.t05-thin90.a2m.gz # 1ii5A.t05-thin90.a2m with 2189 sequences, total weight= 2189 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.948397 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ii5A/info/1ii5A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ii5A/nostruct-align/1ii5A.t05-thin90.a2m.gz, have 66524 columns in 283 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wmzA/nostruct-align/1wmzA.t05-thin90.a2m.gz # 1wmzA.t05-thin90.a2m with 2126 sequences, total weight= 2126 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.996552 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wmzA/info/1wmzA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wmzA/nostruct-align/1wmzA.t05-thin90.a2m.gz, have 66664 columns in 284 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oafA/nostruct-align/1oafA.t05-thin90.a2m.gz # 1oafA.t05-thin90.a2m with 849 sequences, total weight= 70.4629 avg weight= 0.0829952 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30258 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oafA/info/1oafA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oafA/nostruct-align/1oafA.t05-thin90.a2m.gz, have 66914 columns in 285 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i0rA/nostruct-align/1i0rA.t05-thin90.a2m.gz # 1i0rA.t05-thin90.a2m with 531 sequences, total weight= 531 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20796 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i0rA/info/1i0rA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i0rA/nostruct-align/1i0rA.t05-thin90.a2m.gz, have 67075 columns in 286 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yocA/nostruct-align/1yocA.t05-thin90.a2m.gz # 1yocA.t05-thin90.a2m with 655 sequences, total weight= 655 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0174 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yocA/info/1yocA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1yocA/nostruct-align/1yocA.t05-thin90.a2m.gz, have 67220 columns in 287 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nbuA/nostruct-align/1nbuA.t05-thin90.a2m.gz # 1nbuA.t05-thin90.a2m with 247 sequences, total weight= 136.328 avg weight= 0.551936 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30408 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nbuA/info/1nbuA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nbuA/nostruct-align/1nbuA.t05-thin90.a2m.gz, have 67338 columns in 288 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d02A/nostruct-align/1d02A.t05-thin90.a2m.gz # 1d02A.t05-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.615068 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d02A/info/1d02A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d02A/nostruct-align/1d02A.t05-thin90.a2m.gz, have 67535 columns in 289 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vl1A/nostruct-align/1vl1A.t05-thin90.a2m.gz # 1vl1A.t05-thin90.a2m with 384 sequences, total weight= 116.675 avg weight= 0.30384 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30331 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vl1A/info/1vl1A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vl1A/nostruct-align/1vl1A.t05-thin90.a2m.gz, have 67753 columns in 290 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cqmA/nostruct-align/1cqmA.t05-thin90.a2m.gz # 1cqmA.t05-thin90.a2m with 230 sequences, total weight= 87.7839 avg weight= 0.381669 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30236 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cqmA/info/1cqmA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cqmA/nostruct-align/1cqmA.t05-thin90.a2m.gz, have 67851 columns in 291 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1io7A/nostruct-align/1io7A.t05-thin90.a2m.gz # 1io7A.t05-thin90.a2m with 4414 sequences, total weight= 4414 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02574 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1io7A/info/1io7A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1io7A/nostruct-align/1io7A.t05-thin90.a2m.gz, have 68217 columns in 292 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uwwA/nostruct-align/1uwwA.t05-thin90.a2m.gz # 1uwwA.t05-thin90.a2m with 22 sequences, total weight= 12.9557 avg weight= 0.588896 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uwwA/info/1uwwA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uwwA/nostruct-align/1uwwA.t05-thin90.a2m.gz, have 68401 columns in 293 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iktA/nostruct-align/1iktA.t05-thin90.a2m.gz # 1iktA.t05-thin90.a2m with 150 sequences, total weight= 148.878 avg weight= 0.992523 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iktA/info/1iktA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iktA/nostruct-align/1iktA.t05-thin90.a2m.gz, have 68516 columns in 294 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yqhA/nostruct-align/1yqhA.t05-thin90.a2m.gz # 1yqhA.t05-thin90.a2m with 98 sequences, total weight= 37.6421 avg weight= 0.384103 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yqhA/info/1yqhA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1yqhA/nostruct-align/1yqhA.t05-thin90.a2m.gz, have 68620 columns in 295 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j8rA/nostruct-align/1j8rA.t05-thin90.a2m.gz # 1j8rA.t05-thin90.a2m with 5 sequences, total weight= 3.50232 avg weight= 0.700465 13 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j8rA/info/1j8rA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j8rA/nostruct-align/1j8rA.t05-thin90.a2m.gz, have 68816 columns in 296 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gweA/nostruct-align/1gweA.t05-thin90.a2m.gz # 1gweA.t05-thin90.a2m with 457 sequences, total weight= 55.3366 avg weight= 0.121087 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gweA/info/1gweA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gweA/nostruct-align/1gweA.t05-thin90.a2m.gz, have 69314 columns in 297 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ispA/nostruct-align/1ispA.t05-thin90.a2m.gz # 1ispA.t05-thin90.a2m with 7701 sequences, total weight= 7701 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.591737 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ispA/info/1ispA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ispA/nostruct-align/1ispA.t05-thin90.a2m.gz, have 69493 columns in 298 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nrvA/nostruct-align/1nrvA.t05-thin90.a2m.gz # 1nrvA.t05-thin90.a2m with 791 sequences, total weight= 617.556 avg weight= 0.780729 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30415 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nrvA/info/1nrvA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nrvA/nostruct-align/1nrvA.t05-thin90.a2m.gz, have 69593 columns in 299 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cs1A/nostruct-align/1cs1A.t05-thin90.a2m.gz # 1cs1A.t05-thin90.a2m with 6839 sequences, total weight= 6839 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.9139 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cs1A/info/1cs1A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cs1A/nostruct-align/1cs1A.t05-thin90.a2m.gz, have 69977 columns in 300 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bdmA/nostruct-align/1bdmA.t05-thin90.a2m.gz # 1bdmA.t05-thin90.a2m with 1828 sequences, total weight= 1828 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.056 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bdmA/info/1bdmA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bdmA/nostruct-align/1bdmA.t05-thin90.a2m.gz, have 70294 columns in 301 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lc5A/nostruct-align/1lc5A.t05-thin90.a2m.gz # 1lc5A.t05-thin90.a2m with 5753 sequences, total weight= 5753 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.908646 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lc5A/info/1lc5A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lc5A/nostruct-align/1lc5A.t05-thin90.a2m.gz, have 70649 columns in 302 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w2fA/nostruct-align/1w2fA.t05-thin90.a2m.gz # 1w2fA.t05-thin90.a2m with 164 sequences, total weight= 164 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29012 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w2fA/info/1w2fA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w2fA/nostruct-align/1w2fA.t05-thin90.a2m.gz, have 70925 columns in 303 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1je0A/nostruct-align/1je0A.t05-thin90.a2m.gz # 1je0A.t05-thin90.a2m with 863 sequences, total weight= 863 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03319 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1je0A/info/1je0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1je0A/nostruct-align/1je0A.t05-thin90.a2m.gz, have 71151 columns in 304 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iab/nostruct-align/1iab.t05-thin90.a2m.gz # 1iab.t05-thin90.a2m with 410 sequences, total weight= 280.65 avg weight= 0.684513 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30414 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iab/info/1iab.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iab/nostruct-align/1iab.t05-thin90.a2m.gz, have 71351 columns in 305 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gnyA/nostruct-align/1gnyA.t05-thin90.a2m.gz # 1gnyA.t05-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13668 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gnyA/info/1gnyA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gnyA/nostruct-align/1gnyA.t05-thin90.a2m.gz, have 71504 columns in 306 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y9iA/nostruct-align/1y9iA.t05-thin90.a2m.gz # 1y9iA.t05-thin90.a2m with 134 sequences, total weight= 77.0855 avg weight= 0.575265 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30035 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y9iA/info/1y9iA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1y9iA/nostruct-align/1y9iA.t05-thin90.a2m.gz, have 71663 columns in 307 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1na3A/nostruct-align/1na3A.t05-thin90.a2m.gz # 1na3A.t05-thin90.a2m with 6519 sequences, total weight= 6519 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.948005 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1na3A/info/1na3A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1na3A/nostruct-align/1na3A.t05-thin90.a2m.gz, have 71749 columns in 308 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m6sA/nostruct-align/1m6sA.t05-thin90.a2m.gz # 1m6sA.t05-thin90.a2m with 8746 sequences, total weight= 8746 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.883503 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m6sA/info/1m6sA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m6sA/nostruct-align/1m6sA.t05-thin90.a2m.gz, have 72092 columns in 309 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lb6A/nostruct-align/1lb6A.t05-thin90.a2m.gz # 1lb6A.t05-thin90.a2m with 147 sequences, total weight= 110.316 avg weight= 0.750448 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30083 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lb6A/info/1lb6A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lb6A/nostruct-align/1lb6A.t05-thin90.a2m.gz, have 72247 columns in 310 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1ga6A/nostruct-align/1ga6A.t05-thin90.a2m.gz # 1ga6A.t05-thin90.a2m with 1351 sequences, total weight= 1351 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09775 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1ga6A/info/1ga6A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1ga6A/nostruct-align/1ga6A.t05-thin90.a2m.gz, have 72616 columns in 311 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1agjA/nostruct-align/1agjA.t05-thin90.a2m.gz # 1agjA.t05-thin90.a2m with 4052 sequences, total weight= 4052 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05802 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1agjA/info/1agjA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1agjA/nostruct-align/1agjA.t05-thin90.a2m.gz, have 72858 columns in 312 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g4yB/nostruct-align/1g4yB.t05-thin90.a2m.gz # 1g4yB.t05-thin90.a2m with 26 sequences, total weight= 5.8788 avg weight= 0.226108 19 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g4yB/info/1g4yB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g4yB/nostruct-align/1g4yB.t05-thin90.a2m.gz, have 72939 columns in 313 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tzpA/nostruct-align/1tzpA.t05-thin90.a2m.gz # 1tzpA.t05-thin90.a2m with 32 sequences, total weight= 9.99296 avg weight= 0.31228 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tzpA/info/1tzpA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tzpA/nostruct-align/1tzpA.t05-thin90.a2m.gz, have 73179 columns in 314 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vie/nostruct-align/1vie.t05-thin90.a2m.gz # 1vie.t05-thin90.a2m with 3 sequences, total weight= 1.86591 avg weight= 0.621969 10 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vie/info/1vie.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vie/nostruct-align/1vie.t05-thin90.a2m.gz, have 73239 columns in 315 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dk0A/nostruct-align/1dk0A.t05-thin90.a2m.gz # 1dk0A.t05-thin90.a2m with 6 sequences, total weight= 3.75442 avg weight= 0.625737 15 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dk0A/info/1dk0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dk0A/nostruct-align/1dk0A.t05-thin90.a2m.gz, have 73412 columns in 316 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l8rA/nostruct-align/1l8rA.t05-thin90.a2m.gz # 1l8rA.t05-thin90.a2m with 19 sequences, total weight= 3.37883 avg weight= 0.177833 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l8rA/info/1l8rA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1l8rA/nostruct-align/1l8rA.t05-thin90.a2m.gz, have 73513 columns in 317 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h7cA/nostruct-align/1h7cA.t05-thin90.a2m.gz # 1h7cA.t05-thin90.a2m with 44 sequences, total weight= 22.9872 avg weight= 0.522437 37 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h7cA/info/1h7cA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h7cA/nostruct-align/1h7cA.t05-thin90.a2m.gz, have 73616 columns in 318 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kveB/nostruct-align/1kveB.t05-thin90.a2m.gz # 1kveB.t05-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04665 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kveB/info/1kveB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kveB/nostruct-align/1kveB.t05-thin90.a2m.gz, have 73693 columns in 319 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1elwA/nostruct-align/1elwA.t05-thin90.a2m.gz # 1elwA.t05-thin90.a2m with 7177 sequences, total weight= 7177 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.911396 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1elwA/info/1elwA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1elwA/nostruct-align/1elwA.t05-thin90.a2m.gz, have 73810 columns in 320 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1aho/nostruct-align/1aho.t05-thin90.a2m.gz # 1aho.t05-thin90.a2m with 121 sequences, total weight= 12.2227 avg weight= 0.101014 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1aho/info/1aho.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1aho/nostruct-align/1aho.t05-thin90.a2m.gz, have 73874 columns in 321 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tvxA/nostruct-align/1tvxA.t05-thin90.a2m.gz # 1tvxA.t05-thin90.a2m with 229 sequences, total weight= 40.3522 avg weight= 0.17621 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30056 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tvxA/info/1tvxA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tvxA/nostruct-align/1tvxA.t05-thin90.a2m.gz, have 73938 columns in 322 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rk6A/nostruct-align/1rk6A.t05-thin90.a2m.gz # 1rk6A.t05-thin90.a2m with 2139 sequences, total weight= 2139 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.88962 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rk6A/info/1rk6A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rk6A/nostruct-align/1rk6A.t05-thin90.a2m.gz, have 74412 columns in 323 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w0pA/nostruct-align/1w0pA.t05-thin90.a2m.gz # 1w0pA.t05-thin90.a2m with 952 sequences, total weight= 274.853 avg weight= 0.288711 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30196 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w0pA/info/1w0pA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w0pA/nostruct-align/1w0pA.t05-thin90.a2m.gz, have 75165 columns in 324 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o9iA/nostruct-align/1o9iA.t05-thin90.a2m.gz # 1o9iA.t05-thin90.a2m with 64 sequences, total weight= 16.9984 avg weight= 0.265599 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o9iA/info/1o9iA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o9iA/nostruct-align/1o9iA.t05-thin90.a2m.gz, have 75431 columns in 325 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jboA/nostruct-align/1jboA.t05-thin90.a2m.gz # 1jboA.t05-thin90.a2m with 268 sequences, total weight= 33.4519 avg weight= 0.12482 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jboA/info/1jboA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jboA/nostruct-align/1jboA.t05-thin90.a2m.gz, have 75593 columns in 326 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jz8A/nostruct-align/1jz8A.t05-thin90.a2m.gz # 1jz8A.t05-thin90.a2m with 649 sequences, total weight= 649 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12016 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jz8A/info/1jz8A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jz8A/nostruct-align/1jz8A.t05-thin90.a2m.gz, have 76604 columns in 327 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lkkA/nostruct-align/1lkkA.t05-thin90.a2m.gz # 1lkkA.t05-thin90.a2m with 824 sequences, total weight= 824 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26656 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lkkA/info/1lkkA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lkkA/nostruct-align/1lkkA.t05-thin90.a2m.gz, have 76709 columns in 328 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j83A/nostruct-align/1j83A.t05-thin90.a2m.gz # 1j83A.t05-thin90.a2m with 19 sequences, total weight= 7.04349 avg weight= 0.37071 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j83A/info/1j83A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j83A/nostruct-align/1j83A.t05-thin90.a2m.gz, have 76889 columns in 329 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n7oA/nostruct-align/1n7oA.t05-thin90.a2m.gz # 1n7oA.t05-thin90.a2m