# command:# Prefix for input files set to # command:# Prefix for output files set to # command:# Seed set to 1185450734 # command:# Read 6 alphabets and 0 BackgroundProbs from /projects/compbio/lib/alphabet/hbonds.alphabet # command:Unrecognized 1th alphabet way-back-11 for BackgroundProbs that has no name Unrecognized 1th alphabet near-backbone-11 for BackgroundProbs that has no name Unrecognized 1th alphabet rel_sa10 for BackgroundProbs that has no name Unrecognized 1th alphabet CB_burial_12_7 for BackgroundProbs that has no name Unrecognized 1th alphabet CB_burial_14_7 for BackgroundProbs that has no name Unrecognized 1th alphabet abs_sa7 for BackgroundProbs that has no name Unrecognized 1th alphabet alpha11 for BackgroundProbs that has no name Unrecognized 1th alphabet Bystroff for BackgroundProbs that has no name Unrecognized 1th alphabet chi1_3 for BackgroundProbs that has no name Unrecognized 1th alphabet dry_burial_6.5_7 for BackgroundProbs that has no name Unrecognized 1th alphabet dry_burial_8_7 for BackgroundProbs that has no name Unrecognized 1th alphabet dry_burial_12_7 for BackgroundProbs that has no name Unrecognized 1th alphabet DSSP for BackgroundProbs that has no name Unrecognized 1th alphabet EBGHSTL for BackgroundProbs that has no name Unrecognized 1th alphabet str for BackgroundProbs that has no name Unrecognized 1th alphabet str2 for BackgroundProbs that has no name Unrecognized 1th alphabet dssp_ehl2 for BackgroundProbs that has no name Unrecognized 1th alphabet STRIDE for BackgroundProbs that has no name Unrecognized 1th alphabet EBGHTL for BackgroundProbs that has no name Unrecognized 1th alphabet stride_ehl2 for BackgroundProbs that has no name Unrecognized 1th alphabet tco for BackgroundProbs that has no name Unrecognized 1th alphabet wet_burial_6.5_7 for BackgroundProbs that has no name Unrecognized 1th alphabet pb for BackgroundProbs that has no name Unrecognized 1th alphabet gamma_2 for BackgroundProbs that has no name Unrecognized 1th alphabet CB8-sep9 for BackgroundProbs that has no name # Read 0 alphabets and 7 BackgroundProbs from /projects/compbio/lib/alphabet/dunbrack-in-scop.backgrounds # command:# Neural network set to IDGaaH13-3-13-5-13-7-13-9-n_notor-empty.net # command:# Neural network set to dunbrack-30pc-1763-t06-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-n_notor-from-empty.net # command:# Learning params read from /projects/compbio/experiments/protein-predict/predict-2nd/testing/params/7-jul-05.params # command:# Initializing Weights for n_notor # Initializing Bias for n_notor # Initializing Gain for n_notor # Initializing Weights for third_layer # Initializing Bias for third_layer # Initializing Gain for third_layer # Initializing Weights for second_layer # Initializing Bias for second_layer # Initializing Gain for second_layer # Initializing Weights for FirstLayer # Initializing Bias for FirstLayer # Initializing Gain for FirstLayer # Network initialization done # command:CPU_time= 0.008999 sec, elapsed time= 0.035019 sec) # command:# command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/predict-2nd/testing/training-data/ # command:# reading script from file dunbrack-30pc-1763-2.t06-thin90-n_notor # Prefix for input files set to # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1umkA/nostruct-align/1umkA.t06-thin90.a2m.gz # 1umkA.t06-thin90.a2m with 2592 sequences, total weight= 2592 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.984554 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1umkA/info/1umkA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1umkA/nostruct-align/1umkA.t06-thin90.a2m.gz, have 271 columns in 1 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gmuA/nostruct-align/1gmuA.t06-thin90.a2m.gz # 1gmuA.t06-thin90.a2m with 132 sequences, total weight= 60.8271 avg weight= 0.460811 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30055 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gmuA/info/1gmuA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gmuA/nostruct-align/1gmuA.t06-thin90.a2m.gz, have 409 columns in 2 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1aohA/nostruct-align/1aohA.t06-thin90.a2m.gz # 1aohA.t06-thin90.a2m with 50 sequences, total weight= 13.6394 avg weight= 0.272787 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1aohA/info/1aohA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1a/1aohA/nostruct-align/1aohA.t06-thin90.a2m.gz, have 552 columns in 3 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s0aA/nostruct-align/1s0aA.t06-thin90.a2m.gz # 1s0aA.t06-thin90.a2m with 5224 sequences, total weight= 5224 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00645 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s0aA/info/1s0aA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1s0aA/nostruct-align/1s0aA.t06-thin90.a2m.gz, have 980 columns in 4 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g6gA/nostruct-align/1g6gA.t06-thin90.a2m.gz # 1g6gA.t06-thin90.a2m with 1043 sequences, total weight= 1043 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.95841 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g6gA/info/1g6gA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1g6gA/nostruct-align/1g6gA.t06-thin90.a2m.gz, have 1107 columns in 5 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1din/nostruct-align/1din.t06-thin90.a2m.gz # 1din.t06-thin90.a2m with 11771 sequences, total weight= 11771 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.795087 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1din/info/1din.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1din/nostruct-align/1din.t06-thin90.a2m.gz, have 1340 columns in 6 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jkeA/nostruct-align/1jkeA.t06-thin90.a2m.gz # 1jkeA.t06-thin90.a2m with 276 sequences, total weight= 13.0866 avg weight= 0.0474154 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jkeA/info/1jkeA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jkeA/nostruct-align/1jkeA.t06-thin90.a2m.gz, have 1485 columns in 7 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tuvA/nostruct-align/1tuvA.t06-thin90.a2m.gz # 1tuvA.t06-thin90.a2m with 410 sequences, total weight= 410 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09248 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tuvA/info/1tuvA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1tuvA/nostruct-align/1tuvA.t06-thin90.a2m.gz, have 1588 columns in 8 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1ls9A/nostruct-align/1ls9A.t06-thin90.a2m.gz # 1ls9A.t06-thin90.a2m with 1917 sequences, total weight= 1917 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11002 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1ls9A/info/1ls9A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1ls9A/nostruct-align/1ls9A.t06-thin90.a2m.gz, have 1679 columns in 9 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gyvA/nostruct-align/1gyvA.t06-thin90.a2m.gz # 1gyvA.t06-thin90.a2m with 77 sequences, total weight= 40.9907 avg weight= 0.532347 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gyvA/info/1gyvA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gyvA/nostruct-align/1gyvA.t06-thin90.a2m.gz, have 1799 columns in 10 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1ccwA/nostruct-align/1ccwA.t06-thin90.a2m.gz # 1ccwA.t06-thin90.a2m with 512 sequences, total weight= 73.6072 avg weight= 0.143764 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30283 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1ccwA/info/1ccwA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1c/1ccwA/nostruct-align/1ccwA.t06-thin90.a2m.gz, have 1936 columns in 11 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iujA/nostruct-align/1iujA.t06-thin90.a2m.gz # 1iujA.t06-thin90.a2m with 648 sequences, total weight= 648 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.934175 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iujA/info/1iujA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1iujA/nostruct-align/1iujA.t06-thin90.a2m.gz, have 2038 columns in 12 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y8aA/nostruct-align/1y8aA.t06-thin90.a2m.gz # 1y8aA.t06-thin90.a2m with 59 sequences, total weight= 59 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.154 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y8aA/info/1y8aA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1y8aA/nostruct-align/1y8aA.t06-thin90.a2m.gz, have 2351 columns in 13 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1ako/nostruct-align/1ako.t06-thin90.a2m.gz # 1ako.t06-thin90.a2m with 2258 sequences, total weight= 2258 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.878296 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1ako/info/1ako.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1a/1ako/nostruct-align/1ako.t06-thin90.a2m.gz, have 2619 columns in 14 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nh0A/nostruct-align/1nh0A.t06-thin90.a2m.gz # 1nh0A.t06-thin90.a2m with 867 sequences, total weight= 2.79433 avg weight= 0.00322299 20 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nh0A/info/1nh0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nh0A/nostruct-align/1nh0A.t06-thin90.a2m.gz, have 2718 columns in 15 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dlwA/nostruct-align/1dlwA.t06-thin90.a2m.gz # 1dlwA.t06-thin90.a2m with 255 sequences, total weight= 255 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2519 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dlwA/info/1dlwA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1dlwA/nostruct-align/1dlwA.t06-thin90.a2m.gz, have 2834 columns in 16 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o7sA/nostruct-align/1o7sA.t06-thin90.a2m.gz # 1o7sA.t06-thin90.a2m with 11746 sequences, total weight= 42.7988 avg weight= 0.0036437 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30139 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o7sA/info/1o7sA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1o7sA/nostruct-align/1o7sA.t06-thin90.a2m.gz, have 2946 columns in 17 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ixh/nostruct-align/1ixh.t06-thin90.a2m.gz # 1ixh.t06-thin90.a2m with 662 sequences, total weight= 662 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17581 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ixh/info/1ixh.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1ixh/nostruct-align/1ixh.t06-thin90.a2m.gz, have 3267 columns in 18 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uuzA/nostruct-align/1uuzA.t06-thin90.a2m.gz # 1uuzA.t06-thin90.a2m with 20 sequences, total weight= 9.6707 avg weight= 0.483535 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uuzA/info/1uuzA.stride-mixed.n_notor WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1u/1uuzA/nostruct-align/1uuzA.t06-thin90.a2m.gz, have 3396 columns in 19 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kwfA/nostruct-align/1kwfA.t06-thin90.a2m.gz # 1kwfA.t06-thin90.a2m with 104 sequences, total weight= 104 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1322 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kwfA/info/1kwfA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kwfA/nostruct-align/1kwfA.t06-thin90.a2m.gz, have 3759 columns in 20 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pdo/nostruct-align/1pdo.t06-thin90.a2m.gz # 1pdo.t06-thin90.a2m with 272 sequences, total weight= 150.138 avg weight= 0.551977 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3047 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pdo/info/1pdo.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1pdo/nostruct-align/1pdo.t06-thin90.a2m.gz, have 3888 columns in 21 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j98A/nostruct-align/1j98A.t06-thin90.a2m.gz # 1j98A.t06-thin90.a2m with 90 sequences, total weight= 6.99335 avg weight= 0.0777039 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j98A/info/1j98A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1j98A/nostruct-align/1j98A.t06-thin90.a2m.gz, have 4042 columns in 22 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jidA/nostruct-align/1jidA.t06-thin90.a2m.gz # 1jidA.t06-thin90.a2m with 76 sequences, total weight= 40.1249 avg weight= 0.527959 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jidA/info/1jidA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jidA/nostruct-align/1jidA.t06-thin90.a2m.gz, have 4156 columns in 23 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l2hA/nostruct-align/1l2hA.t06-thin90.a2m.gz # 1l2hA.t06-thin90.a2m with 123 sequences, total weight= 47.2745 avg weight= 0.384346 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l2hA/info/1l2hA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1l2hA/nostruct-align/1l2hA.t06-thin90.a2m.gz, have 4300 columns in 24 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kv7A/nostruct-align/1kv7A.t06-thin90.a2m.gz # 1kv7A.t06-thin90.a2m with 1085 sequences, total weight= 1085 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09892 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kv7A/info/1kv7A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kv7A/nostruct-align/1kv7A.t06-thin90.a2m.gz, have 4763 columns in 25 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1ft5A/nostruct-align/1ft5A.t06-thin90.a2m.gz # 1ft5A.t06-thin90.a2m with 964 sequences, total weight= 964 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.887727 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1ft5A/info/1ft5A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1ft5A/nostruct-align/1ft5A.t06-thin90.a2m.gz, have 4974 columns in 26 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ytlA/nostruct-align/1ytlA.t06-thin90.a2m.gz # 1ytlA.t06-thin90.a2m with 18 sequences, total weight= 8.42037 avg weight= 0.467798 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ytlA/info/1ytlA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1ytlA/nostruct-align/1ytlA.t06-thin90.a2m.gz, have 5132 columns in 27 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ro7A/nostruct-align/1ro7A.t06-thin90.a2m.gz # 1ro7A.t06-thin90.a2m with 9 sequences, total weight= 4.04976 avg weight= 0.449974 14 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ro7A/info/1ro7A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1ro7A/nostruct-align/1ro7A.t06-thin90.a2m.gz, have 5390 columns in 28 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/4f/4fiv/nostruct-align/4fiv.t06-thin90.a2m.gz # 4fiv.t06-thin90.a2m with 613 sequences, total weight= 4.57372 avg weight= 0.00746121 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/4f/4fiv/info/4fiv.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/4f/4fiv/nostruct-align/4fiv.t06-thin90.a2m.gz, have 5503 columns in 29 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lj8A/nostruct-align/1lj8A.t06-thin90.a2m.gz # 1lj8A.t06-thin90.a2m with 262 sequences, total weight= 72.4218 avg weight= 0.276419 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30098 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lj8A/info/1lj8A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1lj8A/nostruct-align/1lj8A.t06-thin90.a2m.gz, have 5995 columns in 30 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1z2nX/nostruct-align/1z2nX.t06-thin90.a2m.gz # 1z2nX.t06-thin90.a2m with 4162 sequences, total weight= 4162 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.974372 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1z2nX/info/1z2nX.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1z/1z2nX/nostruct-align/1z2nX.t06-thin90.a2m.gz, have 6306 columns in 31 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qgvA/nostruct-align/1qgvA.t06-thin90.a2m.gz # 1qgvA.t06-thin90.a2m with 202 sequences, total weight= 58.0053 avg weight= 0.287155 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qgvA/info/1qgvA.stride-mixed.n_notor WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1q/1qgvA/nostruct-align/1qgvA.t06-thin90.a2m.gz, have 6436 columns in 32 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o6vA/nostruct-align/1o6vA.t06-thin90.a2m.gz # 1o6vA.t06-thin90.a2m with 7888 sequences, total weight= 7888 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.931405 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o6vA/info/1o6vA.stride-mixed.n_notor WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1o/1o6vA/nostruct-align/1o6vA.t06-thin90.a2m.gz, have 6898 columns in 33 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h6hA/nostruct-align/1h6hA.t06-thin90.a2m.gz # 1h6hA.t06-thin90.a2m with 414 sequences, total weight= 414 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0744 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h6hA/info/1h6hA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1h6hA/nostruct-align/1h6hA.t06-thin90.a2m.gz, have 7041 columns in 34 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ugxA/nostruct-align/1ugxA.t06-thin90.a2m.gz # 1ugxA.t06-thin90.a2m with 254 sequences, total weight= 67.5819 avg weight= 0.26607 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3011 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ugxA/info/1ugxA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1ugxA/nostruct-align/1ugxA.t06-thin90.a2m.gz, have 7174 columns in 35 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fx2A/nostruct-align/1fx2A.t06-thin90.a2m.gz # 1fx2A.t06-thin90.a2m with 1223 sequences, total weight= 1223 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08908 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fx2A/info/1fx2A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1fx2A/nostruct-align/1fx2A.t06-thin90.a2m.gz, have 7409 columns in 36 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gx3A/nostruct-align/1gx3A.t06-thin90.a2m.gz # 1gx3A.t06-thin90.a2m with 156 sequences, total weight= 156 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21546 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gx3A/info/1gx3A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gx3A/nostruct-align/1gx3A.t06-thin90.a2m.gz, have 7685 columns in 37 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jhjA/nostruct-align/1jhjA.t06-thin90.a2m.gz # 1jhjA.t06-thin90.a2m with 84 sequences, total weight= 39.1858 avg weight= 0.466498 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jhjA/info/1jhjA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jhjA/nostruct-align/1jhjA.t06-thin90.a2m.gz, have 7846 columns in 38 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kwgA/nostruct-align/1kwgA.t06-thin90.a2m.gz # 1kwgA.t06-thin90.a2m with 801 sequences, total weight= 801 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.985655 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kwgA/info/1kwgA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kwgA/nostruct-align/1kwgA.t06-thin90.a2m.gz, have 8490 columns in 39 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uf5A/nostruct-align/1uf5A.t06-thin90.a2m.gz # 1uf5A.t06-thin90.a2m with 1664 sequences, total weight= 1664 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08683 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uf5A/info/1uf5A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1uf5A/nostruct-align/1uf5A.t06-thin90.a2m.gz, have 8793 columns in 40 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1z0pA/nostruct-align/1z0pA.t06-thin90.a2m.gz # 1z0pA.t06-thin90.a2m with 8 sequences, total weight= 2.9708 avg weight= 0.37135 11 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1z0pA/info/1z0pA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1z/1z0pA/nostruct-align/1z0pA.t06-thin90.a2m.gz, have 8866 columns in 41 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p6oA/nostruct-align/1p6oA.t06-thin90.a2m.gz # 1p6oA.t06-thin90.a2m with 1327 sequences, total weight= 1327 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1993 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p6oA/info/1p6oA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1p6oA/nostruct-align/1p6oA.t06-thin90.a2m.gz, have 9022 columns in 42 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dowA/nostruct-align/1dowA.t06-thin90.a2m.gz # 1dowA.t06-thin90.a2m with 57 sequences, total weight= 17.1239 avg weight= 0.300419 31 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dowA/info/1dowA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1dowA/nostruct-align/1dowA.t06-thin90.a2m.gz, have 9227 columns in 43 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vprA/nostruct-align/1vprA.t06-thin90.a2m.gz # 1vprA.t06-thin90.a2m with 13 sequences, total weight= 2.39839 avg weight= 0.184492 11 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vprA/info/1vprA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vprA/nostruct-align/1vprA.t06-thin90.a2m.gz, have 9578 columns in 44 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vpdA/nostruct-align/1vpdA.t06-thin90.a2m.gz # 1vpdA.t06-thin90.a2m with 5717 sequences, total weight= 5717 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.867966 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vpdA/info/1vpdA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vpdA/nostruct-align/1vpdA.t06-thin90.a2m.gz, have 9872 columns in 45 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qf8A/nostruct-align/1qf8A.t06-thin90.a2m.gz # 1qf8A.t06-thin90.a2m with 79 sequences, total weight= 11.3791 avg weight= 0.144039 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qf8A/info/1qf8A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qf8A/nostruct-align/1qf8A.t06-thin90.a2m.gz, have 10039 columns in 46 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i4uA/nostruct-align/1i4uA.t06-thin90.a2m.gz # 1i4uA.t06-thin90.a2m with 651 sequences, total weight= 651 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.962209 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i4uA/info/1i4uA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1i4uA/nostruct-align/1i4uA.t06-thin90.a2m.gz, have 10220 columns in 47 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xjvA/nostruct-align/1xjvA.t06-thin90.a2m.gz # 1xjvA.t06-thin90.a2m with 57 sequences, total weight= 57 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07737 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xjvA/info/1xjvA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xjvA/nostruct-align/1xjvA.t06-thin90.a2m.gz, have 10511 columns in 48 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ytvA/nostruct-align/1ytvA.t06-thin90.a2m.gz # 1ytvA.t06-thin90.a2m with 2584 sequences, total weight= 2584 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.868274 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ytvA/info/1ytvA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1ytvA/nostruct-align/1ytvA.t06-thin90.a2m.gz, have 10877 columns in 49 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m0wA/nostruct-align/1m0wA.t06-thin90.a2m.gz # 1m0wA.t06-thin90.a2m with 183 sequences, total weight= 172.203 avg weight= 0.940999 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m0wA/info/1m0wA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1m0wA/nostruct-align/1m0wA.t06-thin90.a2m.gz, have 11358 columns in 50 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/4u/4uagA/nostruct-align/4uagA.t06-thin90.a2m.gz # 4uagA.t06-thin90.a2m with 2222 sequences, total weight= 2222 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12765 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/4u/4uagA/info/4uagA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/4u/4uagA/nostruct-align/4uagA.t06-thin90.a2m.gz, have 11787 columns in 51 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vpbA/nostruct-align/1vpbA.t06-thin90.a2m.gz # 1vpbA.t06-thin90.a2m with 548 sequences, total weight= 548 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23382 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vpbA/info/1vpbA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vpbA/nostruct-align/1vpbA.t06-thin90.a2m.gz, have 12224 columns in 52 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l9xA/nostruct-align/1l9xA.t06-thin90.a2m.gz # 1l9xA.t06-thin90.a2m with 3441 sequences, total weight= 3441 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05133 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l9xA/info/1l9xA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1l9xA/nostruct-align/1l9xA.t06-thin90.a2m.gz, have 12512 columns in 53 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rb9/nostruct-align/1rb9.t06-thin90.a2m.gz # 1rb9.t06-thin90.a2m with 278 sequences, total weight= 10.5546 avg weight= 0.0379663 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rb9/info/1rb9.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rb9/nostruct-align/1rb9.t06-thin90.a2m.gz, have 12564 columns in 54 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n71A/nostruct-align/1n71A.t06-thin90.a2m.gz # 1n71A.t06-thin90.a2m with 7098 sequences, total weight= 7098 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.774294 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n71A/info/1n71A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1n71A/nostruct-align/1n71A.t06-thin90.a2m.gz, have 12744 columns in 55 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t7rA/nostruct-align/1t7rA.t06-thin90.a2m.gz # 1t7rA.t06-thin90.a2m with 1017 sequences, total weight= 1017 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.997575 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t7rA/info/1t7rA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1t7rA/nostruct-align/1t7rA.t06-thin90.a2m.gz, have 12994 columns in 56 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pj5A/nostruct-align/1pj5A.t06-thin90.a2m.gz # 1pj5A.t06-thin90.a2m with 9734 sequences, total weight= 9734 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.975242 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pj5A/info/1pj5A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1pj5A/nostruct-align/1pj5A.t06-thin90.a2m.gz, have 13821 columns in 57 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vdkA/nostruct-align/1vdkA.t06-thin90.a2m.gz # 1vdkA.t06-thin90.a2m with 1317 sequences, total weight= 273.014 avg weight= 0.2073 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31952 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vdkA/info/1vdkA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vdkA/nostruct-align/1vdkA.t06-thin90.a2m.gz, have 14279 columns in 58 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2s/2sli/nostruct-align/2sli.t06-thin90.a2m.gz # 2sli.t06-thin90.a2m with 1263 sequences, total weight= 1263 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00676 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2s/2sli/info/2sli.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2s/2sli/nostruct-align/2sli.t06-thin90.a2m.gz, have 14958 columns in 59 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qs1A/nostruct-align/1qs1A.t06-thin90.a2m.gz # 1qs1A.t06-thin90.a2m with 170 sequences, total weight= 170 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.989362 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qs1A/info/1qs1A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qs1A/nostruct-align/1qs1A.t06-thin90.a2m.gz, have 15360 columns in 60 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h4gA/nostruct-align/1h4gA.t06-thin90.a2m.gz # 1h4gA.t06-thin90.a2m with 150 sequences, total weight= 13.6865 avg weight= 0.0912435 37 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h4gA/info/1h4gA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1h4gA/nostruct-align/1h4gA.t06-thin90.a2m.gz, have 15566 columns in 61 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v8cA/nostruct-align/1v8cA.t06-thin90.a2m.gz # 1v8cA.t06-thin90.a2m with 373 sequences, total weight= 121.123 avg weight= 0.324726 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30032 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v8cA/info/1v8cA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1v8cA/nostruct-align/1v8cA.t06-thin90.a2m.gz, have 15731 columns in 62 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mk4A/nostruct-align/1mk4A.t06-thin90.a2m.gz # 1mk4A.t06-thin90.a2m with 8268 sequences, total weight= 8268 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.801782 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mk4A/info/1mk4A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mk4A/nostruct-align/1mk4A.t06-thin90.a2m.gz, have 15888 columns in 63 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nh8A/nostruct-align/1nh8A.t06-thin90.a2m.gz # 1nh8A.t06-thin90.a2m with 296 sequences, total weight= 44.5596 avg weight= 0.150539 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nh8A/info/1nh8A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nh8A/nostruct-align/1nh8A.t06-thin90.a2m.gz, have 16164 columns in 64 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vkpA/nostruct-align/1vkpA.t06-thin90.a2m.gz # 1vkpA.t06-thin90.a2m with 171 sequences, total weight= 62.3447 avg weight= 0.364589 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vkpA/info/1vkpA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vkpA/nostruct-align/1vkpA.t06-thin90.a2m.gz, have 16529 columns in 65 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2s/2spcA/nostruct-align/2spcA.t06-thin90.a2m.gz # 2spcA.t06-thin90.a2m with 1242 sequences, total weight= 1242 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07741 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2s/2spcA/info/2spcA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2s/2spcA/nostruct-align/2spcA.t06-thin90.a2m.gz, have 16636 columns in 66 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yb3A/nostruct-align/1yb3A.t06-thin90.a2m.gz # 1yb3A.t06-thin90.a2m with 5 sequences, total weight= 4.04753 avg weight= 0.809506 13 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yb3A/info/1yb3A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1yb3A/nostruct-align/1yb3A.t06-thin90.a2m.gz, have 16802 columns in 67 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mgtA/nostruct-align/1mgtA.t06-thin90.a2m.gz # 1mgtA.t06-thin90.a2m with 670 sequences, total weight= 268.241 avg weight= 0.40036 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31071 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mgtA/info/1mgtA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mgtA/nostruct-align/1mgtA.t06-thin90.a2m.gz, have 16971 columns in 68 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rutX/nostruct-align/1rutX.t06-thin90.a2m.gz # 1rutX.t06-thin90.a2m with 1035 sequences, total weight= 1035 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14113 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rutX/info/1rutX.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rutX/nostruct-align/1rutX.t06-thin90.a2m.gz, have 17128 columns in 69 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1ht6A/nostruct-align/1ht6A.t06-thin90.a2m.gz # 1ht6A.t06-thin90.a2m with 2514 sequences, total weight= 2514 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01853 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1ht6A/info/1ht6A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1ht6A/nostruct-align/1ht6A.t06-thin90.a2m.gz, have 17532 columns in 70 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ok7A/nostruct-align/1ok7A.t06-thin90.a2m.gz # 1ok7A.t06-thin90.a2m with 416 sequences, total weight= 151.088 avg weight= 0.363193 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30686 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ok7A/info/1ok7A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1ok7A/nostruct-align/1ok7A.t06-thin90.a2m.gz, have 17898 columns in 71 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1czpA/nostruct-align/1czpA.t06-thin90.a2m.gz # 1czpA.t06-thin90.a2m with 1318 sequences, total weight= 1318 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26771 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1czpA/info/1czpA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1c/1czpA/nostruct-align/1czpA.t06-thin90.a2m.gz, have 17996 columns in 72 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ojhA/nostruct-align/1ojhA.t06-thin90.a2m.gz # 1ojhA.t06-thin90.a2m with 7 sequences, total weight= 4.22423 avg weight= 0.603462 14 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ojhA/info/1ojhA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1ojhA/nostruct-align/1ojhA.t06-thin90.a2m.gz, have 18048 columns in 73 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1me4A/nostruct-align/1me4A.t06-thin90.a2m.gz # 1me4A.t06-thin90.a2m with 1498 sequences, total weight= 422.472 avg weight= 0.282024 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32325 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1me4A/info/1me4A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1me4A/nostruct-align/1me4A.t06-thin90.a2m.gz, have 18263 columns in 74 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g6xA/nostruct-align/1g6xA.t06-thin90.a2m.gz # 1g6xA.t06-thin90.a2m with 659 sequences, total weight= 70.207 avg weight= 0.106536 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30541 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g6xA/info/1g6xA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1g6xA/nostruct-align/1g6xA.t06-thin90.a2m.gz, have 18321 columns in 75 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x99A/nostruct-align/1x99A.t06-thin90.a2m.gz # 1x99A.t06-thin90.a2m with 12 sequences, total weight= 5.84704 avg weight= 0.487254 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x99A/info/1x99A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1x99A/nostruct-align/1x99A.t06-thin90.a2m.gz, have 18466 columns in 76 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ogiA/nostruct-align/1ogiA.t06-thin90.a2m.gz # 1ogiA.t06-thin90.a2m with 2497 sequences, total weight= 2497 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.975834 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ogiA/info/1ogiA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1ogiA/nostruct-align/1ogiA.t06-thin90.a2m.gz, have 18761 columns in 77 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jiwI/nostruct-align/1jiwI.t06-thin90.a2m.gz # 1jiwI.t06-thin90.a2m with 26 sequences, total weight= 9.36476 avg weight= 0.360183 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jiwI/info/1jiwI.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jiwI/nostruct-align/1jiwI.t06-thin90.a2m.gz, have 18866 columns in 78 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pe1A/nostruct-align/1pe1A.t06-thin90.a2m.gz # 1pe1A.t06-thin90.a2m with 629 sequences, total weight= 31.4539 avg weight= 0.0500062 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pe1A/info/1pe1A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1pe1A/nostruct-align/1pe1A.t06-thin90.a2m.gz, have 19124 columns in 79 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mf7A/nostruct-align/1mf7A.t06-thin90.a2m.gz # 1mf7A.t06-thin90.a2m with 2221 sequences, total weight= 2221 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.962706 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mf7A/info/1mf7A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mf7A/nostruct-align/1mf7A.t06-thin90.a2m.gz, have 19318 columns in 80 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pyoB/nostruct-align/1pyoB.t06-thin90.a2m.gz # 1pyoB.t06-thin90.a2m with 154 sequences, total weight= 37.2441 avg weight= 0.241845 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pyoB/info/1pyoB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1pyoB/nostruct-align/1pyoB.t06-thin90.a2m.gz, have 19416 columns in 81 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tl9A/nostruct-align/1tl9A.t06-thin90.a2m.gz # 1tl9A.t06-thin90.a2m with 371 sequences, total weight= 371 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2299 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tl9A/info/1tl9A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1tl9A/nostruct-align/1tl9A.t06-thin90.a2m.gz, have 19737 columns in 82 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ob8A/nostruct-align/1ob8A.t06-thin90.a2m.gz # 1ob8A.t06-thin90.a2m with 210 sequences, total weight= 194.6 avg weight= 0.926665 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30042 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ob8A/info/1ob8A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1ob8A/nostruct-align/1ob8A.t06-thin90.a2m.gz, have 19856 columns in 83 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hxrA/nostruct-align/1hxrA.t06-thin90.a2m.gz # 1hxrA.t06-thin90.a2m with 27 sequences, total weight= 13.6966 avg weight= 0.507282 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hxrA/info/1hxrA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1hxrA/nostruct-align/1hxrA.t06-thin90.a2m.gz, have 19963 columns in 84 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g61A/nostruct-align/1g61A.t06-thin90.a2m.gz # 1g61A.t06-thin90.a2m with 72 sequences, total weight= 13.7336 avg weight= 0.190744 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g61A/info/1g61A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1g61A/nostruct-align/1g61A.t06-thin90.a2m.gz, have 20188 columns in 85 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1snrA/nostruct-align/1snrA.t06-thin90.a2m.gz # 1snrA.t06-thin90.a2m with 1147 sequences, total weight= 1147 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12334 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1snrA/info/1snrA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1snrA/nostruct-align/1snrA.t06-thin90.a2m.gz, have 20524 columns in 86 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vc4A/nostruct-align/1vc4A.t06-thin90.a2m.gz # 1vc4A.t06-thin90.a2m with 914 sequences, total weight= 914 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20503 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vc4A/info/1vc4A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vc4A/nostruct-align/1vc4A.t06-thin90.a2m.gz, have 20778 columns in 87 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oxdA/nostruct-align/1oxdA.t06-thin90.a2m.gz # 1oxdA.t06-thin90.a2m with 91 sequences, total weight= 18.5566 avg weight= 0.203919 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oxdA/info/1oxdA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1oxdA/nostruct-align/1oxdA.t06-thin90.a2m.gz, have 21004 columns in 88 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1co6A/nostruct-align/1co6A.t06-thin90.a2m.gz # 1co6A.t06-thin90.a2m with 379 sequences, total weight= 42.5508 avg weight= 0.112271 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3004 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1co6A/info/1co6A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1c/1co6A/nostruct-align/1co6A.t06-thin90.a2m.gz, have 21111 columns in 89 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1ftrA/nostruct-align/1ftrA.t06-thin90.a2m.gz # 1ftrA.t06-thin90.a2m with 108 sequences, total weight= 6.73466 avg weight= 0.062358 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1ftrA/info/1ftrA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1ftrA/nostruct-align/1ftrA.t06-thin90.a2m.gz, have 21407 columns in 90 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sjwA/nostruct-align/1sjwA.t06-thin90.a2m.gz # 1sjwA.t06-thin90.a2m with 904 sequences, total weight= 904 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.862998 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sjwA/info/1sjwA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1sjwA/nostruct-align/1sjwA.t06-thin90.a2m.gz, have 21549 columns in 91 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pbjA/nostruct-align/1pbjA.t06-thin90.a2m.gz # 1pbjA.t06-thin90.a2m with 3461 sequences, total weight= 3461 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1336 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pbjA/info/1pbjA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1pbjA/nostruct-align/1pbjA.t06-thin90.a2m.gz, have 21669 columns in 92 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g8mA/nostruct-align/1g8mA.t06-thin90.a2m.gz # 1g8mA.t06-thin90.a2m with 369 sequences, total weight= 14.7362 avg weight= 0.0399354 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g8mA/info/1g8mA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1g8mA/nostruct-align/1g8mA.t06-thin90.a2m.gz, have 22259 columns in 93 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vr5A/nostruct-align/1vr5A.t06-thin90.a2m.gz # 1vr5A.t06-thin90.a2m with 1954 sequences, total weight= 1954 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04243 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vr5A/info/1vr5A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vr5A/nostruct-align/1vr5A.t06-thin90.a2m.gz, have 22795 columns in 94 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vm9A/nostruct-align/1vm9A.t06-thin90.a2m.gz # 1vm9A.t06-thin90.a2m with 1610 sequences, total weight= 1610 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15862 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vm9A/info/1vm9A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vm9A/nostruct-align/1vm9A.t06-thin90.a2m.gz, have 22904 columns in 95 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uscA/nostruct-align/1uscA.t06-thin90.a2m.gz # 1uscA.t06-thin90.a2m with 756 sequences, total weight= 756 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17344 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uscA/info/1uscA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1uscA/nostruct-align/1uscA.t06-thin90.a2m.gz, have 23082 columns in 96 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jy1A/nostruct-align/1jy1A.t06-thin90.a2m.gz # 1jy1A.t06-thin90.a2m with 71 sequences, total weight= 71 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24466 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jy1A/info/1jy1A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jy1A/nostruct-align/1jy1A.t06-thin90.a2m.gz, have 23521 columns in 97 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tgsI/nostruct-align/1tgsI.t06-thin90.a2m.gz # 1tgsI.t06-thin90.a2m with 476 sequences, total weight= 98.6397 avg weight= 0.207226 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30936 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tgsI/info/1tgsI.