with 73 sequences, total weight= 73 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15662 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n7oA/info/1n7oA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n7oA/nostruct-align/1n7oA.t05-thin90.a2m.gz, have 77610 columns in 330 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kqfA/nostruct-align/1kqfA.t05-thin90.a2m.gz # 1kqfA.t05-thin90.a2m with 1111 sequences, total weight= 1111 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13432 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kqfA/info/1kqfA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kqfA/nostruct-align/1kqfA.t05-thin90.a2m.gz, have 78592 columns in 331 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mtyB/nostruct-align/1mtyB.t05-thin90.a2m.gz # 1mtyB.t05-thin90.a2m with 129 sequences, total weight= 105.461 avg weight= 0.817529 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mtyB/info/1mtyB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mtyB/nostruct-align/1mtyB.t05-thin90.a2m.gz, have 78976 columns in 332 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jtgB/nostruct-align/1jtgB.t05-thin90.a2m.gz # 1jtgB.t05-thin90.a2m with 4 sequences, total weight= 4 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1647 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jtgB/info/1jtgB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jtgB/nostruct-align/1jtgB.t05-thin90.a2m.gz, have 79141 columns in 333 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q4uA/nostruct-align/1q4uA.t05-thin90.a2m.gz # 1q4uA.t05-thin90.a2m with 989 sequences, total weight= 989 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.953386 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q4uA/info/1q4uA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q4uA/nostruct-align/1q4uA.t05-thin90.a2m.gz, have 79281 columns in 334 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ujpA/nostruct-align/1ujpA.t05-thin90.a2m.gz # 1ujpA.t05-thin90.a2m with 362 sequences, total weight= 321.735 avg weight= 0.88877 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30149 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ujpA/info/1ujpA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ujpA/nostruct-align/1ujpA.t05-thin90.a2m.gz, have 79524 columns in 335 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h70A/nostruct-align/1h70A.t05-thin90.a2m.gz # 1h70A.t05-thin90.a2m with 334 sequences, total weight= 334 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1268 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h70A/info/1h70A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h70A/nostruct-align/1h70A.t05-thin90.a2m.gz, have 79779 columns in 336 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nkd/nostruct-align/1nkd.t05-thin90.a2m.gz # 1nkd.t05-thin90.a2m with 18 sequences, total weight= 4.33675 avg weight= 0.24093 15 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nkd/info/1nkd.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nkd/nostruct-align/1nkd.t05-thin90.a2m.gz, have 79838 columns in 337 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xdzA/nostruct-align/1xdzA.t05-thin90.a2m.gz # 1xdzA.t05-thin90.a2m with 9606 sequences, total weight= 9606 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.690324 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xdzA/info/1xdzA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xdzA/nostruct-align/1xdzA.t05-thin90.a2m.gz, have 80076 columns in 338 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iv3A/nostruct-align/1iv3A.t05-thin90.a2m.gz # 1iv3A.t05-thin90.a2m with 196 sequences, total weight= 10.0542 avg weight= 0.0512971 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iv3A/info/1iv3A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iv3A/nostruct-align/1iv3A.t05-thin90.a2m.gz, have 80226 columns in 339 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jatB/nostruct-align/1jatB.t05-thin90.a2m.gz # 1jatB.t05-thin90.a2m with 885 sequences, total weight= 206.424 avg weight= 0.233247 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31394 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jatB/info/1jatB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jatB/nostruct-align/1jatB.t05-thin90.a2m.gz, have 80358 columns in 340 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xfiA/nostruct-align/1xfiA.t05-thin90.a2m.gz # 1xfiA.t05-thin90.a2m with 114 sequences, total weight= 114 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20136 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xfiA/info/1xfiA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xfiA/nostruct-align/1xfiA.t05-thin90.a2m.gz, have 80701 columns in 341 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1plc/nostruct-align/1plc.t05-thin90.a2m.gz # 1plc.t05-thin90.a2m with 301 sequences, total weight= 301 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21528 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1plc/info/1plc.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1plc/nostruct-align/1plc.t05-thin90.a2m.gz, have 80800 columns in 342 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jf8A/nostruct-align/1jf8A.t05-thin90.a2m.gz # 1jf8A.t05-thin90.a2m with 523 sequences, total weight= 216.838 avg weight= 0.414603 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31003 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jf8A/info/1jf8A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jf8A/nostruct-align/1jf8A.t05-thin90.a2m.gz, have 80930 columns in 343 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1odmA/nostruct-align/1odmA.t05-thin90.a2m.gz # 1odmA.t05-thin90.a2m with 808 sequences, total weight= 808 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22781 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1odmA/info/1odmA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1odmA/nostruct-align/1odmA.t05-thin90.a2m.gz, have 81259 columns in 344 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ew4A/nostruct-align/1ew4A.t05-thin90.a2m.gz # 1ew4A.t05-thin90.a2m with 94 sequences, total weight= 24.3083 avg weight= 0.258599 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ew4A/info/1ew4A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ew4A/nostruct-align/1ew4A.t05-thin90.a2m.gz, have 81365 columns in 345 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gutA/nostruct-align/1gutA.t05-thin90.a2m.gz # 1gutA.t05-thin90.a2m with 198 sequences, total weight= 21.0065 avg weight= 0.106093 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gutA/info/1gutA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gutA/nostruct-align/1gutA.t05-thin90.a2m.gz, have 81432 columns in 346 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wz8A/nostruct-align/1wz8A.t05-thin90.a2m.gz # 1wz8A.t05-thin90.a2m with 2115 sequences, total weight= 2115 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16611 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wz8A/info/1wz8A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wz8A/nostruct-align/1wz8A.t05-thin90.a2m.gz, have 81695 columns in 347 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mxrA/nostruct-align/1mxrA.t05-thin90.a2m.gz # 1mxrA.t05-thin90.a2m with 350 sequences, total weight= 350 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22181 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mxrA/info/1mxrA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mxrA/nostruct-align/1mxrA.t05-thin90.a2m.gz, have 82034 columns in 348 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n6aA/nostruct-align/1n6aA.t05-thin90.a2m.gz # 1n6aA.t05-thin90.a2m with 477 sequences, total weight= 477 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0462 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n6aA/info/1n6aA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n6aA/nostruct-align/1n6aA.t05-thin90.a2m.gz, have 82268 columns in 349 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ecsA/nostruct-align/1ecsA.t05-thin90.a2m.gz # 1ecsA.t05-thin90.a2m with 2166 sequences, total weight= 2166 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.905963 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ecsA/info/1ecsA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ecsA/nostruct-align/1ecsA.t05-thin90.a2m.gz, have 82388 columns in 350 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1of8A/nostruct-align/1of8A.t05-thin90.a2m.gz # 1of8A.t05-thin90.a2m with 430 sequences, total weight= 38.2898 avg weight= 0.089046 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1of8A/info/1of8A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1of8A/nostruct-align/1of8A.t05-thin90.a2m.gz, have 82727 columns in 351 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f7dA/nostruct-align/1f7dA.t05-thin90.a2m.gz # 1f7dA.t05-thin90.a2m with 577 sequences, total weight= 577 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26418 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f7dA/info/1f7dA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f7dA/nostruct-align/1f7dA.t05-thin90.a2m.gz, have 82845 columns in 352 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lk9A/nostruct-align/1lk9A.t05-thin90.a2m.gz # 1lk9A.t05-thin90.a2m with 4739 sequences, total weight= 4739 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.928064 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lk9A/info/1lk9A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lk9A/nostruct-align/1lk9A.t05-thin90.a2m.gz, have 83270 columns in 353 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pmhX/nostruct-align/1pmhX.t05-thin90.a2m.gz # 1pmhX.t05-thin90.a2m with 6 sequences, total weight= 6 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23677 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pmhX/info/1pmhX.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pmhX/nostruct-align/1pmhX.t05-thin90.a2m.gz, have 83453 columns in 354 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yv4A/nostruct-align/1yv4A.t05-thin90.a2m.gz # 1yv4A.t05-thin90.a2m with 197 sequences, total weight= 33.9618 avg weight= 0.172395 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yv4A/info/1yv4A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1yv4A/nostruct-align/1yv4A.t05-thin90.a2m.gz, have 83557 columns in 355 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qz5A/nostruct-align/1qz5A.t05-thin90.a2m.gz # 1qz5A.t05-thin90.a2m with 836 sequences, total weight= 304.179 avg weight= 0.36385 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31282 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qz5A/info/1qz5A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qz5A/nostruct-align/1qz5A.t05-thin90.a2m.gz, have 83916 columns in 356 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h99A/nostruct-align/1h99A.t05-thin90.a2m.gz # 1h99A.t05-thin90.a2m with 248 sequences, total weight= 248 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00787 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h99A/info/1h99A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h99A/nostruct-align/1h99A.t05-thin90.a2m.gz, have 84136 columns in 357 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c9oA/nostruct-align/1c9oA.t05-thin90.a2m.gz # 1c9oA.t05-thin90.a2m with 644 sequences, total weight= 27.3034 avg weight= 0.0423965 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c9oA/info/1c9oA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1c9oA/nostruct-align/1c9oA.t05-thin90.a2m.gz, have 84202 columns in 358 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yx1A/nostruct-align/1yx1A.t05-thin90.a2m.gz # 1yx1A.t05-thin90.a2m with 978 sequences, total weight= 978 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.901332 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yx1A/info/1yx1A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1yx1A/nostruct-align/1yx1A.t05-thin90.a2m.gz, have 84452 columns in 359 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yy6A/nostruct-align/1yy6A.t05-thin90.a2m.gz # 1yy6A.t05-thin90.a2m with 622 sequences, total weight= 622 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05431 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yy6A/info/1yy6A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1yy6A/nostruct-align/1yy6A.t05-thin90.a2m.gz, have 84589 columns in 360 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iq6A/nostruct-align/1iq6A.t05-thin90.a2m.gz # 1iq6A.t05-thin90.a2m with 840 sequences, total weight= 840 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09035 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iq6A/info/1iq6A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iq6A/nostruct-align/1iq6A.t05-thin90.a2m.gz, have 84721 columns in 361 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pwxA/nostruct-align/1pwxA.t05-thin90.a2m.gz # 1pwxA.t05-thin90.a2m with 9016 sequences, total weight= 9016 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11478 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pwxA/info/1pwxA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pwxA/nostruct-align/1pwxA.t05-thin90.a2m.gz, have 84973 columns in 362 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x7yA/nostruct-align/1x7yA.t05-thin90.a2m.gz # 1x7yA.t05-thin90.a2m with 1650 sequences, total weight= 1650 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04764 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x7yA/info/1x7yA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1x7yA/nostruct-align/1x7yA.t05-thin90.a2m.gz, have 85342 columns in 363 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rzhH/nostruct-align/1rzhH.t05-thin90.a2m.gz # 1rzhH.t05-thin90.a2m with 16 sequences, total weight= 5.08048 avg weight= 0.31753 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rzhH/info/1rzhH.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rzhH/nostruct-align/1rzhH.t05-thin90.a2m.gz, have 85580 columns in 364 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1es9A/nostruct-align/1es9A.t05-thin90.a2m.gz # 1es9A.t05-thin90.a2m with 1259 sequences, total weight= 1259 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.786131 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1es9A/info/1es9A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1es9A/nostruct-align/1es9A.t05-thin90.a2m.gz, have 85792 columns in 365 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1ja1A/nostruct-align/1ja1A.t05-thin90.a2m.gz # 1ja1A.t05-thin90.a2m with 1827 sequences, total weight= 1827 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0305 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1ja1A/info/1ja1A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1ja1A/nostruct-align/1ja1A.t05-thin90.a2m.gz, have 86408 columns in 366 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n9pA/nostruct-align/1n9pA.t05-thin90.a2m.gz # 1n9pA.t05-thin90.a2m with 130 sequences, total weight= 33.9149 avg weight= 0.260884 41 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n9pA/info/1n9pA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n9pA/nostruct-align/1n9pA.t05-thin90.a2m.gz, have 86605 columns in 367 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tp6A/nostruct-align/1tp6A.t05-thin90.a2m.gz # 1tp6A.t05-thin90.a2m with 18 sequences, total weight= 9.03154 avg weight= 0.501752 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tp6A/info/1tp6A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tp6A/nostruct-align/1tp6A.t05-thin90.a2m.gz, have 86731 columns in 368 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wnaA/nostruct-align/1wnaA.t05-thin90.a2m.gz # 1wnaA.t05-thin90.a2m with 3 sequences, total weight= 3 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25905 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wnaA/info/1wnaA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wnaA/nostruct-align/1wnaA.t05-thin90.a2m.gz, have 86858 columns in 369 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dszA/nostruct-align/1dszA.t05-thin90.a2m.gz # 1dszA.t05-thin90.a2m with 829 sequences, total weight= 33.2399 avg weight= 0.0400964 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3007 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dszA/info/1dszA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dszA/nostruct-align/1dszA.t05-thin90.a2m.gz, have 86933 columns in 370 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yge/nostruct-align/1yge.t05-thin90.a2m.gz # 1yge.t05-thin90.a2m with 228 sequences, total weight= 66.1226 avg weight= 0.290011 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yge/info/1yge.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1yge/nostruct-align/1yge.t05-thin90.a2m.gz, have 87772 columns in 371 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gmxA/nostruct-align/1gmxA.t05-thin90.a2m.gz # 1gmxA.t05-thin90.a2m with 2044 sequences, total weight= 2044 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07983 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gmxA/info/1gmxA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gmxA/nostruct-align/1gmxA.t05-thin90.a2m.gz, have 87880 columns in 372 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fxlA/nostruct-align/1fxlA.t05-thin90.a2m.gz # 1fxlA.t05-thin90.a2m with 4616 sequences, total weight= 4616 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03983 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fxlA/info/1fxlA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fxlA/nostruct-align/1fxlA.t05-thin90.a2m.gz, have 88047 columns in 373 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u4bA/nostruct-align/1u4bA.t05-thin90.a2m.gz # 1u4bA.t05-thin90.a2m with 733 sequences, total weight= 733 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21839 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u4bA/info/1u4bA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1u4bA/nostruct-align/1u4bA.t05-thin90.a2m.gz, have 88627 columns in 374 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u7iA/nostruct-align/1u7iA.t05-thin90.a2m.gz # 1u7iA.t05-thin90.a2m with 682 sequences, total weight= 682 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02312 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u7iA/info/1u7iA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1u7iA/nostruct-align/1u7iA.t05-thin90.a2m.gz, have 88761 columns in 375 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1khiA/nostruct-align/1khiA.t05-thin90.a2m.gz # 1khiA.t05-thin90.a2m with 97 sequences, total weight= 16.439 avg weight= 0.169474 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1khiA/info/1khiA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1khiA/nostruct-align/1khiA.t05-thin90.a2m.gz, have 88908 columns in 376 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m2dA/nostruct-align/1m2dA.t05-thin90.a2m.gz # 1m2dA.t05-thin90.a2m with 155 sequences, total weight= 108.9 avg weight= 0.70258 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3009 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m2dA/info/1m2dA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m2dA/nostruct-align/1m2dA.t05-thin90.a2m.gz, have 89009 columns in 377 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oohA/nostruct-align/1oohA.t05-thin90.a2m.gz # 1oohA.t05-thin90.a2m with 274 sequences, total weight= 274 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.925042 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oohA/info/1oohA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oohA/nostruct-align/1oohA.t05-thin90.a2m.gz, have 89135 columns in 378 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d4oA/nostruct-align/1d4oA.t05-thin90.a2m.gz # 1d4oA.t05-thin90.a2m with 106 sequences, total weight= 5.88128 avg weight= 0.0554837 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d4oA/info/1d4oA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d4oA/nostruct-align/1d4oA.t05-thin90.a2m.gz, have 89312 columns in 379 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gk9A/nostruct-align/1gk9A.t05-thin90.a2m.gz # 1gk9A.t05-thin90.a2m with 131 sequences, total weight= 131 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26719 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gk9A/info/1gk9A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gk9A/nostruct-align/1gk9A.t05-thin90.a2m.gz, have 89520 columns in 380 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f46A/nostruct-align/1f46A.t05-thin90.a2m.gz # 1f46A.t05-thin90.a2m with 47 sequences, total weight= 22.5216 avg weight= 0.479183 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f46A/info/1f46A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f46A/nostruct-align/1f46A.t05-thin90.a2m.gz, have 89659 columns in 381 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dy5A/nostruct-align/1dy5A.t05-thin90.a2m.gz # 1dy5A.t05-thin90.a2m with 209 sequences, total weight= 50.4072 avg weight= 0.241183 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dy5A/info/1dy5A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dy5A/nostruct-align/1dy5A.t05-thin90.a2m.gz, have 89783 columns in 382 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mdc/nostruct-align/1mdc.t05-thin90.a2m.gz # 1mdc.t05-thin90.a2m with 277 sequences, total weight= 54.5291 avg weight= 0.196856 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mdc/info/1mdc.stride-mixed.o_notor2 WARNING: skipping g, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1m/1mdc/nostruct-align/1mdc.t05-thin90.a2m.gz, have 89914 columns in 383 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q6zA/nostruct-align/1q6zA.t05-thin90.a2m.gz # 1q6zA.t05-thin90.a2m with 1396 sequences, total weight= 1396 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0991 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q6zA/info/1q6zA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q6zA/nostruct-align/1q6zA.t05-thin90.a2m.gz, have 90438 columns in 384 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jf3A/nostruct-align/1jf3A.t05-thin90.a2m.gz # 1jf3A.t05-thin90.a2m with 935 sequences, total weight= 935 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25612 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jf3A/info/1jf3A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jf3A/nostruct-align/1jf3A.t05-thin90.a2m.gz, have 90585 columns in 385 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vhvA/nostruct-align/1vhvA.t05-thin90.a2m.gz # 1vhvA.t05-thin90.a2m with 1173 sequences, total weight= 1173 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10154 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vhvA/info/1vhvA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vhvA/nostruct-align/1vhvA.t05-thin90.a2m.gz, have 90836 columns in 386 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n55A/nostruct-align/1n55A.t05-thin90.a2m.gz # 1n55A.t05-thin90.a2m with 492 sequences, total weight= 28.2481 avg weight= 0.0574148 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n55A/info/1n55A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n55A/nostruct-align/1n55A.t05-thin90.a2m.gz, have 91085 columns in 387 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mtyD/nostruct-align/1mtyD.t05-thin90.a2m.gz # 1mtyD.t05-thin90.a2m with 163 sequences, total weight= 114.737 avg weight= 0.70391 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mtyD/info/1mtyD.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mtyD/nostruct-align/1mtyD.t05-thin90.a2m.gz, have 91597 columns in 388 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o98A/nostruct-align/1o98A.t05-thin90.a2m.gz # 1o98A.t05-thin90.a2m with 1055 sequences, total weight= 1055 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11075 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o98A/info/1o98A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o98A/nostruct-align/1o98A.t05-thin90.a2m.gz, have 92106 columns in 389 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3p/3pviA/nostruct-align/3pviA.t05-thin90.a2m.gz # 3pviA.t05-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24387 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3p/3pviA/info/3pviA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/3p/3pviA/nostruct-align/3pviA.t05-thin90.a2m.gz, have 92262 columns in 390 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uehA/nostruct-align/1uehA.t05-thin90.a2m.gz # 1uehA.t05-thin90.a2m with 402 sequences, total weight= 53.8212 avg weight= 0.133884 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3005 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uehA/info/1uehA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uehA/nostruct-align/1uehA.t05-thin90.a2m.gz, have 92476 columns in 391 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q9uA/nostruct-align/1q9uA.t05-thin90.a2m.gz # 1q9uA.t05-thin90.a2m with 99 sequences, total weight= 99 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13944 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q9uA/info/1q9uA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q9uA/nostruct-align/1q9uA.t05-thin90.a2m.gz, have 92604 columns in 392 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gwuA/nostruct-align/1gwuA.t05-thin90.a2m.gz # 1gwuA.t05-thin90.a2m with 871 sequences, total weight= 103.107 avg weight= 0.118378 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30465 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gwuA/info/1gwuA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gwuA/nostruct-align/1gwuA.t05-thin90.a2m.gz, have 92910 columns in 393 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n7hA/nostruct-align/1n7hA.t05-thin90.a2m.gz # 1n7hA.t05-thin90.a2m with 10909 sequences, total weight= 10909 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.931112 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n7hA/info/1n7hA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n7hA/nostruct-align/1n7hA.t05-thin90.a2m.gz, have 93241 columns in 394 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q8fA/nostruct-align/1q8fA.t05-thin90.a2m.gz # 1q8fA.t05-thin90.a2m with 275 sequences, total weight= 275 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26667 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q8fA/info/1q8fA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q8fA/nostruct-align/1q8fA.t05-thin90.a2m.gz, have 93549 columns in 395 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r2zA/nostruct-align/1r2zA.t05-thin90.a2m.gz # 1r2zA.t05-thin90.a2m with 325 sequences, total weight= 81.5363 avg weight= 0.250881 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30249 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r2zA/info/1r2zA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r2zA/nostruct-align/1r2zA.t05-thin90.a2m.gz, have 93822 columns in 396 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nwwA/nostruct-align/1nwwA.t05-thin90.a2m.gz # 1nwwA.t05-thin90.a2m with 768 sequences, total weight= 768 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.810173 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nwwA/info/1nwwA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nwwA/nostruct-align/1nwwA.t05-thin90.a2m.gz, have 93967 columns in 397 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oq1A/nostruct-align/1oq1A.t05-thin90.a2m.gz # 1oq1A.t05-thin90.a2m with 3 sequences, total weight= 2.42809 avg weight= 0.809364 8 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oq1A/info/1oq1A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oq1A/nostruct-align/1oq1A.t05-thin90.a2m.gz, have 94190 columns in 398 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qstA/nostruct-align/1qstA.t05-thin90.a2m.gz # 1qstA.t05-thin90.a2m with 4050 sequences, total weight= 4050 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.82359 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qstA/info/1qstA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qstA/nostruct-align/1qstA.t05-thin90.a2m.gz, have 94350 columns in 399 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k5nB/nostruct-align/1k5nB.t05-thin90.a2m.gz # 1k5nB.t05-thin90.a2m with 1472 sequences, total weight= 1472 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27631 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k5nB/info/1k5nB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k5nB/nostruct-align/1k5nB.t05-thin90.a2m.gz, have 94450 columns in 400 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eaqA/nostruct-align/1eaqA.t05-thin90.a2m.gz # 1eaqA.t05-thin90.a2m with 40 sequences, total weight= 8.02733 avg weight= 0.200683 19 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eaqA/info/1eaqA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1eaqA/nostruct-align/1eaqA.t05-thin90.a2m.gz, have 94574 columns in 401 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i6lA/nostruct-align/1i6lA.t05-thin90.a2m.gz # 1i6lA.t05-thin90.a2m with 785 sequences, total weight= 785 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24479 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i6lA/info/1i6lA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i6lA/nostruct-align/1i6lA.t05-thin90.a2m.gz, have 94900 columns in 402 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xakA/nostruct-align/1xakA.t05-thin90.a2m.gz # 1xakA.t05-thin90.a2m with 3 sequences, total weight= 2.41011 avg weight= 0.803371 7 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xakA/info/1xakA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xakA/nostruct-align/1xakA.t05-thin90.a2m.gz, have 94968 columns in 403 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3s/3seb/nostruct-align/3seb.t05-thin90.a2m.gz # 3seb.t05-thin90.a2m with 103 sequences, total weight= 54.8188 avg weight= 0.532221 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3s/3seb/info/3seb.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/3s/3seb/nostruct-align/3seb.t05-thin90.a2m.gz, have 95206 columns in 404 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d2vC/nostruct-align/1d2vC.t05-thin90.a2m.gz # 1d2vC.t05-thin90.a2m with 285 sequences, total weight= 170.601 avg weight= 0.598601 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3021 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d2vC/info/1d2vC.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d2vC/nostruct-align/1d2vC.t05-thin90.a2m.gz, have 95672 columns in 405 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qv1A/nostruct-align/1qv1A.t05-thin90.a2m.gz # 1qv1A.t05-thin90.a2m with 800 sequences, total weight= 800 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09326 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qv1A/info/1qv1A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qv1A/nostruct-align/1qv1A.t05-thin90.a2m.gz, have 95859 columns in 406 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x74A/nostruct-align/1x74A.t05-thin90.a2m.gz # 1x74A.t05-thin90.a2m with 778 sequences, total weight= 105.042 avg weight= 0.135015 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30563 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x74A/info/1x74A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1x74A/nostruct-align/1x74A.t05-thin90.a2m.gz, have 96213 columns in 407 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qreA/nostruct-align/1qreA.t05-thin90.a2m.gz # 1qreA.t05-thin90.a2m with 1997 sequences, total weight= 1997 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10719 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qreA/info/1qreA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qreA/nostruct-align/1qreA.t05-thin90.a2m.gz, have 96423 columns in 408 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ow4A/nostruct-align/1ow4A.t05-thin90.a2m.gz # 1ow4A.t05-thin90.a2m with 3 sequences, total weight= 3 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.973865 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ow4A/info/1ow4A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ow4A/nostruct-align/1ow4A.t05-thin90.a2m.gz, have 96543 columns in 409 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mw9X/nostruct-align/1mw9X.t05-thin90.a2m.gz # 1mw9X.t05-thin90.a2m with 541 sequences, total weight= 68.9948 avg weight= 0.127532 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3029 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mw9X/info/1mw9X.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mw9X/nostruct-align/1mw9X.t05-thin90.a2m.gz, have 97099 columns in 410 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n57A/nostruct-align/1n57A.t05-thin90.a2m.gz # 1n57A.t05-thin90.a2m with 853 sequences, total weight= 853 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1954 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n57A/info/1n57A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n57A/nostruct-align/1n57A.t05-thin90.a2m.gz, have 97378 columns in 411 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t4bA/nostruct-align/1t4bA.t05-thin90.a2m.gz # 1t4bA.t05-thin90.a2m with 1850 sequences, total weight= 1023 avg weight= 0.552974 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31285 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t4bA/info/1t4bA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t4bA/nostruct-align/1t4bA.t05-thin90.a2m.gz, have 97745 columns in 412 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mj5A/nostruct-align/1mj5A.t05-thin90.a2m.gz # 1mj5A.t05-thin90.a2m with 6941 sequences, total weight= 6941 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.653622 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mj5A/info/1mj5A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mj5A/nostruct-align/1mj5A.t05-thin90.a2m.gz, have 98042 columns in 413 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o08A/nostruct-align/1o08A.t05-thin90.a2m.gz # 1o08A.t05-thin90.a2m with 3456 sequences, total weight= 3456 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.873408 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o08A/info/1o08A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o08A/nostruct-align/1o08A.t05-thin90.a2m.gz, have 98263 columns in 414 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hxiA/nostruct-align/1hxiA.t05-thin90.a2m.gz # 1hxiA.t05-thin90.a2m with 4431 sequences, total weight= 4431 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.960919 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hxiA/info/1hxiA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hxiA/nostruct-align/1hxiA.t05-thin90.a2m.gz, have 98375 columns in 415 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1od6A/nostruct-align/1od6A.t05-thin90.a2m.gz # 1od6A.t05-thin90.a2m with 1220 sequences, total weight= 1220 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04643 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1od6A/info/1od6A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1od6A/nostruct-align/1od6A.t05-thin90.a2m.gz, have 98530 columns in 416 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jbeA/nostruct-align/1jbeA.t05-thin90.a2m.gz # 1jbeA.t05-thin90.a2m with 9137 sequences, total weight= 9137 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22895 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jbeA/info/1jbeA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jbeA/nostruct-align/1jbeA.t05-thin90.a2m.gz, have 98656 columns in 417 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uzvA/nostruct-align/1uzvA.t05-thin90.a2m.gz # 1uzvA.t05-thin90.a2m with 12 sequences, total weight= 5.03536 avg weight= 0.419613 19 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uzvA/info/1uzvA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uzvA/nostruct-align/1uzvA.t05-thin90.a2m.gz, have 98770 columns in 418 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wehA/nostruct-align/1wehA.t05-thin90.a2m.gz # 1wehA.t05-thin90.a2m with 375 sequences, total weight= 139.907 avg weight= 0.373085 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30545 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wehA/info/1wehA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wehA/nostruct-align/1wehA.t05-thin90.a2m.gz, have 98941 columns in 419 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wojA/nostruct-align/1wojA.t05-thin90.a2m.gz # 1wojA.t05-thin90.a2m with 11 sequences, total weight= 3.83887 avg weight= 0.348988 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wojA/info/1wojA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wojA/nostruct-align/1wojA.t05-thin90.a2m.gz, have 99150 columns in 420 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lyqA/nostruct-align/1lyqA.t05-thin90.a2m.gz # 1lyqA.t05-thin90.a2m with 93 sequences, total weight= 32.9463 avg weight= 0.354261 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lyqA/info/1lyqA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lyqA/nostruct-align/1lyqA.t05-thin90.a2m.gz, have 99251 columns in 421 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dmgA/nostruct-align/1dmgA.t05-thin90.a2m.gz # 1dmgA.t05-thin90.a2m with 332 sequences, total weight= 119.188 avg weight= 0.358999 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30103 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dmgA/info/1dmgA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dmgA/nostruct-align/1dmgA.t05-thin90.a2m.gz, have 99423 columns in 422 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bemA/nostruct-align/2bemA.t05-thin90.a2m.gz # 2bemA.t05-thin90.a2m with 109 sequences, total weight= 49.8003 avg weight= 0.456884 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bemA/info/2bemA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2b/2bemA/nostruct-align/2bemA.t05-thin90.a2m.gz, have 99593 columns in 423 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1msk/nostruct-align/1msk.t05-thin90.a2m.gz # 1msk.t05-thin90.a2m with 148 sequences, total weight= 29.7728 avg weight= 0.201168 41 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1msk/info/1msk.