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1tgsI/nostruct-align/1tgsI.t06-thin90.a2m.gz, have 23577 columns in 98 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i27A/nostruct-align/1i27A.t06-thin90.a2m.gz # 1i27A.t06-thin90.a2m with 12 sequences, total weight= 5.47489 avg weight= 0.456241 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i27A/info/1i27A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1i27A/nostruct-align/1i27A.t06-thin90.a2m.gz, have 23650 columns in 99 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kjwA/nostruct-align/1kjwA.t06-thin90.a2m.gz # 1kjwA.t06-thin90.a2m with 944 sequences, total weight= 944 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24178 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kjwA/info/1kjwA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kjwA/nostruct-align/1kjwA.t06-thin90.a2m.gz, have 23942 columns in 100 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fpoA/nostruct-align/1fpoA.t06-thin90.a2m.gz # 1fpoA.t06-thin90.a2m with 2642 sequences, total weight= 2642 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00328 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fpoA/info/1fpoA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1fpoA/nostruct-align/1fpoA.t06-thin90.a2m.gz, have 24113 columns in 101 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qsaA/nostruct-align/1qsaA.t06-thin90.a2m.gz # 1qsaA.t06-thin90.a2m with 946 sequences, total weight= 946 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.930035 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qsaA/info/1qsaA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qsaA/nostruct-align/1qsaA.t06-thin90.a2m.gz, have 24731 columns in 102 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gwmA/nostruct-align/1gwmA.t06-thin90.a2m.gz # 1gwmA.t06-thin90.a2m with 3 sequences, total weight= 2.75287 avg weight= 0.917623 9 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gwmA/info/1gwmA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gwmA/nostruct-align/1gwmA.t06-thin90.a2m.gz, have 24884 columns in 103 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vjvA/nostruct-align/1vjvA.t06-thin90.a2m.gz # 1vjvA.t06-thin90.a2m with 1218 sequences, total weight= 1218 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02586 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vjvA/info/1vjvA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vjvA/nostruct-align/1vjvA.t06-thin90.a2m.gz, have 25251 columns in 104 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nlqA/nostruct-align/1nlqA.t06-thin90.a2m.gz # 1nlqA.t06-thin90.a2m with 52 sequences, total weight= 11.0791 avg weight= 0.21306 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nlqA/info/1nlqA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nlqA/nostruct-align/1nlqA.t06-thin90.a2m.gz, have 25356 columns in 105 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b2pA/nostruct-align/1b2pA.t06-thin90.a2m.gz # 1b2pA.t06-thin90.a2m with 225 sequences, total weight= 106.025 avg weight= 0.471222 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30157 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b2pA/info/1b2pA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1b/1b2pA/nostruct-align/1b2pA.t06-thin90.a2m.gz, have 25475 columns in 106 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fvkA/nostruct-align/1fvkA.t06-thin90.a2m.gz # 1fvkA.t06-thin90.a2m with 1110 sequences, total weight= 1110 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.943618 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fvkA/info/1fvkA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1fvkA/nostruct-align/1fvkA.t06-thin90.a2m.gz, have 25663 columns in 107 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ymtA/nostruct-align/1ymtA.t06-thin90.a2m.gz # 1ymtA.t06-thin90.a2m with 1206 sequences, total weight= 1206 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.916166 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ymtA/info/1ymtA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1ymtA/nostruct-align/1ymtA.t06-thin90.a2m.gz, have 25898 columns in 108 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pmi/nostruct-align/1pmi.t06-thin90.a2m.gz # 1pmi.t06-thin90.a2m with 257 sequences, total weight= 245.332 avg weight= 0.9546 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3003 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pmi/info/1pmi.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1pmi/nostruct-align/1pmi.t06-thin90.a2m.gz, have 26338 columns in 109 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uaiA/nostruct-align/1uaiA.t06-thin90.a2m.gz # 1uaiA.t06-thin90.a2m with 66 sequences, total weight= 66 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28219 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uaiA/info/1uaiA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1uaiA/nostruct-align/1uaiA.t06-thin90.a2m.gz, have 26561 columns in 110 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o8xA/nostruct-align/1o8xA.t06-thin90.a2m.gz # 1o8xA.t06-thin90.a2m with 3746 sequences, total weight= 3746 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05426 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o8xA/info/1o8xA.stride-mixed.n_notor WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1o/1o8xA/nostruct-align/1o8xA.t06-thin90.a2m.gz, have 26704 columns in 111 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nulA/nostruct-align/1nulA.t06-thin90.a2m.gz # 1nulA.t06-thin90.a2m with 1007 sequences, total weight= 1007 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18752 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nulA/info/1nulA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nulA/nostruct-align/1nulA.t06-thin90.a2m.gz, have 26846 columns in 112 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wjxA/nostruct-align/1wjxA.t06-thin90.a2m.gz # 1wjxA.t06-thin90.a2m with 297 sequences, total weight= 7.14979 avg weight= 0.0240734 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wjxA/info/1wjxA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1wjxA/nostruct-align/1wjxA.t06-thin90.a2m.gz, have 26958 columns in 113 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tca/nostruct-align/1tca.t06-thin90.a2m.gz # 1tca.t06-thin90.a2m with 7197 sequences, total weight= 7197 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.750473 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tca/info/1tca.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1tca/nostruct-align/1tca.t06-thin90.a2m.gz, have 27275 columns in 114 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lugA/nostruct-align/1lugA.t06-thin90.a2m.gz # 1lugA.t06-thin90.a2m with 450 sequences, total weight= 141.229 avg weight= 0.313841 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30521 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lugA/info/1lugA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1lugA/nostruct-align/1lugA.t06-thin90.a2m.gz, have 27534 columns in 115 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wmhB/nostruct-align/1wmhB.t06-thin90.a2m.gz # 1wmhB.t06-thin90.a2m with 21 sequences, total weight= 5.20398 avg weight= 0.247809 19 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wmhB/info/1wmhB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1wmhB/nostruct-align/1wmhB.t06-thin90.a2m.gz, have 27616 columns in 116 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oaiA/nostruct-align/1oaiA.t06-thin90.a2m.gz # 1oaiA.t06-thin90.a2m with 23 sequences, total weight= 6.87745 avg weight= 0.29902 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oaiA/info/1oaiA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1oaiA/nostruct-align/1oaiA.t06-thin90.a2m.gz, have 27675 columns in 117 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jr8A/nostruct-align/1jr8A.t06-thin90.a2m.gz # 1jr8A.t06-thin90.a2m with 131 sequences, total weight= 115.87 avg weight= 0.884505 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30033 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jr8A/info/1jr8A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jr8A/nostruct-align/1jr8A.t06-thin90.a2m.gz, have 27780 columns in 118 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j1nA/nostruct-align/1j1nA.t06-thin90.a2m.gz # 1j1nA.t06-thin90.a2m with 2507 sequences, total weight= 2507 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.868096 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j1nA/info/1j1nA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1j1nA/nostruct-align/1j1nA.t06-thin90.a2m.gz, have 28272 columns in 119 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v58A/nostruct-align/1v58A.t06-thin90.a2m.gz # 1v58A.t06-thin90.a2m with 1232 sequences, total weight= 1232 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.930283 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v58A/info/1v58A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1v58A/nostruct-align/1v58A.t06-thin90.a2m.gz, have 28501 columns in 120 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w3oA/nostruct-align/1w3oA.t06-thin90.a2m.gz # 1w3oA.t06-thin90.a2m with 570 sequences, total weight= 570 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01861 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w3oA/info/1w3oA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1w3oA/nostruct-align/1w3oA.t06-thin90.a2m.gz, have 28705 columns in 121 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u4gA/nostruct-align/1u4gA.t06-thin90.a2m.gz # 1u4gA.t06-thin90.a2m with 230 sequences, total weight= 230 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23959 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u4gA/info/1u4gA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1u4gA/nostruct-align/1u4gA.t06-thin90.a2m.gz, have 29003 columns in 122 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kllA/nostruct-align/1kllA.t06-thin90.a2m.gz # 1kllA.t06-thin90.a2m with 3580 sequences, total weight= 3580 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.861207 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kllA/info/1kllA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kllA/nostruct-align/1kllA.t06-thin90.a2m.gz, have 29131 columns in 123 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eexA/nostruct-align/1eexA.t06-thin90.a2m.gz # 1eexA.t06-thin90.a2m with 18 sequences, total weight= 3.85802 avg weight= 0.214335 14 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eexA/info/1eexA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1eexA/nostruct-align/1eexA.t06-thin90.a2m.gz, have 29682 columns in 124 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1roaA/nostruct-align/1roaA.t06-thin90.a2m.gz # 1roaA.t06-thin90.a2m with 340 sequences, total weight= 340 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15215 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1roaA/info/1roaA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1roaA/nostruct-align/1roaA.t06-thin90.a2m.gz, have 29793 columns in 125 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1atg/nostruct-align/1atg.t06-thin90.a2m.gz # 1atg.t06-thin90.a2m with 3089 sequences, total weight= 3089 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.872487 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1atg/info/1atg.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1a/1atg/nostruct-align/1atg.t06-thin90.a2m.gz, have 30024 columns in 126 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f74A/nostruct-align/1f74A.t06-thin90.a2m.gz # 1f74A.t06-thin90.a2m with 901 sequences, total weight= 901 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29661 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f74A/info/1f74A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1f74A/nostruct-align/1f74A.t06-thin90.a2m.gz, have 30317 columns in 127 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v8hA/nostruct-align/1v8hA.t06-thin90.a2m.gz # 1v8hA.t06-thin90.a2m with 87 sequences, total weight= 29.3985 avg weight= 0.337914 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v8hA/info/1v8hA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1v8hA/nostruct-align/1v8hA.t06-thin90.a2m.gz, have 30423 columns in 128 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n62B/nostruct-align/1n62B.t06-thin90.a2m.gz # 1n62B.t06-thin90.a2m with 881 sequences, total weight= 739.084 avg weight= 0.838915 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30347 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n62B/info/1n62B.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1n62B/nostruct-align/1n62B.t06-thin90.a2m.gz, have 31227 columns in 129 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gpiA/nostruct-align/1gpiA.t06-thin90.a2m.gz # 1gpiA.t06-thin90.a2m with 93 sequences, total weight= 8.38356 avg weight= 0.0901458 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gpiA/info/1gpiA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gpiA/nostruct-align/1gpiA.t06-thin90.a2m.gz, have 31658 columns in 130 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uylA/nostruct-align/1uylA.t06-thin90.a2m.gz # 1uylA.t06-thin90.a2m with 487 sequences, total weight= 48.6116 avg weight= 0.0998185 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30052 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uylA/info/1uylA.stride-mixed.n_notor WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1u/1uylA/nostruct-align/1uylA.t06-thin90.a2m.gz, have 31865 columns in 131 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f2tA/nostruct-align/1f2tA.t06-thin90.a2m.gz # 1f2tA.t06-thin90.a2m with 13096 sequences, total weight= 13096 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.897159 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f2tA/info/1f2tA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1f2tA/nostruct-align/1f2tA.t06-thin90.a2m.gz, have 32010 columns in 132 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hxn/nostruct-align/1hxn.t06-thin90.a2m.gz # 1hxn.t06-thin90.a2m with 355 sequences, total weight= 348.613 avg weight= 0.982009 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hxn/info/1hxn.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1hxn/nostruct-align/1hxn.t06-thin90.a2m.gz, have 32220 columns in 133 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tn6A/nostruct-align/1tn6A.t06-thin90.a2m.gz # 1tn6A.t06-thin90.a2m with 325 sequences, total weight= 325 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.84431 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tn6A/info/1tn6A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1tn6A/nostruct-align/1tn6A.t06-thin90.a2m.gz, have 32535 columns in 134 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qo7A/nostruct-align/1qo7A.t06-thin90.a2m.gz # 1qo7A.t06-thin90.a2m with 9419 sequences, total weight= 9419 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.761347 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qo7A/info/1qo7A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qo7A/nostruct-align/1qo7A.t06-thin90.a2m.gz, have 32920 columns in 135 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y7rA/nostruct-align/1y7rA.t06-thin90.a2m.gz # 1y7rA.t06-thin90.a2m with 7765 sequences, total weight= 7765 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.839303 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y7rA/info/1y7rA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1y7rA/nostruct-align/1y7rA.t06-thin90.a2m.gz, have 33053 columns in 136 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lv7A/nostruct-align/1lv7A.t06-thin90.a2m.gz # 1lv7A.t06-thin90.a2m with 9834 sequences, total weight= 9834 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.96605 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lv7A/info/1lv7A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1lv7A/nostruct-align/1lv7A.t06-thin90.a2m.gz, have 33304 columns in 137 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2p/2por/nostruct-align/2por.t06-thin90.a2m.gz # 2por.t06-thin90.a2m with 865 sequences, total weight= 865 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11159 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2p/2por/info/2por.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2p/2por/nostruct-align/2por.t06-thin90.a2m.gz, have 33605 columns in 138 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s9uA/nostruct-align/1s9uA.t06-thin90.a2m.gz # 1s9uA.t06-thin90.a2m with 295 sequences, total weight= 295 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06265 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s9uA/info/1s9uA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1s9uA/nostruct-align/1s9uA.t06-thin90.a2m.gz, have 33806 columns in 139 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oa8A/nostruct-align/1oa8A.t06-thin90.a2m.gz # 1oa8A.t06-thin90.a2m with 31 sequences, total weight= 12.9389 avg weight= 0.417383 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oa8A/info/1oa8A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1oa8A/nostruct-align/1oa8A.t06-thin90.a2m.gz, have 33934 columns in 140 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j8bA/nostruct-align/1j8bA.t06-thin90.a2m.gz # 1j8bA.t06-thin90.a2m with 279 sequences, total weight= 29.8979 avg weight= 0.107161 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j8bA/info/1j8bA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1j8bA/nostruct-align/1j8bA.t06-thin90.a2m.gz, have 34026 columns in 141 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w23A/nostruct-align/1w23A.t06-thin90.a2m.gz # 1w23A.t06-thin90.a2m with 3377 sequences, total weight= 3377 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.848749 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w23A/info/1w23A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1w23A/nostruct-align/1w23A.t06-thin90.a2m.gz, have 34386 columns in 142 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n2eA/nostruct-align/1n2eA.t06-thin90.a2m.gz # 1n2eA.t06-thin90.a2m with 320 sequences, total weight= 21.0058 avg weight= 0.0656432 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n2eA/info/1n2eA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1n2eA/nostruct-align/1n2eA.t06-thin90.a2m.gz, have 34674 columns in 143 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eyeA/nostruct-align/1eyeA.t06-thin90.a2m.gz # 1eyeA.t06-thin90.a2m with 674 sequences, total weight= 94.0461 avg weight= 0.139534 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30456 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eyeA/info/1eyeA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1eyeA/nostruct-align/1eyeA.t06-thin90.a2m.gz, have 34930 columns in 144 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nscA/nostruct-align/1nscA.t06-thin90.a2m.gz # 1nscA.t06-thin90.a2m with 70 sequences, total weight= 5.73158 avg weight= 0.0818797 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nscA/info/1nscA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nscA/nostruct-align/1nscA.t06-thin90.a2m.gz, have 35320 columns in 145 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hx0A/nostruct-align/1hx0A.t06-thin90.a2m.gz # 1hx0A.t06-thin90.a2m with 2508 sequences, total weight= 2508 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.998256 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hx0A/info/1hx0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1hx0A/nostruct-align/1hx0A.t06-thin90.a2m.gz, have 35816 columns in 146 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qftA/nostruct-align/1qftA.t06-thin90.a2m.gz # 1qftA.t06-thin90.a2m with 74 sequences, total weight= 74 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03648 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qftA/info/1qftA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qftA/nostruct-align/1qftA.t06-thin90.a2m.gz, have 35991 columns in 147 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g8aA/nostruct-align/1g8aA.t06-thin90.a2m.gz # 1g8aA.t06-thin90.a2m with 12834 sequences, total weight= 12834 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.716196 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g8aA/info/1g8aA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1g8aA/nostruct-align/1g8aA.t06-thin90.a2m.gz, have 36218 columns in 148 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b9mA/nostruct-align/1b9mA.t06-thin90.a2m.gz # 1b9mA.t06-thin90.a2m with 721 sequences, total weight= 721 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0349 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b9mA/info/1b9mA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1b/1b9mA/nostruct-align/1b9mA.t06-thin90.a2m.gz, have 36476 columns in 149 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k2xB/nostruct-align/1k2xB.t06-thin90.a2m.gz # 1k2xB.t06-thin90.a2m with 202 sequences, total weight= 35.1365 avg weight= 0.173943 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30062 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k2xB/info/1k2xB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1k2xB/nostruct-align/1k2xB.t06-thin90.a2m.gz, have 36611 columns in 150 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yfqA/nostruct-align/1yfqA.t06-thin90.a2m.gz # 1yfqA.t06-thin90.a2m with 7808 sequences, total weight= 7808 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.690716 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yfqA/info/1yfqA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1yfqA/nostruct-align/1yfqA.t06-thin90.a2m.gz, have 36953 columns in 151 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xkpC/nostruct-align/1xkpC.t06-thin90.a2m.gz # 1xkpC.t06-thin90.a2m with 9 sequences, total weight= 5.32768 avg weight= 0.591965 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xkpC/info/1xkpC.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xkpC/nostruct-align/1xkpC.t06-thin90.a2m.gz, have 37079 columns in 152 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dtdB/nostruct-align/1dtdB.t06-thin90.a2m.gz # 1dtdB.t06-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.675221 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dtdB/info/1dtdB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1dtdB/nostruct-align/1dtdB.t06-thin90.a2m.gz, have 37140 columns in 153 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g8eA/nostruct-align/1g8eA.t06-thin90.a2m.gz # 1g8eA.t06-thin90.a2m with 37 sequences, total weight= 8.01036 avg weight= 0.216496 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g8eA/info/1g8eA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1g8eA/nostruct-align/1g8eA.t06-thin90.a2m.gz, have 37238 columns in 154 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q5zA/nostruct-align/1q5zA.t06-thin90.a2m.gz # 1q5zA.t06-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.588933 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q5zA/info/1q5zA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1q5zA/nostruct-align/1q5zA.t06-thin90.a2m.gz, have 37383 columns in 155 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s99A/nostruct-align/1s99A.t06-thin90.a2m.gz # 1s99A.t06-thin90.a2m with 14 sequences, total weight= 8.24076 avg weight= 0.588625 15 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s99A/info/1s99A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1s99A/nostruct-align/1s99A.t06-thin90.a2m.gz, have 37569 columns in 156 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w6uA/nostruct-align/1w6uA.t06-thin90.a2m.gz # 1w6uA.t06-thin90.a2m with 12726 sequences, total weight= 12726 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04284 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w6uA/info/1w6uA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1w6uA/nostruct-align/1w6uA.t06-thin90.a2m.gz, have 37857 columns in 157 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sluA/nostruct-align/1sluA.t06-thin90.a2m.gz # 1sluA.t06-thin90.a2m with 39 sequences, total weight= 12.3717 avg weight= 0.317224 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sluA/info/1sluA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1sluA/nostruct-align/1sluA.t06-thin90.a2m.gz, have 37988 columns in 158 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1itxA/nostruct-align/1itxA.t06-thin90.a2m.gz # 1itxA.t06-thin90.a2m with 1076 sequences, total weight= 1076 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09315 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1itxA/info/1itxA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1itxA/nostruct-align/1itxA.t06-thin90.a2m.gz, have 38407 columns in 159 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o97D/nostruct-align/1o97D.t06-thin90.a2m.gz # 1o97D.t06-thin90.a2m with 706 sequences, total weight= 74.8438 avg weight= 0.106011 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30189 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o97D/info/1o97D.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1o97D/nostruct-align/1o97D.t06-thin90.a2m.gz, have 38722 columns in 160 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/4e/4eugA/nostruct-align/4eugA.t06-thin90.a2m.gz # 4eugA.t06-thin90.a2m with 330 sequences, total weight= 21.1498 avg weight= 0.0640904 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/4e/4eugA/info/4eugA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/4e/4eugA/nostruct-align/4eugA.t06-thin90.a2m.gz, have 38947 columns in 161 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wrrA/nostruct-align/1wrrA.t06-thin90.a2m.gz # 1wrrA.t06-thin90.a2m with 71 sequences, total weight= 13.8389 avg weight= 0.194914 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wrrA/info/1wrrA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1wrrA/nostruct-align/1wrrA.t06-thin90.a2m.gz, have 39242 columns in 162 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vh5A/nostruct-align/1vh5A.t06-thin90.a2m.gz # 1vh5A.t06-thin90.a2m with 1386 sequences, total weight= 1386 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.963368 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vh5A/info/1vh5A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vh5A/nostruct-align/1vh5A.t06-thin90.a2m.gz, have 39380 columns in 163 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vljA/nostruct-align/1vljA.t06-thin90.a2m.gz # 1vljA.t06-thin90.a2m with 1357 sequences, total weight= 1357 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14797 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vljA/info/1vljA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vljA/nostruct-align/1vljA.t06-thin90.a2m.gz, have 39778 columns in 164 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rjdA/nostruct-align/1rjdA.t06-thin90.a2m.gz # 1rjdA.t06-thin90.a2m with 447 sequences, total weight= 447 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.992165 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rjdA/info/1rjdA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rjdA/nostruct-align/1rjdA.t06-thin90.a2m.gz, have 40106 columns in 165 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pwbA/nostruct-align/1pwbA.t06-thin90.a2m.gz # 1pwbA.t06-thin90.a2m with 2489 sequences, total weight= 2489 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.964491 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pwbA/info/1pwbA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1pwbA/nostruct-align/1pwbA.t06-thin90.a2m.gz, have 40257 columns in 166 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cv8/nostruct-align/1cv8.t06-thin90.a2m.gz # 1cv8.t06-thin90.a2m with 5 sequences, total weight= 2.72305 avg weight= 0.54461 10 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cv8/info/1cv8.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1c/1cv8/nostruct-align/1cv8.t06-thin90.a2m.gz, have 40430 columns in 167 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rylA/nostruct-align/1rylA.t06-thin90.a2m.gz # 1rylA.t06-thin90.a2m with 20 sequences, total weight= 20 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24363 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rylA/info/1rylA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rylA/nostruct-align/1rylA.t06-thin90.a2m.gz, have 40587 columns in 168 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1irdB/nostruct-align/1irdB.t06-thin90.a2m.gz # 1irdB.t06-thin90.a2m with 786 sequences, total weight= 129.827 avg weight= 0.165174 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31082 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1irdB/info/1irdB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1irdB/nostruct-align/1irdB.t06-thin90.a2m.gz, have 40733 columns in 169 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hbnB/nostruct-align/1hbnB.t06-thin90.a2m.gz # 1hbnB.t06-thin90.a2m with 23 sequences, total weight= 3.85587 avg weight= 0.167646 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hbnB/info/1hbnB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1hbnB/nostruct-align/1hbnB.t06-thin90.a2m.gz, have 41175 columns in 170 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j3wA/nostruct-align/1j3wA.t06-thin90.a2m.gz # 1j3wA.t06-thin90.a2m with 15 sequences, total weight= 7.02398 avg weight= 0.468265 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j3wA/info/1j3wA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1j3wA/nostruct-align/1j3wA.t06-thin90.a2m.gz, have 41309 columns in 171 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1twdA/nostruct-align/1twdA.t06-thin90.a2m.gz # 1twdA.t06-thin90.a2m with 128 sequences, total weight= 38.9349 avg weight= 0.304179 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1twdA/info/1twdA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1twdA/nostruct-align/1twdA.t06-thin90.a2m.gz, have 41543 columns in 172 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dmhA/nostruct-align/1dmhA.t06-thin90.a2m.gz # 1dmhA.t06-thin90.a2m with 412 sequences, total weight= 196.465 avg weight= 0.476856 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3028 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dmhA/info/1dmhA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1dmhA/nostruct-align/1dmhA.t06-thin90.a2m.gz, have 41852 columns in 173 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xffA/nostruct-align/1xffA.t06-thin90.a2m.gz # 1xffA.t06-thin90.a2m with 1653 sequences, total weight= 1653 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24573 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xffA/info/1xffA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xffA/nostruct-align/1xffA.t06-thin90.a2m.gz, have 42090 columns in 174 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1ka1A/nostruct-align/1ka1A.t06-thin90.a2m.gz # 1ka1A.t06-thin90.a2m with 1270 sequences, total weight= 1270 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11712 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1ka1A/info/1ka1A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1ka1A/nostruct-align/1ka1A.t06-thin90.a2m.gz, have 42444 columns in 175 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pq1A/nostruct-align/1pq1A.t06-thin90.a2m.gz # 1pq1A.t06-thin90.a2m with 160 sequences, total weight= 160 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11833 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pq1A/info/1pq1A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1pq1A/nostruct-align/1pq1A.t06-thin90.a2m.gz, have 42591 columns in 176 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ejdA/nostruct-align/1ejdA.t06-thin90.a2m.gz # 1ejdA.t06-thin90.a2m with 832 sequences, total weight= 93.4012 avg weight= 0.112261 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30529 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ejdA/info/1ejdA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1ejdA/nostruct-align/1ejdA.t06-thin90.a2m.gz, have 43010 columns in 177 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1el5A/nostruct-align/1el5A.t06-thin90.a2m.gz # 1el5A.t06-thin90.a2m with 10834 sequences, total weight= 10834 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.72324 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1el5A/info/1el5A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1el5A/nostruct-align/1el5A.t06-thin90.a2m.gz, have 43395 columns in 178 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ursA/nostruct-align/1ursA.t06-thin90.a2m.gz # 1ursA.t06-thin90.a2m with 2660 sequences, total weight= 2660 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.852421 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ursA/info/1ursA.stride-mixed.n_notor WARNING: skipping m, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1u/1ursA/nostruct-align/1ursA.t06-thin90.a2m.gz, have 43761 columns in 179 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1svsA/nostruct-align/1svsA.t06-thin90.a2m.gz # 1svsA.t06-thin90.a2m with 766 sequences, total weight= 116.372 avg weight= 0.151922 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30201 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1svsA/info/1svsA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1svsA/nostruct-align/1svsA.t06-thin90.a2m.gz, have 44077 columns in 180 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q35A/nostruct-align/1q35A.t06-thin90.a2m.gz # 1q35A.t06-thin90.a2m with 2927 sequences, total weight= 2927 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.823812 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q35A/info/1q35A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1q35A/nostruct-align/1q35A.t06-thin90.a2m.gz, have 44394 columns in 181 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gnuA/nostruct-align/1gnuA.t06-thin90.a2m.gz # 1gnuA.t06-thin90.a2m with 124 sequences, total weight= 26.9303 avg weight= 0.21718 42 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gnuA/info/1gnuA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gnuA/nostruct-align/1gnuA.t06-thin90.a2m.gz, have 44511 columns in 182 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vhh/nostruct-align/1vhh.t06-thin90.a2m.gz # 1vhh.t06-thin90.a2m with 59 sequences, total weight= 5.5186 avg weight= 0.0935357 19 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vhh/info/1vhh.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vhh/nostruct-align/1vhh.t06-thin90.a2m.gz, have 44668 columns in 183 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gcqC/nostruct-align/1gcqC.t06-thin90.a2m.gz # 1gcqC.t06-thin90.a2m with 738 sequences, total weight= 116.622 avg weight= 0.158024 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31138 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gcqC/info/1gcqC.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gcqC/nostruct-align/1gcqC.t06-thin90.a2m.gz, have 44737 columns in 184 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g2bA/nostruct-align/1g2bA.t06-thin90.a2m.gz # 1g2bA.t06-thin90.a2m with 21 sequences, total weight= 6.15389 avg weight= 0.293043 19 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g2bA/info/1g2bA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1g2bA/nostruct-align/1g2bA.t06-thin90.a2m.gz, have 44799 columns in 185 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oi7A/nostruct-align/1oi7A.t06-thin90.a2m.gz # 1oi7A.t06-thin90.a2m with 665 sequences, total weight= 176.998 avg weight= 0.266163 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30938 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oi7A/info/1oi7A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1oi7A/nostruct-align/1oi7A.t06-thin90.a2m.gz, have 45069 columns in 186 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v77A/nostruct-align/1v77A.t06-thin90.a2m.gz # 1v77A.t06-thin90.a2m with 146 sequences, total weight= 146 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08777 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v77A/info/1v77A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1v77A/nostruct-align/1v77A.t06-thin90.a2m.gz, have 45271 columns in 187 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l7lA/nostruct-align/1l7lA.t06-thin90.a2m.gz # 1l7lA.t06-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0258 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l7lA/info/1l7lA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1l7lA/nostruct-align/1l7lA.t06-thin90.a2m.gz, have 45392 columns in 188 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rvkA/nostruct-align/1rvkA.t06-thin90.a2m.gz # 1rvkA.t06-thin90.a2m with 1436 sequences, total weight= 1436 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18698 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rvkA/info/1rvkA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rvkA/nostruct-align/1rvkA.t06-thin90.a2m.gz, have 45773 columns in 189 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sdsA/nostruct-align/1sdsA.t06-thin90.a2m.gz # 1sdsA.t06-thin90.a2m with 500 sequences, total weight= 500 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29222 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sdsA/info/1sdsA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1sdsA/nostruct-align/1sdsA.t06-thin90.a2m.gz, have 45888 columns in 190 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xpmA/nostruct-align/1xpmA.t06-thin90.a2m.gz # 1xpmA.t06-thin90.a2m with 1562 sequences, total weight= 1562 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07909 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xpmA/info/1xpmA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xpmA/nostruct-align/1xpmA.t06-thin90.a2m.gz, have 46277 columns in 191 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ifc/nostruct-align/1ifc.t06-thin90.a2m.gz # 1ifc.t06-thin90.a2m with 308 sequences, total weight= 55.8851 avg weight= 0.181445 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ifc/info/1ifc.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1ifc/nostruct-align/1ifc.t06-thin90.a2m.gz, have 46408 columns in 192 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kolA/nostruct-align/1kolA.t06-thin90.a2m.gz # 1kolA.t06-thin90.a2m with 5061 sequences, total weight= 5061 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07426 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kolA/info/1kolA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kolA/nostruct-align/1kolA.t06-thin90.a2m.gz, have 46804 columns in 193 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lxjA/nostruct-align/1lxjA.t06-thin90.a2m.gz # 1lxjA.t06-thin90.a2m with 139 sequences, total weight= 44.4281 avg weight= 0.319626 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lxjA/info/1lxjA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1lxjA/nostruct-align/1lxjA.t06-thin90.a2m.gz, have 46908 columns in 194 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54C/nostruct-align/1v54C.t06-thin90.a2m.gz # 1v54C.t06-thin90.a2m with 1086 sequences, total weight= 84.6842 avg weight= 0.0779781 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30234 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54C/info/1v54C.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1v54C/nostruct-align/1v54C.t06-thin90.a2m.gz, have 47167 columns in 195 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dusA/nostruct-align/1dusA.t06-thin90.a2m.gz # 1dusA.t06-thin90.a2m with 14907 sequences, total weight= 14907 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.694212 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dusA/info/1dusA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1dusA/nostruct-align/1dusA.t06-thin90.a2m.gz, have 47361 columns in 196 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vl2A/nostruct-align/1vl2A.t06-thin90.a2m.gz # 1vl2A.t06-thin90.a2m with 2084 sequences, total weight= 2084 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25597 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vl2A/info/1vl2A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vl2A/nostruct-align/1vl2A.t06-thin90.a2m.gz, have 47759 columns in 197 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1viaA/nostruct-align/1viaA.t06-thin90.a2m.gz # 1viaA.t06-thin90.a2m with 7034 sequences, total weight= 7034 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.836735 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1viaA/info/1viaA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1viaA/nostruct-align/1viaA.t06-thin90.a2m.gz, have 47920 columns in 198 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pb7A/nostruct-align/1pb7A.t06-thin90.a2m.gz # 1pb7A.t06-thin90.a2m with 2655 sequences, total weight= 2655 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.934415 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pb7A/info/1pb7A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1pb7A/nostruct-align/1pb7A.t06-thin90.a2m.gz, have 48201 columns in 199 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lyvA/nostruct-align/1lyvA.t06-thin90.a2m.gz # 1lyvA.t06-thin90.a2m with 1055 sequences, total weight= 1055 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20753 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lyvA/info/1lyvA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1lyvA/nostruct-align/1lyvA.t06-thin90.a2m.gz, have 48484 columns in 200 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lb3A/nostruct-align/1lb3A.t06-thin90.a2m.gz # 1lb3A.t06-thin90.a2m with 668 sequences, total weight= 668 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2683 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lb3A/info/1lb3A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1lb3A/nostruct-align/1lb3A.t06-thin90.a2m.gz, have 48651 columns in 201 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c3pA/nostruct-align/1c3pA.t06-thin90.a2m.gz # 1c3pA.t06-thin90.a2m with 721 sequences, total weight= 511.079 avg weight= 0.708848 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3063 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c3pA/info/1c3pA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1c/1c3pA/nostruct-align/1c3pA.t06-thin90.a2m.gz, have 49023 columns in 202 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b8zA/nostruct-align/1b8zA.t06-thin90.a2m.gz # 1b8zA.t06-thin90.a2m with 516 sequences, total weight= 16.3314 avg weight= 0.03165 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b8zA/info/1b8zA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1b/1b8zA/nostruct-align/1b8zA.t06-thin90.a2m.gz, have 49090 columns in 203 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wb4A/nostruct-align/1wb4A.t06-thin90.a2m.gz # 1wb4A.t06-thin90.a2m with 4739 sequences, total weight= 4739 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.721877 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wb4A/info/1wb4A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1wb4A/nostruct-align/1wb4A.t06-thin90.a2m.gz, have 49373 columns in 204 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uteA/nostruct-align/1uteA.t06-thin90.a2m.gz # 1uteA.t06-thin90.a2m with 3460 sequences, total weight= 3460 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.670659 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uteA/info/1uteA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1uteA/nostruct-align/1uteA.t06-thin90.a2m.gz, have 49675 columns in 205 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1ks8A/nostruct-align/1ks8A.t06-thin90.a2m.gz # 1ks8A.t06-thin90.a2m with 305 sequences, total weight= 90.2397 avg weight= 0.295868 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30141 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1ks8A/info/1ks8A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1ks8A/nostruct-align/1ks8A.t06-thin90.a2m.gz, have 50108 columns in 206 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1ssxA/nostruct-align/1ssxA.t06-thin90.a2m.gz # 1ssxA.t06-thin90.a2m with 4222 sequences, total weight= 4222 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14347 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1ssxA/info/1ssxA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1ssxA/nostruct-align/1ssxA.t06-thin90.a2m.gz, have 50306 columns in 207 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ou8A/nostruct-align/1ou8A.t06-thin90.a2m.gz # 1ou8A.t06-thin90.a2m with 83 sequences, total weight= 8.15117 avg weight= 0.0982069 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ou8A/info/1ou8A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1ou8A/nostruct-align/1ou8A.t06-thin90.a2m.gz, have 50412 columns in 208 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bbkL/nostruct-align/2bbkL.t06-thin90.a2m.gz # 2bbkL.t06-thin90.a2m with 14 sequences, total weight= 3.29532 avg weight= 0.23538 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bbkL/info/2bbkL.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2b/2bbkL/nostruct-align/2bbkL.t06-thin90.a2m.gz, have 50537 columns in 209 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3c/3chbD/nostruct-align/3chbD.t06-thin90.a2m.gz # 3chbD.t06-thin90.a2m with 7 sequences, total weight= 2.54586 avg weight= 0.363694 9 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3c/3chbD/info/3chbD.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/3c/3chbD/nostruct-align/3chbD.t06-thin90.a2m.gz, have 50640 columns in 210 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mpgA/nostruct-align/1mpgA.t06-thin90.a2m.gz # 1mpgA.t06-thin90.a2m with 1092 sequences, total weight= 1092 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05389 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mpgA/info/1mpgA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mpgA/nostruct-align/1mpgA.t06-thin90.a2m.gz, have 50922 columns in 211 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1so7A/nostruct-align/1so7A.t06-thin90.a2m.gz # 1so7A.t06-thin90.a2m with 1325 sequences, total weight= 1325 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.949589 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1so7A/info/1so7A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1so7A/nostruct-align/1so7A.t06-thin90.a2m.gz, have 51283 columns in 212 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1os6A/nostruct-align/1os6A.t06-thin90.a2m.gz # 1os6A.t06-thin90.a2m with 143 sequences, total weight= 86.3027 avg weight= 0.603516 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30204 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1os6A/info/1os6A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1os6A/nostruct-align/1os6A.t06-thin90.a2m.gz, have 51354 columns in 213 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fjhA/nostruct-align/1fjhA.t06-thin90.a2m.gz # 1fjhA.t06-thin90.a2m with 11385 sequences, total weight= 11385 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14702 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fjhA/info/1fjhA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1fjhA/nostruct-align/1fjhA.t06-thin90.a2m.gz, have 51590 columns in 214 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1obfO/nostruct-align/1obfO.t06-thin90.a2m.gz # 1obfO.t06-thin90.a2m with 1656 sequences, total weight= 63.0543 avg weight= 0.0380763 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1obfO/info/1obfO.