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1msk/nostruct-align/1msk.t05-thin90.a2m.gz, have 99920 columns in 424 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zceA/nostruct-align/1zceA.t05-thin90.a2m.gz # 1zceA.t05-thin90.a2m with 122 sequences, total weight= 21.6996 avg weight= 0.177866 41 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zceA/info/1zceA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1z/1zceA/nostruct-align/1zceA.t05-thin90.a2m.gz, have 100066 columns in 425 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xd3A/nostruct-align/1xd3A.t05-thin90.a2m.gz # 1xd3A.t05-thin90.a2m with 132 sequences, total weight= 37.8878 avg weight= 0.287029 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xd3A/info/1xd3A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xd3A/nostruct-align/1xd3A.t05-thin90.a2m.gz, have 100295 columns in 426 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y7bA/nostruct-align/1y7bA.t05-thin90.a2m.gz # 1y7bA.t05-thin90.a2m with 754 sequences, total weight= 754 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02646 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y7bA/info/1y7bA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1y7bA/nostruct-align/1y7bA.t05-thin90.a2m.gz, have 100829 columns in 427 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dkiA/nostruct-align/1dkiA.t05-thin90.a2m.gz # 1dkiA.t05-thin90.a2m with 13 sequences, total weight= 13 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12618 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dkiA/info/1dkiA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dkiA/nostruct-align/1dkiA.t05-thin90.a2m.gz, have 101132 columns in 428 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ofzA/nostruct-align/1ofzA.t05-thin90.a2m.gz # 1ofzA.t05-thin90.a2m with 42 sequences, total weight= 42 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.991099 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ofzA/info/1ofzA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ofzA/nostruct-align/1ofzA.t05-thin90.a2m.gz, have 101444 columns in 429 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hqsA/nostruct-align/1hqsA.t05-thin90.a2m.gz # 1hqsA.t05-thin90.a2m with 758 sequences, total weight= 102.942 avg weight= 0.135807 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30267 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hqsA/info/1hqsA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hqsA/nostruct-align/1hqsA.t05-thin90.a2m.gz, have 101867 columns in 430 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1ds1A/nostruct-align/1ds1A.t05-thin90.a2m.gz # 1ds1A.t05-thin90.a2m with 476 sequences, total weight= 476 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.959579 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1ds1A/info/1ds1A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1ds1A/nostruct-align/1ds1A.t05-thin90.a2m.gz, have 102190 columns in 431 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g8qA/nostruct-align/1g8qA.t05-thin90.a2m.gz # 1g8qA.t05-thin90.a2m with 43 sequences, total weight= 17.5511 avg weight= 0.408164 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g8qA/info/1g8qA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g8qA/nostruct-align/1g8qA.t05-thin90.a2m.gz, have 102280 columns in 432 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c7kA/nostruct-align/1c7kA.t05-thin90.a2m.gz # 1c7kA.t05-thin90.a2m with 146 sequences, total weight= 15.0703 avg weight= 0.103221 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c7kA/info/1c7kA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1c7kA/nostruct-align/1c7kA.t05-thin90.a2m.gz, have 102412 columns in 433 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mwpA/nostruct-align/1mwpA.t05-thin90.a2m.gz # 1mwpA.t05-thin90.a2m with 31 sequences, total weight= 6.78142 avg weight= 0.218755 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mwpA/info/1mwpA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mwpA/nostruct-align/1mwpA.t05-thin90.a2m.gz, have 102508 columns in 434 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kicA/nostruct-align/1kicA.t05-thin90.a2m.gz # 1kicA.t05-thin90.a2m with 273 sequences, total weight= 273 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27555 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kicA/info/1kicA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kicA/nostruct-align/1kicA.t05-thin90.a2m.gz, have 102825 columns in 435 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1ntyA/nostruct-align/1ntyA.t05-thin90.a2m.gz # 1ntyA.t05-thin90.a2m with 1026 sequences, total weight= 1026 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00351 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1ntyA/info/1ntyA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1ntyA/nostruct-align/1ntyA.t05-thin90.a2m.gz, have 103130 columns in 436 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1ny1A/nostruct-align/1ny1A.t05-thin90.a2m.gz # 1ny1A.t05-thin90.a2m with 876 sequences, total weight= 876 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.957868 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1ny1A/info/1ny1A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1ny1A/nostruct-align/1ny1A.t05-thin90.a2m.gz, have 103365 columns in 437 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o1yA/nostruct-align/1o1yA.t05-thin90.a2m.gz # 1o1yA.t05-thin90.a2m with 2654 sequences, total weight= 2654 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.985819 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o1yA/info/1o1yA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o1yA/nostruct-align/1o1yA.t05-thin90.a2m.gz, have 103595 columns in 438 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t92A/nostruct-align/1t92A.t05-thin90.a2m.gz # 1t92A.t05-thin90.a2m with 88 sequences, total weight= 14.9738 avg weight= 0.170157 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t92A/info/1t92A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t92A/nostruct-align/1t92A.t05-thin90.a2m.gz, have 103703 columns in 439 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1izcA/nostruct-align/1izcA.t05-thin90.a2m.gz # 1izcA.t05-thin90.a2m with 1177 sequences, total weight= 1177 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09244 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1izcA/info/1izcA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1izcA/nostruct-align/1izcA.t05-thin90.a2m.gz, have 104002 columns in 440 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k8uA/nostruct-align/1k8uA.t05-thin90.a2m.gz # 1k8uA.t05-thin90.a2m with 186 sequences, total weight= 38.2985 avg weight= 0.205906 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k8uA/info/1k8uA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k8uA/nostruct-align/1k8uA.t05-thin90.a2m.gz, have 104091 columns in 441 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ig0A/nostruct-align/1ig0A.t05-thin90.a2m.gz # 1ig0A.t05-thin90.a2m with 124 sequences, total weight= 124 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16916 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ig0A/info/1ig0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ig0A/nostruct-align/1ig0A.t05-thin90.a2m.gz, have 104408 columns in 442 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fi2A/nostruct-align/1fi2A.t05-thin90.a2m.gz # 1fi2A.t05-thin90.a2m with 815 sequences, total weight= 815 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.997373 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fi2A/info/1fi2A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fi2A/nostruct-align/1fi2A.t05-thin90.a2m.gz, have 104609 columns in 443 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1ddwA/nostruct-align/1ddwA.t05-thin90.a2m.gz # 1ddwA.t05-thin90.a2m with 60 sequences, total weight= 12.0141 avg weight= 0.200236 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1ddwA/info/1ddwA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1ddwA/nostruct-align/1ddwA.t05-thin90.a2m.gz, have 104720 columns in 444 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p1xA/nostruct-align/1p1xA.t05-thin90.a2m.gz # 1p1xA.t05-thin90.a2m with 214 sequences, total weight= 54.5255 avg weight= 0.254792 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30039 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p1xA/info/1p1xA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p1xA/nostruct-align/1p1xA.t05-thin90.a2m.gz, have 104970 columns in 445 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ydyA/nostruct-align/1ydyA.t05-thin90.a2m.gz # 1ydyA.t05-thin90.a2m with 639 sequences, total weight= 639 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01006 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ydyA/info/1ydyA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1ydyA/nostruct-align/1ydyA.t05-thin90.a2m.gz, have 105298 columns in 446 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kw4A/nostruct-align/1kw4A.t05-thin90.a2m.gz # 1kw4A.t05-thin90.a2m with 96 sequences, total weight= 16.7234 avg weight= 0.174202 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kw4A/info/1kw4A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kw4A/nostruct-align/1kw4A.t05-thin90.a2m.gz, have 105368 columns in 447 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m4jA/nostruct-align/1m4jA.t05-thin90.a2m.gz # 1m4jA.t05-thin90.a2m with 255 sequences, total weight= 255 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26891 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m4jA/info/1m4jA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m4jA/nostruct-align/1m4jA.t05-thin90.a2m.gz, have 105501 columns in 448 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t6cA/nostruct-align/1t6cA.t05-thin90.a2m.gz # 1t6cA.t05-thin90.a2m with 1786 sequences, total weight= 1786 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09256 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t6cA/info/1t6cA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t6cA/nostruct-align/1t6cA.t05-thin90.a2m.gz, have 105807 columns in 449 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w27A/nostruct-align/1w27A.t05-thin90.a2m.gz # 1w27A.t05-thin90.a2m with 289 sequences, total weight= 41.9806 avg weight= 0.145262 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w27A/info/1w27A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w27A/nostruct-align/1w27A.t05-thin90.a2m.gz, have 106497 columns in 450 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o7nA/nostruct-align/1o7nA.t05-thin90.a2m.gz # 1o7nA.t05-thin90.a2m with 909 sequences, total weight= 909 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.97762 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o7nA/info/1o7nA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o7nA/nostruct-align/1o7nA.t05-thin90.a2m.gz, have 106944 columns in 451 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1ak0/nostruct-align/1ak0.t05-thin90.a2m.gz # 1ak0.t05-thin90.a2m with 90 sequences, total weight= 90 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20321 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1ak0/info/1ak0.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1ak0/nostruct-align/1ak0.t05-thin90.a2m.gz, have 107208 columns in 452 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/25/256bA/nostruct-align/256bA.t05-thin90.a2m.gz # 256bA.t05-thin90.a2m with 12 sequences, total weight= 9.03788 avg weight= 0.753157 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/25/256bA/info/256bA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/25/256bA/nostruct-align/256bA.t05-thin90.a2m.gz, have 107314 columns in 453 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q2hA/nostruct-align/1q2hA.t05-thin90.a2m.gz # 1q2hA.t05-thin90.a2m with 17 sequences, total weight= 6.68165 avg weight= 0.393038 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q2hA/info/1q2hA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q2hA/nostruct-align/1q2hA.t05-thin90.a2m.gz, have 107377 columns in 454 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h5qA/nostruct-align/1h5qA.t05-thin90.a2m.gz # 1h5qA.t05-thin90.a2m with 9307 sequences, total weight= 9307 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13484 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h5qA/info/1h5qA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h5qA/nostruct-align/1h5qA.t05-thin90.a2m.gz, have 107637 columns in 455 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rgxA/nostruct-align/1rgxA.t05-thin90.a2m.gz # 1rgxA.t05-thin90.a2m with 16 sequences, total weight= 3.62915 avg weight= 0.226822 20 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rgxA/info/1rgxA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rgxA/nostruct-align/1rgxA.t05-thin90.a2m.gz, have 107726 columns in 456 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tyv/nostruct-align/1tyv.t05-thin90.a2m.gz # 1tyv.t05-thin90.a2m with 6 sequences, total weight= 3.92909 avg weight= 0.654849 9 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tyv/info/1tyv.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tyv/nostruct-align/1tyv.t05-thin90.a2m.gz, have 108268 columns in 457 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tqhA/nostruct-align/1tqhA.t05-thin90.a2m.gz # 1tqhA.t05-thin90.a2m with 9417 sequences, total weight= 9417 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.702254 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tqhA/info/1tqhA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tqhA/nostruct-align/1tqhA.t05-thin90.a2m.gz, have 108510 columns in 458 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fdr/nostruct-align/1fdr.t05-thin90.a2m.gz # 1fdr.t05-thin90.a2m with 1943 sequences, total weight= 1943 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02175 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fdr/info/1fdr.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fdr/nostruct-align/1fdr.t05-thin90.a2m.gz, have 108754 columns in 459 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1chd/nostruct-align/1chd.t05-thin90.a2m.gz # 1chd.t05-thin90.a2m with 273 sequences, total weight= 33.3926 avg weight= 0.122317 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3004 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1chd/info/1chd.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1chd/nostruct-align/1chd.t05-thin90.a2m.gz, have 108952 columns in 460 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a3c/nostruct-align/1a3c.t05-thin90.a2m.gz # 1a3c.t05-thin90.a2m with 1030 sequences, total weight= 1030 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07193 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a3c/info/1a3c.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1a3c/nostruct-align/1a3c.t05-thin90.a2m.gz, have 109118 columns in 461 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fyeA/nostruct-align/1fyeA.t05-thin90.a2m.gz # 1fyeA.t05-thin90.a2m with 290 sequences, total weight= 290 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05297 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fyeA/info/1fyeA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fyeA/nostruct-align/1fyeA.t05-thin90.a2m.gz, have 109338 columns in 462 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ia8A/nostruct-align/1ia8A.t05-thin90.a2m.gz # 1ia8A.t05-thin90.a2m with 13391 sequences, total weight= 13391 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08851 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ia8A/info/1ia8A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ia8A/nostruct-align/1ia8A.t05-thin90.a2m.gz, have 109610 columns in 463 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k5nA/nostruct-align/1k5nA.t05-thin90.a2m.gz # 1k5nA.t05-thin90.a2m with 2258 sequences, total weight= 2258 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27903 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k5nA/info/1k5nA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k5nA/nostruct-align/1k5nA.t05-thin90.a2m.gz, have 109886 columns in 464 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hfuA/nostruct-align/1hfuA.t05-thin90.a2m.gz # 1hfuA.t05-thin90.a2m with 844 sequences, total weight= 844 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11336 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hfuA/info/1hfuA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hfuA/nostruct-align/1hfuA.t05-thin90.a2m.gz, have 110386 columns in 465 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ym3A/nostruct-align/1ym3A.t05-thin90.a2m.gz # 1ym3A.t05-thin90.a2m with 363 sequences, total weight= 251.974 avg weight= 0.694144 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30381 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ym3A/info/1ym3A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1ym3A/nostruct-align/1ym3A.t05-thin90.a2m.gz, have 110579 columns in 466 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e30A/nostruct-align/1e30A.t05-thin90.a2m.gz # 1e30A.t05-thin90.a2m with 364 sequences, total weight= 364 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.971481 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e30A/info/1e30A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e30A/nostruct-align/1e30A.t05-thin90.a2m.gz, have 110732 columns in 467 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rttA/nostruct-align/1rttA.t05-thin90.a2m.gz # 1rttA.t05-thin90.a2m with 1220 sequences, total weight= 1220 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.976381 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rttA/info/1rttA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rttA/nostruct-align/1rttA.t05-thin90.a2m.gz, have 110906 columns in 468 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fl0A/nostruct-align/1fl0A.t05-thin90.a2m.gz # 1fl0A.t05-thin90.a2m with 511 sequences, total weight= 106.723 avg weight= 0.208851 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3036 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fl0A/info/1fl0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fl0A/nostruct-align/1fl0A.t05-thin90.a2m.gz, have 111070 columns in 469 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tovA/nostruct-align/1tovA.t05-thin90.a2m.gz # 1tovA.t05-thin90.a2m with 241 sequences, total weight= 73.165 avg weight= 0.303589 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30284 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tovA/info/1tovA.stride-mixed.o_notor2 WARNING: skipping h, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1t/1tovA/nostruct-align/1tovA.t05-thin90.a2m.gz, have 111167 columns in 470 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dqeA/nostruct-align/1dqeA.t05-thin90.a2m.gz # 1dqeA.t05-thin90.a2m with 145 sequences, total weight= 145 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15503 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dqeA/info/1dqeA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dqeA/nostruct-align/1dqeA.t05-thin90.a2m.gz, have 111304 columns in 471 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i0lA/nostruct-align/1i0lA.t05-thin90.a2m.gz # 1i0lA.t05-thin90.a2m with 1295 sequences, total weight= 1295 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03986 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i0lA/info/1i0lA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i0lA/nostruct-align/1i0lA.t05-thin90.a2m.gz, have 111496 columns in 472 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fcyA/nostruct-align/1fcyA.t05-thin90.a2m.gz # 1fcyA.t05-thin90.a2m with 1087 sequences, total weight= 1087 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.958982 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fcyA/info/1fcyA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fcyA/nostruct-align/1fcyA.t05-thin90.a2m.gz, have 111732 columns in 473 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nox/nostruct-align/1nox.t05-thin90.a2m.gz # 1nox.t05-thin90.a2m with 916 sequences, total weight= 916 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01273 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nox/info/1nox.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nox/nostruct-align/1nox.t05-thin90.a2m.gz, have 111932 columns in 474 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ug4A/nostruct-align/1ug4A.t05-thin90.a2m.gz # 1ug4A.t05-thin90.a2m with 159 sequences, total weight= 18.8052 avg weight= 0.118272 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ug4A/info/1ug4A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ug4A/nostruct-align/1ug4A.t05-thin90.a2m.gz, have 111992 columns in 475 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1onwA/nostruct-align/1onwA.t05-thin90.a2m.gz # 1onwA.t05-thin90.a2m with 2216 sequences, total weight= 2216 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.925623 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1onwA/info/1onwA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1onwA/nostruct-align/1onwA.t05-thin90.a2m.gz, have 112368 columns in 476 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t0pB/nostruct-align/1t0pB.t05-thin90.a2m.gz # 1t0pB.t05-thin90.a2m with 35 sequences, total weight= 11.6253 avg weight= 0.332152 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t0pB/info/1t0pB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t0pB/nostruct-align/1t0pB.t05-thin90.a2m.gz, have 112454 columns in 477 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ijqA/nostruct-align/1ijqA.t05-thin90.a2m.gz # 1ijqA.t05-thin90.a2m with 1580 sequences, total weight= 1580 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.956728 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ijqA/info/1ijqA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ijqA/nostruct-align/1ijqA.t05-thin90.a2m.gz, have 112762 columns in 478 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e1hA/nostruct-align/1e1hA.t05-thin90.a2m.gz # 1e1hA.t05-thin90.a2m with 26 sequences, total weight= 9.168 avg weight= 0.352615 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e1hA/info/1e1hA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e1hA/nostruct-align/1e1hA.t05-thin90.a2m.gz, have 112997 columns in 479 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nepA/nostruct-align/1nepA.t05-thin90.a2m.gz # 1nepA.t05-thin90.a2m with 101 sequences, total weight= 101 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20913 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nepA/info/1nepA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nepA/nostruct-align/1nepA.t05-thin90.a2m.gz, have 113127 columns in 480 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w41A/nostruct-align/1w41A.t05-thin90.a2m.gz # 1w41A.t05-thin90.a2m with 318 sequences, total weight= 128.47 avg weight= 0.403993 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30421 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w41A/info/1w41A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w41A/nostruct-align/1w41A.t05-thin90.a2m.gz, have 113226 columns in 481 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s2wA/nostruct-align/1s2wA.t05-thin90.a2m.gz # 1s2wA.t05-thin90.a2m with 497 sequences, total weight= 151.788 avg weight= 0.305408 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30679 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s2wA/info/1s2wA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s2wA/nostruct-align/1s2wA.t05-thin90.a2m.gz, have 113484 columns in 482 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u60A/nostruct-align/1u60A.t05-thin90.a2m.gz # 1u60A.t05-thin90.a2m with 188 sequences, total weight= 68.02 avg weight= 0.361809 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3005 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u60A/info/1u60A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1u60A/nostruct-align/1u60A.t05-thin90.a2m.gz, have 113793 columns in 483 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jg1A/nostruct-align/1jg1A.t05-thin90.a2m.gz # 1jg1A.t05-thin90.a2m with 11371 sequences, total weight= 11371 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.632303 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jg1A/info/1jg1A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jg1A/nostruct-align/1jg1A.t05-thin90.a2m.gz, have 114008 columns in 484 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f3uB/nostruct-align/1f3uB.t05-thin90.a2m.gz # 1f3uB.t05-thin90.a2m with 18 sequences, total weight= 11.4942 avg weight= 0.638565 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f3uB/info/1f3uB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f3uB/nostruct-align/1f3uB.t05-thin90.a2m.gz, have 114147 columns in 485 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mxiA/nostruct-align/1mxiA.t05-thin90.a2m.gz # 1mxiA.t05-thin90.a2m with 949 sequences, total weight= 949 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24211 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mxiA/info/1mxiA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mxiA/nostruct-align/1mxiA.t05-thin90.a2m.gz, have 114303 columns in 486 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tbfA/nostruct-align/1tbfA.t05-thin90.a2m.gz # 1tbfA.t05-thin90.a2m with 287 sequences, total weight= 129.857 avg weight= 0.452463 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30235 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tbfA/info/1tbfA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tbfA/nostruct-align/1tbfA.t05-thin90.a2m.gz, have 114629 columns in 487 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rh6A/nostruct-align/1rh6A.t05-thin90.a2m.gz # 1rh6A.t05-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.952929 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rh6A/info/1rh6A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rh6A/nostruct-align/1rh6A.t05-thin90.a2m.gz, have 114684 columns in 488 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jfxA/nostruct-align/1jfxA.t05-thin90.a2m.gz # 1jfxA.t05-thin90.a2m with 195 sequences, total weight= 195 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18362 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jfxA/info/1jfxA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jfxA/nostruct-align/1jfxA.t05-thin90.a2m.gz, have 114901 columns in 489 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j79A/nostruct-align/1j79A.t05-thin90.a2m.gz # 1j79A.t05-thin90.a2m with 644 sequences, total weight= 644 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19056 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j79A/info/1j79A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j79A/nostruct-align/1j79A.t05-thin90.a2m.gz, have 115244 columns in 490 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o9wA/nostruct-align/1o9wA.t05-thin90.a2m.gz # 1o9wA.t05-thin90.a2m with 2 sequences, total weight= 1.88352 avg weight= 0.94176 6 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o9wA/info/1o9wA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o9wA/nostruct-align/1o9wA.t05-thin90.a2m.gz, have 115413 columns in 491 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m70A/nostruct-align/1m70A.t05-thin90.a2m.gz # 1m70A.t05-thin90.a2m with 1198 sequences, total weight= 1198 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04099 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m70A/info/1m70A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m70A/nostruct-align/1m70A.t05-thin90.a2m.gz, have 115603 columns in 492 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pxzA/nostruct-align/1pxzA.t05-thin90.a2m.gz # 1pxzA.t05-thin90.a2m with 245 sequences, total weight= 245 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20129 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pxzA/info/1pxzA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pxzA/nostruct-align/1pxzA.t05-thin90.a2m.gz, have 115949 columns in 493 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vmbA/nostruct-align/1vmbA.t05-thin90.a2m.gz # 1vmbA.t05-thin90.a2m with 228 sequences, total weight= 115.736 avg weight= 0.507616 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30062 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vmbA/info/1vmbA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vmbA/nostruct-align/1vmbA.t05-thin90.a2m.gz, have 116056 columns in 494 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bjuA/nostruct-align/2bjuA.t05-thin90.a2m.gz # 2bjuA.t05-thin90.a2m with 919 sequences, total weight= 36.5265 avg weight= 0.0397459 41 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bjuA/info/2bjuA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2b/2bjuA/nostruct-align/2bjuA.t05-thin90.a2m.gz, have 116385 columns in 495 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lq9A/nostruct-align/1lq9A.t05-thin90.a2m.gz # 1lq9A.t05-thin90.a2m with 114 sequences, total weight= 114 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06393 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lq9A/info/1lq9A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lq9A/nostruct-align/1lq9A.t05-thin90.a2m.gz, have 116497 columns in 496 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p90A/nostruct-align/1p90A.t05-thin90.a2m.gz # 1p90A.t05-thin90.a2m with 230 sequences, total weight= 230 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16119 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p90A/info/1p90A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p90A/nostruct-align/1p90A.t05-thin90.a2m.gz, have 116620 columns in 497 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zin/nostruct-align/1zin.t05-thin90.a2m.gz # 1zin.t05-thin90.a2m with 2000 sequences, total weight= 2000 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.914141 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zin/info/1zin.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1z/1zin/nostruct-align/1zin.t05-thin90.a2m.gz, have 116837 columns in 498 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l5oA/nostruct-align/1l5oA.t05-thin90.a2m.gz # 1l5oA.t05-thin90.a2m with 165 sequences, total weight= 45.8398 avg weight= 0.277817 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l5oA/info/1l5oA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1l/1l5oA/nostruct-align/1l5oA.t05-thin90.a2m.gz, have 117183 columns in 499 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qddA/nostruct-align/1qddA.t05-thin90.a2m.gz # 1qddA.t05-thin90.a2m with 2302 sequences, total weight= 2302 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.963674 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qddA/info/1qddA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qddA/nostruct-align/1qddA.t05-thin90.a2m.gz, have 117327 columns in 500 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jhfA/nostruct-align/1jhfA.t05-thin90.a2m.gz # 1jhfA.t05-thin90.a2m with 568 sequences, total weight= 568 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15255 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jhfA/info/1jhfA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jhfA/nostruct-align/1jhfA.t05-thin90.a2m.gz, have 117524 columns in 501 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d4aA/nostruct-align/1d4aA.t05-thin90.a2m.gz # 1d4aA.t05-thin90.a2m with 1153 sequences, total weight= 1153 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06489 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d4aA/info/1d4aA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d4aA/nostruct-align/1d4aA.t05-thin90.a2m.gz, have 117797 columns in 502 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rgzA/nostruct-align/1rgzA.t05-thin90.a2m.gz # 1rgzA.t05-thin90.a2m with 848 sequences, total weight= 848 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.997511 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rgzA/info/1rgzA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rgzA/nostruct-align/1rgzA.t05-thin90.a2m.gz, have 118160 columns in 503 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s3eA/nostruct-align/1s3eA.t05-thin90.a2m.gz # 1s3eA.t05-thin90.a2m with 7958 sequences, total weight= 7958 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.742793 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s3eA/info/1s3eA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s3eA/nostruct-align/1s3eA.t05-thin90.a2m.gz, have 118659 columns in 504 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tn6B/nostruct-align/1tn6B.t05-thin90.a2m.gz # 1tn6B.t05-thin90.a2m with 709 sequences, total weight= 709 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.987461 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tn6B/info/1tn6B.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tn6B/nostruct-align/1tn6B.t05-thin90.a2m.gz, have 119069 columns in 505 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h80A/nostruct-align/1h80A.t05-thin90.a2m.gz # 1h80A.t05-thin90.a2m with 753 sequences, total weight= 753 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.987334 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h80A/info/1h80A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h80A/nostruct-align/1h80A.t05-thin90.a2m.gz, have 119502 columns in 506 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sqsA/nostruct-align/1sqsA.t05-thin90.a2m.gz # 1sqsA.t05-thin90.a2m with 1306 sequences, total weight= 1306 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.949113 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sqsA/info/1sqsA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sqsA/nostruct-align/1sqsA.t05-thin90.a2m.gz, have 119734 columns in 507 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ix9A/nostruct-align/1ix9A.t05-thin90.a2m.gz # 1ix9A.t05-thin90.a2m with 671 sequences, total weight= 37.2736 avg weight= 0.0555493 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ix9A/info/1ix9A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ix9A/nostruct-align/1ix9A.t05-thin90.a2m.gz, have 119939 columns in 508 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n97A/nostruct-align/1n97A.t05-thin90.a2m.gz # 1n97A.t05-thin90.a2m with 4529 sequences, total weight= 4529 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00278 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n97A/info/1n97A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n97A/nostruct-align/1n97A.t05-thin90.a2m.gz, have 120324 columns in 509 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ornA/nostruct-align/1ornA.t05-thin90.a2m.gz # 1ornA.t05-thin90.a2m with 870 sequences, total weight= 870 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15981 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ornA/info/1ornA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ornA/nostruct-align/1ornA.t05-thin90.a2m.gz, have 120538 columns in 510 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pkhA/nostruct-align/1pkhA.t05-thin90.a2m.gz # 1pkhA.t05-thin90.a2m with 574 sequences, total weight= 574 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18509 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pkhA/info/1pkhA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pkhA/nostruct-align/1pkhA.t05-thin90.a2m.gz, have 120720 columns in 511 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o5kA/nostruct-align/1o5kA.t05-thin90.a2m.gz # 1o5kA.t05-thin90.a2m with 663 sequences, total weight= 663 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27317 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o5kA/info/1o5kA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o5kA/nostruct-align/1o5kA.t05-thin90.a2m.gz, have 121015 columns in 512 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xg0A/nostruct-align/1xg0A.t05-thin90.a2m.gz # 1xg0A.t05-thin90.a2m with 9 sequences, total weight= 5.76171 avg weight= 0.640189 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xg0A/info/1xg0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xg0A/nostruct-align/1xg0A.t05-thin90.a2m.gz, have 121091 columns in 513 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kqrA/nostruct-align/1kqrA.t05-thin90.a2m.gz # 1kqrA.t05-thin90.a2m with 62 sequences, total weight= 7.70826 avg weight= 0.124327 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kqrA/info/1kqrA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kqrA/nostruct-align/1kqrA.t05-thin90.a2m.gz, have 121251 columns in 514 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bjvA/nostruct-align/2bjvA.t05-thin90.a2m.gz # 2bjvA.t05-thin90.a2m with 5367 sequences, total weight= 5367 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07772 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bjvA/info/2bjvA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2b/2bjvA/nostruct-align/2bjvA.t05-thin90.a2m.gz, have 121487 columns in 515 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xeoA/nostruct-align/1xeoA.t05-thin90.a2m.gz # 1xeoA.t05-thin90.a2m with 393 sequences, total weight= 43.9412 avg weight= 0.11181 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30104 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xeoA/info/1xeoA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xeoA/nostruct-align/1xeoA.t05-thin90.a2m.gz, have 121652 columns in 516 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tif/nostruct-align/1tif.t05-thin90.a2m.gz # 1tif.t05-thin90.a2m with 233 sequences, total weight= 11.2843 avg weight= 0.0484306 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tif/info/1tif.