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1obfO/nostruct-align/1obfO.t06-thin90.a2m.gz, have 51925 columns in 215 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gvfA/nostruct-align/1gvfA.t06-thin90.a2m.gz # 1gvfA.t06-thin90.a2m with 392 sequences, total weight= 35.1314 avg weight= 0.089621 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gvfA/info/1gvfA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gvfA/nostruct-align/1gvfA.t06-thin90.a2m.gz, have 52198 columns in 216 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pvmA/nostruct-align/1pvmA.t06-thin90.a2m.gz # 1pvmA.t06-thin90.a2m with 3910 sequences, total weight= 3910 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.981361 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pvmA/info/1pvmA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1pvmA/nostruct-align/1pvmA.t06-thin90.a2m.gz, have 52376 columns in 217 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pu6A/nostruct-align/1pu6A.t06-thin90.a2m.gz # 1pu6A.t06-thin90.a2m with 1205 sequences, total weight= 1205 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10032 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pu6A/info/1pu6A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1pu6A/nostruct-align/1pu6A.t06-thin90.a2m.gz, have 52593 columns in 218 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vfjA/nostruct-align/1vfjA.t06-thin90.a2m.gz # 1vfjA.t06-thin90.a2m with 426 sequences, total weight= 22.9521 avg weight= 0.0538782 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vfjA/info/1vfjA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vfjA/nostruct-align/1vfjA.t06-thin90.a2m.gz, have 52709 columns in 219 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mixA/nostruct-align/1mixA.t06-thin90.a2m.gz # 1mixA.t06-thin90.a2m with 541 sequences, total weight= 541 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07031 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mixA/info/1mixA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mixA/nostruct-align/1mixA.t06-thin90.a2m.gz, have 52915 columns in 220 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eexB/nostruct-align/1eexB.t06-thin90.a2m.gz # 1eexB.t06-thin90.a2m with 31 sequences, total weight= 12.7458 avg weight= 0.411154 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eexB/info/1eexB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1eexB/nostruct-align/1eexB.t06-thin90.a2m.gz, have 53093 columns in 221 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i9zA/nostruct-align/1i9zA.t06-thin90.a2m.gz # 1i9zA.t06-thin90.a2m with 1416 sequences, total weight= 1416 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.92667 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i9zA/info/1i9zA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1i9zA/nostruct-align/1i9zA.t06-thin90.a2m.gz, have 53429 columns in 222 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h16A/nostruct-align/1h16A.t06-thin90.a2m.gz # 1h16A.t06-thin90.a2m with 176 sequences, total weight= 79.8617 avg weight= 0.45376 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h16A/info/1h16A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1h16A/nostruct-align/1h16A.t06-thin90.a2m.gz, have 54188 columns in 223 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fnlA/nostruct-align/1fnlA.t06-thin90.a2m.gz # 1fnlA.t06-thin90.a2m with 9709 sequences, total weight= 9709 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.92723 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fnlA/info/1fnlA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1fnlA/nostruct-align/1fnlA.t06-thin90.a2m.gz, have 54361 columns in 224 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1epxA/nostruct-align/1epxA.t06-thin90.a2m.gz # 1epxA.t06-thin90.a2m with 325 sequences, total weight= 18.7824 avg weight= 0.057792 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1epxA/info/1epxA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1epxA/nostruct-align/1epxA.t06-thin90.a2m.gz, have 54718 columns in 225 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i2tA/nostruct-align/1i2tA.t06-thin90.a2m.gz # 1i2tA.t06-thin90.a2m with 99 sequences, total weight= 10.3138 avg weight= 0.10418 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i2tA/info/1i2tA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1i2tA/nostruct-align/1i2tA.t06-thin90.a2m.gz, have 54779 columns in 226 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nnlA/nostruct-align/1nnlA.t06-thin90.a2m.gz # 1nnlA.t06-thin90.a2m with 6706 sequences, total weight= 6706 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.914857 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nnlA/info/1nnlA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nnlA/nostruct-align/1nnlA.t06-thin90.a2m.gz, have 54984 columns in 227 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54G/nostruct-align/1v54G.t06-thin90.a2m.gz # 1v54G.t06-thin90.a2m with 53 sequences, total weight= 13.0703 avg weight= 0.24661 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54G/info/1v54G.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1v54G/nostruct-align/1v54G.t06-thin90.a2m.gz, have 55068 columns in 228 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fk5A/nostruct-align/1fk5A.t06-thin90.a2m.gz # 1fk5A.t06-thin90.a2m with 219 sequences, total weight= 43.1991 avg weight= 0.197256 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30039 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fk5A/info/1fk5A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1fk5A/nostruct-align/1fk5A.t06-thin90.a2m.gz, have 55161 columns in 229 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1al3/nostruct-align/1al3.t06-thin90.a2m.gz # 1al3.t06-thin90.a2m with 7575 sequences, total weight= 7575 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24471 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1al3/info/1al3.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1a/1al3/nostruct-align/1al3.t06-thin90.a2m.gz, have 55398 columns in 230 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tx4A/nostruct-align/1tx4A.t06-thin90.a2m.gz # 1tx4A.t06-thin90.a2m with 1000 sequences, total weight= 1000 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18387 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tx4A/info/1tx4A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1tx4A/nostruct-align/1tx4A.t06-thin90.a2m.gz, have 55594 columns in 231 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w2wA/nostruct-align/1w2wA.t06-thin90.a2m.gz # 1w2wA.t06-thin90.a2m with 201 sequences, total weight= 32.5672 avg weight= 0.162026 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w2wA/info/1w2wA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1w2wA/nostruct-align/1w2wA.t06-thin90.a2m.gz, have 55805 columns in 232 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r0mA/nostruct-align/1r0mA.t06-thin90.a2m.gz # 1r0mA.t06-thin90.a2m with 1454 sequences, total weight= 1454 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17984 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r0mA/info/1r0mA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1r0mA/nostruct-align/1r0mA.t06-thin90.a2m.gz, have 56165 columns in 233 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nthA/nostruct-align/1nthA.t06-thin90.a2m.gz # 1nthA.t06-thin90.a2m with 4 sequences, total weight= 2.87974 avg weight= 0.719934 9 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nthA/info/1nthA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nthA/nostruct-align/1nthA.t06-thin90.a2m.gz, have 56622 columns in 234 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c4qA/nostruct-align/1c4qA.t06-thin90.a2m.gz # 1c4qA.t06-thin90.a2m with 12 sequences, total weight= 2.92882 avg weight= 0.244068 10 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c4qA/info/1c4qA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1c/1c4qA/nostruct-align/1c4qA.t06-thin90.a2m.gz, have 56691 columns in 235 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jzgA/nostruct-align/1jzgA.t06-thin90.a2m.gz # 1jzgA.t06-thin90.a2m with 138 sequences, total weight= 40.8843 avg weight= 0.296263 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jzgA/info/1jzgA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jzgA/nostruct-align/1jzgA.t06-thin90.a2m.gz, have 56819 columns in 236 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n62A/nostruct-align/1n62A.t06-thin90.a2m.gz # 1n62A.t06-thin90.a2m with 985 sequences, total weight= 164.998 avg weight= 0.16751 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31762 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n62A/info/1n62A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1n62A/nostruct-align/1n62A.t06-thin90.a2m.gz, have 56980 columns in 237 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h0hB/nostruct-align/1h0hB.t06-thin90.a2m.gz # 1h0hB.t06-thin90.a2m with 1239 sequences, total weight= 1239 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07739 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h0hB/info/1h0hB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1h0hB/nostruct-align/1h0hB.t06-thin90.a2m.gz, have 57194 columns in 238 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mg4A/nostruct-align/1mg4A.t06-thin90.a2m.gz # 1mg4A.t06-thin90.a2m with 120 sequences, total weight= 50.507 avg weight= 0.420892 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mg4A/info/1mg4A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mg4A/nostruct-align/1mg4A.t06-thin90.a2m.gz, have 57295 columns in 239 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1omrA/nostruct-align/1omrA.t06-thin90.a2m.gz # 1omrA.t06-thin90.a2m with 2971 sequences, total weight= 2971 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.883645 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1omrA/info/1omrA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1omrA/nostruct-align/1omrA.t06-thin90.a2m.gz, have 57496 columns in 240 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f60A/nostruct-align/1f60A.t06-thin90.a2m.gz # 1f60A.t06-thin90.a2m with 2491 sequences, total weight= 316.09 avg weight= 0.126893 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32785 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f60A/info/1f60A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1f60A/nostruct-align/1f60A.t06-thin90.a2m.gz, have 57936 columns in 241 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gvp/nostruct-align/1gvp.t06-thin90.a2m.gz # 1gvp.t06-thin90.a2m with 15 sequences, total weight= 6.979 avg weight= 0.465267 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gvp/info/1gvp.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gvp/nostruct-align/1gvp.t06-thin90.a2m.gz, have 58023 columns in 242 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1knmA/nostruct-align/1knmA.t06-thin90.a2m.gz # 1knmA.t06-thin90.a2m with 444 sequences, total weight= 444 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0834 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1knmA/info/1knmA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1knmA/nostruct-align/1knmA.t06-thin90.a2m.gz, have 58152 columns in 243 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y6xA/nostruct-align/1y6xA.t06-thin90.a2m.gz # 1y6xA.t06-thin90.a2m with 290 sequences, total weight= 15.2098 avg weight= 0.0524477 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y6xA/info/1y6xA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1y6xA/nostruct-align/1y6xA.t06-thin90.a2m.gz, have 58239 columns in 244 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b9wA/nostruct-align/1b9wA.t06-thin90.a2m.gz # 1b9wA.t06-thin90.a2m with 28 sequences, total weight= 5.74027 avg weight= 0.20501 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b9wA/info/1b9wA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1b/1b9wA/nostruct-align/1b9wA.t06-thin90.a2m.gz, have 58328 columns in 245 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o9gA/nostruct-align/1o9gA.t06-thin90.a2m.gz # 1o9gA.t06-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.859184 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o9gA/info/1o9gA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1o9gA/nostruct-align/1o9gA.t06-thin90.a2m.gz, have 58577 columns in 246 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fjjA/nostruct-align/1fjjA.t06-thin90.a2m.gz # 1fjjA.t06-thin90.a2m with 421 sequences, total weight= 421 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27841 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fjjA/info/1fjjA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1fjjA/nostruct-align/1fjjA.t06-thin90.a2m.gz, have 58736 columns in 247 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1ccwB/nostruct-align/1ccwB.t06-thin90.a2m.gz # 1ccwB.t06-thin90.a2m with 302 sequences, total weight= 73.8537 avg weight= 0.244549 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30042 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1ccwB/info/1ccwB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1c/1ccwB/nostruct-align/1ccwB.t06-thin90.a2m.gz, have 59219 columns in 248 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1josA/nostruct-align/1josA.t06-thin90.a2m.gz # 1josA.t06-thin90.a2m with 312 sequences, total weight= 42.969 avg weight= 0.137721 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30066 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1josA/info/1josA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1josA/nostruct-align/1josA.t06-thin90.a2m.gz, have 59319 columns in 249 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1obdA/nostruct-align/1obdA.t06-thin90.a2m.gz # 1obdA.t06-thin90.a2m with 375 sequences, total weight= 50.7357 avg weight= 0.135295 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1obdA/info/1obdA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1obdA/nostruct-align/1obdA.t06-thin90.a2m.gz, have 59617 columns in 250 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xmtA/nostruct-align/1xmtA.t06-thin90.a2m.gz # 1xmtA.t06-thin90.a2m with 170 sequences, total weight= 75.564 avg weight= 0.444494 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30102 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xmtA/info/1xmtA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xmtA/nostruct-align/1xmtA.t06-thin90.a2m.gz, have 59712 columns in 251 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rx0A/nostruct-align/1rx0A.t06-thin90.a2m.gz # 1rx0A.t06-thin90.a2m with 3457 sequences, total weight= 3457 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15487 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rx0A/info/1rx0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rx0A/nostruct-align/1rx0A.t06-thin90.a2m.gz, have 60096 columns in 252 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p99A/nostruct-align/1p99A.t06-thin90.a2m.gz # 1p99A.t06-thin90.a2m with 969 sequences, total weight= 969 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05269 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p99A/info/1p99A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1p99A/nostruct-align/1p99A.t06-thin90.a2m.gz, have 60351 columns in 253 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2l/2lisA/nostruct-align/2lisA.t06-thin90.a2m.gz # 2lisA.t06-thin90.a2m with 29 sequences, total weight= 10.7616 avg weight= 0.37109 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2l/2lisA/info/2lisA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2l/2lisA/nostruct-align/2lisA.t06-thin90.a2m.gz, have 60482 columns in 254 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vfyA/nostruct-align/1vfyA.t06-thin90.a2m.gz # 1vfyA.t06-thin90.a2m with 453 sequences, total weight= 61.5461 avg weight= 0.135863 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3063 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vfyA/info/1vfyA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vfyA/nostruct-align/1vfyA.t06-thin90.a2m.gz, have 60549 columns in 255 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h72C/nostruct-align/1h72C.t06-thin90.a2m.gz # 1h72C.t06-thin90.a2m with 1296 sequences, total weight= 1296 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01378 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h72C/info/1h72C.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1h72C/nostruct-align/1h72C.t06-thin90.a2m.gz, have 60845 columns in 256 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1olrA/nostruct-align/1olrA.t06-thin90.a2m.gz # 1olrA.t06-thin90.a2m with 90 sequences, total weight= 36.4431 avg weight= 0.404923 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1olrA/info/1olrA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1olrA/nostruct-align/1olrA.t06-thin90.a2m.gz, have 61069 columns in 257 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nycA/nostruct-align/1nycA.t06-thin90.a2m.gz # 1nycA.t06-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04307 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nycA/info/1nycA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nycA/nostruct-align/1nycA.t06-thin90.a2m.gz, have 61180 columns in 258 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gs5A/nostruct-align/1gs5A.t06-thin90.a2m.gz # 1gs5A.t06-thin90.a2m with 1716 sequences, total weight= 1716 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19795 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gs5A/info/1gs5A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gs5A/nostruct-align/1gs5A.t06-thin90.a2m.gz, have 61438 columns in 259 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h5uA/nostruct-align/1h5uA.t06-thin90.a2m.gz # 1h5uA.t06-thin90.a2m with 405 sequences, total weight= 46.8469 avg weight= 0.115671 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h5uA/info/1h5uA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1h5uA/nostruct-align/1h5uA.t06-thin90.a2m.gz, have 62249 columns in 260 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lfwA/nostruct-align/1lfwA.t06-thin90.a2m.gz # 1lfwA.t06-thin90.a2m with 2806 sequences, total weight= 2806 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.981751 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lfwA/info/1lfwA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1lfwA/nostruct-align/1lfwA.t06-thin90.a2m.gz, have 62717 columns in 261 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t06-thin90.a2m.gz # 7odcA.t06-thin90.a2m with 1254 sequences, total weight= 1254 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13296 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/7o/7odcA/info/7odcA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t06-thin90.a2m.gz, have 63104 columns in 262 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rm6A/nostruct-align/1rm6A.t06-thin90.a2m.gz # 1rm6A.t06-thin90.a2m with 888 sequences, total weight= 416.768 avg weight= 0.469334 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31141 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rm6A/info/1rm6A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rm6A/nostruct-align/1rm6A.t06-thin90.a2m.gz, have 63865 columns in 263 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pa7A/nostruct-align/1pa7A.t06-thin90.a2m.gz # 1pa7A.t06-thin90.a2m with 92 sequences, total weight= 21.1465 avg weight= 0.229854 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pa7A/info/1pa7A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1pa7A/nostruct-align/1pa7A.t06-thin90.a2m.gz, have 63995 columns in 264 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d8wA/nostruct-align/1d8wA.t06-thin90.a2m.gz # 1d8wA.t06-thin90.a2m with 570 sequences, total weight= 570 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14443 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d8wA/info/1d8wA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1d8wA/nostruct-align/1d8wA.t06-thin90.a2m.gz, have 64397 columns in 265 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bteA/nostruct-align/1bteA.t06-thin90.a2m.gz # 1bteA.t06-thin90.a2m with 46 sequences, total weight= 39.0794 avg weight= 0.849553 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bteA/info/1bteA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1b/1bteA/nostruct-align/1bteA.t06-thin90.a2m.gz, have 64489 columns in 266 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kt6A/nostruct-align/1kt6A.t06-thin90.a2m.gz # 1kt6A.t06-thin90.a2m with 549 sequences, total weight= 549 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.984384 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kt6A/info/1kt6A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kt6A/nostruct-align/1kt6A.t06-thin90.a2m.gz, have 64664 columns in 267 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mof/nostruct-align/1mof.t06-thin90.a2m.gz # 1mof.t06-thin90.a2m with 108 sequences, total weight= 12.184 avg weight= 0.112815 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mof/info/1mof.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mof/nostruct-align/1mof.t06-thin90.a2m.gz, have 64717 columns in 268 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vjoA/nostruct-align/1vjoA.t06-thin90.a2m.gz # 1vjoA.t06-thin90.a2m with 12005 sequences, total weight= 12005 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.841389 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vjoA/info/1vjoA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vjoA/nostruct-align/1vjoA.t06-thin90.a2m.gz, have 65094 columns in 269 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mqvA/nostruct-align/1mqvA.t06-thin90.a2m.gz # 1mqvA.t06-thin90.a2m with 116 sequences, total weight= 85.4579 avg weight= 0.736706 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30049 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mqvA/info/1mqvA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mqvA/nostruct-align/1mqvA.t06-thin90.a2m.gz, have 65217 columns in 270 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t0bA/nostruct-align/1t0bA.t06-thin90.a2m.gz # 1t0bA.t06-thin90.a2m with 155 sequences, total weight= 155 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04716 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t0bA/info/1t0bA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1t0bA/nostruct-align/1t0bA.t06-thin90.a2m.gz, have 65457 columns in 271 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r45A/nostruct-align/1r45A.t06-thin90.a2m.gz # 1r45A.t06-thin90.a2m with 51 sequences, total weight= 51 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13145 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r45A/info/1r45A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1r45A/nostruct-align/1r45A.t06-thin90.a2m.gz, have 65658 columns in 272 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3h/3htsB/nostruct-align/3htsB.t06-thin90.a2m.gz # 3htsB.t06-thin90.a2m with 189 sequences, total weight= 23.4535 avg weight= 0.124092 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3h/3htsB/info/3htsB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/3h/3htsB/nostruct-align/3htsB.t06-thin90.a2m.gz, have 65740 columns in 273 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c75A/nostruct-align/1c75A.t06-thin90.a2m.gz # 1c75A.t06-thin90.a2m with 1084 sequences, total weight= 531.758 avg weight= 0.490551 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31751 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c75A/info/1c75A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1c/1c75A/nostruct-align/1c75A.t06-thin90.a2m.gz, have 65811 columns in 274 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yleA/nostruct-align/1yleA.t06-thin90.a2m.gz # 1yleA.t06-thin90.a2m with 86 sequences, total weight= 12.1746 avg weight= 0.141565 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yleA/info/1yleA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1yleA/nostruct-align/1yleA.t06-thin90.a2m.gz, have 66141 columns in 275 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vknA/nostruct-align/1vknA.t06-thin90.a2m.gz # 1vknA.t06-thin90.a2m with 1593 sequences, total weight= 1593 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1557 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vknA/info/1vknA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vknA/nostruct-align/1vknA.t06-thin90.a2m.gz, have 66481 columns in 276 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dg6A/nostruct-align/1dg6A.t06-thin90.a2m.gz # 1dg6A.t06-thin90.a2m with 175 sequences, total weight= 62.5419 avg weight= 0.357383 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dg6A/info/1dg6A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1dg6A/nostruct-align/1dg6A.t06-thin90.a2m.gz, have 66630 columns in 277 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a62/nostruct-align/1a62.t06-thin90.a2m.gz # 1a62.t06-thin90.a2m with 198 sequences, total weight= 12.4139 avg weight= 0.0626967 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a62/info/1a62.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1a/1a62/nostruct-align/1a62.t06-thin90.a2m.gz, have 66755 columns in 278 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m55A/nostruct-align/1m55A.t06-thin90.a2m.gz # 1m55A.t06-thin90.a2m with 12 sequences, total weight= 12 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21956 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m55A/info/1m55A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1m55A/nostruct-align/1m55A.t06-thin90.a2m.gz, have 66948 columns in 279 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bgc/nostruct-align/1bgc.t06-thin90.a2m.gz # 1bgc.t06-thin90.a2m with 60 sequences, total weight= 29.1052 avg weight= 0.485087 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bgc/info/1bgc.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1b/1bgc/nostruct-align/1bgc.t06-thin90.a2m.gz, have 67106 columns in 280 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tu7A/nostruct-align/1tu7A.t06-thin90.a2m.gz # 1tu7A.t06-thin90.a2m with 3462 sequences, total weight= 3462 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.998612 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tu7A/info/1tu7A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1tu7A/nostruct-align/1tu7A.t06-thin90.a2m.gz, have 67314 columns in 281 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qxyA/nostruct-align/1qxyA.t06-thin90.a2m.gz # 1qxyA.t06-thin90.a2m with 1719 sequences, total weight= 1719 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19398 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qxyA/info/1qxyA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qxyA/nostruct-align/1qxyA.t06-thin90.a2m.gz, have 67563 columns in 282 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1shuX/nostruct-align/1shuX.t06-thin90.a2m.gz # 1shuX.t06-thin90.a2m with 2687 sequences, total weight= 2687 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.920845 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1shuX/info/1shuX.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1shuX/nostruct-align/1shuX.t06-thin90.a2m.gz, have 67744 columns in 283 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f9zA/nostruct-align/1f9zA.t06-thin90.a2m.gz # 1f9zA.t06-thin90.a2m with 3565 sequences, total weight= 3565 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.903514 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f9zA/info/1f9zA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1f9zA/nostruct-align/1f9zA.t06-thin90.a2m.gz, have 67872 columns in 284 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h8uA/nostruct-align/1h8uA.t06-thin90.a2m.gz # 1h8uA.t06-thin90.a2m with 2050 sequences, total weight= 2050 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07124 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h8uA/info/1h8uA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1h8uA/nostruct-align/1h8uA.t06-thin90.a2m.gz, have 67987 columns in 285 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uoyA/nostruct-align/1uoyA.t06-thin90.a2m.gz # 1uoyA.t06-thin90.a2m with 3 sequences, total weight= 2.26554 avg weight= 0.75518 8 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uoyA/info/1uoyA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1uoyA/nostruct-align/1uoyA.t06-thin90.a2m.gz, have 68051 columns in 286 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j54A/nostruct-align/1j54A.t06-thin90.a2m.gz # 1j54A.t06-thin90.a2m with 1494 sequences, total weight= 1494 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06896 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j54A/info/1j54A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1j54A/nostruct-align/1j54A.t06-thin90.a2m.gz, have 68225 columns in 287 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rkiA/nostruct-align/1rkiA.t06-thin90.a2m.gz # 1rkiA.t06-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.625635 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rkiA/info/1rkiA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rkiA/nostruct-align/1rkiA.t06-thin90.a2m.gz, have 68326 columns in 288 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1ji7A/nostruct-align/1ji7A.t06-thin90.a2m.gz # 1ji7A.t06-thin90.a2m with 96 sequences, total weight= 47.8095 avg weight= 0.498016 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1ji7A/info/1ji7A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1ji7A/nostruct-align/1ji7A.t06-thin90.a2m.gz, have 68403 columns in 289 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wd3A/nostruct-align/1wd3A.t06-thin90.a2m.gz # 1wd3A.t06-thin90.a2m with 76 sequences, total weight= 70.9116 avg weight= 0.933048 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wd3A/info/1wd3A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1wd3A/nostruct-align/1wd3A.t06-thin90.a2m.gz, have 68885 columns in 290 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q74A/nostruct-align/1q74A.t06-thin90.a2m.gz # 1q74A.t06-thin90.a2m with 431 sequences, total weight= 431 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.984225 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q74A/info/1q74A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1q74A/nostruct-align/1q74A.t06-thin90.a2m.gz, have 69172 columns in 291 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r7aA/nostruct-align/1r7aA.t06-thin90.a2m.gz # 1r7aA.t06-thin90.a2m with 1188 sequences, total weight= 1188 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.979401 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r7aA/info/1r7aA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1r7aA/nostruct-align/1r7aA.t06-thin90.a2m.gz, have 69676 columns in 292 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wd7A/nostruct-align/1wd7A.t06-thin90.a2m.gz # 1wd7A.t06-thin90.a2m with 454 sequences, total weight= 454 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07904 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wd7A/info/1wd7A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1wd7A/nostruct-align/1wd7A.t06-thin90.a2m.gz, have 69930 columns in 293 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sc3A/nostruct-align/1sc3A.t06-thin90.a2m.gz # 1sc3A.t06-thin90.a2m with 345 sequences, total weight= 345 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23798 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sc3A/info/1sc3A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1sc3A/nostruct-align/1sc3A.t06-thin90.a2m.gz, have 70103 columns in 294 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jyhA/nostruct-align/1jyhA.t06-thin90.a2m.gz # 1jyhA.t06-thin90.a2m with 391 sequences, total weight= 391 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.979361 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jyhA/info/1jyhA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jyhA/nostruct-align/1jyhA.t06-thin90.a2m.gz, have 70258 columns in 295 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m9zA/nostruct-align/1m9zA.t06-thin90.a2m.gz # 1m9zA.t06-thin90.a2m with 16 sequences, total weight= 4.95752 avg weight= 0.309845 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m9zA/info/1m9zA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1m9zA/nostruct-align/1m9zA.t06-thin90.a2m.gz, have 70363 columns in 296 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54A/nostruct-align/1v54A.t06-thin90.a2m.gz # 1v54A.t06-thin90.a2m with 1857 sequences, total weight= 15.3882 avg weight= 0.0082866 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54A/info/1v54A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1v54A/nostruct-align/1v54A.t06-thin90.a2m.gz, have 70877 columns in 297 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wddS/nostruct-align/1wddS.t06-thin90.a2m.gz # 1wddS.t06-thin90.a2m with 216 sequences, total weight= 12.2427 avg weight= 0.0566791 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wddS/info/1wddS.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1wddS/nostruct-align/1wddS.t06-thin90.a2m.gz, have 70999 columns in 298 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1udzA/nostruct-align/1udzA.t06-thin90.a2m.gz # 1udzA.t06-thin90.a2m with 1315 sequences, total weight= 350.049 avg weight= 0.266197 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32464 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1udzA/info/1udzA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1udzA/nostruct-align/1udzA.t06-thin90.a2m.gz, have 71178 columns in 299 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1luzA/nostruct-align/1luzA.t06-thin90.a2m.gz # 1luzA.t06-thin90.a2m with 11 sequences, total weight= 5.88033 avg weight= 0.534575 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1luzA/info/1luzA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1luzA/nostruct-align/1luzA.t06-thin90.a2m.gz, have 71263 columns in 300 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dc1A/nostruct-align/1dc1A.t06-thin90.a2m.gz # 1dc1A.t06-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14377 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dc1A/info/1dc1A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1dc1A/nostruct-align/1dc1A.t06-thin90.a2m.gz, have 71573 columns in 301 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rdqE/nostruct-align/1rdqE.t06-thin90.a2m.gz # 1rdqE.t06-thin90.a2m with 13999 sequences, total weight= 13999 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03755 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rdqE/info/1rdqE.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rdqE/nostruct-align/1rdqE.t06-thin90.a2m.gz, have 71915 columns in 302 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ye8A/nostruct-align/1ye8A.t06-thin90.a2m.gz # 1ye8A.t06-thin90.a2m with 7585 sequences, total weight= 7585 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.608942 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ye8A/info/1ye8A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1ye8A/nostruct-align/1ye8A.t06-thin90.a2m.gz, have 72087 columns in 303 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rliA/nostruct-align/1rliA.t06-thin90.a2m.gz # 1rliA.t06-thin90.a2m with 1861 sequences, total weight= 1861 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.978106 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rliA/info/1rliA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rliA/nostruct-align/1rliA.t06-thin90.a2m.gz, have 72243 columns in 304 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t06-thin90.a2m.gz # 1dosA.t06-thin90.a2m with 393 sequences, total weight= 49.8333 avg weight= 0.126802 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dosA/info/1dosA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t06-thin90.a2m.gz, have 72601 columns in 305 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fm0E/nostruct-align/1fm0E.t06-thin90.a2m.gz # 1fm0E.t06-thin90.a2m with 284 sequences, total weight= 41.5755 avg weight= 0.146392 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30062 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fm0E/info/1fm0E.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1fm0E/nostruct-align/1fm0E.t06-thin90.a2m.gz, have 72743 columns in 306 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iqzA/nostruct-align/1iqzA.t06-thin90.a2m.gz # 1iqzA.t06-thin90.a2m with 323 sequences, total weight= 323 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23998 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iqzA/info/1iqzA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1iqzA/nostruct-align/1iqzA.t06-thin90.a2m.gz, have 72824 columns in 307 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d7pM/nostruct-align/1d7pM.t06-thin90.a2m.gz # 1d7pM.t06-thin90.a2m with 423 sequences, total weight= 91.4242 avg weight= 0.216133 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30301 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d7pM/info/1d7pM.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1d7pM/nostruct-align/1d7pM.t06-thin90.a2m.gz, have 72983 columns in 308 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qwoA/nostruct-align/1qwoA.t06-thin90.a2m.gz # 1qwoA.t06-thin90.a2m with 463 sequences, total weight= 463 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.937488 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qwoA/info/1qwoA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qwoA/nostruct-align/1qwoA.t06-thin90.a2m.gz, have 73418 columns in 309 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lst/nostruct-align/1lst.t06-thin90.a2m.gz # 1lst.t06-thin90.a2m with 2998 sequences, total weight= 2998 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.950151 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lst/info/1lst.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1lst/nostruct-align/1lst.t06-thin90.a2m.gz, have 73656 columns in 310 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hdkA/nostruct-align/1hdkA.t06-thin90.a2m.gz # 1hdkA.t06-thin90.a2m with 346 sequences, total weight= 346 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28817 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hdkA/info/1hdkA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1hdkA/nostruct-align/1hdkA.t06-thin90.a2m.gz, have 73795 columns in 311 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k1eA/nostruct-align/1k1eA.t06-thin90.a2m.gz # 1k1eA.t06-thin90.a2m with 255 sequences, total weight= 160.426 avg weight= 0.629122 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30216 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k1eA/info/1k1eA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1k1eA/nostruct-align/1k1eA.t06-thin90.a2m.gz, have 73972 columns in 312 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hft/nostruct-align/2hft.t06-thin90.a2m.gz # 2hft.t06-thin90.a2m with 338 sequences, total weight= 338 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03702 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hft/info/2hft.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2h/2hft/nostruct-align/2hft.t06-thin90.a2m.gz, have 74177 columns in 313 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bkf/nostruct-align/1bkf.t06-thin90.a2m.gz # 1bkf.t06-thin90.a2m with 998 sequences, total weight= 94.0515 avg weight= 0.0942399 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30728 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bkf/info/1bkf.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1b/1bkf/nostruct-align/1bkf.t06-thin90.a2m.gz, have 74284 columns in 314 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m22A/nostruct-align/1m22A.t06-thin90.a2m.gz # 1m22A.t06-thin90.a2m with 1342 sequences, total weight= 1233.2 avg weight= 0.918927 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30211 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m22A/info/1m22A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1m22A/nostruct-align/1m22A.t06-thin90.a2m.gz, have 74771 columns in 315 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ew6A/nostruct-align/1ew6A.t06-thin90.a2m.gz # 1ew6A.t06-thin90.a2m with 121 sequences, total weight= 121 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24306 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ew6A/info/1ew6A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1ew6A/nostruct-align/1ew6A.t06-thin90.a2m.gz, have 74908 columns in 316 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nacA/nostruct-align/2nacA.t06-thin90.a2m.gz # 2nacA.t06-thin90.a2m with 2261 sequences, total weight= 2261 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19607 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nacA/info/2nacA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2n/2nacA/nostruct-align/2nacA.t06-thin90.a2m.gz, have 75282 columns in 317 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h97A/nostruct-align/1h97A.t06-thin90.a2m.gz # 1h97A.t06-thin90.a2m with 270 sequences, total weight= 270 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25119 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h97A/info/1h97A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1h97A/nostruct-align/1h97A.t06-thin90.a2m.gz, have 75429 columns in 318 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vd5A/nostruct-align/1vd5A.t06-thin90.a2m.gz # 1vd5A.t06-thin90.a2m with 650 sequences, total weight= 650 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.842606 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vd5A/info/1vd5A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vd5A/nostruct-align/1vd5A.t06-thin90.a2m.gz, have 75806 columns in 319 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dp7P/nostruct-align/1dp7P.t06-thin90.a2m.gz # 1dp7P.t06-thin90.a2m with 51 sequences, total weight= 10.5913 avg weight= 0.207672 31 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dp7P/info/1dp7P.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1dp7P/nostruct-align/1dp7P.t06-thin90.a2m.gz, have 75882 columns in 320 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sj1A/nostruct-align/1sj1A.t06-thin90.a2m.gz # 1sj1A.t06-thin90.a2m with 295 sequences, total weight= 81.022 avg weight= 0.274651 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30301 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sj1A/info/1sj1A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1sj1A/nostruct-align/1sj1A.t06-thin90.a2m.gz, have 75948 columns in 321 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rz2A/nostruct-align/1rz2A.t06-thin90.a2m.gz # 1rz2A.t06-thin90.a2m with 16 sequences, total weight= 12.1955 avg weight= 0.762216 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rz2A/info/1rz2A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rz2A/nostruct-align/1rz2A.t06-thin90.a2m.gz, have 76162 columns in 322 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tkeA/nostruct-align/1tkeA.t06-thin90.a2m.gz # 1tkeA.t06-thin90.a2m with 960 sequences, total weight= 246.972 avg weight= 0.257263 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31426 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tkeA/info/1tkeA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1tkeA/nostruct-align/1tkeA.t06-thin90.a2m.gz, have 76386 columns in 323 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rhs/nostruct-align/1rhs.t06-thin90.a2m.gz # 1rhs.t06-thin90.a2m with 2064 sequences, total weight= 2064 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01341 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rhs/info/1rhs.