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tif/nostruct-align/1tif.t05-thin90.a2m.gz, have 121728 columns in 517 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dqpA/nostruct-align/1dqpA.t05-thin90.a2m.gz # 1dqpA.t05-thin90.a2m with 2043 sequences, total weight= 2043 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03742 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dqpA/info/1dqpA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dqpA/nostruct-align/1dqpA.t05-thin90.a2m.gz, have 121958 columns in 518 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nn5A/nostruct-align/1nn5A.t05-thin90.a2m.gz # 1nn5A.t05-thin90.a2m with 10608 sequences, total weight= 10608 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.696283 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nn5A/info/1nn5A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nn5A/nostruct-align/1nn5A.t05-thin90.a2m.gz, have 122162 columns in 519 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1z2uA/nostruct-align/1z2uA.t05-thin90.a2m.gz # 1z2uA.t05-thin90.a2m with 944 sequences, total weight= 400.131 avg weight= 0.423867 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31508 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1z2uA/info/1z2uA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1z/1z2uA/nostruct-align/1z2uA.t05-thin90.a2m.gz, have 122312 columns in 520 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ucrA/nostruct-align/1ucrA.t05-thin90.a2m.gz # 1ucrA.t05-thin90.a2m with 13 sequences, total weight= 5.95035 avg weight= 0.457719 19 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ucrA/info/1ucrA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ucrA/nostruct-align/1ucrA.t05-thin90.a2m.gz, have 122386 columns in 521 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q7lB/nostruct-align/1q7lB.t05-thin90.a2m.gz # 1q7lB.t05-thin90.a2m with 34 sequences, total weight= 4.56574 avg weight= 0.134286 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q7lB/info/1q7lB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q7lB/nostruct-align/1q7lB.t05-thin90.a2m.gz, have 122474 columns in 522 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s95A/nostruct-align/1s95A.t05-thin90.a2m.gz # 1s95A.t05-thin90.a2m with 972 sequences, total weight= 972 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15001 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s95A/info/1s95A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s95A/nostruct-align/1s95A.t05-thin90.a2m.gz, have 122798 columns in 523 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2a0b/nostruct-align/2a0b.t05-thin90.a2m.gz # 2a0b.t05-thin90.a2m with 25 sequences, total weight= 13.3809 avg weight= 0.535236 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2a0b/info/2a0b.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2a/2a0b/nostruct-align/2a0b.t05-thin90.a2m.gz, have 122916 columns in 524 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t2dA/nostruct-align/1t2dA.t05-thin90.a2m.gz # 1t2dA.t05-thin90.a2m with 1065 sequences, total weight= 1065 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11733 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t2dA/info/1t2dA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t2dA/nostruct-align/1t2dA.t05-thin90.a2m.gz, have 123231 columns in 525 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rg8A/nostruct-align/1rg8A.t05-thin90.a2m.gz # 1rg8A.t05-thin90.a2m with 232 sequences, total weight= 86.0019 avg weight= 0.370698 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3012 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rg8A/info/1rg8A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rg8A/nostruct-align/1rg8A.t05-thin90.a2m.gz, have 123372 columns in 526 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1guqA/nostruct-align/1guqA.t05-thin90.a2m.gz # 1guqA.t05-thin90.a2m with 609 sequences, total weight= 609 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24707 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1guqA/info/1guqA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1guqA/nostruct-align/1guqA.t05-thin90.a2m.gz, have 123719 columns in 527 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1go3F/nostruct-align/1go3F.t05-thin90.a2m.gz # 1go3F.t05-thin90.a2m with 24 sequences, total weight= 18.4934 avg weight= 0.770559 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1go3F/info/1go3F.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1go3F/nostruct-align/1go3F.t05-thin90.a2m.gz, have 123826 columns in 528 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2blnA/nostruct-align/2blnA.t05-thin90.a2m.gz # 2blnA.t05-thin90.a2m with 826 sequences, total weight= 826 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28416 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2blnA/info/2blnA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2b/2blnA/nostruct-align/2blnA.t05-thin90.a2m.gz, have 124124 columns in 529 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1ju3A/nostruct-align/1ju3A.t05-thin90.a2m.gz # 1ju3A.t05-thin90.a2m with 9690 sequences, total weight= 9690 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.862196 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1ju3A/info/1ju3A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1ju3A/nostruct-align/1ju3A.t05-thin90.a2m.gz, have 124694 columns in 530 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rcqA/nostruct-align/1rcqA.t05-thin90.a2m.gz # 1rcqA.t05-thin90.a2m with 1158 sequences, total weight= 1158 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0979 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rcqA/info/1rcqA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rcqA/nostruct-align/1rcqA.t05-thin90.a2m.gz, have 125051 columns in 531 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q6oA/nostruct-align/1q6oA.t05-thin90.a2m.gz # 1q6oA.t05-thin90.a2m with 1254 sequences, total weight= 1254 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05322 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q6oA/info/1q6oA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q6oA/nostruct-align/1q6oA.t05-thin90.a2m.gz, have 125264 columns in 532 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pe9A/nostruct-align/1pe9A.t05-thin90.a2m.gz # 1pe9A.t05-thin90.a2m with 219 sequences, total weight= 219 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27222 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pe9A/info/1pe9A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pe9A/nostruct-align/1pe9A.t05-thin90.a2m.gz, have 125625 columns in 533 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2ayh/nostruct-align/2ayh.t05-thin90.a2m.gz # 2ayh.t05-thin90.a2m with 504 sequences, total weight= 504 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14977 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2ayh/info/2ayh.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2a/2ayh/nostruct-align/2ayh.t05-thin90.a2m.gz, have 125839 columns in 534 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qqqA/nostruct-align/1qqqA.t05-thin90.a2m.gz # 1qqqA.t05-thin90.a2m with 280 sequences, total weight= 44.854 avg weight= 0.160193 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qqqA/info/1qqqA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qqqA/nostruct-align/1qqqA.t05-thin90.a2m.gz, have 126103 columns in 535 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ucdA/nostruct-align/1ucdA.t05-thin90.a2m.gz # 1ucdA.t05-thin90.a2m with 545 sequences, total weight= 229.18 avg weight= 0.420513 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30969 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ucdA/info/1ucdA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ucdA/nostruct-align/1ucdA.t05-thin90.a2m.gz, have 126293 columns in 536 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xqoA/nostruct-align/1xqoA.t05-thin90.a2m.gz # 1xqoA.t05-thin90.a2m with 9 sequences, total weight= 6.55125 avg weight= 0.727916 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xqoA/info/1xqoA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xqoA/nostruct-align/1xqoA.t05-thin90.a2m.gz, have 126546 columns in 537 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w99A/nostruct-align/1w99A.t05-thin90.a2m.gz # 1w99A.t05-thin90.a2m with 125 sequences, total weight= 125 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2425 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w99A/info/1w99A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w99A/nostruct-align/1w99A.t05-thin90.a2m.gz, have 127104 columns in 538 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o6sB/nostruct-align/1o6sB.t05-thin90.a2m.gz # 1o6sB.t05-thin90.a2m with 5584 sequences, total weight= 5584 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22567 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o6sB/info/1o6sB.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o6sB/nostruct-align/1o6sB.t05-thin90.a2m.gz, have 127208 columns in 539 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jigA/nostruct-align/1jigA.t05-thin90.a2m.gz # 1jigA.t05-thin90.a2m with 363 sequences, total weight= 363 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23121 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jigA/info/1jigA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jigA/nostruct-align/1jigA.t05-thin90.a2m.gz, have 127354 columns in 540 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g8kA/nostruct-align/1g8kA.t05-thin90.a2m.gz # 1g8kA.t05-thin90.a2m with 1165 sequences, total weight= 1165 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11483 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g8kA/info/1g8kA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g8kA/nostruct-align/1g8kA.t05-thin90.a2m.gz, have 128176 columns in 541 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qwyA/nostruct-align/1qwyA.t05-thin90.a2m.gz # 1qwyA.t05-thin90.a2m with 964 sequences, total weight= 964 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08707 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qwyA/info/1qwyA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qwyA/nostruct-align/1qwyA.t05-thin90.a2m.gz, have 128410 columns in 542 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r26A/nostruct-align/1r26A.t05-thin90.a2m.gz # 1r26A.t05-thin90.a2m with 3122 sequences, total weight= 3122 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02042 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r26A/info/1r26A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r26A/nostruct-align/1r26A.t05-thin90.a2m.gz, have 128523 columns in 543 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vioA/nostruct-align/1vioA.t05-thin90.a2m.gz # 1vioA.t05-thin90.a2m with 1292 sequences, total weight= 1181.83 avg weight= 0.914727 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30239 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vioA/info/1vioA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vioA/nostruct-align/1vioA.t05-thin90.a2m.gz, have 128753 columns in 544 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i0vA/nostruct-align/1i0vA.t05-thin90.a2m.gz # 1i0vA.t05-thin90.a2m with 28 sequences, total weight= 9.17031 avg weight= 0.327511 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i0vA/info/1i0vA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i0vA/nostruct-align/1i0vA.t05-thin90.a2m.gz, have 128857 columns in 545 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3b/3bamA/nostruct-align/3bamA.t05-thin90.a2m.gz # 3bamA.t05-thin90.a2m with 3 sequences, total weight= 3 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13973 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3b/3bamA/info/3bamA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/3b/3bamA/nostruct-align/3bamA.t05-thin90.a2m.gz, have 129063 columns in 546 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iq4A/nostruct-align/1iq4A.t05-thin90.a2m.gz # 1iq4A.t05-thin90.a2m with 336 sequences, total weight= 36.8354 avg weight= 0.109629 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iq4A/info/1iq4A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iq4A/nostruct-align/1iq4A.t05-thin90.a2m.gz, have 129242 columns in 547 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gyxA/nostruct-align/1gyxA.t05-thin90.a2m.gz # 1gyxA.t05-thin90.a2m with 7 sequences, total weight= 4.68637 avg weight= 0.669481 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gyxA/info/1gyxA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gyxA/nostruct-align/1gyxA.t05-thin90.a2m.gz, have 129318 columns in 548 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o9rA/nostruct-align/1o9rA.t05-thin90.a2m.gz # 1o9rA.t05-thin90.a2m with 373 sequences, total weight= 373 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14559 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o9rA/info/1o9rA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o9rA/nostruct-align/1o9rA.t05-thin90.a2m.gz, have 129480 columns in 549 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i60A/nostruct-align/1i60A.t05-thin90.a2m.gz # 1i60A.t05-thin90.a2m with 1035 sequences, total weight= 1035 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.875422 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i60A/info/1i60A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i60A/nostruct-align/1i60A.t05-thin90.a2m.gz, have 129758 columns in 550 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t1dA/nostruct-align/1t1dA.t05-thin90.a2m.gz # 1t1dA.t05-thin90.a2m with 368 sequences, total weight= 81.4362 avg weight= 0.221294 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30493 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t1dA/info/1t1dA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t1dA/nostruct-align/1t1dA.t05-thin90.a2m.gz, have 129858 columns in 551 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kkoA/nostruct-align/1kkoA.t05-thin90.a2m.gz # 1kkoA.t05-thin90.a2m with 1086 sequences, total weight= 1086 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20302 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kkoA/info/1kkoA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kkoA/nostruct-align/1kkoA.t05-thin90.a2m.gz, have 130269 columns in 552 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bhuA/nostruct-align/2bhuA.t05-thin90.a2m.gz # 2bhuA.t05-thin90.a2m with 1924 sequences, total weight= 1924 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01282 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bhuA/info/2bhuA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/2b/2bhuA/nostruct-align/2bhuA.t05-thin90.a2m.gz, have 130849 columns in 553 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sauA/nostruct-align/1sauA.t05-thin90.a2m.gz # 1sauA.t05-thin90.a2m with 71 sequences, total weight= 15.7499 avg weight= 0.22183 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sauA/info/1sauA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sauA/nostruct-align/1sauA.t05-thin90.a2m.gz, have 130963 columns in 554 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r4pA/nostruct-align/1r4pA.t05-thin90.a2m.gz # 1r4pA.t05-thin90.a2m with 148 sequences, total weight= 148 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18408 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r4pA/info/1r4pA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r4pA/nostruct-align/1r4pA.t05-thin90.a2m.gz, have 131244 columns in 555 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s1dA/nostruct-align/1s1dA.t05-thin90.a2m.gz # 1s1dA.t05-thin90.a2m with 33 sequences, total weight= 10.771 avg weight= 0.326393 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s1dA/info/1s1dA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s1dA/nostruct-align/1s1dA.t05-thin90.a2m.gz, have 131561 columns in 556 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y81A/nostruct-align/1y81A.t05-thin90.a2m.gz # 1y81A.t05-thin90.a2m with 379 sequences, total weight= 71.9806 avg weight= 0.189922 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30169 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y81A/info/1y81A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1y81A/nostruct-align/1y81A.t05-thin90.a2m.gz, have 131677 columns in 557 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gca/nostruct-align/1gca.t05-thin90.a2m.gz # 1gca.t05-thin90.a2m with 2039 sequences, total weight= 2039 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.915209 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gca/info/1gca.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gca/nostruct-align/1gca.t05-thin90.a2m.gz, have 131986 columns in 558 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3e/3eipA/nostruct-align/3eipA.t05-thin90.a2m.gz # 3eipA.t05-thin90.a2m with 7 sequences, total weight= 2.32939 avg weight= 0.33277 11 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3e/3eipA/info/3eipA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/3e/3eipA/nostruct-align/3eipA.t05-thin90.a2m.gz, have 132070 columns in 559 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vlaA/nostruct-align/1vlaA.t05-thin90.a2m.gz # 1vlaA.t05-thin90.a2m with 458 sequences, total weight= 458 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11421 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vlaA/info/1vlaA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vlaA/nostruct-align/1vlaA.t05-thin90.a2m.gz, have 132214 columns in 560 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mfmA/nostruct-align/1mfmA.t05-thin90.a2m.gz # 1mfmA.t05-thin90.a2m with 435 sequences, total weight= 73.711 avg weight= 0.169451 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30147 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mfmA/info/1mfmA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mfmA/nostruct-align/1mfmA.t05-thin90.a2m.gz, have 132367 columns in 561 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1ks9A/nostruct-align/1ks9A.t05-thin90.a2m.gz # 1ks9A.t05-thin90.a2m with 5682 sequences, total weight= 5682 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.805502 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1ks9A/info/1ks9A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1k/1ks9A/nostruct-align/1ks9A.t05-thin90.a2m.gz, have 132658 columns in 562 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1whi/nostruct-align/1whi.t05-thin90.a2m.gz # 1whi.t05-thin90.a2m with 287 sequences, total weight= 18.8671 avg weight= 0.0657389 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1whi/info/1whi.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1w/1whi/nostruct-align/1whi.t05-thin90.a2m.gz, have 132780 columns in 563 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1ayl/nostruct-align/1ayl.t05-thin90.a2m.gz # 1ayl.t05-thin90.a2m with 326 sequences, total weight= 123.464 avg weight= 0.378723 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30098 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1ayl/info/1ayl.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1a/1ayl/nostruct-align/1ayl.t05-thin90.a2m.gz, have 133312 columns in 564 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vns/nostruct-align/1vns.t05-thin90.a2m.gz # 1vns.t05-thin90.a2m with 42 sequences, total weight= 42 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19276 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vns/info/1vns.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vns/nostruct-align/1vns.t05-thin90.a2m.gz, have 133886 columns in 565 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q1fA/nostruct-align/1q1fA.t05-thin90.a2m.gz # 1q1fA.t05-thin90.a2m with 998 sequences, total weight= 998 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18304 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q1fA/info/1q1fA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q1fA/nostruct-align/1q1fA.t05-thin90.a2m.gz, have 134034 columns in 566 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/5n/5nul/nostruct-align/5nul.t05-thin90.a2m.gz # 5nul.t05-thin90.a2m with 1057 sequences, total weight= 1057 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04306 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/5n/5nul/info/5nul.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/5n/5nul/nostruct-align/5nul.t05-thin90.a2m.gz, have 134172 columns in 567 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fiuA/nostruct-align/1fiuA.t05-thin90.a2m.gz # 1fiuA.t05-thin90.a2m with 4 sequences, total weight= 2.86134 avg weight= 0.715334 10 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fiuA/info/1fiuA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fiuA/nostruct-align/1fiuA.t05-thin90.a2m.gz, have 134458 columns in 568 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pfvA/nostruct-align/1pfvA.t05-thin90.a2m.gz # 1pfvA.t05-thin90.a2m with 2581 sequences, total weight= 2581 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01945 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pfvA/info/1pfvA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pfvA/nostruct-align/1pfvA.t05-thin90.a2m.gz, have 135005 columns in 569 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1orc/nostruct-align/1orc.t05-thin90.a2m.gz # 1orc.t05-thin90.a2m with 5 sequences, total weight= 3.58842 avg weight= 0.717684 12 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1orc/info/1orc.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1orc/nostruct-align/1orc.t05-thin90.a2m.gz, have 135069 columns in 570 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mhnA/nostruct-align/1mhnA.t05-thin90.a2m.gz # 1mhnA.t05-thin90.a2m with 56 sequences, total weight= 18.8781 avg weight= 0.33711 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mhnA/info/1mhnA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mhnA/nostruct-align/1mhnA.t05-thin90.a2m.gz, have 135128 columns in 571 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1csh/nostruct-align/1csh.t05-thin90.a2m.gz # 1csh.t05-thin90.a2m with 497 sequences, total weight= 121.081 avg weight= 0.243623 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3033 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1csh/info/1csh.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1c/1csh/nostruct-align/1csh.t05-thin90.a2m.gz, have 135563 columns in 572 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t1jA/nostruct-align/1t1jA.t05-thin90.a2m.gz # 1t1jA.t05-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26604 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t1jA/info/1t1jA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t1jA/nostruct-align/1t1jA.t05-thin90.a2m.gz, have 135682 columns in 573 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rl0A/nostruct-align/1rl0A.t05-thin90.a2m.gz # 1rl0A.t05-thin90.a2m with 144 sequences, total weight= 144 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24279 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rl0A/info/1rl0A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rl0A/nostruct-align/1rl0A.t05-thin90.a2m.gz, have 135937 columns in 574 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d2nA/nostruct-align/1d2nA.t05-thin90.a2m.gz # 1d2nA.t05-thin90.a2m with 8081 sequences, total weight= 8081 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.905323 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d2nA/info/1d2nA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d2nA/nostruct-align/1d2nA.t05-thin90.a2m.gz, have 136183 columns in 575 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e4cP/nostruct-align/1e4cP.t05-thin90.a2m.gz # 1e4cP.t05-thin90.a2m with 480 sequences, total weight= 480 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18919 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e4cP/info/1e4cP.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e4cP/nostruct-align/1e4cP.t05-thin90.a2m.gz, have 136389 columns in 576 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ogqA/nostruct-align/1ogqA.t05-thin90.a2m.gz # 1ogqA.t05-thin90.a2m with 7207 sequences, total weight= 7207 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.968058 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ogqA/info/1ogqA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ogqA/nostruct-align/1ogqA.t05-thin90.a2m.gz, have 136702 columns in 577 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v6sA/nostruct-align/1v6sA.t05-thin90.a2m.gz # 1v6sA.t05-thin90.a2m with 402 sequences, total weight= 16.0319 avg weight= 0.0398803 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v6sA/info/1v6sA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v6sA/nostruct-align/1v6sA.t05-thin90.a2m.gz, have 137092 columns in 578 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1njhA/nostruct-align/1njhA.t05-thin90.a2m.gz # 1njhA.t05-thin90.a2m with 13 sequences, total weight= 3.43668 avg weight= 0.26436 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1njhA/info/1njhA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1n/1njhA/nostruct-align/1njhA.t05-thin90.a2m.gz, have 137200 columns in 579 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xfsA/nostruct-align/1xfsA.t05-thin90.a2m.gz # 1xfsA.t05-thin90.a2m with 670 sequences, total weight= 670 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.829083 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xfsA/info/1xfsA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xfsA/nostruct-align/1xfsA.t05-thin90.a2m.gz, have 137354 columns in 580 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vr9A/nostruct-align/1vr9A.t05-thin90.a2m.gz # 1vr9A.t05-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.86108 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vr9A/info/1vr9A.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vr9A/nostruct-align/1vr9A.t05-thin90.a2m.gz, have 137475 columns in 581 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sfxA/nostruct-align/1sfxA.t05-thin90.a2m.gz # 1sfxA.t05-thin90.a2m with 68 sequences, total weight= 68 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2686 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sfxA/info/1sfxA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sfxA/nostruct-align/1sfxA.t05-thin90.a2m.gz, have 137584 columns in 582 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vhsA/nostruct-align/1vhsA.t05-thin90.a2m.gz # 1vhsA.t05-thin90.a2m with 5905 sequences, total weight= 5905 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.758755 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vhsA/info/1vhsA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vhsA/nostruct-align/1vhsA.t05-thin90.a2m.gz, have 137749 columns in 583 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1muwA/nostruct-align/1muwA.t05-thin90.a2m.gz # 1muwA.t05-thin90.a2m with 827 sequences, total weight= 827 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04502 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1muwA/info/1muwA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1m/1muwA/nostruct-align/1muwA.t05-thin90.a2m.gz, have 138135 columns in 584 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rhcA/nostruct-align/1rhcA.t05-thin90.a2m.gz # 1rhcA.t05-thin90.a2m with 1008 sequences, total weight= 1008 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10032 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rhcA/info/1rhcA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rhcA/nostruct-align/1rhcA.t05-thin90.a2m.gz, have 138465 columns in 585 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1orvA/nostruct-align/1orvA.t05-thin90.a2m.gz # 1orvA.t05-thin90.a2m with 7505 sequences, total weight= 7505 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.830014 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1orvA/info/1orvA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1o/1orvA/nostruct-align/1orvA.t05-thin90.a2m.gz, have 139193 columns in 586 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vbiA/nostruct-align/1vbiA.t05-thin90.a2m.gz # 1vbiA.t05-thin90.a2m with 141 sequences, total weight= 40.7127 avg weight= 0.288743 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vbiA/info/1vbiA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vbiA/nostruct-align/1vbiA.t05-thin90.a2m.gz, have 139533 columns in 587 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yiiA/nostruct-align/1yiiA.t05-thin90.a2m.gz # 1yiiA.t05-thin90.a2m with 327 sequences, total weight= 94.686 avg weight= 0.28956 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30132 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yiiA/info/1yiiA.stride-mixed.o_notor2 # After reading /projects/compbio/experiments/models.97/pdb/1y/1yiiA/nostruct-align/1yiiA.t05-thin90.a2m.gz, have 139849 columns in 588 chains # command:CPU_time= 9636.09 sec, elapsed time= 9759.53 sec) # command:# ReportNetQualityForCrossTrainTo quality-reports/dunbrack-30pc-1763-t05-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-o_notor2-from-empty.train ok. # command:# Training Net with 5 estimation cycles. Epoch: 1 2.84984 cross_bits=2.71056 objective=0.348616 new best Epoch: 2 2.67753 cross_bits=2.67663 objective=0.382544 new best Epoch: 3 2.6614 cross_bits=2.67025 objective=0.388921 new best, reshuffling Epoch: 4 2.65821 cross_bits=2.67231 objective=0.386865 worse network accepted, reshuffling Epoch: 5 2.65645 cross_bits=2.66518 objective=0.393993 new best # Network initialization done # command:# ReportNeuralNet networks/dunbrack-30pc-1763-t05-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-o_notor2-from-empty.net ok. # Network initialization done # Neural network printed. # command:CPU_time= 10310.9 sec, elapsed time= 10442.3 sec) # command:# Network initialization done # command:Equilibrating dunbrack-30pc-1763-t05-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-o_notor2-from-empty.net # command:# Training Net with 5 estimation cycles. Epoch: 6 2.65067 cross_bits=2.65807 objective=0.401098 new best Epoch: 7 2.64094 cross_bits=2.64128 objective=0.429916 new best Epoch: 8 2.60344 cross_bits=2.57953 objective=0.591664 new best Epoch: 9 2.52812 cross_bits=2.49378 objective=0.735897 new best Epoch: 10 2.45218 cross_bits=2.42842 objective=0.830481 new best # Network initialization done # command:# ReportNeuralNet networks/dunbrack-30pc-1763-t05-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-o_notor2-from-empty.net ok. # Network initialization done # Neural network printed. # command:CPU_time= 11032.2 sec, elapsed time= 11170.7 sec) # command:# Network initialization done # command:Equilibrating dunbrack-30pc-1763-t05-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-o_notor2-from-empty.net # command:# Training Net with 5 estimation cycles. Epoch: 11 2.43094 cross_bits=2.41739 objective=0.846421 new best Epoch: 12 2.39946 cross_bits=2.39314 objective=0.876937 new best Epoch: 13 2.3785 cross_bits=2.37473 objective=0.90058 new best Epoch: 14 2.3606 cross_bits=2.35802 objective=0.92136 new best Epoch: 15 2.34293 cross_bits=2.34114 objective=0.941868 new best # Network initialization done # command:# ReportNeuralNet networks/dunbrack-30pc-1763-t05-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-o_notor2-from-empty.net ok. # Network initialization done # Neural network printed. # command:CPU_time= 11753.3 sec, elapsed time= 11894.1 sec) # command:# Network initialization done # command:Equilibrating dunbrack-30pc-1763-t05-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-o_notor2-from-empty.net # command:# Training Net with 5 estimation cycles. Epoch: 16 2.33525 cross_bits=2.33276 objective=0.944746 new best Epoch: 17 2.31292 cross_bits=2.31273 objective=0.969883 new best Epoch: 18 2.29253 cross_bits=2.29369 objective=0.99205 new best Epoch: 19 2.27397 cross_bits=2.27644 objective=1.0114 new best Epoch: 20 2.25767 cross_bits=2.26132 objective=1.02802 new best, reshuffling # Network initialization done # command:# ReportNeuralNet networks/dunbrack-30pc-1763-t05-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-o_notor2-from-empty.net ok. # Network initialization done # Neural network printed. # command:CPU_time= 12474.6 sec, elapsed time= 12617.5 sec) # command:# Network initialization done # command:Equilibrating dunbrack-30pc-1763-t05-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-o_notor2-from-empty.net # command:# Training Net with 50 estimation cycles. Epoch: 21 2.24689 cross_bits=2.24768 objective=1.04315 new best Epoch: 22 2.23096 cross_bits=2.23348 objective=1.05984 new best Epoch: 23 2.21766 cross_bits=2.22026 objective=1.07653 new best Epoch: 24 2.20458 cross_bits=2.20667 objective=1.09335 new best Epoch: 25 2.19062 cross_bits=2.19155 objective=1.11345 new best Epoch: 26 2.1747 cross_bits=2.1737 objective=1.1397 new best, reshuffling Epoch: 27 2.15598 cross_bits=2.1534 objective=1.17062 new best Epoch: 28 2.13666 cross_bits=2.13389 objective=1.20127 new best Epoch: 29 2.11924 cross_bits=2.11796 objective=1.22335 new best Epoch: 30 2.10488 cross_bits=2.10545 objective=1.24048 new best Epoch: 31 2.0931 cross_bits=2.09544 objective=1.25336 new best Epoch: 32 2.08317 cross_bits=2.08709 objective=1.26439 new best Epoch: 33 2.07455 cross_bits=2.07986 objective=1.27358 new best Epoch: 34 2.06688 cross_bits=2.07343 objective=1.28213 new best Epoch: 35 2.05993 cross_bits=2.06761 objective=1.29028 new best Epoch: 36 2.05356 cross_bits=2.06229 objective=1.29707 new best Epoch: 37 2.04768 cross_bits=2.05741 objective=1.30353 new best Epoch: 38 2.04224 cross_bits=2.05291 objective=1.3092 new best Epoch: 39 2.03717 cross_bits=2.04874 objective=1.31412 new best Epoch: 40 2.03243 cross_bits=2.04485 objective=1.31934 new best Epoch: 41 2.02795 cross_bits=2.04119 objective=1.32382 new best Epoch: 42 2.02371 cross_bits=2.03773 objective=1.32825 new best Epoch: 43 2.01966 cross_bits=2.03443 objective=1.33236 new best Epoch: 44 2.01578 cross_bits=2.03128 objective=1.33619 new best Epoch: 45 2.01205 cross_bits=2.02825 objective=1.34037 new best Epoch: 46 2.00846 cross_bits=2.02535 objective=1.3443 new best, reshuffling Epoch: 47 2.00414 cross_bits=2.02546 objective=1.33797 worse network rejected, reshuffling Epoch: 48 2.00552 cross_bits=2.02542 objective=1.342 worse network accepted, reshuffling Epoch: 49 2.00214 cross_bits=2.02101 objective=1.34672 new best Epoch: 50 1.99908 cross_bits=2.01838 objective=1.35 new best Epoch: 51 1.99596 cross_bits=2.01586 objective=1.35331 new best Epoch: 52 1.99297 cross_bits=2.01345 objective=1.35653 new best Epoch: 53 1.99009 cross_bits=2.01115 objective=1.35987 new best Epoch: 54 1.98733 cross_bits=2.00893 objective=1.36353 new best Epoch: 55 1.98468 cross_bits=2.0068 objective=1.36644 new best Epoch: 56 1.98213 cross_bits=2.00476 objective=1.36933 new best Epoch: 57 1.97968 cross_bits=2.0028 objective=1.37224 new best Epoch: 58 1.97732 cross_bits=2.00091 objective=1.3751 new best Epoch: 59 1.97505 cross_bits=1.9991 objective=1.37764 new best, reshuffling Epoch: 60 1.97428 cross_bits=2.01683 objective=1.35329 worse network rejected, reshuffling Epoch: 61 1.97352 cross_bits=1.99822 objective=1.37507 worse network accepted, reshuffling Epoch: 62 1.971 cross_bits=1.99529 objective=1.3821 new best Epoch: 63 1.96893 cross_bits=1.99374 objective=1.38459 new best Epoch: 64 1.96698 cross_bits=1.99222 objective=1.38708 new best Epoch: 65 1.96509 cross_bits=1.99074 objective=1.38925 new best Epoch: 66 1.96325 cross_bits=1.98931 objective=1.39126 new best Epoch: 67 1.96148 cross_bits=1.98792 objective=1.39314 new best Epoch: 68 1.95975 cross_bits=1.98657 objective=1.39526 new best Epoch: 69 1.95808 cross_bits=1.98526 objective=1.39701 new best Epoch: 70 1.95645 cross_bits=1.984 objective=1.399 new best # Network initialization done # command:# ReportNeuralNet networks/dunbrack-30pc-1763-t05-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-o_notor2-from-empty.net ok. # Network initialization done # Neural network printed. # command:CPU_time= 18853 sec, elapsed time= 19009.7 sec) # command:# Network initialization done # command:# Training Net with 50 estimation cycles. Epoch: 71 1.9539 cross_bits=1.98371 objective=1.40085 new best Epoch: 72 1.95252 cross_bits=1.98248 objective=1.40252 new best Epoch: 73 1.95101 cross_bits=1.98127 objective=1.40428 new best Epoch: 74 1.94954 cross_bits=1.9801 objective=1.40624 new best Epoch: 75 1.94809 cross_bits=1.97897 objective=1.40782 new best Epoch: 76 1.94669 cross_bits=1.97786 objective=1.40965 new best Epoch: 77 1.94531 cross_bits=1.97679 objective=1.41159 new best, reshuffling Epoch: 78 1.9442 cross_bits=1.97656 objective=1.41203 new best Epoch: 79 1.9428 cross_bits=1.97557 objective=1.41363 new best Epoch: 80 1.94149 cross_bits=1.97458 objective=1.41531 new best Epoch: 81 1.94022 cross_bits=1.9736 objective=1.41698 new best Epoch: 82 1.93898 cross_bits=1.97264 objective=1.41856 new best Epoch: 83 1.93777 cross_bits=1.9717 objective=1.42029 new best Epoch: 84 1.93659 cross_bits=1.97079 objective=1.42151 new best Epoch: 85 1.93542 cross_bits=1.96989 objective=1.42281 new best Epoch: 86 1.93429 cross_bits=1.96901 objective=1.42409 new best Epoch: 87 1.93317 cross_bits=1.96814 objective=1.42548 new best, reshuffling Epoch: 88 1.93169 cross_bits=1.96729 objective=1.42478 worse network accepted, reshuffling Epoch: 89 1.93087 cross_bits=1.96597 objective=1.43064 new best Epoch: 90 1.92988 cross_bits=1.96515 objective=1.43203 new best, reshuffling Epoch: 91 1.9298 cross_bits=1.96316 objective=1.43498 