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rhs/nostruct-align/1rhs.t06-thin90.a2m.gz, have 76679 columns in 324 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iooA/nostruct-align/1iooA.t06-thin90.a2m.gz # 1iooA.t06-thin90.a2m with 611 sequences, total weight= 611 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29794 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iooA/info/1iooA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1iooA/nostruct-align/1iooA.t06-thin90.a2m.gz, have 76875 columns in 325 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k3xA/nostruct-align/1k3xA.t06-thin90.a2m.gz # 1k3xA.t06-thin90.a2m with 442 sequences, total weight= 67.8841 avg weight= 0.153584 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30234 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k3xA/info/1k3xA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1k3xA/nostruct-align/1k3xA.t06-thin90.a2m.gz, have 77128 columns in 326 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rjoA/nostruct-align/1rjoA.t06-thin90.a2m.gz # 1rjoA.t06-thin90.a2m with 172 sequences, total weight= 48.1399 avg weight= 0.279883 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rjoA/info/1rjoA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rjoA/nostruct-align/1rjoA.t06-thin90.a2m.gz, have 77748 columns in 327 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h75A/nostruct-align/1h75A.t06-thin90.a2m.gz # 1h75A.t06-thin90.a2m with 1625 sequences, total weight= 1625 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24079 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h75A/info/1h75A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1h75A/nostruct-align/1h75A.t06-thin90.a2m.gz, have 77824 columns in 328 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oqvA/nostruct-align/1oqvA.t06-thin90.a2m.gz # 1oqvA.t06-thin90.a2m with 15 sequences, total weight= 5.4721 avg weight= 0.364807 19 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oqvA/info/1oqvA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1oqvA/nostruct-align/1oqvA.t06-thin90.a2m.gz, have 77995 columns in 329 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w53A/nostruct-align/1w53A.t06-thin90.a2m.gz # 1w53A.t06-thin90.a2m with 8 sequences, total weight= 4.16675 avg weight= 0.520844 15 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w53A/info/1w53A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1w53A/nostruct-align/1w53A.t06-thin90.a2m.gz, have 78079 columns in 330 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n08A/nostruct-align/1n08A.t06-thin90.a2m.gz # 1n08A.t06-thin90.a2m with 386 sequences, total weight= 56.6626 avg weight= 0.146794 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30117 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n08A/info/1n08A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1n08A/nostruct-align/1n08A.t06-thin90.a2m.gz, have 78233 columns in 331 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uzbA/nostruct-align/1uzbA.t06-thin90.a2m.gz # 1uzbA.t06-thin90.a2m with 4162 sequences, total weight= 4162 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26416 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uzbA/info/1uzbA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1uzbA/nostruct-align/1uzbA.t06-thin90.a2m.gz, have 78749 columns in 332 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1isuA/nostruct-align/1isuA.t06-thin90.a2m.gz # 1isuA.t06-thin90.a2m with 46 sequences, total weight= 15.4166 avg weight= 0.335143 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1isuA/info/1isuA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1isuA/nostruct-align/1isuA.t06-thin90.a2m.gz, have 78811 columns in 333 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yc9A/nostruct-align/1yc9A.t06-thin90.a2m.gz # 1yc9A.t06-thin90.a2m with 1805 sequences, total weight= 1805 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.977836 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yc9A/info/1yc9A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1yc9A/nostruct-align/1yc9A.t06-thin90.a2m.gz, have 79222 columns in 334 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cl8A/nostruct-align/1cl8A.t06-thin90.a2m.gz # 1cl8A.t06-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05471 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cl8A/info/1cl8A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1c/1cl8A/nostruct-align/1cl8A.t06-thin90.a2m.gz, have 79483 columns in 335 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qtwA/nostruct-align/1qtwA.t06-thin90.a2m.gz # 1qtwA.t06-thin90.a2m with 1209 sequences, total weight= 1209 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.921909 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qtwA/info/1qtwA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qtwA/nostruct-align/1qtwA.t06-thin90.a2m.gz, have 79768 columns in 336 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uwcA/nostruct-align/1uwcA.t06-thin90.a2m.gz # 1uwcA.t06-thin90.a2m with 1343 sequences, total weight= 1343 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.83521 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uwcA/info/1uwcA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1uwcA/nostruct-align/1uwcA.t06-thin90.a2m.gz, have 80029 columns in 337 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o7jA/nostruct-align/1o7jA.t06-thin90.a2m.gz # 1o7jA.t06-thin90.a2m with 353 sequences, total weight= 95.2381 avg weight= 0.269796 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30354 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o7jA/info/1o7jA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1o7jA/nostruct-align/1o7jA.t06-thin90.a2m.gz, have 80354 columns in 338 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uvqA/nostruct-align/1uvqA.t06-thin90.a2m.gz # 1uvqA.t06-thin90.a2m with 3022 sequences, total weight= 3022 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15061 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uvqA/info/1uvqA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1uvqA/nostruct-align/1uvqA.t06-thin90.a2m.gz, have 80536 columns in 339 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lo7A/nostruct-align/1lo7A.t06-thin90.a2m.gz # 1lo7A.t06-thin90.a2m with 1341 sequences, total weight= 1341 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.977081 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lo7A/info/1lo7A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1lo7A/nostruct-align/1lo7A.t06-thin90.a2m.gz, have 80676 columns in 340 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xtyA/nostruct-align/1xtyA.t06-thin90.a2m.gz # 1xtyA.t06-thin90.a2m with 120 sequences, total weight= 24.3114 avg weight= 0.202595 42 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xtyA/info/1xtyA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xtyA/nostruct-align/1xtyA.t06-thin90.a2m.gz, have 80796 columns in 341 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sg4A/nostruct-align/1sg4A.t06-thin90.a2m.gz # 1sg4A.t06-thin90.a2m with 3014 sequences, total weight= 3014 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20137 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sg4A/info/1sg4A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1sg4A/nostruct-align/1sg4A.t06-thin90.a2m.gz, have 81045 columns in 342 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1juvA/nostruct-align/1juvA.t06-thin90.a2m.gz # 1juvA.t06-thin90.a2m with 568 sequences, total weight= 568 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21444 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1juvA/info/1juvA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1juvA/nostruct-align/1juvA.t06-thin90.a2m.gz, have 81238 columns in 343 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d1qA/nostruct-align/1d1qA.t06-thin90.a2m.gz # 1d1qA.t06-thin90.a2m with 752 sequences, total weight= 593.815 avg weight= 0.789648 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30478 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d1qA/info/1d1qA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1d1qA/nostruct-align/1d1qA.t06-thin90.a2m.gz, have 81397 columns in 344 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e0cA/nostruct-align/1e0cA.t06-thin90.a2m.gz # 1e0cA.t06-thin90.a2m with 2288 sequences, total weight= 2288 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.998632 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e0cA/info/1e0cA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1e0cA/nostruct-align/1e0cA.t06-thin90.a2m.gz, have 81668 columns in 345 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qtnB/nostruct-align/1qtnB.t06-thin90.a2m.gz # 1qtnB.t06-thin90.a2m with 169 sequences, total weight= 38.2499 avg weight= 0.226331 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qtnB/info/1qtnB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qtnB/nostruct-align/1qtnB.t06-thin90.a2m.gz, have 81758 columns in 346 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n3lA/nostruct-align/1n3lA.t06-thin90.a2m.gz # 1n3lA.t06-thin90.a2m with 1122 sequences, total weight= 1122 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15429 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n3lA/info/1n3lA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1n3lA/nostruct-align/1n3lA.t06-thin90.a2m.gz, have 82090 columns in 347 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1us0A/nostruct-align/1us0A.t06-thin90.a2m.gz # 1us0A.t06-thin90.a2m with 2643 sequences, total weight= 2643 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24832 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1us0A/info/1us0A.stride-mixed.n_notor WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1u/1us0A/nostruct-align/1us0A.t06-thin90.a2m.gz, have 82403 columns in 348 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i0dA/nostruct-align/1i0dA.t06-thin90.a2m.gz # 1i0dA.t06-thin90.a2m with 2168 sequences, total weight= 2168 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.871582 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i0dA/info/1i0dA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1i0dA/nostruct-align/1i0dA.t06-thin90.a2m.gz, have 82734 columns in 349 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q7eA/nostruct-align/1q7eA.t06-thin90.a2m.gz # 1q7eA.t06-thin90.a2m with 1038 sequences, total weight= 207.364 avg weight= 0.199773 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31441 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q7eA/info/1q7eA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1q7eA/nostruct-align/1q7eA.t06-thin90.a2m.gz, have 83144 columns in 350 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1txgA/nostruct-align/1txgA.t06-thin90.a2m.gz # 1txgA.t06-thin90.a2m with 5255 sequences, total weight= 5255 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.851344 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1txgA/info/1txgA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1txgA/nostruct-align/1txgA.t06-thin90.a2m.gz, have 83479 columns in 351 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xkiA/nostruct-align/1xkiA.t06-thin90.a2m.gz # 1xkiA.t06-thin90.a2m with 458 sequences, total weight= 458 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06881 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xkiA/info/1xkiA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xkiA/nostruct-align/1xkiA.t06-thin90.a2m.gz, have 83607 columns in 352 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nwaA/nostruct-align/1nwaA.t06-thin90.a2m.gz # 1nwaA.t06-thin90.a2m with 593 sequences, total weight= 22.7815 avg weight= 0.0384173 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nwaA/info/1nwaA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nwaA/nostruct-align/1nwaA.t06-thin90.a2m.gz, have 83775 columns in 353 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wp5A/nostruct-align/1wp5A.t06-thin90.a2m.gz # 1wp5A.t06-thin90.a2m with 527 sequences, total weight= 163.111 avg weight= 0.309508 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30821 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wp5A/info/1wp5A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1wp5A/nostruct-align/1wp5A.t06-thin90.a2m.gz, have 84098 columns in 354 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r5lA/nostruct-align/1r5lA.t06-thin90.a2m.gz # 1r5lA.t06-thin90.a2m with 672 sequences, total weight= 672 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.998433 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r5lA/info/1r5lA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1r5lA/nostruct-align/1r5lA.t06-thin90.a2m.gz, have 84349 columns in 355 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rc9A/nostruct-align/1rc9A.t06-thin90.a2m.gz # 1rc9A.t06-thin90.a2m with 657 sequences, total weight= 657 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22737 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rc9A/info/1rc9A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rc9A/nostruct-align/1rc9A.t06-thin90.a2m.gz, have 84570 columns in 356 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54E/nostruct-align/1v54E.t06-thin90.a2m.gz # 1v54E.t06-thin90.a2m with 33 sequences, total weight= 5.33382 avg weight= 0.161631 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54E/info/1v54E.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1v54E/nostruct-align/1v54E.t06-thin90.a2m.gz, have 84675 columns in 357 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1odzA/nostruct-align/1odzA.t06-thin90.a2m.gz # 1odzA.t06-thin90.a2m with 151 sequences, total weight= 151 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.961778 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1odzA/info/1odzA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1odzA/nostruct-align/1odzA.t06-thin90.a2m.gz, have 85054 columns in 358 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kw3B/nostruct-align/1kw3B.t06-thin90.a2m.gz # 1kw3B.t06-thin90.a2m with 2358 sequences, total weight= 2358 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.955332 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kw3B/info/1kw3B.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kw3B/nostruct-align/1kw3B.t06-thin90.a2m.gz, have 85342 columns in 359 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ug6A/nostruct-align/1ug6A.t06-thin90.a2m.gz # 1ug6A.t06-thin90.a2m with 815 sequences, total weight= 95.6627 avg weight= 0.117378 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30435 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ug6A/info/1ug6A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1ug6A/nostruct-align/1ug6A.t06-thin90.a2m.gz, have 85768 columns in 360 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oi2A/nostruct-align/1oi2A.t06-thin90.a2m.gz # 1oi2A.t06-thin90.a2m with 194 sequences, total weight= 17.1669 avg weight= 0.0884891 42 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oi2A/info/1oi2A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1oi2A/nostruct-align/1oi2A.t06-thin90.a2m.gz, have 86104 columns in 361 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p5vA/nostruct-align/1p5vA.t06-thin90.a2m.gz # 1p5vA.t06-thin90.a2m with 331 sequences, total weight= 224.604 avg weight= 0.678561 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30425 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p5vA/info/1p5vA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1p5vA/nostruct-align/1p5vA.t06-thin90.a2m.gz, have 86295 columns in 362 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gudA/nostruct-align/1gudA.t06-thin90.a2m.gz # 1gudA.t06-thin90.a2m with 624 sequences, total weight= 624 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.947007 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gudA/info/1gudA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gudA/nostruct-align/1gudA.t06-thin90.a2m.gz, have 86583 columns in 363 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cmcA/nostruct-align/1cmcA.t06-thin90.a2m.gz # 1cmcA.t06-thin90.a2m with 18 sequences, total weight= 2.43404 avg weight= 0.135225 12 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cmcA/info/1cmcA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1c/1cmcA/nostruct-align/1cmcA.t06-thin90.a2m.gz, have 86687 columns in 364 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k7iA/nostruct-align/1k7iA.t06-thin90.a2m.gz # 1k7iA.t06-thin90.a2m with 1798 sequences, total weight= 1798 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22608 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k7iA/info/1k7iA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1k7iA/nostruct-align/1k7iA.t06-thin90.a2m.gz, have 87149 columns in 365 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a8o/nostruct-align/1a8o.t06-thin90.a2m.gz # 1a8o.t06-thin90.a2m with 172 sequences, total weight= 12.4788 avg weight= 0.0725509 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a8o/info/1a8o.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1a/1a8o/nostruct-align/1a8o.t06-thin90.a2m.gz, have 87219 columns in 366 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o54A/nostruct-align/1o54A.t06-thin90.a2m.gz # 1o54A.t06-thin90.a2m with 15548 sequences, total weight= 15548 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.690502 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o54A/info/1o54A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1o54A/nostruct-align/1o54A.t06-thin90.a2m.gz, have 87484 columns in 367 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gxmA/nostruct-align/1gxmA.t06-thin90.a2m.gz # 1gxmA.t06-thin90.a2m with 291 sequences, total weight= 291 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1724 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gxmA/info/1gxmA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gxmA/nostruct-align/1gxmA.t06-thin90.a2m.gz, have 87808 columns in 368 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fdn/nostruct-align/2fdn.t06-thin90.a2m.gz # 2fdn.t06-thin90.a2m with 402 sequences, total weight= 21.8142 avg weight= 0.0542643 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30039 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fdn/info/2fdn.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2f/2fdn/nostruct-align/2fdn.t06-thin90.a2m.gz, have 87863 columns in 369 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g55A/nostruct-align/1g55A.t06-thin90.a2m.gz # 1g55A.t06-thin90.a2m with 685 sequences, total weight= 685 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06869 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g55A/info/1g55A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1g55A/nostruct-align/1g55A.t06-thin90.a2m.gz, have 88176 columns in 370 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l6xA/nostruct-align/1l6xA.t06-thin90.a2m.gz # 1l6xA.t06-thin90.a2m with 5631 sequences, total weight= 111.968 avg weight= 0.0198842 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3116 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l6xA/info/1l6xA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1l6xA/nostruct-align/1l6xA.t06-thin90.a2m.gz, have 88383 columns in 371 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1smbA/nostruct-align/1smbA.t06-thin90.a2m.gz # 1smbA.t06-thin90.a2m with 661 sequences, total weight= 661 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23322 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1smbA/info/1smbA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1smbA/nostruct-align/1smbA.t06-thin90.a2m.gz, have 88532 columns in 372 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qjpA/nostruct-align/1qjpA.t06-thin90.a2m.gz # 1qjpA.t06-thin90.a2m with 585 sequences, total weight= 585 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1959 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qjpA/info/1qjpA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qjpA/nostruct-align/1qjpA.t06-thin90.a2m.gz, have 88669 columns in 373 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wddA/nostruct-align/1wddA.t06-thin90.a2m.gz # 1wddA.t06-thin90.a2m with 977 sequences, total weight= 22.1532 avg weight= 0.0226747 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wddA/info/1wddA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1wddA/nostruct-align/1wddA.t06-thin90.a2m.gz, have 89134 columns in 374 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ufyA/nostruct-align/1ufyA.t06-thin90.a2m.gz # 1ufyA.t06-thin90.a2m with 59 sequences, total weight= 7.43478 avg weight= 0.126013 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ufyA/info/1ufyA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1ufyA/nostruct-align/1ufyA.t06-thin90.a2m.gz, have 89255 columns in 375 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ouwA/nostruct-align/1ouwA.t06-thin90.a2m.gz # 1ouwA.t06-thin90.a2m with 275 sequences, total weight= 124.78 avg weight= 0.453746 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30269 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ouwA/info/1ouwA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1ouwA/nostruct-align/1ouwA.t06-thin90.a2m.gz, have 89404 columns in 376 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oksA/nostruct-align/1oksA.t06-thin90.a2m.gz # 1oksA.t06-thin90.a2m with 5 sequences, total weight= 3.01005 avg weight= 0.60201 9 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oksA/info/1oksA.stride-mixed.n_notor WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1o/1oksA/nostruct-align/1oksA.t06-thin90.a2m.gz, have 89457 columns in 377 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mk0A/nostruct-align/1mk0A.t06-thin90.a2m.gz # 1mk0A.t06-thin90.a2m with 74 sequences, total weight= 74 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27476 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mk0A/info/1mk0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mk0A/nostruct-align/1mk0A.t06-thin90.a2m.gz, have 89554 columns in 378 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nnfA/nostruct-align/1nnfA.t06-thin90.a2m.gz # 1nnfA.t06-thin90.a2m with 2960 sequences, total weight= 2960 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.840711 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nnfA/info/1nnfA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nnfA/nostruct-align/1nnfA.t06-thin90.a2m.gz, have 89862 columns in 379 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ummA/nostruct-align/1ummA.t06-thin90.a2m.gz # 1ummA.t06-thin90.a2m with 2555 sequences, total weight= 2555 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.960519 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ummA/info/1ummA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1ummA/nostruct-align/1ummA.t06-thin90.a2m.gz, have 90011 columns in 380 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2arcA/nostruct-align/2arcA.t06-thin90.a2m.gz # 2arcA.t06-thin90.a2m with 36 sequences, total weight= 36 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06271 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2arcA/info/2arcA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2a/2arcA/nostruct-align/2arcA.t06-thin90.a2m.gz, have 90172 columns in 381 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v05A/nostruct-align/1v05A.t06-thin90.a2m.gz # 1v05A.t06-thin90.a2m with 753 sequences, total weight= 337.247 avg weight= 0.447871 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31291 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v05A/info/1v05A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1v05A/nostruct-align/1v05A.t06-thin90.a2m.gz, have 90268 columns in 382 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u0fA/nostruct-align/1u0fA.t06-thin90.a2m.gz # 1u0fA.t06-thin90.a2m with 513 sequences, total weight= 68.2237 avg weight= 0.13299 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30077 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u0fA/info/1u0fA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1u0fA/nostruct-align/1u0fA.t06-thin90.a2m.gz, have 90824 columns in 383 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nfp/nostruct-align/1nfp.t06-thin90.a2m.gz # 1nfp.t06-thin90.a2m with 510 sequences, total weight= 510 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12538 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nfp/info/1nfp.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nfp/nostruct-align/1nfp.t06-thin90.a2m.gz, have 91052 columns in 384 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gppA/nostruct-align/1gppA.t06-thin90.a2m.gz # 1gppA.t06-thin90.a2m with 57 sequences, total weight= 57 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2516 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gppA/info/1gppA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gppA/nostruct-align/1gppA.t06-thin90.a2m.gz, have 91269 columns in 385 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i88A/nostruct-align/1i88A.t06-thin90.a2m.gz # 1i88A.t06-thin90.a2m with 1184 sequences, total weight= 1184 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1385 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i88A/info/1i88A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1i88A/nostruct-align/1i88A.t06-thin90.a2m.gz, have 91658 columns in 386 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3c/3cla/nostruct-align/3cla.t06-thin90.a2m.gz # 3cla.t06-thin90.a2m with 848 sequences, total weight= 252.592 avg weight= 0.297868 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31483 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3c/3cla/info/3cla.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/3c/3cla/nostruct-align/3cla.t06-thin90.a2m.gz, have 91871 columns in 387 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iyhA/nostruct-align/1iyhA.t06-thin90.a2m.gz # 1iyhA.t06-thin90.a2m with 3515 sequences, total weight= 3515 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01243 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iyhA/info/1iyhA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1iyhA/nostruct-align/1iyhA.t06-thin90.a2m.gz, have 92069 columns in 388 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qgeE/nostruct-align/1qgeE.t06-thin90.a2m.gz # 1qgeE.t06-thin90.a2m with 50 sequences, total weight= 7.56602 avg weight= 0.15132 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qgeE/info/1qgeE.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qgeE/nostruct-align/1qgeE.t06-thin90.a2m.gz, have 92166 columns in 389 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eca/nostruct-align/1eca.t06-thin90.a2m.gz # 1eca.t06-thin90.a2m with 1049 sequences, total weight= 1049 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24872 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eca/info/1eca.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1eca/nostruct-align/1eca.t06-thin90.a2m.gz, have 92302 columns in 390 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p1mA/nostruct-align/1p1mA.t06-thin90.a2m.gz # 1p1mA.t06-thin90.a2m with 3318 sequences, total weight= 3318 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.87649 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p1mA/info/1p1mA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1p1mA/nostruct-align/1p1mA.t06-thin90.a2m.gz, have 92706 columns in 391 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54F/nostruct-align/1v54F.t06-thin90.a2m.gz # 1v54F.t06-thin90.a2m with 53 sequences, total weight= 17.0692 avg weight= 0.32206 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54F/info/1v54F.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1v54F/nostruct-align/1v54F.t06-thin90.a2m.gz, have 92804 columns in 392 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kqwA/nostruct-align/1kqwA.t06-thin90.a2m.gz # 1kqwA.t06-thin90.a2m with 313 sequences, total weight= 55.1441 avg weight= 0.176179 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kqwA/info/1kqwA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kqwA/nostruct-align/1kqwA.t06-thin90.a2m.gz, have 92938 columns in 393 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v5iB/nostruct-align/1v5iB.t06-thin90.a2m.gz # 1v5iB.t06-thin90.a2m with 26 sequences, total weight= 12.761 avg weight= 0.490809 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v5iB/info/1v5iB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1v5iB/nostruct-align/1v5iB.t06-thin90.a2m.gz, have 93014 columns in 394 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1erw/nostruct-align/1erw.t06-thin90.a2m.gz # 1erw.t06-thin90.a2m with 4002 sequences, total weight= 4002 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05559 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1erw/info/1erw.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1erw/nostruct-align/1erw.t06-thin90.a2m.gz, have 93119 columns in 395 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1in6A/nostruct-align/1in6A.t06-thin90.a2m.gz # 1in6A.t06-thin90.a2m with 12513 sequences, total weight= 12513 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.891933 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1in6A/info/1in6A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1in6A/nostruct-align/1in6A.t06-thin90.a2m.gz, have 93419 columns in 396 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p57A/nostruct-align/1p57A.t06-thin90.a2m.gz # 1p57A.t06-thin90.a2m with 6 sequences, total weight= 2.79798 avg weight= 0.46633 10 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p57A/info/1p57A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1p57A/nostruct-align/1p57A.t06-thin90.a2m.gz, have 93529 columns in 397 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jetA/nostruct-align/1jetA.t06-thin90.a2m.gz # 1jetA.t06-thin90.a2m with 1961 sequences, total weight= 1961 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05276 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jetA/info/1jetA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jetA/nostruct-align/1jetA.t06-thin90.a2m.gz, have 94046 columns in 398 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gbs/nostruct-align/1gbs.t06-thin90.a2m.gz # 1gbs.t06-thin90.a2m with 1037 sequences, total weight= 1037 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08084 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gbs/info/1gbs.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gbs/nostruct-align/1gbs.t06-thin90.a2m.gz, have 94231 columns in 399 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vlyA/nostruct-align/1vlyA.t06-thin90.a2m.gz # 1vlyA.t06-thin90.a2m with 933 sequences, total weight= 933 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23841 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vlyA/info/1vlyA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vlyA/nostruct-align/1vlyA.t06-thin90.a2m.gz, have 94554 columns in 400 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vp8A/nostruct-align/1vp8A.t06-thin90.a2m.gz # 1vp8A.t06-thin90.a2m with 15 sequences, total weight= 5.20419 avg weight= 0.346946 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vp8A/info/1vp8A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vp8A/nostruct-align/1vp8A.t06-thin90.a2m.gz, have 94744 columns in 401 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mqkH/nostruct-align/1mqkH.t06-thin90.a2m.gz # 1mqkH.t06-thin90.a2m with 12609 sequences, total weight= 20.3917 avg weight= 0.00161724 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mqkH/info/1mqkH.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mqkH/nostruct-align/1mqkH.t06-thin90.a2m.gz, have 94867 columns in 402 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m7gA/nostruct-align/1m7gA.t06-thin90.a2m.gz # 1m7gA.t06-thin90.a2m with 5405 sequences, total weight= 5405 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.886323 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m7gA/info/1m7gA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1m7gA/nostruct-align/1m7gA.t06-thin90.a2m.gz, have 95075 columns in 403 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gkmA/nostruct-align/1gkmA.t06-thin90.a2m.gz # 1gkmA.t06-thin90.a2m with 347 sequences, total weight= 34.805 avg weight= 0.100303 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gkmA/info/1gkmA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gkmA/nostruct-align/1gkmA.t06-thin90.a2m.gz, have 95584 columns in 404 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oi0A/nostruct-align/1oi0A.t06-thin90.a2m.gz # 1oi0A.t06-thin90.a2m with 283 sequences, total weight= 283 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19343 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oi0A/info/1oi0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1oi0A/nostruct-align/1oi0A.t06-thin90.a2m.gz, have 95692 columns in 405 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tu9A/nostruct-align/1tu9A.t06-thin90.a2m.gz # 1tu9A.t06-thin90.a2m with 748 sequences, total weight= 748 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16631 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tu9A/info/1tu9A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1tu9A/nostruct-align/1tu9A.t06-thin90.a2m.gz, have 95823 columns in 406 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xzoA/nostruct-align/1xzoA.t06-thin90.a2m.gz # 1xzoA.t06-thin90.a2m with 4073 sequences, total weight= 4073 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01719 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xzoA/info/1xzoA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xzoA/nostruct-align/1xzoA.t06-thin90.a2m.gz, have 95995 columns in 407 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yllA/nostruct-align/1yllA.t06-thin90.a2m.gz # 1yllA.t06-thin90.a2m with 69 sequences, total weight= 59.7974 avg weight= 0.866629 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yllA/info/1yllA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1yllA/nostruct-align/1yllA.t06-thin90.a2m.gz, have 96185 columns in 408 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xmzA/nostruct-align/1xmzA.t06-thin90.a2m.gz # 1xmzA.t06-thin90.a2m with 89 sequences, total weight= 16.0112 avg weight= 0.179901 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xmzA/info/1xmzA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xmzA/nostruct-align/1xmzA.t06-thin90.a2m.gz, have 96409 columns in 409 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1aba/nostruct-align/1aba.t06-thin90.a2m.gz # 1aba.t06-thin90.a2m with 834 sequences, total weight= 438.584 avg weight= 0.52588 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31045 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1aba/info/1aba.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1a/1aba/nostruct-align/1aba.t06-thin90.a2m.gz, have 96496 columns in 410 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i24A/nostruct-align/1i24A.t06-thin90.a2m.gz # 1i24A.t06-thin90.a2m with 13040 sequences, total weight= 13040 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.882695 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i24A/info/1i24A.stride-mixed.n_notor WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1i/1i24A/nostruct-align/1i24A.t06-thin90.a2m.gz, have 96888 columns in 411 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dk8A/nostruct-align/1dk8A.t06-thin90.a2m.gz # 1dk8A.t06-thin90.a2m with 378 sequences, total weight= 378 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16995 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dk8A/info/1dk8A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1dk8A/nostruct-align/1dk8A.t06-thin90.a2m.gz, have 97035 columns in 412 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gttA/nostruct-align/1gttA.t06-thin90.a2m.gz # 1gttA.t06-thin90.a2m with 1061 sequences, total weight= 43.3041 avg weight= 0.0408144 37 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gttA/info/1gttA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gttA/nostruct-align/1gttA.t06-thin90.a2m.gz, have 97456 columns in 413 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eokA/nostruct-align/1eokA.t06-thin90.a2m.gz # 1eokA.t06-thin90.a2m with 97 sequences, total weight= 97 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10013 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eokA/info/1eokA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1eokA/nostruct-align/1eokA.t06-thin90.a2m.gz, have 97738 columns in 414 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m6kA/nostruct-align/1m6kA.t06-thin90.a2m.gz # 1m6kA.t06-thin90.a2m with 2347 sequences, total weight= 2347 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09613 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m6kA/info/1m6kA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1m6kA/nostruct-align/1m6kA.t06-thin90.a2m.gz, have 97988 columns in 415 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3l/3lzt/nostruct-align/3lzt.t06-thin90.a2m.gz # 3lzt.t06-thin90.a2m with 191 sequences, total weight= 22.0972 avg weight= 0.115692 43 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3l/3lzt/info/3lzt.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/3l/3lzt/nostruct-align/3lzt.t06-thin90.a2m.gz, have 98117 columns in 416 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nrjA/nostruct-align/1nrjA.t06-thin90.a2m.gz # 1nrjA.t06-thin90.a2m with 4 sequences, total weight= 3.96601 avg weight= 0.991502 9 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nrjA/info/1nrjA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nrjA/nostruct-align/1nrjA.t06-thin90.a2m.gz, have 98264 columns in 417 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bbkH/nostruct-align/2bbkH.t06-thin90.a2m.gz # 2bbkH.t06-thin90.a2m with 6591 sequences, total weight= 6591 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.758137 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bbkH/info/2bbkH.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2b/2bbkH/nostruct-align/2bbkH.t06-thin90.a2m.gz, have 98619 columns in 418 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1ls1A/nostruct-align/1ls1A.t06-thin90.a2m.gz # 1ls1A.t06-thin90.a2m with 2020 sequences, total weight= 2020 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05986 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1ls1A/info/1ls1A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1ls1A/nostruct-align/1ls1A.t06-thin90.a2m.gz, have 98908 columns in 419 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hp1A/nostruct-align/1hp1A.t06-thin90.a2m.gz # 1hp1A.t06-thin90.a2m with 1324 sequences, total weight= 1324 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.982152 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hp1A/info/1hp1A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1hp1A/nostruct-align/1hp1A.t06-thin90.a2m.gz, have 99424 columns in 420 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x6iA/nostruct-align/1x6iA.t06-thin90.a2m.gz # 1x6iA.t06-thin90.a2m with 180 sequences, total weight= 67.7434 avg weight= 0.376352 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30131 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x6iA/info/1x6iA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1x6iA/nostruct-align/1x6iA.t06-thin90.a2m.gz, have 99513 columns in 421 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2t/2tgi/nostruct-align/2tgi.t06-thin90.a2m.gz # 2tgi.t06-thin90.a2m with 410 sequences, total weight= 59.1391 avg weight= 0.144242 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30116 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2t/2tgi/info/2tgi.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2t/2tgi/nostruct-align/2tgi.t06-thin90.a2m.gz, have 99625 columns in 422 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gqiA/nostruct-align/1gqiA.t06-thin90.a2m.gz # 1gqiA.t06-thin90.a2m with 40 sequences, total weight= 16.4558 avg weight= 0.411394 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gqiA/info/1gqiA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gqiA/nostruct-align/1gqiA.t06-thin90.a2m.gz, have 100333 columns in 423 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gmiA/nostruct-align/1gmiA.t06-thin90.a2m.gz # 1gmiA.t06-thin90.a2m with 2217 sequences, total weight= 2217 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00794 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gmiA/info/1gmiA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gmiA/nostruct-align/1gmiA.t06-thin90.a2m.gz, have 100468 columns in 424 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h12A/nostruct-align/1h12A.t06-thin90.a2m.gz # 1h12A.t06-thin90.a2m with 101 sequences, total weight= 101 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h12A/info/1h12A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1h12A/nostruct-align/1h12A.t06-thin90.a2m.gz, have 100872 columns in 425 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w8kA/nostruct-align/1w8kA.t06-thin90.a2m.gz # 1w8kA.t06-thin90.a2m with 43 sequences, total weight= 15.5058 avg weight= 0.360599 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w8kA/info/1w8kA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1w8kA/nostruct-align/1w8kA.t06-thin90.a2m.gz, have 101234 columns in 426 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jl0A/nostruct-align/1jl0A.t06-thin90.a2m.gz # 1jl0A.t06-thin90.a2m with 105 sequences, total weight= 22.5805 avg weight= 0.215052 41 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jl0A/info/1jl0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jl0A/nostruct-align/1jl0A.t06-thin90.a2m.gz, have 101544 columns in 427 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a92A/nostruct-align/1a92A.t06-thin90.a2m.gz # 1a92A.t06-thin90.a2m with 26 sequences, total weight= 3.25279 avg weight= 0.125107 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a92A/info/1a92A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1a/1a92A/nostruct-align/1a92A.t06-thin90.a2m.gz, have 101594 columns in 428 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kqfC/nostruct-align/1kqfC.t06-thin90.a2m.gz # 1kqfC.t06-thin90.a2m with 637 sequences, total weight= 637 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05472 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kqfC/info/1kqfC.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kqfC/nostruct-align/1kqfC.t06-thin90.a2m.gz, have 101810 columns in 429 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t6eX/nostruct-align/1t6eX.t06-thin90.a2m.gz # 1t6eX.t06-thin90.a2m with 1110 sequences, total weight= 1110 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11532 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t6eX/info/1t6eX.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1t6eX/nostruct-align/1t6eX.t06-thin90.a2m.gz, have 102172 columns in 430 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uuqA/nostruct-align/1uuqA.t06-thin90.a2m.gz # 1uuqA.t06-thin90.a2m with 3172 sequences, total weight= 3172 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.833983 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uuqA/info/1uuqA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1uuqA/nostruct-align/1uuqA.t06-thin90.a2m.gz, have 102582 columns in 431 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xkzA/nostruct-align/1xkzA.t06-thin90.a2m.gz # 1xkzA.t06-thin90.a2m with 2202 sequences, total weight= 2202 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08059 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xkzA/info/1xkzA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xkzA/nostruct-align/1xkzA.t06-thin90.a2m.gz, have 102826 columns in 432 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dbxA/nostruct-align/1dbxA.t06-thin90.a2m.gz # 1dbxA.t06-thin90.a2m with 609 sequences, total weight= 609 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22633 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dbxA/info/1dbxA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1dbxA/nostruct-align/1dbxA.t06-thin90.a2m.gz, have 102978 columns in 433 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hq1A/nostruct-align/1hq1A.t06-thin90.a2m.gz # 1hq1A.t06-thin90.a2m with 325 sequences, total weight= 13.3139 avg weight= 0.0409658 41 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hq1A/info/1hq1A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1hq1A/nostruct-align/1hq1A.t06-thin90.a2m.gz, have 103054 columns in 434 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j31A/nostruct-align/1j31A.t06-thin90.a2m.gz # 1j31A.t06-thin90.a2m with 1676 sequences, total weight= 1676 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1154 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j31A/info/1j31A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1j31A/nostruct-align/1j31A.t06-thin90.a2m.gz, have 103316 columns in 435 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r6dA/nostruct-align/1r6dA.t06-thin90.a2m.gz # 1r6dA.t06-thin90.a2m with 12035 sequences, total weight= 12035 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.931053 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r6dA/info/1r6dA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1r6dA/nostruct-align/1r6dA.t06-thin90.a2m.gz, have 103638 columns in 436 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r29A/nostruct-align/1r29A.t06-thin90.a2m.gz # 1r29A.t06-thin90.a2m with 1500 sequences, total weight= 1500 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14543 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r29A/info/1r29A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1r29A/nostruct-align/1r29A.t06-thin90.a2m.gz, have 103760 columns in 437 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xg4A/nostruct-align/1xg4A.t06-thin90.a2m.gz # 1xg4A.t06-thin90.a2m with 788 sequences, total weight= 510.26 avg weight= 0.647538 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30804 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xg4A/info/1xg4A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xg4A/nostruct-align/1xg4A.t06-thin90.a2m.gz, have 104047 columns in 438 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x9iA/nostruct-align/1x9iA.t06-thin90.a2m.gz # 1x9iA.t06-thin90.a2m with 1959 sequences, total weight= 1959 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09034 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x9iA/info/1x9iA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1x9iA/nostruct-align/1x9iA.t06-thin90.a2m.gz, have 104347 columns in 439 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xy7A/nostruct-align/1xy7A.t06-thin90.a2m.gz # 1xy7A.t06-thin90.a2m with 3308 sequences, total weight= 3308 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.948264 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xy7A/info/1xy7A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xy7A/nostruct-align/1xy7A.t06-thin90.a2m.gz, have 104467 columns in 440 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gs9A/nostruct-align/1gs9A.t06-thin90.a2m.gz # 1gs9A.t06-thin90.a2m with 75 sequences, total weight= 30.2794 avg weight= 0.403726 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gs9A/info/1gs9A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gs9A/nostruct-align/1gs9A.t06-thin90.a2m.gz, have 104611 columns in 441 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s5uA/nostruct-align/1s5uA.t06-thin90.a2m.gz # 1s5uA.t06-thin90.a2m with 1372 sequences, total weight= 1372 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.980299 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s5uA/info/1s5uA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1s5uA/nostruct-align/1s5uA.t06-thin90.a2m.gz, have 104740 columns in 442 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s3cA/nostruct-align/1s3cA.t06-thin90.a2m.gz # 1s3cA.t06-thin90.a2m with 538 sequences, total weight= 367.715 avg weight= 0.683485 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30493 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s3cA/info/1s3cA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1s3cA/nostruct-align/1s3cA.t06-thin90.a2m.gz, have 104878 columns in 443 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pjxA/nostruct-align/1pjxA.t06-thin90.a2m.gz # 1pjxA.t06-thin90.a2m with 5527 sequences, total weight= 5527 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.696883 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pjxA/info/1pjxA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1pjxA/nostruct-align/1pjxA.t06-thin90.a2m.gz, have 105192 columns in 444 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hyp/nostruct-align/1hyp.t06-thin90.a2m.gz # 1hyp.t06-thin90.a2m with 90 sequences, total weight= 6.15574 avg weight= 0.0683971 31 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hyp/info/1hyp.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1hyp/nostruct-align/1hyp.t06-thin90.a2m.gz, have 105267 columns in 445 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jndA/nostruct-align/1jndA.t06-thin90.a2m.gz # 1jndA.t06-thin90.a2m with 1110 sequences, total weight= 1110 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09498 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jndA/info/1jndA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jndA/nostruct-align/1jndA.t06-thin90.a2m.gz, have 105667 columns in 446 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mj4A/nostruct-align/1mj4A.t06-thin90.a2m.gz # 1mj4A.t06-thin90.a2m with 555 sequences, total weight= 63.8261 avg weight= 0.115002 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30409 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mj4A/info/1mj4A.stride-mixed.n_notor WARNING: skipping m, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1m/1mj4A/nostruct-align/1mj4A.t06-thin90.a2m.gz, have 105746 columns in 447 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vmeA/nostruct-align/1vmeA.t06-thin90.a2m.gz # 1vmeA.t06-thin90.a2m with 4640 sequences, total weight= 4640 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.899767 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vmeA/info/1vmeA.stride-mixed.n_notor WARNING: skipping g, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1v/1vmeA/nostruct-align/1vmeA.t06-thin90.a2m.gz, have 106147 columns in 448 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vpjA/nostruct-align/1vpjA.t06-thin90.a2m.gz # 1vpjA.t06-thin90.a2m with 178 sequences, total weight= 10.3882 avg weight= 0.0583607 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vpjA/info/1vpjA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vpjA/nostruct-align/1vpjA.t06-thin90.a2m.gz, have 106325 columns in 449 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bikB/nostruct-align/2bikB.t06-thin90.a2m.gz # 2bikB.t06-thin90.a2m with 13090 sequences, total weight= 13090 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12384 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bikB/info/2bikB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2b/2bikB/nostruct-align/2bikB.t06-thin90.a2m.gz, have 106598 columns in 450 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mnnA/nostruct-align/1mnnA.t06-thin90.a2m.gz # 1mnnA.t06-thin90.a2m with 61 sequences, total weight= 53.8977 avg weight= 0.883568 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mnnA/info/1mnnA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mnnA/nostruct-align/1mnnA.t06-thin90.a2m.gz, have 106888 columns in 451 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j5xA/nostruct-align/1j5xA.t06-thin90.a2m.gz # 1j5xA.t06-thin90.a2m with 1308 sequences, total weight= 1308 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16161 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j5xA/info/1j5xA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1j5xA/nostruct-align/1j5xA.t06-thin90.a2m.gz, have 107207 columns in 452 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bx7/nostruct-align/1bx7.t06-thin90.a2m.gz # 1bx7.t06-thin90.a2m with 5 sequences, total weight= 2.54723 avg weight= 0.509447 14 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bx7/info/1bx7.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1b/1bx7/nostruct-align/1bx7.t06-thin90.a2m.gz, have 107258 columns in 453 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mdoA/nostruct-align/1mdoA.t06-thin90.a2m.gz # 1mdoA.t06-thin90.a2m with 11907 sequences, total weight= 11907 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.854055 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mdoA/info/1mdoA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mdoA/nostruct-align/1mdoA.t06-thin90.a2m.gz, have 107623 columns in 454 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r9lA/nostruct-align/1r9lA.t06-thin90.a2m.gz # 1r9lA.t06-thin90.a2m with 1313 sequences, total weight= 1313 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.925481 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r9lA/info/1r9lA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1r9lA/nostruct-align/1r9lA.t06-thin90.a2m.gz, have 107932 columns in 455 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pp0A/nostruct-align/1pp0A.t06-thin90.a2m.gz # 1pp0A.t06-thin90.a2m with 14 sequences, total weight= 7.04711 avg weight= 0.503365 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pp0A/info/1pp0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1pp0A/nostruct-align/1pp0A.t06-thin90.a2m.gz, have 108123 columns in 456 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r8sA/nostruct-align/1r8sA.t06-thin90.a2m.gz # 1r8sA.t06-thin90.a2m with 7438 sequences, total weight= 7438 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06848 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r8sA/info/1r8sA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1r8sA/nostruct-align/1r8sA.t06-thin90.a2m.gz, have 108283 columns in 457 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xvqA/nostruct-align/1xvqA.t06-thin90.a2m.gz # 1xvqA.t06-thin90.a2m with 3433 sequences, total weight= 3433 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00997 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xvqA/info/1xvqA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xvqA/nostruct-align/1xvqA.t06-thin90.a2m.gz, have 108443 columns in 458 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kgsA/nostruct-align/1kgsA.t06-thin90.a2m.gz # 1kgsA.t06-thin90.a2m with 11854 sequences, total weight= 11854 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15599 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kgsA/info/1kgsA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kgsA/nostruct-align/1kgsA.t06-thin90.a2m.gz, have 108662 columns in 459 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xyiA/nostruct-align/1xyiA.t06-thin90.a2m.gz # 1xyiA.t06-thin90.a2m with 6 sequences, total weight= 2.34343 avg weight= 0.390572 7 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xyiA/info/1xyiA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xyiA/nostruct-align/1xyiA.t06-thin90.a2m.gz, have 108728 columns in 460 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ox0A/nostruct-align/1ox0A.t06-thin90.a2m.gz # 1ox0A.t06-thin90.a2m with 3770 sequences, total weight= 2103.67 avg weight= 0.558002 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31705 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ox0A/info/1ox0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1ox0A/nostruct-align/1ox0A.t06-thin90.a2m.gz, have 109142 columns in 461 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o7nB/nostruct-align/1o7nB.t06-thin90.a2m.gz # 1o7nB.t06-thin90.a2m with 260 sequences, total weight= 260 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16114 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o7nB/info/1o7nB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1o7nB/nostruct-align/1o7nB.t06-thin90.a2m.gz, have 109335 columns in 462 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2t/2tpsA/nostruct-align/2tpsA.t06-thin90.a2m.gz # 2tpsA.t06-thin90.a2m with 3783 sequences, total weight= 3783 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.903715 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2t/2tpsA/info/2tpsA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2t/2tpsA/nostruct-align/2tpsA.t06-thin90.a2m.gz, have 109561 columns in 463 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oqjA/nostruct-align/1oqjA.t06-thin90.a2m.gz # 1oqjA.t06-thin90.a2m with 77 sequences, total weight= 20.7294 avg weight= 0.269213 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oqjA/info/1oqjA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1oqjA/nostruct-align/1oqjA.t06-thin90.a2m.gz, have 109651 columns in 464 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rwrA/nostruct-align/1rwrA.t06-thin90.a2m.gz # 1rwrA.t06-thin90.a2m with 117 sequences, total weight= 22.1637 avg weight= 0.189433 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rwrA/info/1rwrA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rwrA/nostruct-align/1rwrA.t06-thin90.a2m.gz, have 109948 columns in 465 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dbwA/nostruct-align/1dbwA.t06-thin90.a2m.gz # 1dbwA.t06-thin90.a2m with 13603 sequences, total weight= 13603 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22947 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dbwA/info/1dbwA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1dbwA/nostruct-align/1dbwA.t06-thin90.a2m.gz, have 110071 columns in 466 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jkxA/nostruct-align/1jkxA.t06-thin90.a2m.gz # 1jkxA.t06-thin90.a2m with 1180 sequences, total weight= 1180 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29752 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jkxA/info/1jkxA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jkxA/nostruct-align/1jkxA.t06-thin90.a2m.gz, have 110280 columns in 467 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b5pA/nostruct-align/1b5pA.t06-thin90.a2m.gz # 1b5pA.t06-thin90.a2m with 8158 sequences, total weight= 8158 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.911229 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b5pA/info/1b5pA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1b/1b5pA/nostruct-align/1b5pA.t06-thin90.a2m.gz, have 110662 columns in 468 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qkrA/nostruct-align/1qkrA.t06-thin90.a2m.gz # 1qkrA.t06-thin90.a2m with 48 sequences, total weight= 18.7069 avg weight= 0.389727 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qkrA/info/1qkrA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qkrA/nostruct-align/1qkrA.t06-thin90.a2m.gz, have 110843 columns in 469 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m45A/nostruct-align/1m45A.t06-thin90.a2m.gz # 1m45A.t06-thin90.a2m with 2298 sequences, total weight= 2298 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07618 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m45A/info/1m45A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1m45A/nostruct-align/1m45A.t06-thin90.a2m.gz, have 110985 columns in 470 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ui0A/nostruct-align/1ui0A.t06-thin90.a2m.gz # 1ui0A.t06-thin90.a2m with 483 sequences, total weight= 483 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26093 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ui0A/info/1ui0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1ui0A/nostruct-align/1ui0A.t06-thin90.a2m.gz, have 111177 columns in 471 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oxxK/nostruct-align/1oxxK.t06-thin90.a2m.gz # 1oxxK.t06-thin90.a2m with 18322 sequences, total weight= 18322 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10959 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oxxK/info/1oxxK.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1oxxK/nostruct-align/1oxxK.t06-thin90.a2m.gz, have 111529 columns in 472 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a6m/nostruct-align/1a6m.t06-thin90.a2m.gz # 1a6m.t06-thin90.a2m with 897 sequences, total weight= 897 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28543 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a6m/info/1a6m.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1a/1a6m/nostruct-align/1a6m.t06-thin90.a2m.gz, have 111680 columns in 473 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cnv/nostruct-align/1cnv.t06-thin90.a2m.gz # 1cnv.t06-thin90.a2m with 1207 sequences, total weight= 1207 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05608 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cnv/info/1cnv.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1c/1cnv/nostruct-align/1cnv.t06-thin90.a2m.gz, have 111963 columns in 474 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lycA/nostruct-align/1lycA.t06-thin90.a2m.gz # 1lycA.t06-thin90.a2m with 1064 sequences, total weight= 123.458 avg weight= 0.116032 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30371 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lycA/info/1lycA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1lycA/nostruct-align/1lycA.t06-thin90.a2m.gz, have 112299 columns in 475 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ewfA/nostruct-align/1ewfA.t06-thin90.a2m.gz # 1ewfA.t06-thin90.a2m with 161 sequences, total weight= 161 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05674 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ewfA/info/1ewfA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1ewfA/nostruct-align/1ewfA.t06-thin90.a2m.gz, have 112755 columns in 476 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dypA/nostruct-align/1dypA.t06-thin90.a2m.gz # 1dypA.t06-thin90.a2m with 642 sequences, total weight= 642 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07952 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dypA/info/1dypA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1dypA/nostruct-align/1dypA.t06-thin90.a2m.gz, have 113026 columns in 477 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r6wA/nostruct-align/1r6wA.t06-thin90.a2m.gz # 1r6wA.t06-thin90.a2m with 1387 sequences, total weight= 1387 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16663 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r6wA/info/1r6wA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1r6wA/nostruct-align/1r6wA.t06-thin90.a2m.gz, have 113347 columns in 478 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u9cA/nostruct-align/1u9cA.t06-thin90.a2m.gz # 1u9cA.t06-thin90.a2m with 1211 sequences, total weight= 1211 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14954 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u9cA/info/1u9cA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1u9cA/nostruct-align/1u9cA.t06-thin90.a2m.gz, have 113568 columns in 479 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y0kA/nostruct-align/1y0kA.t06-thin90.a2m.gz # 1y0kA.t06-thin90.a2m with 4 sequences, total weight= 2.08018 avg weight= 0.520046 8 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y0kA/info/1y0kA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1y0kA/nostruct-align/1y0kA.t06-thin90.a2m.gz, have 113748 columns in 480 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kptA/nostruct-align/1kptA.t06-thin90.a2m.gz # 1kptA.t06-thin90.a2m with 9 sequences, total weight= 4.40111 avg weight= 0.489012 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kptA/info/1kptA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kptA/nostruct-align/1kptA.t06-thin90.a2m.gz, have 113853 columns in 481 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nvmB/nostruct-align/1nvmB.t06-thin90.a2m.gz # 1nvmB.t06-thin90.a2m with 1510 sequences, total weight= 1510 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15817 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nvmB/info/1nvmB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nvmB/nostruct-align/1nvmB.t06-thin90.a2m.gz, have 114165 columns in 482 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t5bA/nostruct-align/1t5bA.t06-thin90.a2m.gz # 1t5bA.t06-thin90.a2m with 1705 sequences, total weight= 1705 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.961135 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t5bA/info/1t5bA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1t5bA/nostruct-align/1t5bA.t06-thin90.a2m.gz, have 114364 columns in 483 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tw6A/nostruct-align/1tw6A.t06-thin90.a2m.gz # 1tw6A.t06-thin90.a2m with 318 sequences, total weight= 115.866 avg weight= 0.364359 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30446 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tw6A/info/1tw6A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1tw6A/nostruct-align/1tw6A.t06-thin90.a2m.gz, have 114454 columns in 484 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u55A/nostruct-align/1u55A.t06-thin90.a2m.gz # 1u55A.t06-thin90.a2m with 119 sequences, total weight= 119 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23005 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u55A/info/1u55A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1u55A/nostruct-align/1u55A.t06-thin90.a2m.gz, have 114642 columns in 485 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gheA/nostruct-align/1gheA.t06-thin90.a2m.gz # 1gheA.t06-thin90.a2m with 8056 sequences, total weight= 8056 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.743003 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gheA/info/1gheA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gheA/nostruct-align/1gheA.t06-thin90.a2m.gz, have 114812 columns in 486 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1smxA/nostruct-align/1smxA.t06-thin90.a2m.gz # 1smxA.t06-thin90.a2m with 235 sequences, total weight= 10.1375 avg weight= 0.0431382 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1smxA/info/1smxA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1smxA/nostruct-align/1smxA.t06-thin90.a2m.gz, have 114899 columns in 487 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pqhA/nostruct-align/1pqhA.t06-thin90.a2m.gz # 1pqhA.t06-thin90.a2m with 154 sequences, total weight= 8.58212 avg weight= 0.0557281 31 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pqhA/info/1pqhA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1pqhA/nostruct-align/1pqhA.t06-thin90.a2m.gz, have 115018 columns in 488 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jfuA/nostruct-align/1jfuA.t06-thin90.a2m.gz # 1jfuA.t06-thin90.a2m with 5585 sequences, total weight= 5585 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.887961 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jfuA/info/1jfuA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jfuA/nostruct-align/1jfuA.t06-thin90.a2m.gz, have 115194 columns in 489 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w9aA/nostruct-align/1w9aA.t06-thin90.a2m.gz # 1w9aA.t06-thin90.a2m with 1037 sequences, total weight= 1037 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.893847 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w9aA/info/1w9aA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1w9aA/nostruct-align/1w9aA.t06-thin90.a2m.gz, have 115336 columns in 490 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l6rA/nostruct-align/1l6rA.t06-thin90.a2m.gz # 1l6rA.t06-thin90.a2m with 5499 sequences, total weight= 5499 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.899312 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l6rA/info/1l6rA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1l6rA/nostruct-align/1l6rA.t06-thin90.a2m.gz, have 115561 columns in 491 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r6xA/nostruct-align/1r6xA.t06-thin90.a2m.gz # 1r6xA.t06-thin90.a2m with 180 sequences, total weight= 27.1734 avg weight= 0.150963 43 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r6xA/info/1r6xA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1r6xA/nostruct-align/1r6xA.t06-thin90.a2m.gz, have 115947 columns in 492 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qtnA/nostruct-align/1qtnA.t06-thin90.a2m.gz # 1qtnA.t06-thin90.a2m with 235 sequences, total weight= 61.6831 avg weight= 0.262481 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30099 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qtnA/info/1qtnA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qtnA/nostruct-align/1qtnA.t06-thin90.a2m.gz, have 116099 columns in 493 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wu9A/nostruct-align/1wu9A.t06-thin90.a2m.gz # 1wu9A.t06-thin90.a2m with 54 sequences, total weight= 7.55136 avg weight= 0.13984 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wu9A/info/1wu9A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1wu9A/nostruct-align/1wu9A.t06-thin90.a2m.gz, have 116158 columns in 494 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fs1B/nostruct-align/1fs1B.t06-thin90.a2m.gz # 1fs1B.t06-thin90.a2m with 203 sequences, total weight= 53.2836 avg weight= 0.262481 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fs1B/info/1fs1B.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1fs1B/nostruct-align/1fs1B.t06-thin90.a2m.gz, have 116274 columns in 495 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jl1A/nostruct-align/1jl1A.t06-thin90.a2m.gz # 1jl1A.t06-thin90.a2m with 1205 sequences, total weight= 1205 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15233 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jl1A/info/1jl1A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jl1A/nostruct-align/1jl1A.t06-thin90.a2m.gz, have 116426 columns in 496 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hm9A/nostruct-align/1hm9A.t06-thin90.a2m.gz # 1hm9A.t06-thin90.a2m with 4672 sequences, total weight= 4672 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05557 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hm9A/info/1hm9A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1hm9A/nostruct-align/1hm9A.t06-thin90.a2m.gz, have 116884 columns in 497 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oboA/nostruct-align/1oboA.t06-thin90.a2m.gz # 1oboA.t06-thin90.a2m with 1394 sequences, total weight= 1394 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01635 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oboA/info/1oboA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1oboA/nostruct-align/1oboA.t06-thin90.a2m.gz, have 117053 columns in 498 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qwnA/nostruct-align/1qwnA.t06-thin90.a2m.gz # 1qwnA.t06-thin90.a2m with 300 sequences, total weight= 300 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09056 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qwnA/info/1qwnA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qwnA/nostruct-align/1qwnA.t06-thin90.a2m.gz, have 118067 columns in 499 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gqnA/nostruct-align/1gqnA.t06-thin90.a2m.gz # 1gqnA.t06-thin90.a2m with 149 sequences, total weight= 149 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2678 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gqnA/info/1gqnA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gqnA/nostruct-align/1gqnA.t06-thin90.a2m.gz, have 118319 columns in 500 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iuqA/nostruct-align/1iuqA.t06-thin90.a2m.gz # 1iuqA.t06-thin90.a2m with 1553 sequences, total weight= 1553 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.902583 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iuqA/info/1iuqA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1iuqA/nostruct-align/1iuqA.t06-thin90.a2m.gz, have 118676 columns in 501 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v6pA/nostruct-align/1v6pA.t06-thin90.a2m.gz # 1v6pA.t06-thin90.a2m with 170 sequences, total weight= 18.7809 avg weight= 0.110476 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v6pA/info/1v6pA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1v6pA/nostruct-align/1v6pA.t06-thin90.a2m.gz, have 118738 columns in 502 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1azo/nostruct-align/1azo.t06-thin90.a2m.gz # 1azo.t06-thin90.a2m with 62 sequences, total weight= 40.5812 avg weight= 0.654535 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1azo/info/1azo.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1a/1azo/nostruct-align/1azo.t06-thin90.a2m.gz, have 118952 columns in 503 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cy5A/nostruct-align/1cy5A.t06-thin90.a2m.gz # 1cy5A.t06-thin90.a2m with 10 sequences, total weight= 3.45596 avg weight= 0.345596 12 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cy5A/info/1cy5A.stride-mixed.n_notor WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1c/1cy5A/nostruct-align/1cy5A.t06-thin90.a2m.gz, have 119044 columns in 504 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v2zA/nostruct-align/1v2zA.t06-thin90.a2m.gz # 1v2zA.t06-thin90.a2m with 20 sequences, total weight= 3.81023 avg weight= 0.190512 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v2zA/info/1v2zA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1v2zA/nostruct-align/1v2zA.t06-thin90.a2m.gz, have 119150 columns in 505 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m4lA/nostruct-align/1m4lA.t06-thin90.a2m.gz # 1m4lA.t06-thin90.a2m with 926 sequences, total weight= 926 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04003 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m4lA/info/1m4lA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1m4lA/nostruct-align/1m4lA.t06-thin90.a2m.gz, have 119457 columns in 506 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gu7A/nostruct-align/1gu7A.t06-thin90.a2m.gz # 1gu7A.t06-thin90.a2m with 4959 sequences, total weight= 4959 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09179 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gu7A/info/1gu7A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gu7A/nostruct-align/1gu7A.t06-thin90.a2m.gz, have 119821 columns in 507 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ogoX/nostruct-align/1ogoX.t06-thin90.a2m.gz # 1ogoX.t06-thin90.a2m with 77 sequences, total weight= 53.0206 avg weight= 0.688579 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ogoX/info/1ogoX.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1ogoX/nostruct-align/1ogoX.t06-thin90.a2m.gz, have 120393 columns in 508 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ryaA/nostruct-align/1ryaA.t06-thin90.a2m.gz # 1ryaA.t06-thin90.a2m with 3617 sequences, total weight= 3617 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.829684 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ryaA/info/1ryaA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1ryaA/nostruct-align/1ryaA.t06-thin90.a2m.gz, have 120553 columns in 509 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q0rA/nostruct-align/1q0rA.t06-thin90.a2m.gz # 1q0rA.t06-thin90.a2m with 10032 sequences, total weight= 10032 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.654213 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q0rA/info/1q0rA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1q0rA/nostruct-align/1q0rA.t06-thin90.a2m.gz, have 120850 columns in 510 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fr2A/nostruct-align/1fr2A.t06-thin90.a2m.gz # 1fr2A.t06-thin90.a2m with 32 sequences, total weight= 6.12043 avg weight= 0.191263 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fr2A/info/1fr2A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1fr2A/nostruct-align/1fr2A.t06-thin90.a2m.gz, have 120933 columns in 511 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e29A/nostruct-align/1e29A.t06-thin90.a2m.gz # 1e29A.t06-thin90.a2m with 833 sequences, total weight= 833 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0376 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e29A/info/1e29A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1e29A/nostruct-align/1e29A.t06-thin90.a2m.gz, have 121068 columns in 512 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gveA/nostruct-align/1gveA.t06-thin90.a2m.gz # 1gveA.t06-thin90.a2m with 2577 sequences, total weight= 2577 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23051 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gveA/info/1gveA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gveA/nostruct-align/1gveA.t06-thin90.a2m.gz, have 121392 columns in 513 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k3iA/nostruct-align/1k3iA.t06-thin90.a2m.gz # 1k3iA.t06-thin90.a2m with 2439 sequences, total weight= 2439 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22979 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k3iA/info/1k3iA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1k3iA/nostruct-align/1k3iA.t06-thin90.a2m.gz, have 122043 columns in 514 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g2nA/nostruct-align/1g2nA.t06-thin90.a2m.gz # 1g2nA.t06-thin90.a2m with 1209 sequences, total weight= 1209 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.896372 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g2nA/info/1g2nA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1g2nA/nostruct-align/1g2nA.t06-thin90.a2m.gz, have 122289 columns in 515 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uuyA/nostruct-align/1uuyA.t06-thin90.a2m.gz # 1uuyA.t06-thin90.a2m with 1042 sequences, total weight= 884.069 avg weight= 0.848434 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30374 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uuyA/info/1uuyA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1uuyA/nostruct-align/1uuyA.t06-thin90.a2m.gz, have 122450 columns in 516 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jo8A/nostruct-align/1jo8A.t06-thin90.a2m.gz # 1jo8A.t06-thin90.a2m with 1552 sequences, total weight= 114.546 avg weight= 0.0738056 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32408 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jo8A/info/1jo8A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jo8A/nostruct-align/1jo8A.t06-thin90.a2m.gz, have 122508 columns in 517 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pz7A/nostruct-align/1pz7A.t06-thin90.a2m.gz # 1pz7A.t06-thin90.a2m with 1405 sequences, total weight= 1405 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.860278 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pz7A/info/1pz7A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1pz7A/nostruct-align/1pz7A.t06-thin90.a2m.gz, have 122696 columns in 518 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n8kA/nostruct-align/1n8kA.t06-thin90.a2m.gz # 1n8kA.t06-thin90.a2m with 4865 sequences, total weight= 4865 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16019 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n8kA/info/1n8kA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1n8kA/nostruct-align/1n8kA.t06-thin90.a2m.gz, have 123070 columns in 519 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jx4A/nostruct-align/1jx4A.t06-thin90.a2m.gz # 1jx4A.t06-thin90.a2m with 827 sequences, total weight= 827 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.266 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jx4A/info/1jx4A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jx4A/nostruct-align/1jx4A.t06-thin90.a2m.gz, have 123411 columns in 520 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e87A/nostruct-align/1e87A.t06-thin90.a2m.gz # 1e87A.t06-thin90.a2m with 2253 sequences, total weight= 2253 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06526 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e87A/info/1e87A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1e87A/nostruct-align/1e87A.t06-thin90.a2m.gz, have 123528 columns in 521 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kjqA/nostruct-align/1kjqA.t06-thin90.a2m.gz # 1kjqA.t06-thin90.a2m with 3833 sequences, total weight= 3833 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0531 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kjqA/info/1kjqA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kjqA/nostruct-align/1kjqA.t06-thin90.a2m.gz, have 123916 columns in 522 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jsdA/nostruct-align/1jsdA.t06-thin90.a2m.gz # 1jsdA.t06-thin90.a2m with 174 sequences, total weight= 10.5377 avg weight= 0.0605612 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jsdA/info/1jsdA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jsdA/nostruct-align/1jsdA.t06-thin90.a2m.gz, have 124233 columns in 523 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1it2A/nostruct-align/1it2A.t06-thin90.a2m.gz # 1it2A.t06-thin90.a2m with 836 sequences, total weight= 836 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28269 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1it2A/info/1it2A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1it2A/nostruct-align/1it2A.t06-thin90.a2m.gz, have 124379 columns in 524 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qb7A/nostruct-align/1qb7A.t06-thin90.a2m.gz # 1qb7A.t06-thin90.a2m with 2936 sequences, total weight= 2936 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.93133 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qb7A/info/1qb7A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qb7A/nostruct-align/1qb7A.t06-thin90.a2m.gz, have 124615 columns in 525 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vbwA/nostruct-align/1vbwA.t06-thin90.a2m.gz # 1vbwA.t06-thin90.a2m with 83 sequences, total weight= 15.5609 avg weight= 0.187481 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vbwA/info/1vbwA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vbwA/nostruct-align/1vbwA.t06-thin90.a2m.gz, have 124683 columns in 526 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ubkS/nostruct-align/1ubkS.t06-thin90.a2m.gz # 1ubkS.t06-thin90.a2m with 477 sequences, total weight= 109.876 avg weight= 0.230348 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30189 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ubkS/info/1ubkS.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1ubkS/nostruct-align/1ubkS.t06-thin90.a2m.gz, have 124950 columns in 527 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jykA/nostruct-align/1jykA.t06-thin90.a2m.gz # 1jykA.t06-thin90.a2m with 3566 sequences, total weight= 3566 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04773 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jykA/info/1jykA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jykA/nostruct-align/1jykA.t06-thin90.a2m.gz, have 125179 columns in 528 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uv4A/nostruct-align/1uv4A.t06-thin90.a2m.gz # 1uv4A.t06-thin90.a2m with 984 sequences, total weight= 984 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.973268 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uv4A/info/1uv4A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1uv4A/nostruct-align/1uv4A.t06-thin90.a2m.gz, have 125470 columns in 529 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o4yA/nostruct-align/1o4yA.t06-thin90.a2m.gz # 1o4yA.t06-thin90.a2m with 651 sequences, total weight= 651 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07921 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o4yA/info/1o4yA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1o4yA/nostruct-align/1o4yA.t06-thin90.a2m.gz, have 125740 columns in 530 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pkoA/nostruct-align/1pkoA.t06-thin90.a2m.gz # 1pkoA.t06-thin90.a2m with 10124 sequences, total weight= 10124 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1687 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pkoA/info/1pkoA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1pkoA/nostruct-align/1pkoA.t06-thin90.a2m.gz, have 125864 columns in 531 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1urrA/nostruct-align/1urrA.t06-thin90.a2m.gz # 1urrA.t06-thin90.a2m with 417 sequences, total weight= 70.3487 avg weight= 0.168702 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30508 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1urrA/info/1urrA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1urrA/nostruct-align/1urrA.t06-thin90.a2m.gz, have 125961 columns in 532 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x7yB/nostruct-align/1x7yB.t06-thin90.a2m.gz # 1x7yB.t06-thin90.a2m with 1902 sequences, total weight= 1902 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27096 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x7yB/info/1x7yB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1x7yB/nostruct-align/1x7yB.t06-thin90.a2m.gz, have 126290 columns in 533 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kveA/nostruct-align/1kveA.t06-thin90.a2m.gz # 1kveA.t06-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.697962 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kveA/info/1kveA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kveA/nostruct-align/1kveA.t06-thin90.a2m.gz, have 126353 columns in 534 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kp6A/nostruct-align/1kp6A.t06-thin90.a2m.gz # 1kp6A.t06-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.617161 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kp6A/info/1kp6A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kp6A/nostruct-align/1kp6A.t06-thin90.a2m.gz, have 126432 columns in 535 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e5kA/nostruct-align/1e5kA.t06-thin90.a2m.gz # 1e5kA.t06-thin90.a2m with 3737 sequences, total weight= 3737 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04502 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e5kA/info/1e5kA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1e5kA/nostruct-align/1e5kA.t06-thin90.a2m.gz, have 126620 columns in 536 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eajA/nostruct-align/1eajA.t06-thin90.a2m.gz # 1eajA.t06-thin90.a2m with 11309 sequences, total weight= 41.9922 avg weight= 0.00371316 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3006 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eajA/info/1eajA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1eajA/nostruct-align/1eajA.t06-thin90.a2m.gz, have 126744 columns in 537 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lzlA/nostruct-align/1lzlA.t06-thin90.a2m.gz # 1lzlA.t06-thin90.a2m with 8159 sequences, total weight= 8159 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.779348 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lzlA/info/1lzlA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1lzlA/nostruct-align/1lzlA.t06-thin90.a2m.gz, have 127061 columns in 538 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jo0A/nostruct-align/1jo0A.t06-thin90.a2m.gz # 1jo0A.t06-thin90.a2m with 155 sequences, total weight= 23.3416 avg weight= 0.150591 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jo0A/info/1jo0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jo0A/nostruct-align/1jo0A.t06-thin90.a2m.gz, have 127158 columns in 539 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sqeA/nostruct-align/1sqeA.t06-thin90.a2m.gz # 1sqeA.t06-thin90.a2m with 318 sequences, total weight= 318 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0596 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sqeA/info/1sqeA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1sqeA/nostruct-align/1sqeA.t06-thin90.a2m.gz, have 127259 columns in 540 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pgs/nostruct-align/1pgs.t06-thin90.a2m.gz # 1pgs.t06-thin90.a2m with 7 sequences, total weight= 7 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17523 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pgs/info/1pgs.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1pgs/nostruct-align/1pgs.t06-thin90.a2m.gz, have 127570 columns in 541 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jb3A/nostruct-align/1jb3A.t06-thin90.a2m.gz # 1jb3A.t06-thin90.a2m with 6 sequences, total weight= 2.61003 avg weight= 0.435006 8 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jb3A/info/1jb3A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jb3A/nostruct-align/1jb3A.t06-thin90.a2m.gz, have 127697 columns in 542 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k07A/nostruct-align/1k07A.t06-thin90.a2m.gz # 1k07A.t06-thin90.a2m with 4641 sequences, total weight= 4641 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.783066 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k07A/info/1k07A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1k07A/nostruct-align/1k07A.t06-thin90.a2m.gz, have 127959 columns in 543 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vhqA/nostruct-align/1vhqA.t06-thin90.a2m.gz # 1vhqA.t06-thin90.a2m with 1050 sequences, total weight= 1050 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16711 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vhqA/info/1vhqA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vhqA/nostruct-align/1vhqA.t06-thin90.a2m.gz, have 128176 columns in 544 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xkpB/nostruct-align/1xkpB.t06-thin90.a2m.gz # 1xkpB.t06-thin90.a2m with 13 sequences, total weight= 8.66941 avg weight= 0.666877 20 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xkpB/info/1xkpB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xkpB/nostruct-align/1xkpB.t06-thin90.a2m.gz, have 128297 columns in 545 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nkpA/nostruct-align/1nkpA.t06-thin90.a2m.gz # 1nkpA.t06-thin90.a2m with 225 sequences, total weight= 68.4612 avg weight= 0.304272 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30219 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nkpA/info/1nkpA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nkpA/nostruct-align/1nkpA.t06-thin90.a2m.gz, have 128385 columns in 546 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1od3A/nostruct-align/1od3A.t06-thin90.a2m.gz # 1od3A.t06-thin90.a2m with 193 sequences, total weight= 121.386 avg weight= 0.628944 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30143 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1od3A/info/1od3A.stride-mixed.n_notor WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1o/1od3A/nostruct-align/1od3A.t06-thin90.a2m.gz, have 128516 columns in 547 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xjuA/nostruct-align/1xjuA.t06-thin90.a2m.gz # 1xjuA.t06-thin90.a2m with 199 sequences, total weight= 194.131 avg weight= 0.975533 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xjuA/info/1xjuA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xjuA/nostruct-align/1xjuA.t06-thin90.a2m.gz, have 128672 columns in 548 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2biqA/nostruct-align/2biqA.t06-thin90.a2m.gz # 2biqA.t06-thin90.a2m with 76 sequences, total weight= 12.902 avg weight= 0.169763 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2biqA/info/2biqA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2b/2biqA/nostruct-align/2biqA.t06-thin90.a2m.gz, have 128857 columns in 549 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vyiA/nostruct-align/1vyiA.t06-thin90.a2m.gz # 1vyiA.t06-thin90.a2m with 18 sequences, total weight= 2.74254 avg weight= 0.152363 12 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vyiA/info/1vyiA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vyiA/nostruct-align/1vyiA.t06-thin90.a2m.gz, have 128968 columns in 550 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iw0A/nostruct-align/1iw0A.t06-thin90.a2m.gz # 1iw0A.t06-thin90.a2m with 205 sequences, total weight= 205 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1613 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iw0A/info/1iw0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1iw0A/nostruct-align/1iw0A.t06-thin90.a2m.gz, have 129175 columns in 551 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e1hB/nostruct-align/1e1hB.t06-thin90.a2m.gz # 1e1hB.t06-thin90.a2m with 12 sequences, total weight= 6.10569 avg weight= 0.508808 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e1hB/info/1e1hB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1e1hB/nostruct-align/1e1hB.t06-thin90.a2m.gz, have 129339 columns in 552 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iibA/nostruct-align/1iibA.t06-thin90.a2m.gz # 1iibA.t06-thin90.a2m with 156 sequences, total weight= 35.2359 avg weight= 0.225871 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iibA/info/1iibA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1iibA/nostruct-align/1iibA.t06-thin90.a2m.gz, have 129442 columns in 553 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dcs/nostruct-align/1dcs.t06-thin90.a2m.gz # 1dcs.t06-thin90.a2m with 1001 sequences, total weight= 1001 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26225 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dcs/info/1dcs.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1dcs/nostruct-align/1dcs.t06-thin90.a2m.gz, have 129721 columns in 554 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tuaA/nostruct-align/1tuaA.t06-thin90.a2m.gz # 1tuaA.t06-thin90.a2m with 116 sequences, total weight= 32.438 avg weight= 0.279638 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tuaA/info/1tuaA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1tuaA/nostruct-align/1tuaA.t06-thin90.a2m.gz, have 129910 columns in 555 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eu1A/nostruct-align/1eu1A.t06-thin90.a2m.gz # 1eu1A.t06-thin90.a2m with 1619 sequences, total weight= 1619 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1303 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eu1A/info/1eu1A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1eu1A/nostruct-align/1eu1A.t06-thin90.a2m.gz, have 130677 columns in 556 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s1fA/nostruct-align/1s1fA.t06-thin90.a2m.gz # 1s1fA.t06-thin90.a2m with 5670 sequences, total weight= 5670 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01477 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s1fA/info/1s1fA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1s1fA/nostruct-align/1s1fA.t06-thin90.a2m.gz, have 131074 columns in 557 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sfdA/nostruct-align/1sfdA.t06-thin90.a2m.gz # 1sfdA.t06-thin90.a2m with 985 sequences, total weight= 985 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02045 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sfdA/info/1sfdA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1sfdA/nostruct-align/1sfdA.t06-thin90.a2m.gz, have 131179 columns in 558 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kr7A/nostruct-align/1kr7A.t06-thin90.a2m.gz # 1kr7A.t06-thin90.a2m with 5 sequences, total weight= 3.76694 avg weight= 0.753387 12 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kr7A/info/1kr7A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kr7A/nostruct-align/1kr7A.t06-thin90.a2m.gz, have 131289 columns in 559 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hx6A/nostruct-align/1hx6A.t06-thin90.a2m.gz # 1hx6A.t06-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.583138 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hx6A/info/1hx6A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1hx6A/nostruct-align/1hx6A.t06-thin90.a2m.gz, have 131659 columns in 560 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i12A/nostruct-align/1i12A.t06-thin90.a2m.gz # 1i12A.t06-thin90.a2m with 7909 sequences, total weight= 7909 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.747681 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i12A/info/1i12A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1i12A/nostruct-align/1i12A.t06-thin90.a2m.gz, have 131813 columns in 561 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1szhA/nostruct-align/1szhA.t06-thin90.a2m.gz # 1szhA.t06-thin90.a2m with 5 sequences, total weight= 3.58609 avg weight= 0.717219 12 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1szhA/info/1szhA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1szhA/nostruct-align/1szhA.t06-thin90.a2m.gz, have 131960 columns in 562 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lqaA/nostruct-align/1lqaA.t06-thin90.a2m.gz # 1lqaA.t06-thin90.a2m with 2640 sequences, total weight= 2640 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22665 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lqaA/info/1lqaA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1lqaA/nostruct-align/1lqaA.t06-thin90.a2m.gz, have 132306 columns in 563 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pcfA/nostruct-align/1pcfA.t06-thin90.a2m.gz # 1pcfA.t06-thin90.a2m with 48 sequences, total weight= 12.2138 avg weight= 0.254455 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pcfA/info/1pcfA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1pcfA/nostruct-align/1pcfA.t06-thin90.a2m.gz, have 132372 columns in 564 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d3vA/nostruct-align/1d3vA.t06-thin90.a2m.gz # 1d3vA.t06-thin90.a2m with 583 sequences, total weight= 583 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21411 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d3vA/info/1d3vA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1d3vA/nostruct-align/1d3vA.t06-thin90.a2m.gz, have 132680 columns in 565 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eyhA/nostruct-align/1eyhA.t06-thin90.a2m.gz # 1eyhA.t06-thin90.a2m with 121 sequences, total weight= 30.3979 avg weight= 0.251222 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eyhA/info/1eyhA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1eyhA/nostruct-align/1eyhA.t06-thin90.a2m.gz, have 132824 columns in 566 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1aqzA/nostruct-align/1aqzA.t06-thin90.a2m.gz # 1aqzA.t06-thin90.a2m with 6 sequences, total weight= 2.99208 avg weight= 0.498681 12 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1aqzA/info/1aqzA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1a/1aqzA/nostruct-align/1aqzA.t06-thin90.a2m.gz, have 132966 columns in 567 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k94A/nostruct-align/1k94A.t06-thin90.a2m.gz # 1k94A.t06-thin90.a2m with 2292 sequences, total weight= 2292 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00576 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k94A/info/1k94A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1k94A/nostruct-align/1k94A.t06-thin90.a2m.gz, have 133131 columns in 568 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k7jA/nostruct-align/1k7jA.t06-thin90.a2m.gz # 1k7jA.t06-thin90.a2m with 719 sequences, total weight= 183.735 avg weight= 0.255542 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3147 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k7jA/info/1k7jA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1k7jA/nostruct-align/1k7jA.t06-thin90.a2m.gz, have 133337 columns in 569 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gqzA/nostruct-align/1gqzA.t06-thin90.a2m.gz # 1gqzA.t06-thin90.a2m with 795 sequences, total weight= 795 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19055 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gqzA/info/1gqzA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gqzA/nostruct-align/1gqzA.t06-thin90.a2m.gz, have 133611 columns in 570 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jakA/nostruct-align/1jakA.t06-thin90.a2m.gz # 1jakA.t06-thin90.a2m with 378 sequences, total weight= 378 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08855 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jakA/info/1jakA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jakA/nostruct-align/1jakA.t06-thin90.a2m.gz, have 134110 columns in 571 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gxuA/nostruct-align/1gxuA.t06-thin90.a2m.gz # 1gxuA.t06-thin90.a2m with 415 sequences, total weight= 55.9869 avg weight= 0.134908 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30227 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gxuA/info/1gxuA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gxuA/nostruct-align/1gxuA.t06-thin90.a2m.gz, have 134198 columns in 572 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v7zA/nostruct-align/1v7zA.t06-thin90.a2m.gz # 1v7zA.t06-thin90.a2m with 156 sequences, total weight= 117.386 avg weight= 0.752472 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30072 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v7zA/info/1v7zA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1v7zA/nostruct-align/1v7zA.t06-thin90.a2m.gz, have 134455 columns in 573 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jixA/nostruct-align/1jixA.t06-thin90.a2m.gz # 1jixA.t06-thin90.a2m with 38 sequences, total weight= 38 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.975714 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jixA/info/1jixA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jixA/nostruct-align/1jixA.t06-thin90.a2m.gz, have 134806 columns in 574 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v37A/nostruct-align/1v37A.t06-thin90.a2m.gz # 1v37A.t06-thin90.a2m with 1780 sequences, total weight= 1780 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0421 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v37A/info/1v37A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1v37A/nostruct-align/1v37A.t06-thin90.a2m.gz, have 134977 columns in 575 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lbu/nostruct-align/1lbu.t06-thin90.a2m.gz # 1lbu.t06-thin90.a2m with 515 sequences, total weight= 515 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06811 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lbu/info/1lbu.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1lbu/nostruct-align/1lbu.t06-thin90.a2m.gz, have 135190 columns in 576 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qd1A/nostruct-align/1qd1A.t06-thin90.a2m.gz # 1qd1A.t06-thin90.a2m with 52 sequences, total weight= 13.4249 avg weight= 0.258172 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qd1A/info/1qd1A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qd1A/nostruct-align/1qd1A.t06-thin90.a2m.gz, have 135509 columns in 577 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ezwA/nostruct-align/1ezwA.t06-thin90.a2m.gz # 1ezwA.t06-thin90.a2m with 1356 sequences, total weight= 1356 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10487 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ezwA/info/1ezwA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1ezwA/nostruct-align/1ezwA.t06-thin90.a2m.gz, have 135856 columns in 578 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t6uA/nostruct-align/1t6uA.t06-thin90.a2m.gz # 1t6uA.t06-thin90.a2m with 23 sequences, total weight= 6.67042 avg weight= 0.290018 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t6uA/info/1t6uA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1t6uA/nostruct-align/1t6uA.t06-thin90.a2m.gz, have 135973 columns in 579 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ekqA/nostruct-align/1ekqA.t06-thin90.a2m.gz # 1ekqA.t06-thin90.a2m with 2204 sequences, total weight= 2204 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.968197 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ekqA/info/1ekqA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1ekqA/nostruct-align/1ekqA.t06-thin90.a2m.gz, have 136227 columns in 580 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kxoA/nostruct-align/1kxoA.t06-thin90.a2m.gz # 1kxoA.t06-thin90.a2m with 583 sequences, total weight= 583 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.958201 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kxoA/info/1kxoA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kxoA/nostruct-align/1kxoA.t06-thin90.a2m.gz, have 136392 columns in 581 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lriA/nostruct-align/1lriA.t06-thin90.a2m.gz # 1lriA.t06-thin90.a2m with 82 sequences, total weight= 19.0306 avg weight= 0.23208 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lriA/info/1lriA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1lriA/nostruct-align/1lriA.t06-thin90.a2m.gz, have 136490 columns in 582 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lvmA/nostruct-align/1lvmA.t06-thin90.a2m.gz # 1lvmA.t06-thin90.a2m with 511 sequences, total weight= 511 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11469 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lvmA/info/1lvmA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1lvmA/nostruct-align/1lvmA.t06-thin90.a2m.gz, have 136719 columns in 583 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1ta8A/nostruct-align/1ta8A.t06-thin90.a2m.gz # 1ta8A.t06-thin90.a2m with 407 sequences, total weight= 28.3247 avg weight= 0.0695939 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1ta8A/info/1ta8A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1ta8A/nostruct-align/1ta8A.t06-thin90.a2m.gz, have 137032 columns in 584 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gwyA/nostruct-align/1gwyA.t06-thin90.a2m.gz # 1gwyA.t06-thin90.a2m with 20 sequences, total weight= 9.54821 avg weight= 0.47741 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gwyA/info/1gwyA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gwyA/nostruct-align/1gwyA.t06-thin90.a2m.gz, have 137207 columns in 585 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dzkA/nostruct-align/1dzkA.t06-thin90.a2m.gz # 1dzkA.t06-thin90.a2m with 327 sequences, total weight= 327 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03801 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dzkA/info/1dzkA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1dzkA/nostruct-align/1dzkA.t06-thin90.a2m.gz, have 137355 columns in 586 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wkcA/nostruct-align/1wkcA.t06-thin90.a2m.gz # 1wkcA.t06-thin90.a2m with 431 sequences, total weight= 270.74 avg weight= 0.628166 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3061 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wkcA/info/1wkcA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1wkcA/nostruct-align/1wkcA.t06-thin90.a2m.gz, have 137523 columns in 587 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d5tA/nostruct-align/1d5tA.t06-thin90.a2m.gz # 1d5tA.t06-thin90.a2m with 6849 sequences, total weight= 6849 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.718206 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d5tA/info/1d5tA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1d5tA/nostruct-align/1d5tA.t06-thin90.a2m.gz, have 137956 columns in 588 chains # command:CPU_time= 971.429 sec, elapsed time= 990.577 sec) # command:# command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/predict-2nd/testing/training-data/ # command:# reading script from file dunbrack-30pc-1763-3.t06-thin90-n_notor # Prefix for input files set to # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/4u/4ubpA/nostruct-align/4ubpA.t06-thin90.a2m.gz # 4ubpA.t06-thin90.a2m with 139 sequences, total weight= 6.00596 avg weight= 0.0432083 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/4u/4ubpA/info/4ubpA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/4u/4ubpA/nostruct-align/4ubpA.t06-thin90.a2m.gz, have 100 columns in 1 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kngA/nostruct-align/1kngA.t06-thin90.a2m.gz # 1kngA.t06-thin90.a2m with 5206 sequences, total weight= 5206 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00321 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kngA/info/1kngA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kngA/nostruct-align/1kngA.t06-thin90.a2m.gz, have 244 columns in 2 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jnrA/nostruct-align/1jnrA.t06-thin90.a2m.gz # 1jnrA.t06-thin90.a2m with 9813 sequences, total weight= 9813 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.8953 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jnrA/info/1jnrA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jnrA/nostruct-align/1jnrA.t06-thin90.a2m.gz, have 886 columns in 3 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yc5A/nostruct-align/1yc5A.t06-thin90.a2m.gz # 1yc5A.t06-thin90.a2m with 610 sequences, total weight= 610 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29081 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yc5A/info/1yc5A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1yc5A/nostruct-align/1yc5A.t06-thin90.a2m.gz, have 1120 columns in 4 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w2wB/nostruct-align/1w2wB.t06-thin90.a2m.gz # 1w2wB.t06-thin90.a2m with 347 sequences, total weight= 146.457 avg weight= 0.422066 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30372 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w2wB/info/1w2wB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1w2wB/nostruct-align/1w2wB.t06-thin90.a2m.gz, have 1311 columns in 5 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o3uA/nostruct-align/1o3uA.t06-thin90.a2m.gz # 1o3uA.t06-thin90.a2m with 136 sequences, total weight= 136 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16245 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o3uA/info/1o3uA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1o3uA/nostruct-align/1o3uA.t06-thin90.a2m.gz, have 1431 columns in 6 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e19A/nostruct-align/1e19A.t06-thin90.a2m.gz # 1e19A.t06-thin90.a2m with 1314 sequences, total weight= 1314 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.218 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e19A/info/1e19A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1e19A/nostruct-align/1e19A.t06-thin90.a2m.gz, have 1744 columns in 7 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1z8kA/nostruct-align/1z8kA.t06-thin90.a2m.gz # 1z8kA.t06-thin90.a2m with 13 sequences, total weight= 2.51033 avg weight= 0.193102 13 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1z8kA/info/1z8kA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1z/1z8kA/nostruct-align/1z8kA.t06-thin90.a2m.gz, have 1918 columns in 8 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mtpA/nostruct-align/1mtpA.t06-thin90.a2m.gz # 1mtpA.t06-thin90.a2m with 913 sequences, total weight= 552.287 avg weight= 0.604915 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31049 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mtpA/info/1mtpA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mtpA/nostruct-align/1mtpA.t06-thin90.a2m.gz, have 2238 columns in 9 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ijyA/nostruct-align/1ijyA.t06-thin90.a2m.gz # 1ijyA.t06-thin90.a2m with 186 sequences, total weight= 60.1296 avg weight= 0.323277 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30129 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ijyA/info/1ijyA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1ijyA/nostruct-align/1ijyA.t06-thin90.a2m.gz, have 2360 columns in 10 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pg4A/nostruct-align/1pg4A.t06-thin90.a2m.gz # 1pg4A.t06-thin90.a2m with 7573 sequences, total weight= 7573 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05469 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pg4A/info/1pg4A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1pg4A/nostruct-align/1pg4A.t06-thin90.a2m.gz, have 2993 columns in 11 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f5nA/nostruct-align/1f5nA.t06-thin90.a2m.gz # 1f5nA.t06-thin90.a2m with 512 sequences, total weight= 512 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.960062 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f5nA/info/1f5nA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1f5nA/nostruct-align/1f5nA.t06-thin90.a2m.gz, have 3563 columns in 12 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b5eA/nostruct-align/1b5eA.t06-thin90.a2m.gz # 1b5eA.t06-thin90.a2m with 358 sequences, total weight= 55.2918 avg weight= 0.154446 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b5eA/info/1b5eA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1b/1b5eA/nostruct-align/1b5eA.t06-thin90.a2m.gz, have 3804 columns in 13 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gy7A/nostruct-align/1gy7A.t06-thin90.a2m.gz # 1gy7A.t06-thin90.a2m with 161 sequences, total weight= 117.792 avg weight= 0.731629 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3013 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gy7A/info/1gy7A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gy7A/nostruct-align/1gy7A.t06-thin90.a2m.gz, have 3925 columns in 14 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a3aA/nostruct-align/1a3aA.t06-thin90.a2m.gz # 1a3aA.t06-thin90.a2m with 710 sequences, total weight= 710 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22356 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a3aA/info/1a3aA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1a/1a3aA/nostruct-align/1a3aA.t06-thin90.a2m.gz, have 4070 columns in 15 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w1oA/nostruct-align/1w1oA.t06-thin90.a2m.gz # 1w1oA.t06-thin90.a2m with 2018 sequences, total weight= 2018 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.906905 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w1oA/info/1w1oA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1w1oA/nostruct-align/1w1oA.t06-thin90.a2m.gz, have 4549 columns in 16 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gvdA/nostruct-align/1gvdA.t06-thin90.a2m.gz # 1gvdA.t06-thin90.a2m with 970 sequences, total weight= 39.4538 avg weight= 0.040674 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30072 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gvdA/info/1gvdA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gvdA/nostruct-align/1gvdA.t06-thin90.a2m.gz, have 4601 columns in 17 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uj2A/nostruct-align/1uj2A.t06-thin90.a2m.gz # 1uj2A.t06-thin90.a2m with 4309 sequences, total weight= 4309 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.862529 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uj2A/info/1uj2A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1uj2A/nostruct-align/1uj2A.t06-thin90.a2m.gz, have 4814 columns in 18 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l7aA/nostruct-align/1l7aA.t06-thin90.a2m.gz # 1l7aA.t06-thin90.a2m with 14433 sequences, total weight= 14433 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.662001 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l7aA/info/1l7aA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1l7aA/nostruct-align/1l7aA.t06-thin90.a2m.gz, have 5132 columns in 19 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kmtA/nostruct-align/1kmtA.t06-thin90.a2m.gz # 1kmtA.t06-thin90.a2m with 74 sequences, total weight= 18.0438 avg weight= 0.243835 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kmtA/info/1kmtA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kmtA/nostruct-align/1kmtA.t06-thin90.a2m.gz, have 5270 columns in 20 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bkxA/nostruct-align/2bkxA.t06-thin90.a2m.gz # 2bkxA.t06-thin90.a2m with 535 sequences, total weight= 171.41 avg weight= 0.320393 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3095 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bkxA/info/2bkxA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2b/2bkxA/nostruct-align/2bkxA.t06-thin90.a2m.gz, have 5512 columns in 21 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1ji1A/nostruct-align/1ji1A.t06-thin90.a2m.gz # 1ji1A.t06-thin90.a2m with 2458 sequences, total weight= 2458 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03233 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1ji1A/info/1ji1A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1ji1A/nostruct-align/1ji1A.t06-thin90.a2m.gz, have 6149 columns in 22 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1luqA/nostruct-align/1luqA.t06-thin90.a2m.gz # 1luqA.t06-thin90.a2m with 40 sequences, total weight= 17.4952 avg weight= 0.43738 31 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1luqA/info/1luqA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1luqA/nostruct-align/1luqA.t06-thin90.a2m.gz, have 6268 columns in 23 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h2wA/nostruct-align/1h2wA.t06-thin90.a2m.gz # 1h2wA.t06-thin90.a2m with 9022 sequences, total weight= 9022 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.841952 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h2wA/info/1h2wA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1h2wA/nostruct-align/1h2wA.t06-thin90.a2m.gz, have 6978 columns in 24 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wvfA/nostruct-align/1wvfA.t06-thin90.a2m.gz # 1wvfA.t06-thin90.a2m with 2037 sequences, total weight= 2037 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.89139 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wvfA/info/1wvfA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1wvfA/nostruct-align/1wvfA.t06-thin90.a2m.gz, have 7493 columns in 25 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h2bA/nostruct-align/1h2bA.t06-thin90.a2m.gz # 1h2bA.t06-thin90.a2m with 4994 sequences, total weight= 4994 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1763 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h2bA/info/1h2bA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1h2bA/nostruct-align/1h2bA.t06-thin90.a2m.gz, have 7836 columns in 26 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bupA/nostruct-align/1bupA.t06-thin90.a2m.gz # 1bupA.t06-thin90.a2m with 2089 sequences, total weight= 2089 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23706 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bupA/info/1bupA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1b/1bupA/nostruct-align/1bupA.t06-thin90.a2m.gz, have 8214 columns in 27 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lm4A/nostruct-align/1lm4A.t06-thin90.a2m.gz # 1lm4A.t06-thin90.a2m with 554 sequences, total weight= 85.4326 avg weight= 0.15421 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30343 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lm4A/info/1lm4A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1lm4A/nostruct-align/1lm4A.t06-thin90.a2m.gz, have 8404 columns in 28 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gsoA/nostruct-align/1gsoA.t06-thin90.a2m.gz # 1gsoA.t06-thin90.a2m with 3787 sequences, total weight= 3787 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06105 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gsoA/info/1gsoA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gsoA/nostruct-align/1gsoA.t06-thin90.a2m.gz, have 8823 columns in 29 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d0cA/nostruct-align/1d0cA.t06-thin90.a2m.gz # 1d0cA.t06-thin90.a2m with 98 sequences, total weight= 9.19099 avg weight= 0.0937856 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d0cA/info/1d0cA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1d0cA/nostruct-align/1d0cA.t06-thin90.a2m.gz, have 9239 columns in 30 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oaa/nostruct-align/1oaa.t06-thin90.a2m.gz # 1oaa.t06-thin90.a2m with 12501 sequences, total weight= 12501 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11092 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oaa/info/1oaa.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1oaa/nostruct-align/1oaa.t06-thin90.a2m.gz, have 9498 columns in 31 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gq6A/nostruct-align/1gq6A.t06-thin90.a2m.gz # 1gq6A.t06-thin90.a2m with 588 sequences, total weight= 588 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21947 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gq6A/info/1gq6A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gq6A/nostruct-align/1gq6A.t06-thin90.a2m.gz, have 9793 columns in 32 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ubkL/nostruct-align/1ubkL.t06-thin90.a2m.gz # 1ubkL.t06-thin90.a2m with 645 sequences, total weight= 580.621 avg weight= 0.900187 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30154 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ubkL/info/1ubkL.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1ubkL/nostruct-align/1ubkL.t06-thin90.a2m.gz, have 10327 columns in 33 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uekA/nostruct-align/1uekA.t06-thin90.a2m.gz # 1uekA.t06-thin90.a2m with 1251 sequences, total weight= 1251 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04065 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uekA/info/1uekA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1uekA/nostruct-align/1uekA.t06-thin90.a2m.gz, have 10595 columns in 34 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wdvA/nostruct-align/1wdvA.t06-thin90.a2m.gz # 1wdvA.t06-thin90.a2m with 649 sequences, total weight= 649 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21029 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wdvA/info/1wdvA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1wdvA/nostruct-align/1wdvA.t06-thin90.a2m.gz, have 10745 columns in 35 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kjlA/nostruct-align/1kjlA.t06-thin90.a2m.gz # 1kjlA.t06-thin90.a2m with 346 sequences, total weight= 262.24 avg weight= 0.757919 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30241 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kjlA/info/1kjlA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kjlA/nostruct-align/1kjlA.t06-thin90.a2m.gz, have 10883 columns in 36 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g2rA/nostruct-align/1g2rA.t06-thin90.a2m.gz # 1g2rA.t06-thin90.a2m with 172 sequences, total weight= 64.9996 avg weight= 0.377905 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30078 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g2rA/info/1g2rA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1g2rA/nostruct-align/1g2rA.t06-thin90.a2m.gz, have 10977 columns in 37 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s7kA/nostruct-align/1s7kA.t06-thin90.a2m.gz # 1s7kA.t06-thin90.a2m with 6946 sequences, total weight= 6946 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.827668 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s7kA/info/1s7kA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1s7kA/nostruct-align/1s7kA.t06-thin90.a2m.gz, have 11135 columns in 38 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g5tA/nostruct-align/1g5tA.t06-thin90.a2m.gz # 1g5tA.t06-thin90.a2m with 248 sequences, total weight= 19.0567 avg weight= 0.0768413 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g5tA/info/1g5tA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1g5tA/nostruct-align/1g5tA.t06-thin90.a2m.gz, have 11292 columns in 39 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e0tA/nostruct-align/1e0tA.t06-thin90.a2m.gz # 1e0tA.t06-thin90.a2m with 587 sequences, total weight= 36.9222 avg weight= 0.0628999 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e0tA/info/1e0tA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1e0tA/nostruct-align/1e0tA.t06-thin90.a2m.gz, have 11738 columns in 40 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p0hA/nostruct-align/1p0hA.t06-thin90.a2m.gz # 1p0hA.t06-thin90.a2m with 7870 sequences, total weight= 7870 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.778243 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p0hA/info/1p0hA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1p0hA/nostruct-align/1p0hA.t06-thin90.a2m.gz, have 12028 columns in 41 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1molA/nostruct-align/1molA.t06-thin90.a2m.gz # 1molA.t06-thin90.a2m with 3 sequences, total weight= 2.65834 avg weight= 0.886113 6 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1molA/info/1molA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1molA/nostruct-align/1molA.t06-thin90.a2m.gz, have 12122 columns in 42 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1osyA/nostruct-align/1osyA.t06-thin90.a2m.gz # 1osyA.t06-thin90.a2m with 3 sequences, total weight= 2.24944 avg weight= 0.749813 7 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1osyA/info/1osyA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1osyA/nostruct-align/1osyA.t06-thin90.a2m.gz, have 12236 columns in 43 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sbp/nostruct-align/1sbp.t06-thin90.a2m.gz # 1sbp.t06-thin90.a2m with 2956 sequences, total weight= 2956 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.832171 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sbp/info/1sbp.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1sbp/nostruct-align/1sbp.t06-thin90.a2m.gz, have 12545 columns in 44 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pvgA/nostruct-align/1pvgA.t06-thin90.a2m.gz # 1pvgA.t06-thin90.a2m with 1196 sequences, total weight= 144.027 avg weight= 0.120424 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30932 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pvgA/info/1pvgA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1pvgA/nostruct-align/1pvgA.t06-thin90.a2m.gz, have 12923 columns in 45 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1st9A/nostruct-align/1st9A.t06-thin90.a2m.gz # 1st9A.t06-thin90.a2m with 5376 sequences, total weight= 5376 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.966284 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1st9A/info/1st9A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1st9A/nostruct-align/1st9A.t06-thin90.a2m.gz, have 13060 columns in 46 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f1eA/nostruct-align/1f1eA.t06-thin90.a2m.gz # 1f1eA.t06-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.601427 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f1eA/info/1f1eA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1f1eA/nostruct-align/1f1eA.t06-thin90.a2m.gz, have 13211 columns in 47 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ikpA/nostruct-align/1ikpA.t06-thin90.a2m.gz # 1ikpA.t06-thin90.a2m with 282 sequences, total weight= 31.5405 avg weight= 0.111846 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ikpA/info/1ikpA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1ikpA/nostruct-align/1ikpA.t06-thin90.a2m.gz, have 13810 columns in 48 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1swxA/nostruct-align/1swxA.t06-thin90.a2m.gz # 1swxA.t06-thin90.a2m with 98 sequences, total weight= 68.2401 avg weight= 0.696328 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1swxA/info/1swxA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1swxA/nostruct-align/1swxA.t06-thin90.a2m.gz, have 14008 columns in 49 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uozA/nostruct-align/1uozA.t06-thin90.a2m.gz # 1uozA.t06-thin90.a2m with 93 sequences, total weight= 21.5323 avg weight= 0.23153 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uozA/info/1uozA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1uozA/nostruct-align/1uozA.t06-thin90.a2m.gz, have 14308 columns in 50 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1id0A/nostruct-align/1id0A.t06-thin90.a2m.gz # 1id0A.t06-thin90.a2m with 10391 sequences, total weight= 10391 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21528 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1id0A/info/1id0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1id0A/nostruct-align/1id0A.t06-thin90.a2m.gz, have 14454 columns in 51 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2m/2mcm/nostruct-align/2mcm.t06-thin90.a2m.gz # 2mcm.t06-thin90.a2m with 8 sequences, total weight= 4.83837 avg weight= 0.604797 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2m/2mcm/info/2mcm.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2m/2mcm/nostruct-align/2mcm.t06-thin90.a2m.gz, have 14566 columns in 52 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a12A/nostruct-align/1a12A.t06-thin90.a2m.gz # 1a12A.t06-thin90.a2m with 860 sequences, total weight= 860 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02492 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a12A/info/1a12A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1a/1a12A/nostruct-align/1a12A.t06-thin90.a2m.gz, have 14967 columns in 53 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k2xA/nostruct-align/1k2xA.t06-thin90.a2m.gz # 1k2xA.t06-thin90.a2m with 220 sequences, total weight= 38.6482 avg weight= 0.175674 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k2xA/info/1k2xA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1k2xA/nostruct-align/1k2xA.t06-thin90.a2m.gz, have 15123 columns in 54 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jp4A/nostruct-align/1jp4A.t06-thin90.a2m.gz # 1jp4A.t06-thin90.a2m with 1278 sequences, total weight= 1278 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.068 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jp4A/info/1jp4A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jp4A/nostruct-align/1jp4A.t06-thin90.a2m.gz, have 15425 columns in 55 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sjyA/nostruct-align/1sjyA.t06-thin90.a2m.gz # 1sjyA.t06-thin90.a2m with 3603 sequences, total weight= 3603 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.862662 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sjyA/info/1sjyA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1sjyA/nostruct-align/1sjyA.t06-thin90.a2m.gz, have 15579 columns in 56 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nu4A/nostruct-align/1nu4A.t06-thin90.a2m.gz # 1nu4A.t06-thin90.a2m with 5284 sequences, total weight= 5284 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1591 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nu4A/info/1nu4A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nu4A/nostruct-align/1nu4A.t06-thin90.a2m.gz, have 15670 columns in 57 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j77A/nostruct-align/1j77A.t06-thin90.a2m.gz # 1j77A.t06-thin90.a2m with 190 sequences, total weight= 190 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18925 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j77A/info/1j77A.stride-mixed.n_notor WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1j/1j77A/nostruct-align/1j77A.t06-thin90.a2m.gz, have 15869 columns in 58 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1btkA/nostruct-align/1btkA.t06-thin90.a2m.gz # 1btkA.t06-thin90.a2m with 186 sequences, total weight= 186 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16289 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1btkA/info/1btkA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1b/1btkA/nostruct-align/1btkA.t06-thin90.a2m.gz, have 16029 columns in 59 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kq1A/nostruct-align/1kq1A.t06-thin90.a2m.gz # 1kq1A.t06-thin90.a2m with 81 sequences, total weight= 7.01477 avg weight= 0.0866021 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kq1A/info/1kq1A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kq1A/nostruct-align/1kq1A.t06-thin90.a2m.gz, have 16089 columns in 60 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1ktgA/nostruct-align/1ktgA.t06-thin90.a2m.gz # 1ktgA.t06-thin90.a2m with 3546 sequences, total weight= 3546 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.924849 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1ktgA/info/1ktgA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1ktgA/nostruct-align/1ktgA.t06-thin90.a2m.gz, have 16226 columns in 61 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ockA/nostruct-align/1ockA.t06-thin90.a2m.gz # 1ockA.t06-thin90.a2m with 1324 sequences, total weight= 371.663 avg weight= 0.280712 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32408 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ockA/info/1ockA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1ockA/nostruct-align/1ockA.t06-thin90.a2m.gz, have 16638 columns in 62 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nkgA/nostruct-align/1nkgA.t06-thin90.a2m.gz # 1nkgA.t06-thin90.a2m with 54 sequences, total weight= 25.8623 avg weight= 0.478931 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nkgA/info/1nkgA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nkgA/nostruct-align/1nkgA.t06-thin90.a2m.gz, have 17146 columns in 63 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y80A/nostruct-align/1y80A.t06-thin90.a2m.gz # 1y80A.t06-thin90.a2m with 519 sequences, total weight= 78.6957 avg weight= 0.151629 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3008 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y80A/info/1y80A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1y80A/nostruct-align/1y80A.t06-thin90.a2m.gz, have 17271 columns in 64 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f60B/nostruct-align/1f60B.t06-thin90.a2m.gz # 1f60B.t06-thin90.a2m with 96 sequences, total weight= 10.9788 avg weight= 0.114363 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f60B/info/1f60B.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1f60B/nostruct-align/1f60B.t06-thin90.a2m.gz, have 17361 columns in 65 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vcc/nostruct-align/1vcc.t06-thin90.a2m.gz # 1vcc.t06-thin90.a2m with 13 sequences, total weight= 3.1011 avg weight= 0.238546 14 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vcc/info/1vcc.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vcc/nostruct-align/1vcc.t06-thin90.a2m.gz, have 17438 columns in 66 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k3yA/nostruct-align/1k3yA.t06-thin90.a2m.gz # 1k3yA.t06-thin90.a2m with 3427 sequences, total weight= 3427 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.981039 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k3yA/info/1k3yA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1k3yA/nostruct-align/1k3yA.t06-thin90.a2m.gz, have 17659 columns in 67 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l6pA/nostruct-align/1l6pA.t06-thin90.a2m.gz # 1l6pA.t06-thin90.a2m with 140 sequences, total weight= 38.6302 avg weight= 0.27593 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30037 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l6pA/info/1l6pA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1l6pA/nostruct-align/1l6pA.t06-thin90.a2m.gz, have 17780 columns in 68 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3n/3nul/nostruct-align/3nul.t06-thin90.a2m.gz # 3nul.t06-thin90.a2m with 150 sequences, total weight= 54.8652 avg weight= 0.365768 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3n/3nul/info/3nul.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/3n/3nul/nostruct-align/3nul.t06-thin90.a2m.gz, have 17910 columns in 69 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f2tB/nostruct-align/1f2tB.t06-thin90.a2m.gz # 1f2tB.t06-thin90.a2m with 19220 sequences, total weight= 19220 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28595 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f2tB/info/1f2tB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1f2tB/nostruct-align/1f2tB.t06-thin90.a2m.gz, have 18053 columns in 70 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u8vA/nostruct-align/1u8vA.t06-thin90.a2m.gz # 1u8vA.t06-thin90.a2m with 813 sequences, total weight= 813 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0589 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u8vA/info/1u8vA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1u8vA/nostruct-align/1u8vA.t06-thin90.a2m.gz, have 18543 columns in 71 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qj4A/nostruct-align/1qj4A.t06-thin90.a2m.gz # 1qj4A.t06-thin90.a2m with 10324 sequences, total weight= 10324 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.690183 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qj4A/info/1qj4A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qj4A/nostruct-align/1qj4A.t06-thin90.a2m.gz, have 18799 columns in 72 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r5mA/nostruct-align/1r5mA.t06-thin90.a2m.gz # 1r5mA.t06-thin90.a2m with 10977 sequences, total weight= 10977 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.740996 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r5mA/info/1r5mA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1r5mA/nostruct-align/1r5mA.t06-thin90.a2m.gz, have 19150 columns in 73 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o8bA/nostruct-align/1o8bA.t06-thin90.a2m.gz # 1o8bA.t06-thin90.a2m with 299 sequences, total weight= 17.595 avg weight= 0.0588462 43 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o8bA/info/1o8bA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1o8bA/nostruct-align/1o8bA.t06-thin90.a2m.gz, have 19318 columns in 74 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fg7A/nostruct-align/1fg7A.t06-thin90.a2m.gz # 1fg7A.t06-thin90.a2m with 7638 sequences, total weight= 7638 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.922443 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fg7A/info/1fg7A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1fg7A/nostruct-align/1fg7A.t06-thin90.a2m.gz, have 19672 columns in 75 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x7dA/nostruct-align/1x7dA.t06-thin90.a2m.gz # 1x7dA.t06-thin90.a2m with 1329 sequences, total weight= 1329 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.996092 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x7dA/info/1x7dA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1x7dA/nostruct-align/1x7dA.t06-thin90.a2m.gz, have 20012 columns in 76 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j2rA/nostruct-align/1j2rA.t06-thin90.a2m.gz # 1j2rA.t06-thin90.a2m with 1027 sequences, total weight= 1027 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14032 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j2rA/info/1j2rA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1j2rA/nostruct-align/1j2rA.t06-thin90.a2m.gz, have 20200 columns in 77 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pbyA/nostruct-align/1pbyA.t06-thin90.a2m.gz # 1pbyA.t06-thin90.a2m with 9 sequences, total weight= 4.80901 avg weight= 0.534334 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pbyA/info/1pbyA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1pbyA/nostruct-align/1pbyA.t06-thin90.a2m.gz, have 20689 columns in 78 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k5cA/nostruct-align/1k5cA.t06-thin90.a2m.gz # 1k5cA.t06-thin90.a2m with 539 sequences, total weight= 539 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21669 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k5cA/info/1k5cA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1k5cA/nostruct-align/1k5cA.t06-thin90.a2m.gz, have 21022 columns in 79 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dj0A/nostruct-align/1dj0A.t06-thin90.a2m.gz # 1dj0A.t06-thin90.a2m with 549 sequences, total weight= 118.444 avg weight= 0.215745 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30998 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dj0A/info/1dj0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1dj0A/nostruct-align/1dj0A.t06-thin90.a2m.gz, have 21286 columns in 80 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wpnA/nostruct-align/1wpnA.t06-thin90.a2m.gz # 1wpnA.t06-thin90.a2m with 441 sequences, total weight= 441 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17589 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wpnA/info/1wpnA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1wpnA/nostruct-align/1wpnA.t06-thin90.a2m.gz, have 21473 columns in 81 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q25A/nostruct-align/1q25A.t06-thin90.a2m.gz # 1q25A.t06-thin90.a2m with 264 sequences, total weight= 264 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12169 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q25A/info/1q25A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1q25A/nostruct-align/1q25A.t06-thin90.a2m.gz, have 21901 columns in 82 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sz7A/nostruct-align/1sz7A.t06-thin90.a2m.gz # 1sz7A.t06-thin90.a2m with 149 sequences, total weight= 106.412 avg weight= 0.714173 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30049 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sz7A/info/1sz7A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1sz7A/nostruct-align/1sz7A.t06-thin90.a2m.gz, have 22060 columns in 83 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hztA/nostruct-align/1hztA.t06-thin90.a2m.gz # 1hztA.t06-thin90.a2m with 3558 sequences, total weight= 3558 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.890189 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hztA/info/1hztA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1hztA/nostruct-align/1hztA.t06-thin90.a2m.gz, have 22213 columns in 84 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qopB/nostruct-align/1qopB.t06-thin90.a2m.gz # 1qopB.t06-thin90.a2m with 2439 sequences, total weight= 2439 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1694 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qopB/info/1qopB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qopB/nostruct-align/1qopB.t06-thin90.a2m.gz, have 22603 columns in 85 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l3lA/nostruct-align/1l3lA.t06-thin90.a2m.gz # 1l3lA.t06-thin90.a2m with 432 sequences, total weight= 432 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.876788 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l3lA/info/1l3lA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1l3lA/nostruct-align/1l3lA.t06-thin90.a2m.gz, have 22836 columns in 86 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ohlA/nostruct-align/1ohlA.t06-thin90.a2m.gz # 1ohlA.t06-thin90.a2m with 375 sequences, total weight= 12.3882 avg weight= 0.0330352 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ohlA/info/1ohlA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1ohlA/nostruct-align/1ohlA.t06-thin90.a2m.gz, have 23176 columns in 87 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oygA/nostruct-align/1oygA.t06-thin90.a2m.gz # 1oygA.t06-thin90.a2m with 434 sequences, total weight= 434 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19686 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oygA/info/1oygA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1oygA/nostruct-align/1oygA.t06-thin90.a2m.gz, have 23616 columns in 88 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1khcA/nostruct-align/1khcA.t06-thin90.a2m.gz # 1khcA.t06-thin90.a2m with 265 sequences, total weight= 265 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.043 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1khcA/info/1khcA.stride-mixed.n_notor WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1k/1khcA/nostruct-align/1khcA.t06-thin90.a2m.gz, have 23751 columns in 89 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ugpA/nostruct-align/1ugpA.t06-thin90.a2m.gz # 1ugpA.t06-thin90.a2m with 56 sequences, total weight= 8.98806 avg weight= 0.160501 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ugpA/info/1ugpA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1ugpA/nostruct-align/1ugpA.t06-thin90.a2m.gz, have 23954 columns in 90 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rmwA/nostruct-align/1rmwA.t06-thin90.a2m.gz # 1rmwA.t06-thin90.a2m with 265 sequences, total weight= 265 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09177 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rmwA/info/1rmwA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rmwA/nostruct-align/1rmwA.t06-thin90.a2m.gz, have 24165 columns in 91 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m93B/nostruct-align/1m93B.t06-thin90.a2m.gz # 1m93B.t06-thin90.a2m with 816 sequences, total weight= 262.724 avg weight= 0.321966 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31371 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m93B/info/1m93B.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1m93B/nostruct-align/1m93B.t06-thin90.a2m.gz, have 24410 columns in 92 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vr7A/nostruct-align/1vr7A.t06-thin90.a2m.gz # 1vr7A.t06-thin90.a2m with 139 sequences, total weight= 33.847 avg weight= 0.243503 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vr7A/info/1vr7A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vr7A/nostruct-align/1vr7A.t06-thin90.a2m.gz, have 24530 columns in 93 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1ve1A/nostruct-align/1ve1A.t06-thin90.a2m.gz # 1ve1A.t06-thin90.a2m with 2460 sequences, total weight= 2460 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2335 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1ve1A/info/1ve1A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1ve1A/nostruct-align/1ve1A.t06-thin90.a2m.gz, have 24832 columns in 94 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1twyA/nostruct-align/1twyA.t06-thin90.a2m.gz # 1twyA.t06-thin90.a2m with 1672 sequences, total weight= 1672 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.987187 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1twyA/info/1twyA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1twyA/nostruct-align/1twyA.t06-thin90.a2m.gz, have 25081 columns in 95 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d4tA/nostruct-align/1d4tA.t06-thin90.a2m.gz # 1d4tA.t06-thin90.a2m with 855 sequences, total weight= 763.756 avg weight= 0.893282 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3028 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d4tA/info/1d4tA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1d4tA/nostruct-align/1d4tA.t06-thin90.a2m.gz, have 25185 columns in 96 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2p/2pth/nostruct-align/2pth.t06-thin90.a2m.gz # 2pth.t06-thin90.a2m with 393 sequences, total weight= 36.0083 avg weight= 0.0916242 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30048 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2p/2pth/info/2pth.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2p/2pth/nostruct-align/2pth.t06-thin90.a2m.gz, have 25378 columns in 97 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sg6A/nostruct-align/1sg6A.t06-thin90.a2m.gz # 1sg6A.t06-thin90.a2m with 1326 sequences, total weight= 1326 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15863 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sg6A/info/1sg6A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1sg6A/nostruct-align/1sg6A.t06-thin90.a2m.gz, have 25755 columns in 98 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gxyA/nostruct-align/1gxyA.t06-thin90.a2m.gz # 1gxyA.t06-thin90.a2m with 72 sequences, total weight= 11.104 avg weight= 0.154222 31 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gxyA/info/1gxyA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gxyA/nostruct-align/1gxyA.t06-thin90.a2m.gz, have 25978 columns in 99 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hh8A/nostruct-align/1hh8A.t06-thin90.a2m.gz # 1hh8A.t06-thin90.a2m with 10755 sequences, total weight= 10755 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.744289 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hh8A/info/1hh8A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1hh8A/nostruct-align/1hh8A.t06-thin90.a2m.gz, have 26170 columns in 100 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1df4A/nostruct-align/1df4A.t06-thin90.a2m.gz # 1df4A.t06-thin90.a2m with 947 sequences, total weight= 9.06667 avg weight= 0.0095741 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1df4A/info/1df4A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1df4A/nostruct-align/1df4A.t06-thin90.a2m.gz, have 26227 columns in 101 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kyhA/nostruct-align/1kyhA.t06-thin90.a2m.gz # 1kyhA.t06-thin90.a2m with 2487 sequences, total weight= 2487 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.977782 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kyhA/info/1kyhA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kyhA/nostruct-align/1kyhA.t06-thin90.a2m.gz, have 26495 columns in 102 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u84A/nostruct-align/1u84A.t06-thin90.a2m.gz # 1u84A.t06-thin90.a2m with 7 sequences, total weight= 5.27658 avg weight= 0.753797 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u84A/info/1u84A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1u84A/nostruct-align/1u84A.t06-thin90.a2m.gz, have 26576 columns in 103 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nu0A/nostruct-align/1nu0A.t06-thin90.a2m.gz # 1nu0A.t06-thin90.a2m with 344 sequences, total weight= 46.9677 avg weight= 0.136534 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30132 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nu0A/info/1nu0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nu0A/nostruct-align/1nu0A.t06-thin90.a2m.gz, have 26707 columns in 104 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t06-thin90.a2m.gz # 1dciA.t06-thin90.a2m with 3043 sequences, total weight= 3043 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1588 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t06-thin90.a2m.gz, have 26982 columns in 105 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xdnA/nostruct-align/1xdnA.t06-thin90.a2m.gz # 1xdnA.t06-thin90.a2m with 12 sequences, total weight= 8.11753 avg weight= 0.676461 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xdnA/info/1xdnA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xdnA/nostruct-align/1xdnA.t06-thin90.a2m.gz, have 27247 columns in 106 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tr9A/nostruct-align/1tr9A.t06-thin90.a2m.gz # 1tr9A.t06-thin90.a2m with 862 sequences, total weight= 428.849 avg weight= 0.497504 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31232 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tr9A/info/1tr9A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1tr9A/nostruct-align/1tr9A.t06-thin90.a2m.gz, have 27577 columns in 107 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k6kA/nostruct-align/1k6kA.t06-thin90.a2m.gz # 1k6kA.t06-thin90.a2m with 312 sequences, total weight= 92.7493 avg weight= 0.297273 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30404 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k6kA/info/1k6kA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1k6kA/nostruct-align/1k6kA.t06-thin90.a2m.gz, have 27719 columns in 108 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h4rA/nostruct-align/1h4rA.t06-thin90.a2m.gz # 1h4rA.t06-thin90.a2m with 586 sequences, total weight= 586 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09565 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h4rA/info/1h4rA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1h4rA/nostruct-align/1h4rA.t06-thin90.a2m.gz, have 28013 columns in 109 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ryiA/nostruct-align/1ryiA.t06-thin90.a2m.gz # 1ryiA.t06-thin90.a2m with 11083 sequences, total weight= 11083 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.731037 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ryiA/info/1ryiA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1ryiA/nostruct-align/1ryiA.t06-thin90.a2m.gz, have 28377 columns in 110 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j30A/nostruct-align/1j30A.t06-thin90.a2m.gz # 1j30A.t06-thin90.a2m with 232 sequences, total weight= 120.58 avg weight= 0.519742 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30274 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j30A/info/1j30A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1j30A/nostruct-align/1j30A.t06-thin90.a2m.gz, have 28518 columns in 111 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ezgA/nostruct-align/1ezgA.t06-thin90.a2m.gz # 1ezgA.t06-thin90.a2m with 22 sequences, total weight= 2.69687 avg weight= 0.122585 15 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ezgA/info/1ezgA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1ezgA/nostruct-align/1ezgA.t06-thin90.a2m.gz, have 28600 columns in 112 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nzjA/nostruct-align/1nzjA.t06-thin90.a2m.gz # 1nzjA.t06-thin90.a2m with 1311 sequences, total weight= 1311 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19403 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nzjA/info/1nzjA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nzjA/nostruct-align/1nzjA.t06-thin90.a2m.gz, have 28873 columns in 113 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n62C/nostruct-align/1n62C.t06-thin90.a2m.gz # 1n62C.t06-thin90.a2m with 500 sequences, total weight= 500 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29896 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n62C/info/1n62C.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1n62C/nostruct-align/1n62C.t06-thin90.a2m.gz, have 29159 columns in 114 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t3iA/nostruct-align/1t3iA.t06-thin90.a2m.gz # 1t3iA.t06-thin90.a2m with 11608 sequences, total weight= 11608 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.813817 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t3iA/info/1t3iA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1t3iA/nostruct-align/1t3iA.t06-thin90.a2m.gz, have 29565 columns in 115 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tzvA/nostruct-align/1tzvA.t06-thin90.a2m.gz # 1tzvA.t06-thin90.a2m with 594 sequences, total weight= 594 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26251 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tzvA/info/1tzvA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1tzvA/nostruct-align/1tzvA.t06-thin90.a2m.gz, have 29706 columns in 116 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nuyA/nostruct-align/1nuyA.t06-thin90.a2m.gz # 1nuyA.t06-thin90.a2m with 1028 sequences, total weight= 1028 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28365 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nuyA/info/1nuyA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nuyA/nostruct-align/1nuyA.t06-thin90.a2m.gz, have 30034 columns in 117 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xocA/nostruct-align/1xocA.t06-thin90.a2m.gz # 1xocA.t06-thin90.a2m with 1961 sequences, total weight= 1961 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07402 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xocA/info/1xocA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xocA/nostruct-align/1xocA.t06-thin90.a2m.gz, have 30538 columns in 118 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k0mA/nostruct-align/1k0mA.t06-thin90.a2m.gz # 1k0mA.t06-thin90.a2m with 3593 sequences, total weight= 3593 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.934362 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k0mA/info/1k0mA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1k0mA/nostruct-align/1k0mA.t06-thin90.a2m.gz, have 30773 columns in 119 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v5dA/nostruct-align/1v5dA.t06-thin90.a2m.gz # 1v5dA.t06-thin90.a2m with 101 sequences, total weight= 101 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16936 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v5dA/info/1v5dA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1v5dA/nostruct-align/1v5dA.t06-thin90.a2m.gz, have 31159 columns in 120 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ekgA/nostruct-align/1ekgA.t06-thin90.a2m.gz # 1ekgA.t06-thin90.a2m with 124 sequences, total weight= 39.3672 avg weight= 0.317478 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ekgA/info/1ekgA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1ekgA/nostruct-align/1ekgA.t06-thin90.a2m.gz, have 31278 columns in 121 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v33A/nostruct-align/1v33A.t06-thin90.a2m.gz # 1v33A.t06-thin90.a2m with 129 sequences, total weight= 129 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25571 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v33A/info/1v33A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1v33A/nostruct-align/1v33A.t06-thin90.a2m.gz, have 31624 columns in 122 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1es5A/nostruct-align/1es5A.t06-thin90.a2m.gz # 1es5A.t06-thin90.a2m with 979 sequences, total weight= 979 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08361 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1es5A/info/1es5A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1es5A/nostruct-align/1es5A.t06-thin90.a2m.gz, have 31884 columns in 123 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m7yA/nostruct-align/1m7yA.t06-thin90.a2m.gz # 1m7yA.t06-thin90.a2m with 7372 sequences, total weight= 7372 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.889016 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m7yA/info/1m7yA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1m7yA/nostruct-align/1m7yA.t06-thin90.a2m.gz, have 32308 columns in 124 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qauA/nostruct-align/1qauA.t06-thin90.a2m.gz # 1qauA.t06-thin90.a2m with 2441 sequences, total weight= 2441 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06924 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qauA/info/1qauA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qauA/nostruct-align/1qauA.t06-thin90.a2m.gz, have 32420 columns in 125 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vrmA/nostruct-align/1vrmA.t06-thin90.a2m.gz # 1vrmA.t06-thin90.a2m with 331 sequences, total weight= 112.149 avg weight= 0.33882 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30405 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vrmA/info/1vrmA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vrmA/nostruct-align/1vrmA.t06-thin90.a2m.gz, have 32729 columns in 126 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1ne2A/nostruct-align/1ne2A.t06-thin90.a2m.gz # 1ne2A.t06-thin90.a2m with 12721 sequences, total weight= 12721 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.755981 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1ne2A/info/1ne2A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1ne2A/nostruct-align/1ne2A.t06-thin90.a2m.gz, have 32905 columns in 127 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e6cA/nostruct-align/1e6cA.t06-thin90.a2m.gz # 1e6cA.t06-thin90.a2m with 7198 sequences, total weight= 7198 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.838792 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e6cA/info/1e6cA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1e6cA/nostruct-align/1e6cA.t06-thin90.a2m.gz, have 33075 columns in 128 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ooyA/nostruct-align/1ooyA.t06-thin90.a2m.gz # 1ooyA.t06-thin90.a2m with 773 sequences, total weight= 773 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.293 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ooyA/info/1ooyA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1ooyA/nostruct-align/1ooyA.t06-thin90.a2m.gz, have 33538 columns in 129 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ojrA/nostruct-align/1ojrA.t06-thin90.a2m.gz # 1ojrA.t06-thin90.a2m with 665 sequences, total weight= 665 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11017 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ojrA/info/1ojrA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1ojrA/nostruct-align/1ojrA.t06-thin90.a2m.gz, have 33812 columns in 130 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xauA/nostruct-align/1xauA.t06-thin90.a2m.gz # 1xauA.t06-thin90.a2m with 5 sequences, total weight= 3.04299 avg weight= 0.608598 11 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xauA/info/1xauA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xauA/nostruct-align/1xauA.t06-thin90.a2m.gz, have 33916 columns in 131 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sbxA/nostruct-align/1sbxA.t06-thin90.a2m.gz # 1sbxA.t06-thin90.a2m with 43 sequences, total weight= 7.70133 avg weight= 0.179101 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sbxA/info/1sbxA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1sbxA/nostruct-align/1sbxA.t06-thin90.a2m.gz, have 34022 columns in 132 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h4pA/nostruct-align/1h4pA.t06-thin90.a2m.gz # 1h4pA.t06-thin90.a2m with 2253 sequences, total weight= 2253 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.905794 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h4pA/info/1h4pA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1h4pA/nostruct-align/1h4pA.t06-thin90.a2m.gz, have 34430 columns in 133 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xs0A/nostruct-align/1xs0A.t06-thin90.a2m.gz # 1xs0A.t06-thin90.a2m with 20 sequences, total weight= 11.3756 avg weight= 0.568781 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xs0A/info/1xs0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xs0A/nostruct-align/1xs0A.t06-thin90.a2m.gz, have 34558 columns in 134 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sx5A/nostruct-align/1sx5A.t06-thin90.a2m.gz # 1sx5A.t06-thin90.a2m with 5 sequences, total weight= 4.59982 avg weight= 0.919963 11 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sx5A/info/1sx5A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1sx5A/nostruct-align/1sx5A.t06-thin90.a2m.gz, have 34802 columns in 135 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qy1A/nostruct-align/1qy1A.t06-thin90.a2m.gz # 1qy1A.t06-thin90.a2m with 539 sequences, total weight= 539 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03113 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qy1A/info/1qy1A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qy1A/nostruct-align/1qy1A.t06-thin90.a2m.gz, have 34959 columns in 136 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2igd/nostruct-align/2igd.t06-thin90.a2m.gz # 2igd.t06-thin90.a2m with 15 sequences, total weight= 3.39421 avg weight= 0.22628 14 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2igd/info/2igd.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2i/2igd/nostruct-align/2igd.t06-thin90.a2m.gz, have 35020 columns in 137 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lc0A/nostruct-align/1lc0A.t06-thin90.a2m.gz # 1lc0A.t06-thin90.a2m with 3251 sequences, total weight= 3251 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.875065 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lc0A/info/1lc0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1lc0A/nostruct-align/1lc0A.t06-thin90.a2m.gz, have 35310 columns in 138 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v30A/nostruct-align/1v30A.t06-thin90.a2m.gz # 1v30A.t06-thin90.a2m with 10 sequences, total weight= 10 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20528 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v30A/info/1v30A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1v30A/nostruct-align/1v30A.t06-thin90.a2m.gz, have 35428 columns in 139 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dfuP/nostruct-align/1dfuP.t06-thin90.a2m.gz # 1dfuP.t06-thin90.a2m with 262 sequences, total weight= 30.8623 avg weight= 0.117795 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dfuP/info/1dfuP.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1dfuP/nostruct-align/1dfuP.t06-thin90.a2m.gz, have 35522 columns in 140 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1po5A/nostruct-align/1po5A.t06-thin90.a2m.gz # 1po5A.t06-thin90.a2m with 5700 sequences, total weight= 5700 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00629 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1po5A/info/1po5A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1po5A/nostruct-align/1po5A.t06-thin90.a2m.gz, have 35987 columns in 141 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1md6A/nostruct-align/1md6A.t06-thin90.a2m.gz # 1md6A.t06-thin90.a2m with 125 sequences, total weight= 41.5828 avg weight= 0.332663 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1md6A/info/1md6A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1md6A/nostruct-align/1md6A.t06-thin90.a2m.gz, have 36141 columns in 142 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qwrA/nostruct-align/1qwrA.t06-thin90.a2m.gz # 1qwrA.t06-thin90.a2m with 266 sequences, total weight= 114.19 avg weight= 0.429286 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30284 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qwrA/info/1qwrA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qwrA/nostruct-align/1qwrA.t06-thin90.a2m.gz, have 36456 columns in 143 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uwkA/nostruct-align/1uwkA.t06-thin90.a2m.gz # 1uwkA.t06-thin90.a2m with 139 sequences, total weight= 6.86368 avg weight= 0.049379 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uwkA/info/1uwkA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1uwkA/nostruct-align/1uwkA.t06-thin90.a2m.gz, have 37010 columns in 144 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1upqA/nostruct-align/1upqA.t06-thin90.a2m.gz # 1upqA.t06-thin90.a2m with 1943 sequences, total weight= 1943 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.952654 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1upqA/info/1upqA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1upqA/nostruct-align/1upqA.t06-thin90.a2m.gz, have 37117 columns in 145 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pwgA/nostruct-align/1pwgA.t06-thin90.a2m.gz # 1pwgA.t06-thin90.a2m with 1362 sequences, total weight= 1362 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.979061 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pwgA/info/1pwgA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1pwgA/nostruct-align/1pwgA.t06-thin90.a2m.gz, have 37462 columns in 146 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jx6A/nostruct-align/1jx6A.t06-thin90.a2m.gz # 1jx6A.t06-thin90.a2m with 3088 sequences, total weight= 3088 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.945131 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jx6A/info/1jx6A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jx6A/nostruct-align/1jx6A.t06-thin90.a2m.gz, have 37800 columns in 147 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tqgA/nostruct-align/1tqgA.t06-thin90.a2m.gz # 1tqgA.t06-thin90.a2m with 475 sequences, total weight= 361.534 avg weight= 0.761125 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30471 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tqgA/info/1tqgA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1tqgA/nostruct-align/1tqgA.t06-thin90.a2m.gz, have 37905 columns in 148 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f5vA/nostruct-align/1f5vA.t06-thin90.a2m.gz # 1f5vA.t06-thin90.a2m with 1275 sequences, total weight= 1275 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11558 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f5vA/info/1f5vA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1f5vA/nostruct-align/1f5vA.t06-thin90.a2m.gz, have 38145 columns in 149 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fcqA/nostruct-align/1fcqA.t06-thin90.a2m.gz # 1fcqA.t06-thin90.a2m with 81 sequences, total weight= 14.0389 avg weight= 0.17332 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fcqA/info/1fcqA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1fcqA/nostruct-align/1fcqA.t06-thin90.a2m.gz, have 38459 columns in 150 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pbyB/nostruct-align/1pbyB.t06-thin90.a2m.gz # 1pbyB.t06-thin90.a2m with 7947 sequences, total weight= 7947 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.682326 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pbyB/info/1pbyB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1pbyB/nostruct-align/1pbyB.t06-thin90.a2m.gz, have 38796 columns in 151 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b3aA/nostruct-align/1b3aA.t06-thin90.a2m.gz # 1b3aA.t06-thin90.a2m with 354 sequences, total weight= 92.1522 avg weight= 0.260317 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30481 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b3aA/info/1b3aA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1b/1b3aA/nostruct-align/1b3aA.t06-thin90.a2m.gz, have 38863 columns in 152 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dqzA/nostruct-align/1dqzA.t06-thin90.a2m.gz # 1dqzA.t06-thin90.a2m with 5616 sequences, total weight= 5616 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.659351 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dqzA/info/1dqzA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1dqzA/nostruct-align/1dqzA.t06-thin90.a2m.gz, have 39143 columns in 153 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rkuA/nostruct-align/1rkuA.t06-thin90.a2m.gz # 1rkuA.t06-thin90.a2m with 7400 sequences, total weight= 7400 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.895135 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rkuA/info/1rkuA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rkuA/nostruct-align/1rkuA.t06-thin90.a2m.gz, have 39349 columns in 154 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hfeS/nostruct-align/1hfeS.t06-thin90.a2m.gz # 1hfeS.t06-thin90.a2m with 62 sequences, total weight= 19.1304 avg weight= 0.308554 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hfeS/info/1hfeS.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1hfeS/nostruct-align/1hfeS.t06-thin90.a2m.gz, have 39437 columns in 155 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nnhA/nostruct-align/1nnhA.t06-thin90.a2m.gz # 1nnhA.t06-thin90.a2m with 1847 sequences, total weight= 1847 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19205 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nnhA/info/1nnhA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nnhA/nostruct-align/1nnhA.t06-thin90.a2m.gz, have 39730 columns in 156 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vkiA/nostruct-align/1vkiA.t06-thin90.a2m.gz # 1vkiA.t06-thin90.a2m with 611 sequences, total weight= 611 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23376 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vkiA/info/1vkiA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vkiA/nostruct-align/1vkiA.t06-thin90.a2m.gz, have 39895 columns in 157 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o66A/nostruct-align/1o66A.t06-thin90.a2m.gz # 1o66A.t06-thin90.a2m with 316 sequences, total weight= 13.1355 avg weight= 0.0415679 37 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o66A/info/1o66A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1o66A/nostruct-align/1o66A.t06-thin90.a2m.gz, have 40144 columns in 158 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xfkA/nostruct-align/1xfkA.t06-thin90.a2m.gz # 1xfkA.t06-thin90.a2m with 595 sequences, total weight= 595 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21057 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xfkA/info/1xfkA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xfkA/nostruct-align/1xfkA.t06-thin90.a2m.gz, have 40468 columns in 159 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ybiA/nostruct-align/1ybiA.t06-thin90.a2m.gz # 1ybiA.t06-thin90.a2m with 367 sequences, total weight= 367 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02009 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ybiA/info/1ybiA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1ybiA/nostruct-align/1ybiA.t06-thin90.a2m.gz, have 40752 columns in 160 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vicA/nostruct-align/1vicA.t06-thin90.a2m.gz # 1vicA.t06-thin90.a2m with 3685 sequences, total weight= 3685 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.941251 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vicA/info/1vicA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vicA/nostruct-align/1vicA.t06-thin90.a2m.gz, have 41007 columns in 161 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j6oA/nostruct-align/1j6oA.t06-thin90.a2m.gz # 1j6oA.t06-thin90.a2m with 882 sequences, total weight= 882 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17363 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j6oA/info/1j6oA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1j6oA/nostruct-align/1j6oA.t06-thin90.a2m.gz, have 41267 columns in 162 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tukA/nostruct-align/1tukA.t06-thin90.a2m.gz # 1tukA.t06-thin90.a2m with 69 sequences, total weight= 14.3458 avg weight= 0.20791 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tukA/info/1tukA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1tukA/nostruct-align/1tukA.t06-thin90.a2m.gz, have 41334 columns in 163 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h4aX/nostruct-align/1h4aX.t06-thin90.a2m.gz # 1h4aX.t06-thin90.a2m with 280 sequences, total weight= 53.7187 avg weight= 0.191853 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h4aX/info/1h4aX.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1h4aX/nostruct-align/1h4aX.t06-thin90.a2m.gz, have 41507 columns in 164 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xteA/nostruct-align/1xteA.t06-thin90.a2m.gz # 1xteA.t06-thin90.a2m with 658 sequences, total weight= 658 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11111 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xteA/info/1xteA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xteA/nostruct-align/1xteA.t06-thin90.a2m.gz, have 41623 columns in 165 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i1wA/nostruct-align/1i1wA.t06-thin90.a2m.gz # 1i1wA.t06-thin90.a2m with 618 sequences, total weight= 618 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02794 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i1wA/info/1i1wA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1i1wA/nostruct-align/1i1wA.t06-thin90.a2m.gz, have 41926 columns in 166 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1ten/nostruct-align/1ten.t06-thin90.a2m.gz # 1ten.t06-thin90.a2m with 4672 sequences, total weight= 4672 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11383 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1ten/info/1ten.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1ten/nostruct-align/1ten.t06-thin90.a2m.gz, have 42015 columns in 167 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cb0A/nostruct-align/1cb0A.t06-thin90.a2m.gz # 1cb0A.t06-thin90.a2m with 933 sequences, total weight= 933 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1181 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cb0A/info/1cb0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1c/1cb0A/nostruct-align/1cb0A.t06-thin90.a2m.gz, have 42283 columns in 168 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oalA/nostruct-align/1oalA.t06-thin90.a2m.gz # 1oalA.t06-thin90.a2m with 479 sequences, total weight= 50.9225 avg weight= 0.10631 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3008 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oalA/info/1oalA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1oalA/nostruct-align/1oalA.t06-thin90.a2m.gz, have 42434 columns in 169 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1deuA/nostruct-align/1deuA.t06-thin90.a2m.gz # 1deuA.t06-thin90.a2m with 1596 sequences, total weight= 1596 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20976 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1deuA/info/1deuA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1deuA/nostruct-align/1deuA.t06-thin90.a2m.gz, have 42709 columns in 170 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ygtA/nostruct-align/1ygtA.t06-thin90.a2m.gz # 1ygtA.t06-thin90.a2m with 124 sequences, total weight= 66.0134 avg weight= 0.532366 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30042 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ygtA/info/1ygtA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1ygtA/nostruct-align/1ygtA.t06-thin90.a2m.gz, have 42813 columns in 171 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oh0A/nostruct-align/1oh0A.t06-thin90.a2m.gz # 1oh0A.t06-thin90.a2m with 1108 sequences, total weight= 1108 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.829527 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oh0A/info/1oh0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1oh0A/nostruct-align/1oh0A.t06-thin90.a2m.gz, have 42938 columns in 172 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1byi/nostruct-align/1byi.t06-thin90.a2m.gz # 1byi.t06-thin90.a2m with 4120 sequences, total weight= 4120 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.932475 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1byi/info/1byi.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1b/1byi/nostruct-align/1byi.t06-thin90.a2m.gz, have 43162 columns in 173 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wkqA/nostruct-align/1wkqA.t06-thin90.a2m.gz # 1wkqA.t06-thin90.a2m with 1333 sequences, total weight= 1333 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17481 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wkqA/info/1wkqA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1wkqA/nostruct-align/1wkqA.t06-thin90.a2m.gz, have 43320 columns in 174 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eexG/nostruct-align/1eexG.t06-thin90.a2m.gz # 1eexG.t06-thin90.a2m with 19 sequences, total weight= 4.65636 avg weight= 0.245072 19 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eexG/info/1eexG.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1eexG/nostruct-align/1eexG.t06-thin90.a2m.gz, have 43457 columns in 175 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m0kA/nostruct-align/1m0kA.t06-thin90.a2m.gz # 1m0kA.t06-thin90.a2m with 173 sequences, total weight= 66.4454 avg weight= 0.384077 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m0kA/info/1m0kA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1m0kA/nostruct-align/1m0kA.t06-thin90.a2m.gz, have 43679 columns in 176 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t0tV/nostruct-align/1t0tV.t06-thin90.a2m.gz # 1t0tV.t06-thin90.a2m with 79 sequences, total weight= 45.0824 avg weight= 0.570664 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t0tV/info/1t0tV.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1t0tV/nostruct-align/1t0tV.t06-thin90.a2m.gz, have 43922 columns in 177 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m6pA/nostruct-align/1m6pA.t06-thin90.a2m.gz # 1m6pA.t06-thin90.a2m with 332 sequences, total weight= 332 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23559 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m6pA/info/1m6pA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1m6pA/nostruct-align/1m6pA.t06-thin90.a2m.gz, have 44068 columns in 178 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e6uA/nostruct-align/1e6uA.t06-thin90.a2m.gz # 1e6uA.t06-thin90.a2m with 11410 sequences, total weight= 11410 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.923237 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e6uA/info/1e6uA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1e6uA/nostruct-align/1e6uA.t06-thin90.a2m.gz, have 44383 columns in 179 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q5yA/nostruct-align/1q5yA.t06-thin90.a2m.gz # 1q5yA.t06-thin90.a2m with 73 sequences, total weight= 16.2731 avg weight= 0.222919 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q5yA/info/1q5yA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1q5yA/nostruct-align/1q5yA.t06-thin90.a2m.gz, have 44467 columns in 180 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r0rI/nostruct-align/1r0rI.t06-thin90.a2m.gz # 1r0rI.t06-thin90.a2m with 186 sequences, total weight= 26.1502 avg weight= 0.140592 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30035 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r0rI/info/1r0rI.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1r0rI/nostruct-align/1r0rI.t06-thin90.a2m.gz, have 44518 columns in 181 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w2yA/nostruct-align/1w2yA.t06-thin90.a2m.gz # 1w2yA.t06-thin90.a2m with 59 sequences, total weight= 50.768 avg weight= 0.860475 41 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w2yA/info/1w2yA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1w2yA/nostruct-align/1w2yA.t06-thin90.a2m.gz, have 44744 columns in 182 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e7wA/nostruct-align/1e7wA.t06-thin90.a2m.gz # 1e7wA.t06-thin90.a2m with 11445 sequences, total weight= 11445 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16967 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e7wA/info/1e7wA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1e7wA/nostruct-align/1e7wA.t06-thin90.a2m.gz, have 45011 columns in 183 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lopA/nostruct-align/1lopA.t06-thin90.a2m.gz # 1lopA.t06-thin90.a2m with 1400 sequences, total weight= 84.2775 avg weight= 0.0601982 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30467 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lopA/info/1lopA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1lopA/nostruct-align/1lopA.t06-thin90.a2m.gz, have 45175 columns in 184 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1ty9A/nostruct-align/1ty9A.t06-thin90.a2m.gz # 1ty9A.t06-thin90.a2m with 580 sequences, total weight= 580 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15587 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1ty9A/info/1ty9A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1ty9A/nostruct-align/1ty9A.t06-thin90.a2m.gz, have 45377 columns in 185 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t61A/nostruct-align/1t61A.t06-thin90.a2m.gz # 1t61A.t06-thin90.a2m with 67 sequences, total weight= 5.43812 avg weight= 0.0811659 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t61A/info/1t61A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1t61A/nostruct-align/1t61A.t06-thin90.a2m.gz, have 45600 columns in 186 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fj2A/nostruct-align/1fj2A.t06-thin90.a2m.gz # 1fj2A.t06-thin90.a2m with 13624 sequences, total weight= 13624 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.774461 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fj2A/info/1fj2A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1fj2A/nostruct-align/1fj2A.t06-thin90.a2m.gz, have 45829 columns in 187 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a8d/nostruct-align/1a8d.t06-thin90.a2m.gz # 1a8d.t06-thin90.a2m with 40 sequences, total weight= 28.8297 avg weight= 0.720743 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a8d/info/1a8d.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1a/1a8d/nostruct-align/1a8d.t06-thin90.a2m.gz, have 46281 columns in 188 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sxrA/nostruct-align/1sxrA.t06-thin90.a2m.gz # 1sxrA.t06-thin90.a2m with 505 sequences, total weight= 505 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18148 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sxrA/info/1sxrA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1sxrA/nostruct-align/1sxrA.t06-thin90.a2m.gz, have 46454 columns in 189 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kgdA/nostruct-align/1kgdA.t06-thin90.a2m.gz # 1kgdA.t06-thin90.a2m with 767 sequences, total weight= 767 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21578 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kgdA/info/1kgdA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kgdA/nostruct-align/1kgdA.t06-thin90.a2m.gz, have 46629 columns in 190 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1px5A/nostruct-align/1px5A.t06-thin90.a2m.gz # 1px5A.t06-thin90.a2m with 108 sequences, total weight= 34.3602 avg weight= 0.31815 43 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1px5A/info/1px5A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1px5A/nostruct-align/1px5A.t06-thin90.a2m.gz, have 46958 columns in 191 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1npk/nostruct-align/1npk.t06-thin90.a2m.gz # 1npk.t06-thin90.a2m with 566 sequences, total weight= 60.2087 avg weight= 0.106376 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30072 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1npk/info/1npk.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1npk/nostruct-align/1npk.t06-thin90.a2m.gz, have 47108 columns in 192 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sbyA/nostruct-align/1sbyA.t06-thin90.a2m.gz # 1sbyA.t06-thin90.a2m with 12885 sequences, total weight= 12885 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13232 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sbyA/info/1sbyA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1sbyA/nostruct-align/1sbyA.t06-thin90.a2m.gz, have 47362 columns in 193 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i1jA/nostruct-align/1i1jA.t06-thin90.a2m.gz # 1i1jA.t06-thin90.a2m with 26 sequences, total weight= 6.64854 avg weight= 0.255713 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i1jA/info/1i1jA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1i1jA/nostruct-align/1i1jA.t06-thin90.a2m.gz, have 47468 columns in 194 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t1vA/nostruct-align/1t1vA.t06-thin90.a2m.gz # 1t1vA.t06-thin90.a2m with 820 sequences, total weight= 256.69 avg weight= 0.313036 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31309 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t1vA/info/1t1vA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1t1vA/nostruct-align/1t1vA.t06-thin90.a2m.gz, have 47561 columns in 195 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j0pA/nostruct-align/1j0pA.t06-thin90.a2m.gz # 1j0pA.t06-thin90.a2m with 249 sequences, total weight= 249 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0319 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j0pA/info/1j0pA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1j0pA/nostruct-align/1j0pA.t06-thin90.a2m.gz, have 47669 columns in 196 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1llfA/nostruct-align/1llfA.t06-thin90.a2m.gz # 1llfA.t06-thin90.a2m with 2340 sequences, total weight= 2340 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02535 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1llfA/info/1llfA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1llfA/nostruct-align/1llfA.t06-thin90.a2m.gz, have 48203 columns in 197 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t2wA/nostruct-align/1t2wA.t06-thin90.a2m.gz # 1t2wA.t06-thin90.a2m with 243 sequences, total weight= 243 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29319 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t2wA/info/1t2wA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1t2wA/nostruct-align/1t2wA.t06-thin90.a2m.gz, have 48348 columns in 198 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yrcA/nostruct-align/1yrcA.t06-thin90.a2m.gz # 1yrcA.t06-thin90.a2m with 5644 sequences, total weight= 5644 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00122 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yrcA/info/1yrcA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1yrcA/nostruct-align/1yrcA.t06-thin90.a2m.gz, have 48753 columns in 199 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lniA/nostruct-align/1lniA.t06-thin90.a2m.gz # 1lniA.t06-thin90.a2m with 48 sequences, total weight= 12.7834 avg weight= 0.266321 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lniA/info/1lniA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1lniA/nostruct-align/1lniA.t06-thin90.a2m.gz, have 48849 columns in 200 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p5dX/nostruct-align/1p5dX.t06-thin90.a2m.gz # 1p5dX.t06-thin90.a2m with 1257 sequences, total weight= 1257 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28284 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p5dX/info/1p5dX.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1p5dX/nostruct-align/1p5dX.t06-thin90.a2m.gz, have 49304 columns in 201 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eu3A/nostruct-align/1eu3A.t06-thin90.a2m.gz # 1eu3A.t06-thin90.a2m with 107 sequences, total weight= 52.5247 avg weight= 0.490885 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eu3A/info/1eu3A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1eu3A/nostruct-align/1eu3A.t06-thin90.a2m.gz, have 49514 columns in 202 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kpf/nostruct-align/1kpf.t06-thin90.a2m.gz # 1kpf.t06-thin90.a2m with 845 sequences, total weight= 845 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28161 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kpf/info/1kpf.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kpf/nostruct-align/1kpf.t06-thin90.a2m.gz, have 49625 columns in 203 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m1fA/nostruct-align/1m1fA.t06-thin90.a2m.gz # 1m1fA.t06-thin90.a2m with 270 sequences, total weight= 195.909 avg weight= 0.725588 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30291 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m1fA/info/1m1fA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1m1fA/nostruct-align/1m1fA.t06-thin90.a2m.gz, have 49732 columns in 204 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qhoA/nostruct-align/1qhoA.t06-thin90.a2m.gz # 1qhoA.t06-thin90.a2m with 2395 sequences, total weight= 2395 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24246 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qhoA/info/1qhoA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qhoA/nostruct-align/1qhoA.t06-thin90.a2m.gz, have 50418 columns in 205 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yacA/nostruct-align/1yacA.t06-thin90.a2m.gz # 1yacA.t06-thin90.a2m with 1030 sequences, total weight= 1030 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13459 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yacA/info/1yacA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1yacA/nostruct-align/1yacA.t06-thin90.a2m.gz, have 50622 columns in 206 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p3cA/nostruct-align/1p3cA.t06-thin90.a2m.gz # 1p3cA.t06-thin90.a2m with 3827 sequences, total weight= 3827 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16122 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p3cA/info/1p3cA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1p3cA/nostruct-align/1p3cA.t06-thin90.a2m.gz, have 50837 columns in 207 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o7qA/nostruct-align/1o7qA.t06-thin90.a2m.gz # 1o7qA.t06-thin90.a2m with 69 sequences, total weight= 12.1434 avg weight= 0.175992 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o7qA/info/1o7qA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1o7qA/nostruct-align/1o7qA.t06-thin90.a2m.gz, have 51124 columns in 208 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mgqA/nostruct-align/1mgqA.t06-thin90.a2m.gz # 1mgqA.t06-thin90.a2m with 456 sequences, total weight= 103.093 avg weight= 0.226082 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3036 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mgqA/info/1mgqA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mgqA/nostruct-align/1mgqA.t06-thin90.a2m.gz, have 51198 columns in 209 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w3iA/nostruct-align/1w3iA.t06-thin90.a2m.gz # 1w3iA.t06-thin90.a2m with 914 sequences, total weight= 914 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25655 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w3iA/info/1w3iA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1w3iA/nostruct-align/1w3iA.t06-thin90.a2m.gz, have 51491 columns in 210 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uxzA/nostruct-align/1uxzA.t06-thin90.a2m.gz # 1uxzA.t06-thin90.a2m with 198 sequences, total weight= 144.676 avg weight= 0.730687 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30112 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uxzA/info/1uxzA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1uxzA/nostruct-align/1uxzA.t06-thin90.a2m.gz, have 51622 columns in 211 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ra0A/nostruct-align/1ra0A.t06-thin90.a2m.gz # 1ra0A.t06-thin90.a2m with 3112 sequences, total weight= 3112 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.880758 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ra0A/info/1ra0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1ra0A/nostruct-align/1ra0A.t06-thin90.a2m.gz, have 52045 columns in 212 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wm3A/nostruct-align/1wm3A.t06-thin90.a2m.gz # 1wm3A.t06-thin90.a2m with 79 sequences, total weight= 21.9291 avg weight= 0.277583 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wm3A/info/1wm3A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1wm3A/nostruct-align/1wm3A.t06-thin90.a2m.gz, have 52117 columns in 213 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r12A/nostruct-align/1r12A.t06-thin90.a2m.gz # 1r12A.t06-thin90.a2m with 31 sequences, total weight= 15.4523 avg weight= 0.49846 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r12A/info/1r12A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1r12A/nostruct-align/1r12A.t06-thin90.a2m.gz, have 52368 columns in 214 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1egwA/nostruct-align/1egwA.t06-thin90.a2m.gz # 1egwA.t06-thin90.a2m with 597 sequences, total weight= 15.7325 avg weight= 0.0263526 41 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1egwA/info/1egwA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1egwA/nostruct-align/1egwA.t06-thin90.a2m.gz, have 52439 columns in 215 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jmkC/nostruct-align/1jmkC.t06-thin90.a2m.gz # 1jmkC.t06-thin90.a2m with 2873 sequences, total weight= 2873 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.71897 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jmkC/info/1jmkC.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jmkC/nostruct-align/1jmkC.t06-thin90.a2m.gz, have 52661 columns in 216 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1duvG/nostruct-align/1duvG.t06-thin90.a2m.gz # 1duvG.t06-thin90.a2m with 816 sequences, total weight= 58.0108 avg weight= 0.0710917 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30102 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1duvG/info/1duvG.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1duvG/nostruct-align/1duvG.t06-thin90.a2m.gz, have 52994 columns in 217 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rocA/nostruct-align/1rocA.t06-thin90.a2m.gz # 1rocA.t06-thin90.a2m with 56 sequences, total weight= 10.661 avg weight= 0.190374 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rocA/info/1rocA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rocA/nostruct-align/1rocA.t06-thin90.a2m.gz, have 53149 columns in 218 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v70A/nostruct-align/1v70A.t06-thin90.a2m.gz # 1v70A.t06-thin90.a2m with 2453 sequences, total weight= 2453 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.929115 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v70A/info/1v70A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1v70A/nostruct-align/1v70A.t06-thin90.a2m.gz, have 53254 columns in 219 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i71A/nostruct-align/1i71A.t06-thin90.a2m.gz # 1i71A.t06-thin90.a2m with 359 sequences, total weight= 26.1333 avg weight= 0.0727948 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30033 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i71A/info/1i71A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1i71A/nostruct-align/1i71A.t06-thin90.a2m.gz, have 53337 columns in 220 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dqgA/nostruct-align/1dqgA.t06-thin90.a2m.gz # 1dqgA.t06-thin90.a2m with 48 sequences, total weight= 29.6443 avg weight= 0.61759 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dqgA/info/1dqgA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1dqgA/nostruct-align/1dqgA.t06-thin90.a2m.gz, have 53471 columns in 221 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pq7A/nostruct-align/1pq7A.t06-thin90.a2m.gz # 1pq7A.t06-thin90.a2m with 3302 sequences, total weight= 1540.49 avg weight= 0.466531 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32295 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pq7A/info/1pq7A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1pq7A/nostruct-align/1pq7A.t06-thin90.a2m.gz, have 53695 columns in 222 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l1lA/nostruct-align/1l1lA.t06-thin90.a2m.gz # 1l1lA.t06-thin90.a2m with 640 sequences, total weight= 640 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2429 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l1lA/info/1l1lA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1l1lA/nostruct-align/1l1lA.t06-thin90.a2m.gz, have 54412 columns in 223 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e2wA/nostruct-align/1e2wA.t06-thin90.a2m.gz # 1e2wA.t06-thin90.a2m with 65 sequences, total weight= 4.67728 avg weight= 0.0719582 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e2wA/info/1e2wA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1e2wA/nostruct-align/1e2wA.t06-thin90.a2m.gz, have 54663 columns in 224 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lam/nostruct-align/1lam.t06-thin90.a2m.gz # 1lam.t06-thin90.a2m with 538 sequences, total weight= 63.7628 avg weight= 0.118518 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30343 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lam/info/1lam.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1lam/nostruct-align/1lam.t06-thin90.a2m.gz, have 55147 columns in 225 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xx1A/nostruct-align/1xx1A.t06-thin90.a2m.gz # 1xx1A.t06-thin90.a2m with 214 sequences, total weight= 214 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.918976 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xx1A/info/1xx1A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xx1A/nostruct-align/1xx1A.t06-thin90.a2m.gz, have 55432 columns in 226 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1ltzA/nostruct-align/1ltzA.t06-thin90.a2m.gz # 1ltzA.t06-thin90.a2m with 163 sequences, total weight= 22.6206 avg weight= 0.138777 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1ltzA/info/1ltzA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1ltzA/nostruct-align/1ltzA.t06-thin90.a2m.gz, have 55706 columns in 227 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nar/nostruct-align/1nar.t06-thin90.a2m.gz # 1nar.t06-thin90.a2m with 1135 sequences, total weight= 1135 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07739 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nar/info/1nar.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nar/nostruct-align/1nar.t06-thin90.a2m.gz, have 55995 columns in 228 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xppA/nostruct-align/1xppA.t06-thin90.a2m.gz # 1xppA.t06-thin90.a2m with 5 sequences, total weight= 3.96946 avg weight= 0.793891 12 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xppA/info/1xppA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xppA/nostruct-align/1xppA.t06-thin90.a2m.gz, have 56094 columns in 229 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kyfA/nostruct-align/1kyfA.t06-thin90.a2m.gz # 1kyfA.t06-thin90.a2m with 83 sequences, total weight= 83 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01329 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kyfA/info/1kyfA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kyfA/nostruct-align/1kyfA.t06-thin90.a2m.gz, have 56341 columns in 230 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i40A/nostruct-align/1i40A.t06-thin90.a2m.gz # 1i40A.t06-thin90.a2m with 371 sequences, total weight= 37.5864 avg weight= 0.101311 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i40A/info/1i40A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1i40A/nostruct-align/1i40A.t06-thin90.a2m.gz, have 56516 columns in 231 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1io0A/nostruct-align/1io0A.t06-thin90.a2m.gz # 1io0A.t06-thin90.a2m with 538 sequences, total weight= 538 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19408 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1io0A/info/1io0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1io0A/nostruct-align/1io0A.t06-thin90.a2m.gz, have 56682 columns in 232 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/8a/8abp/nostruct-align/8abp.t06-thin90.a2m.gz # 8abp.t06-thin90.a2m with 382 sequences, total weight= 382 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.919122 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/8a/8abp/info/8abp.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/8a/8abp/nostruct-align/8abp.t06-thin90.a2m.gz, have 56987 columns in 233 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cjwA/nostruct-align/1cjwA.t06-thin90.a2m.gz # 1cjwA.t06-thin90.a2m with 8103 sequences, total weight= 8103 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.768065 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cjwA/info/1cjwA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1c/1cjwA/nostruct-align/1cjwA.t06-thin90.a2m.gz, have 57153 columns in 234 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bopA/nostruct-align/2bopA.t06-thin90.a2m.gz # 2bopA.t06-thin90.a2m with 117 sequences, total weight= 16.5313 avg weight= 0.141294 42 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bopA/info/2bopA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2b/2bopA/nostruct-align/2bopA.t06-thin90.a2m.gz, have 57238 columns in 235 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xzzA/nostruct-align/1xzzA.t06-thin90.a2m.gz # 1xzzA.t06-thin90.a2m with 93 sequences, total weight= 93 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24296 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xzzA/info/1xzzA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xzzA/nostruct-align/1xzzA.t06-thin90.a2m.gz, have 57454 columns in 236 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qmgA/nostruct-align/1qmgA.t06-thin90.a2m.gz # 1qmgA.t06-thin90.a2m with 3693 sequences, total weight= 3693 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05921 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qmgA/info/1qmgA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qmgA/nostruct-align/1qmgA.t06-thin90.a2m.gz, have 57968 columns in 237 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jovA/nostruct-align/1jovA.t06-thin90.a2m.gz # 1jovA.t06-thin90.a2m with 579 sequences, total weight= 579 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14589 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jovA/info/1jovA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jovA/nostruct-align/1jovA.t06-thin90.a2m.gz, have 58237 columns in 238 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1ws8A/nostruct-align/1ws8A.t06-thin90.a2m.gz # 1ws8A.t06-thin90.a2m with 162 sequences, total weight= 24.4018 avg weight= 0.150628 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1ws8A/info/1ws8A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1ws8A/nostruct-align/1ws8A.t06-thin90.a2m.gz, have 58341 columns in 239 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vmgA/nostruct-align/1vmgA.t06-thin90.a2m.gz # 1vmgA.t06-thin90.a2m with 174 sequences, total weight= 45.1919 avg weight= 0.259724 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30034 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vmgA/info/1vmgA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vmgA/nostruct-align/1vmgA.t06-thin90.a2m.gz, have 58424 columns in 240 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hqkA/nostruct-align/1hqkA.t06-thin90.a2m.gz # 1hqkA.t06-thin90.a2m with 368 sequences, total weight= 26.6285 avg weight= 0.0723601 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hqkA/info/1hqkA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1hqkA/nostruct-align/1hqkA.t06-thin90.a2m.gz, have 58578 columns in 241 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e85A/nostruct-align/1e85A.t06-thin90.a2m.gz # 1e85A.t06-thin90.a2m with 123 sequences, total weight= 123 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27545 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e85A/info/1e85A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1e85A/nostruct-align/1e85A.t06-thin90.a2m.gz, have 58703 columns in 242 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e6bA/nostruct-align/1e6bA.t06-thin90.a2m.gz # 1e6bA.t06-thin90.a2m with 3516 sequences, total weight= 3516 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02442 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e6bA/info/1e6bA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1e6bA/nostruct-align/1e6bA.t06-thin90.a2m.gz, have 58897 columns in 243 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t06-thin90.a2m.gz # 1nzyA.t06-thin90.a2m with 3042 sequences, total weight= 3042 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17745 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t06-thin90.a2m.gz, have 59166 columns in 244 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n93X/nostruct-align/1n93X.t06-thin90.a2m.gz # 1n93X.t06-thin90.a2m with 14 sequences, total weight= 6.84973 avg weight= 0.489266 15 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n93X/info/1n93X.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1n93X/nostruct-align/1n93X.t06-thin90.a2m.gz, have 59501 columns in 245 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qq5A/nostruct-align/1qq5A.t06-thin90.a2m.gz # 1qq5A.t06-thin90.a2m with 4366 sequences, total weight= 4366 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.803489 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qq5A/info/1qq5A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qq5A/nostruct-align/1qq5A.t06-thin90.a2m.gz, have 59746 columns in 246 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1si6X/nostruct-align/1si6X.t06-thin90.a2m.gz # 1si6X.t06-thin90.a2m with 885 sequences, total weight= 885 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.838621 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1si6X/info/1si6X.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1si6X/nostruct-align/1si6X.t06-thin90.a2m.gz, have 60026 columns in 247 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r5rA/nostruct-align/1r5rA.t06-thin90.a2m.gz # 1r5rA.t06-thin90.a2m with 307 sequences, total weight= 307 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.93407 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r5rA/info/1r5rA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1r5rA/nostruct-align/1r5rA.t06-thin90.a2m.gz, have 60143 columns in 248 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ow1A/nostruct-align/1ow1A.t06-thin90.a2m.gz # 1ow1A.t06-thin90.a2m with 33 sequences, total weight= 10.8545 avg weight= 0.328924 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ow1A/info/1ow1A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1ow1A/nostruct-align/1ow1A.t06-thin90.a2m.gz, have 60310 columns in 249 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iirA/nostruct-align/1iirA.t06-thin90.a2m.gz # 1iirA.t06-thin90.a2m with 4632 sequences, total weight= 4632 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.81482 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iirA/info/1iirA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1iirA/nostruct-align/1iirA.t06-thin90.a2m.gz, have 60692 columns in 250 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vggA/nostruct-align/1vggA.t06-thin90.a2m.gz # 1vggA.t06-thin90.a2m with 36 sequences, total weight= 4.51079 avg weight= 0.1253 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vggA/info/1vggA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vggA/nostruct-align/1vggA.t06-thin90.a2m.gz, have 60853 columns in 251 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oc7A/nostruct-align/1oc7A.t06-thin90.a2m.gz # 1oc7A.t06-thin90.a2m with 90 sequences, total weight= 23.4602 avg weight= 0.260669 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oc7A/info/1oc7A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1oc7A/nostruct-align/1oc7A.t06-thin90.a2m.gz, have 61217 columns in 252 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wkrA/nostruct-align/1wkrA.t06-thin90.a2m.gz # 1wkrA.t06-thin90.a2m with 1115 sequences, total weight= 1115 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15558 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wkrA/info/1wkrA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1wkrA/nostruct-align/1wkrA.t06-thin90.a2m.gz, have 61557 columns in 253 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v4vA/nostruct-align/1v4vA.t06-thin90.a2m.gz # 1v4vA.t06-thin90.a2m with 8152 sequences, total weight= 8152 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.724862 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v4vA/info/1v4vA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1v4vA/nostruct-align/1v4vA.t06-thin90.a2m.gz, have 61930 columns in 254 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wy2A/nostruct-align/1wy2A.t06-thin90.a2m.gz # 1wy2A.t06-thin90.a2m with 1828 sequences, total weight= 1828 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11753 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wy2A/info/1wy2A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1wy2A/nostruct-align/1wy2A.t06-thin90.a2m.gz, have 62281 columns in 255 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tt8A/nostruct-align/1tt8A.t06-thin90.a2m.gz # 1tt8A.t06-thin90.a2m with 146 sequences, total weight= 146 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19019 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tt8A/info/1tt8A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1tt8A/nostruct-align/1tt8A.t06-thin90.a2m.gz, have 62445 columns in 256 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qsgA/nostruct-align/1qsgA.t06-thin90.a2m.gz # 1qsgA.t06-thin90.a2m with 11771 sequences, total weight= 11771 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18162 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qsgA/info/1qsgA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qsgA/nostruct-align/1qsgA.t06-thin90.a2m.gz, have 62703 columns in 257 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1aquA/nostruct-align/1aquA.t06-thin90.a2m.gz # 1aquA.t06-thin90.a2m with 1097 sequences, total weight= 1097 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.899158 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1aquA/info/1aquA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1a/1aquA/nostruct-align/1aquA.t06-thin90.a2m.gz, have 62984 columns in 258 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1llnA/nostruct-align/1llnA.t06-thin90.a2m.gz # 1llnA.t06-thin90.a2m with 149 sequences, total weight= 149 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17979 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1llnA/info/1llnA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1llnA/nostruct-align/1llnA.t06-thin90.a2m.gz, have 63246 columns in 259 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hdoA/nostruct-align/1hdoA.t06-thin90.a2m.gz # 1hdoA.t06-thin90.a2m with 16519 sequences, total weight= 16519 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.975963 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hdoA/info/1hdoA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1hdoA/nostruct-align/1hdoA.t06-thin90.a2m.gz, have 63451 columns in 260 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c1dA/nostruct-align/1c1dA.t06-thin90.a2m.gz # 1c1dA.t06-thin90.a2m with 1157 sequences, total weight= 1157 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2135 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c1dA/info/1c1dA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1c/1c1dA/nostruct-align/1c1dA.t06-thin90.a2m.gz, have 63800 columns in 261 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vk5A/nostruct-align/1vk5A.t06-thin90.a2m.gz # 1vk5A.t06-thin90.a2m with 5 sequences, total weight= 2.48423 avg weight= 0.496845 9 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vk5A/info/1vk5A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vk5A/nostruct-align/1vk5A.t06-thin90.a2m.gz, have 63921 columns in 262 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ie9A/nostruct-align/1ie9A.t06-thin90.a2m.gz # 1ie9A.t06-thin90.a2m with 1239 sequences, total weight= 1239 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.934228 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ie9A/info/1ie9A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1ie9A/nostruct-align/1ie9A.t06-thin90.a2m.gz, have 64176 columns in 263 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1ay7B/nostruct-align/1ay7B.t06-thin90.a2m.gz # 1ay7B.t06-thin90.a2m with 56 sequences, total weight= 54.7676 avg weight= 0.977993 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1ay7B/info/1ay7B.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1a/1ay7B/nostruct-align/1ay7B.t06-thin90.a2m.gz, have 64265 columns in 264 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cruA/nostruct-align/1cruA.t06-thin90.a2m.gz # 1cruA.t06-thin90.a2m with 1786 sequences, total weight= 1786 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.960438 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cruA/info/1cruA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1c/1cruA/nostruct-align/1cruA.t06-thin90.a2m.gz, have 64713 columns in 265 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1moq/nostruct-align/1moq.t06-thin90.a2m.gz # 1moq.t06-thin90.a2m with 1323 sequences, total weight= 1323 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15897 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1moq/info/1moq.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1moq/nostruct-align/1moq.t06-thin90.a2m.gz, have 65079 columns in 266 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iomA/nostruct-align/1iomA.t06-thin90.a2m.gz # 1iomA.t06-thin90.a2m with 620 sequences, total weight= 95.4854 avg weight= 0.154009 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30348 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iomA/info/1iomA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1iomA/nostruct-align/1iomA.t06-thin90.a2m.gz, have 65453 columns in 267 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q92A/nostruct-align/1q92A.t06-thin90.a2m.gz # 1q92A.t06-thin90.a2m with 3430 sequences, total weight= 3430 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.880224 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q92A/info/1q92A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1q92A/nostruct-align/1q92A.t06-thin90.a2m.gz, have 65648 columns in 268 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xm3A/nostruct-align/1xm3A.t06-thin90.a2m.gz # 1xm3A.t06-thin90.a2m with 534 sequences, total weight= 534 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28984 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xm3A/info/1xm3A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xm3A/nostruct-align/1xm3A.t06-thin90.a2m.gz, have 65892 columns in 269 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1ja9A/nostruct-align/1ja9A.t06-thin90.a2m.gz # 1ja9A.t06-thin90.a2m with 12275 sequences, total weight= 12275 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18462 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1ja9A/info/1ja9A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1ja9A/nostruct-align/1ja9A.t06-thin90.a2m.gz, have 66151 columns in 270 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x9dA/nostruct-align/1x9dA.t06-thin90.a2m.gz # 1x9dA.t06-thin90.a2m with 236 sequences, total weight= 35.2909 avg weight= 0.149538 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x9dA/info/1x9dA.stride-mixed.n_notor WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1x/1x9dA/nostruct-align/1x9dA.t06-thin90.a2m.gz, have 66602 columns in 271 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v2bA/nostruct-align/1v2bA.t06-thin90.a2m.gz # 1v2bA.t06-thin90.a2m with 70 sequences, total weight= 39.3801 avg weight= 0.562573 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v2bA/info/1v2bA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1v2bA/nostruct-align/1v2bA.t06-thin90.a2m.gz, have 66750 columns in 272 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gp6A/nostruct-align/1gp6A.t06-thin90.a2m.gz # 1gp6A.t06-thin90.a2m with 997 sequences, total weight= 997 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21057 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gp6A/info/1gp6A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gp6A/nostruct-align/1gp6A.t06-thin90.a2m.gz, have 67099 columns in 273 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gtvA/nostruct-align/1gtvA.t06-thin90.a2m.gz # 1gtvA.t06-thin90.a2m with 3665 sequences, total weight= 3665 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.858071 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gtvA/info/1gtvA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gtvA/nostruct-align/1gtvA.t06-thin90.a2m.gz, have 67307 columns in 274 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bqcA/nostruct-align/1bqcA.t06-thin90.a2m.gz # 1bqcA.t06-thin90.a2m with 2864 sequences, total weight= 2864 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.805999 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bqcA/info/1bqcA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1b/1bqcA/nostruct-align/1bqcA.t06-thin90.a2m.gz, have 67609 columns in 275 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nwzA/nostruct-align/1nwzA.t06-thin90.a2m.gz # 1nwzA.t06-thin90.a2m with 13 sequences, total weight= 6.09517 avg weight= 0.468859 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nwzA/info/1nwzA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nwzA/nostruct-align/1nwzA.t06-thin90.a2m.gz, have 67734 columns in 276 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wmqA/nostruct-align/1wmqA.t06-thin90.a2m.gz # 1wmqA.t06-thin90.a2m with 21 sequences, total weight= 9.24472 avg weight= 0.440225 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wmqA/info/1wmqA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1wmqA/nostruct-align/1wmqA.t06-thin90.a2m.gz, have 67877 columns in 277 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pinA/nostruct-align/1pinA.t06-thin90.a2m.gz # 1pinA.t06-thin90.a2m with 892 sequences, total weight= 892 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19262 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pinA/info/1pinA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1pinA/nostruct-align/1pinA.t06-thin90.a2m.gz, have 68030 columns in 278 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jlvA/nostruct-align/1jlvA.t06-thin90.a2m.gz # 1jlvA.t06-thin90.a2m with 3506 sequences, total weight= 3506 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.996553 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jlvA/info/1jlvA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jlvA/nostruct-align/1jlvA.t06-thin90.a2m.gz, have 68237 columns in 279 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kcqA/nostruct-align/1kcqA.t06-thin90.a2m.gz # 1kcqA.t06-thin90.a2m with 752 sequences, total weight= 752 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09329 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kcqA/info/1kcqA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kcqA/nostruct-align/1kcqA.t06-thin90.a2m.gz, have 68340 columns in 280 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qh5A/nostruct-align/1qh5A.t06-thin90.a2m.gz # 1qh5A.t06-thin90.a2m with 4396 sequences, total weight= 4396 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.880279 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qh5A/info/1qh5A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qh5A/nostruct-align/1qh5A.t06-thin90.a2m.gz, have 68600 columns in 281 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v0wA/nostruct-align/1v0wA.t06-thin90.a2m.gz # 1v0wA.t06-thin90.a2m with 1237 sequences, total weight= 1237 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.862612 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v0wA/info/1v0wA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1v0wA/nostruct-align/1v0wA.t06-thin90.a2m.gz, have 69096 columns in 282 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2ilk/nostruct-align/2ilk.t06-thin90.a2m.gz # 2ilk.t06-thin90.a2m with 89 sequences, total weight= 44.9199 avg weight= 0.504718 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2ilk/info/2ilk.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2i/2ilk/nostruct-align/2ilk.t06-thin90.a2m.gz, have 69251 columns in 283 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h2eA/nostruct-align/1h2eA.t06-thin90.a2m.gz # 1h2eA.t06-thin90.a2m with 1832 sequences, total weight= 1832 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05817 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h2eA/info/1h2eA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1h2eA/nostruct-align/1h2eA.t06-thin90.a2m.gz, have 69458 columns in 284 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r5yA/nostruct-align/1r5yA.t06-thin90.a2m.gz # 1r5yA.t06-thin90.a2m with 435 sequences, total weight= 89.4866 avg weight= 0.205716 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30152 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r5yA/info/1r5yA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1r5yA/nostruct-align/1r5yA