new best Epoch: 92 1.92873 cross_bits=1.96248 objective=1.43622 new best Epoch: 93 1.9277 cross_bits=1.96176 objective=1.43736 new best Epoch: 94 1.92667 cross_bits=1.96103 objective=1.4385 new best Epoch: 95 1.92566 cross_bits=1.96031 objective=1.43981 new best Epoch: 96 1.92467 cross_bits=1.95959 objective=1.44124 new best Epoch: 97 1.9237 cross_bits=1.95887 objective=1.44228 new best Epoch: 98 1.92274 cross_bits=1.95817 objective=1.44371 new best Epoch: 99 1.9218 cross_bits=1.95748 objective=1.44489 new best Epoch: 100 1.92087 cross_bits=1.95679 objective=1.44602 new best Epoch: 101 1.91995 cross_bits=1.95612 objective=1.44731 new best Epoch: 102 1.91905 cross_bits=1.95545 objective=1.44843 new best Epoch: 103 1.91815 cross_bits=1.95479 objective=1.44954 new best Epoch: 104 1.91727 cross_bits=1.95415 objective=1.45069 new best Epoch: 105 1.9164 cross_bits=1.95351 objective=1.45192 new best, reshuffling Epoch: 106 1.91607 cross_bits=1.95191 objective=1.45323 new best Epoch: 107 1.91521 cross_bits=1.95125 objective=1.45438 new best Epoch: 108 1.91438 cross_bits=1.95062 objective=1.45507 new best Epoch: 109 1.91356 cross_bits=1.95 objective=1.45568 new best Epoch: 110 1.91275 cross_bits=1.9494 objective=1.45685 new best Epoch: 111 1.91195 cross_bits=1.94881 objective=1.45795 new best Epoch: 112 1.91116 cross_bits=1.94823 objective=1.45865 new best, reshuffling Epoch: 113 1.90934 cross_bits=1.94766 objective=1.45745 worse network accepted, reshuffling Epoch: 114 1.90845 cross_bits=1.95127 objective=1.45429 worse network accepted, reshuffling Epoch: 115 1.90807 cross_bits=1.9469 objective=1.45902 new best Epoch: 116 1.9072 cross_bits=1.94636 objective=1.4599 new best Epoch: 117 1.90646 cross_bits=1.94581 objective=1.46074 new best Epoch: 118 1.90572 cross_bits=1.94526 objective=1.4615 new best Epoch: 119 1.90499 cross_bits=1.94472 objective=1.46219 new best Epoch: 120 1.90427 cross_bits=1.94418 objective=1.46285 new best # Network initialization done # command:# ReportNeuralNet networks/dunbrack-30pc-1763-t05-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-o_notor2-from-empty.net ok. # Network initialization done # Neural network printed. # command:CPU_time= 25194.4 sec, elapsed time= 25384.9 sec) # command:# ReportNetQualityForTestTo quality-reports/dunbrack-30pc-1763-t05-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-o_notor2-from-empty.120.test ok. # command:# Testing net dunbrack-30pc-1763-t05-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-o_notor2-from-empty.net # Network initialization done # command:# Network initialization done # command:Equilibrating dunbrack-30pc-1763-t05-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-o_notor2-from-empty.net # command:# Training Net with 50 estimation cycles. Epoch: 121 1.96086 cross_bits=1.98944 objective=1.40642 new best Epoch: 122 1.93972 cross_bits=1.978 objective=1.42059 new best Epoch: 123 1.93064 cross_bits=1.9713 objective=1.42893 new best Epoch: 124 1.92481 cross_bits=1.96671 objective=1.43487 new best Epoch: 125 1.92059 cross_bits=1.96329 objective=1.43935 new best Epoch: 126 1.91731 cross_bits=1.96056 objective=1.4428 new best Epoch: 127 1.91463 cross_bits=1.9583 objective=1.44609 new best Epoch: 128 1.91236 cross_bits=1.95636 objective=1.44865 new best Epoch: 129 1.91037 cross_bits=1.95466 objective=1.4512 new best Epoch: 130 1.9086 cross_bits=1.95314 objective=1.45329 new best Epoch: 131 1.90699 cross_bits=1.95175 objective=1.45533 new best Epoch: 132 1.90552 cross_bits=1.95049 objective=1.45701 new best Epoch: 133 1.90415 cross_bits=1.94931 objective=1.45888 new best Epoch: 134 1.90286 cross_bits=1.94822 objective=1.46 new best Epoch: 135 1.90165 cross_bits=1.9472 objective=1.46124 new best Epoch: 136 1.9005 cross_bits=1.94623 objective=1.4626 new best Epoch: 137 1.89941 cross_bits=1.94531 objective=1.46382 new best Epoch: 138 1.89836 cross_bits=1.94444 objective=1.46524 new best Epoch: 139 1.89736 cross_bits=1.94361 objective=1.46677 new best Epoch: 140 1.89639 cross_bits=1.94283 objective=1.46792 new best, reshuffling Epoch: 141 1.89778 cross_bits=1.9388 objective=1.47234 new best Epoch: 142 1.89677 cross_bits=1.93794 objective=1.47365 new best Epoch: 143 1.89587 cross_bits=1.93717 objective=1.47455 new best Epoch: 144 1.89499 cross_bits=1.93644 objective=1.47575 new best Epoch: 145 1.89414 cross_bits=1.93575 objective=1.47664 new best Epoch: 146 1.89331 cross_bits=1.93507 objective=1.47763 new best Epoch: 147 1.89251 cross_bits=1.93442 objective=1.47881 new best Epoch: 148 1.89172 cross_bits=1.93379 objective=1.47973 new best Epoch: 149 1.89096 cross_bits=1.93318 objective=1.48064 new best Epoch: 150 1.89021 cross_bits=1.93258 objective=1.48147 new best Epoch: 151 1.88947 cross_bits=1.932 objective=1.48227 new best, reshuffling Epoch: 152 1.8873 cross_bits=1.93169 objective=1.48457 new best Epoch: 153 1.8867 cross_bits=1.93114 objective=1.48559 new best Epoch: 154 1.88603 cross_bits=1.93059 objective=1.48632 new best Epoch: 155 1.88538 cross_bits=1.93004 objective=1.48711 new best Epoch: 156 1.88473 cross_bits=1.9295 objective=1.4879 new best Epoch: 157 1.88409 cross_bits=1.92897 objective=1.48881 new best Epoch: 158 1.88347 cross_bits=1.92846 objective=1.48958 new best Epoch: 159 1.88285 cross_bits=1.92795 objective=1.49024 new best Epoch: 160 1.88225 cross_bits=1.92746 objective=1.49086 new best Epoch: 161 1.88166 cross_bits=1.92698 objective=1.49156 new best Epoch: 162 1.88108 cross_bits=1.92651 objective=1.49216 new best Epoch: 163 1.8805 cross_bits=1.92605 objective=1.49273 new best Epoch: 164 1.87994 cross_bits=1.92559 objective=1.49356 new best Epoch: 165 1.87938 cross_bits=1.92515 objective=1.49439 new best Epoch: 166 1.87884 cross_bits=1.92471 objective=1.49504 new best Epoch: 167 1.8783 cross_bits=1.92429 objective=1.49578 new best Epoch: 168 1.87777 cross_bits=1.92386 objective=1.49637 new best Epoch: 169 1.87725 cross_bits=1.92345 objective=1.49684 new best Epoch: 170 1.87674 cross_bits=1.92305 objective=1.49716 new best, reshuffling # Network initialization done # command:# ReportNeuralNet networks/dunbrack-30pc-1763-t05-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-o_notor2-from-empty.net ok. # Network initialization done # Neural network printed. # command:CPU_time= 31721.6 sec, elapsed time= 31919.8 sec) # command:# Network initialization done # command:# Training Net with 50 estimation cycles. Epoch: 171 1.87742 cross_bits=1.92847 objective=1.49249 worse network accepted, reshuffling Epoch: 172 1.87682 cross_bits=1.92218 objective=1.49796 new best Epoch: 173 1.87637 cross_bits=1.92182 objective=1.4986 new best Epoch: 174 1.87586 cross_bits=1.92146 objective=1.4991 new best Epoch: 175 1.87536 cross_bits=1.92111 objective=1.49973 new best Epoch: 176 1.87486 cross_bits=1.92077 objective=1.50036 new best Epoch: 177 1.87438 cross_bits=1.92043 objective=1.50085 new best, reshuffling Epoch: 178 1.87399 cross_bits=1.92017 objective=1.50243 new best Epoch: 179 1.87356 cross_bits=1.91986 objective=1.50297 new best Epoch: 180 1.87311 cross_bits=1.91954 objective=1.50336 new best Epoch: 181 1.87266 cross_bits=1.91922 objective=1.50392 new best, reshuffling Epoch: 182 1.87204 cross_bits=1.92119 objective=1.50198 worse network rejected, reshuffling Epoch: 183 1.87225 cross_bits=1.9192 objective=1.50273 worse network rejected, reshuffling Epoch: 184 1.87194 cross_bits=1.91948 objective=1.50385 worse network accepted, reshuffling Epoch: 185 1.87171 cross_bits=1.91877 objective=1.50252 worse network accepted, reshuffling Epoch: 186 1.87149 cross_bits=1.91932 objective=1.50138 worse network rejected, reshuffling Epoch: 187 1.87138 cross_bits=1.92103 objective=1.49922 worse network accepted, reshuffling Epoch: 188 1.87089 cross_bits=1.91827 objective=1.50478 new best Epoch: 189 1.87041 cross_bits=1.91802 objective=1.50511 new best, reshuffling Epoch: 190 1.86987 cross_bits=1.92637 objective=1.4966 worse network rejected, reshuffling Epoch: 191 1.86985 cross_bits=1.91766 objective=1.50415 worse network accepted, reshuffling Epoch: 192 1.86869 cross_bits=1.91759 objective=1.50634 new best Epoch: 193 1.86832 cross_bits=1.91731 objective=1.50655 new best Epoch: 194 1.86794 cross_bits=1.91704 objective=1.50685 new best Epoch: 195 1.86757 cross_bits=1.91678 objective=1.50725 new best Epoch: 196 1.86721 cross_bits=1.91652 objective=1.50761 new best Epoch: 197 1.86685 cross_bits=1.91626 objective=1.50802 new best Epoch: 198 1.86649 cross_bits=1.91601 objective=1.5084 new best Epoch: 199 1.86614 cross_bits=1.91576 objective=1.50888 new best Epoch: 200 1.86579 cross_bits=1.91551 objective=1.50917 new best Epoch: 201 1.86545 cross_bits=1.91526 objective=1.50964 new best Epoch: 202 1.86511 cross_bits=1.91502 objective=1.51005 new best Epoch: 203 1.86478 cross_bits=1.91479 objective=1.51039 new best Epoch: 204 1.86445 cross_bits=1.91455 objective=1.51076 new best Epoch: 205 1.86412 cross_bits=1.91432 objective=1.51102 new best Epoch: 206 1.8638 cross_bits=1.91409 objective=1.51139 new best Epoch: 207 1.86348 cross_bits=1.91387 objective=1.51168 new best Epoch: 208 1.86317 cross_bits=1.91365 objective=1.512 new best Epoch: 209 1.86286 cross_bits=1.91343 objective=1.51211 new best Epoch: 210 1.86256 cross_bits=1.91321 objective=1.51256 new best, reshuffling Epoch: 211 1.86258 cross_bits=1.91542 objective=1.51027 worse network accepted, reshuffling Epoch: 212 1.86295 cross_bits=1.91217 objective=1.51221 improvement accepted Epoch: 213 1.86261 cross_bits=1.91194 objective=1.51251 improvement accepted, reshuffling Epoch: 214 1.86139 cross_bits=1.91613 objective=1.50569 worse network rejected, reshuffling Epoch: 215 1.86245 cross_bits=1.91233 objective=1.51126 worse network rejected, reshuffling Epoch: 216 1.86208 cross_bits=1.91179 objective=1.51399 new best Epoch: 217 1.86182 cross_bits=1.91163 objective=1.51432 new best Epoch: 218 1.86153 cross_bits=1.91145 objective=1.51457 new best Epoch: 219 1.86124 cross_bits=1.91126 objective=1.51485 new best Epoch: 220 1.86096 cross_bits=1.91107 objective=1.51518 new best # Network initialization done # command:# ReportNeuralNet networks/dunbrack-30pc-1763-t05-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-o_notor2-from-empty.net ok. # Network initialization done # Neural network printed. # command:CPU_time= 38061.2 sec, elapsed time= 38266.3 sec) # command:# ReportNetQualityForTestTo quality-reports/dunbrack-30pc-1763-t05-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-o_notor2-from-empty.220.test ok. # command:# Testing net dunbrack-30pc-1763-t05-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-o_notor2-from-empty.net # Network initialization done # command:# Network initialization done # command:Equilibrating dunbrack-30pc-1763-t05-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-o_notor2-from-empty.net # command:# Training Net with 50 estimation cycles. Epoch: 221 1.87506 cross_bits=1.92577 objective=1.48877 new best Epoch: 222 1.87242 cross_bits=1.92462 objective=1.49071 new best, reshuffling Epoch: 223 1.87139 cross_bits=1.92095 objective=1.50009 new best Epoch: 224 1.87028 cross_bits=1.92027 objective=1.50133 new best, reshuffling Epoch: 225 1.86885 cross_bits=1.91864 objective=1.50266 new best Epoch: 226 1.86816 cross_bits=1.9181 objective=1.50327 new best Epoch: 227 1.86756 cross_bits=1.91762 objective=1.50401 new best Epoch: 228 1.86699 cross_bits=1.91717 objective=1.50461 new best Epoch: 229 1.86647 cross_bits=1.91676 objective=1.50516 new best Epoch: 230 1.86598 cross_bits=1.91637 objective=1.50594 new best Epoch: 231 1.86552 cross_bits=1.91601 objective=1.50638 new best Epoch: 232 1.86509 cross_bits=1.91566 objective=1.50689 new best Epoch: 233 1.86467 cross_bits=1.91534 objective=1.50744 new best Epoch: 234 1.86427 cross_bits=1.91502 objective=1.50772 new best Epoch: 235 1.86389 cross_bits=1.91472 objective=1.50818 new best Epoch: 236 1.86352 cross_bits=1.91444 objective=1.50846 new best Epoch: 237 1.86316 cross_bits=1.91416 objective=1.50864 new best Epoch: 238 1.86281 cross_bits=1.91389 objective=1.50895 new best Epoch: 239 1.86248 cross_bits=1.91364 objective=1.50924 new best Epoch: 240 1.86215 cross_bits=1.91339 objective=1.50962 new best Epoch: 241 1.86183 cross_bits=1.91315 objective=1.51 new best Epoch: 242 1.86152 cross_bits=1.91291 objective=1.51028 new best Epoch: 243 1.86122 cross_bits=1.91268 objective=1.51066 new best Epoch: 244 1.86092 cross_bits=1.91246 objective=1.51089 new best Epoch: 245 1.86063 cross_bits=1.91225 objective=1.5112 new best Epoch: 246 1.86035 cross_bits=1.91203 objective=1.51149 new best Epoch: 247 1.86007 cross_bits=1.91183 objective=1.51176 new best Epoch: 248 1.8598 cross_bits=1.91163 objective=1.51206 new best Epoch: 249 1.85953 cross_bits=1.91143 objective=1.51243 new best Epoch: 250 1.85926 cross_bits=1.91124 objective=1.51268 new best Epoch: 251 1.85901 cross_bits=1.91105 objective=1.51292 new best Epoch: 252 1.85875 cross_bits=1.91087 objective=1.51329 new best Epoch: 253 1.8585 cross_bits=1.91069 objective=1.51343 new best Epoch: 254 1.85826 cross_bits=1.91052 objective=1.51359 new best Epoch: 255 1.85801 cross_bits=1.91034 objective=1.51383 new best Epoch: 256 1.85778 cross_bits=1.91018 objective=1.51422 new best, reshuffling Epoch: 257 1.85755 cross_bits=1.91099 objective=1.51606 new best Epoch: 258 1.85729 cross_bits=1.91083 objective=1.51627 new best Epoch: 259 1.85705 cross_bits=1.91066 objective=1.51649 new best Epoch: 260 1.85682 cross_bits=1.91049 objective=1.51674 new best Epoch: 261 1.85659 cross_bits=1.91033 objective=1.51699 new best Epoch: 262 1.85636 cross_bits=1.91017 objective=1.51737 new best Epoch: 263 1.85614 cross_bits=1.91001 objective=1.51755 new best Epoch: 264 1.85592 cross_bits=1.90986 objective=1.51785 new best Epoch: 265 1.85571 cross_bits=1.90971 objective=1.51805 new best Epoch: 266 1.8555 cross_bits=1.90956 objective=1.51822 new best Epoch: 267 1.85529 cross_bits=1.90942 objective=1.51857 new best Epoch: 268 1.85508 cross_bits=1.90928 objective=1.51887 new best, reshuffling Epoch: 269 1.85477 cross_bits=1.90875 objective=1.51572 worse network rejected, reshuffling Epoch: 270 1.85537 cross_bits=1.90923 objective=1.51808 reset to old best (1.51887), reshuffling # Network initialization done # command:# ReportNeuralNet networks/dunbrack-30pc-1763-t05-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-o_notor2-from-empty.net ok. # Network initialization done # Neural network printed. # command:CPU_time= 44590.9 sec, elapsed time= 44802.4 sec) # command:# Network initialization done # command:# Training Net with 50 estimation cycles. Epoch: 271 1.85482 cross_bits=1.90854 objective=1.51772 worse network accepted, reshuffling Epoch: 272 1.855 cross_bits=1.90914 objective=1.51618 worse network rejected, reshuffling Epoch: 273 1.85499 cross_bits=1.90865 objective=1.51766 worse network accepted, reshuffling Epoch: 274 1.85518 cross_bits=1.90975 objective=1.51455 worse network accepted, reshuffling Epoch: 275 1.85358 cross_bits=1.91155 objective=1.51159 worse network accepted, reshuffling Epoch: 276 1.85444 cross_bits=1.91008 objective=1.5181 improvement accepted Epoch: 277 1.85418 cross_bits=1.91001 objective=1.51837 improvement accepted Epoch: 278 1.85401 cross_bits=1.90991 objective=1.51861 improvement accepted Epoch: 279 1.85383 cross_bits=1.9098 objective=1.51883 new best Epoch: 280 1.85365 cross_bits=1.90968 objective=1.51893 new best Epoch: 281 1.85347 cross_bits=1.90956 objective=1.51911 new best Epoch: 282 1.8533 cross_bits=1.90944 objective=1.51928 new best Epoch: 283 1.85312 cross_bits=1.90932 objective=1.51944 new best Epoch: 284 1.85295 cross_bits=1.9092 objective=1.51979 new best Epoch: 285 1.85278 cross_bits=1.90908 objective=1.52 new best Epoch: 286 1.85262 cross_bits=1.90896 objective=1.52018 new best Epoch: 287 1.85245 cross_bits=1.90884 objective=1.52037 new best Epoch: 288 1.85229 cross_bits=1.90873 objective=1.5206 new best, reshuffling Epoch: 289 1.8519 cross_bits=1.9063 objective=1.52089 new best Epoch: 290 1.85171 cross_bits=1.90618 objective=1.52091 new best Epoch: 291 1.85156 cross_bits=1.90607 objective=1.52107 new best Epoch: 292 1.8514 cross_bits=1.90597 objective=1.52112 new best Epoch: 293 1.85124 cross_bits=1.90587 objective=1.52142 new best Epoch: 294 1.85109 cross_bits=1.90577 objective=1.52153 new best Epoch: 295 1.85094 cross_bits=1.90567 objective=1.52165 new best Epoch: 296 1.85079 cross_bits=1.90557 objective=1.52171 new best Epoch: 297 1.85065 cross_bits=1.90547 objective=1.52192 new best Epoch: 298 1.8505 cross_bits=1.90538 objective=1.52212 new best Epoch: 299 1.85036 cross_bits=1.90528 objective=1.52232 new best Epoch: 300 1.85022 cross_bits=1.90519 objective=1.52249 new best Epoch: 301 1.85008 cross_bits=1.9051 objective=1.52257 new best Epoch: 302 1.84994 cross_bits=1.90501 objective=1.52261 new best Epoch: 303 1.8498 cross_bits=1.90492 objective=1.52277 new best Epoch: 304 1.84966 cross_bits=1.90483 objective=1.52297 new best Epoch: 305 1.84953 cross_bits=1.90474 objective=1.52298 new best Epoch: 306 1.8494 cross_bits=1.90466 objective=1.52313 new best Epoch: 307 1.84926 cross_bits=1.90457 objective=1.52334 new best Epoch: 308 1.84913 cross_bits=1.90449 objective=1.52347 new best Epoch: 309 1.84901 cross_bits=1.90441 objective=1.52355 new best Epoch: 310 1.84888 cross_bits=1.90433 objective=1.52373 new best Epoch: 311 1.84875 cross_bits=1.90424 objective=1.52384 new best Epoch: 312 1.84863 cross_bits=1.90416 objective=1.52396 new best Epoch: 313 1.8485 cross_bits=1.90409 objective=1.52411 new best Epoch: 314 1.84838 cross_bits=1.90401 objective=1.52427 new best Epoch: 315 1.84826 cross_bits=1.90393 objective=1.52448 new best Epoch: 316 1.84814 cross_bits=1.90386 objective=1.52462 new best Epoch: 317 1.84802 cross_bits=1.90378 objective=1.52474 new best Epoch: 318 1.8479 cross_bits=1.90371 objective=1.52477 new best Epoch: 319 1.84779 cross_bits=1.90363 objective=1.52489 new best Epoch: 320 1.84767 cross_bits=1.90356 objective=1.5251 new best # Network initialization done # command:# ReportNeuralNet networks/dunbrack-30pc-1763-t05-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-o_notor2-from-empty.net ok. # Network initialization done # Neural network printed. # command:CPU_time= 50925.5 sec, elapsed time= 51146.5 sec) # command:# ReportNetQualityForTestTo quality-reports/dunbrack-30pc-1763-t05-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-o_notor2-from-empty.test ok. # command:# Testing net dunbrack-30pc-1763-t05-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-o_notor2-from-empty.net # Network initialization done # command:# ReportTrainByChain given with no output file. # command:# ReportQvsPhatTo given with no output file. # command:# ReportUnitUsageTo given with no output file. # command:CPU_time= 51065.6 sec, elapsed time= 51287 sec) # command: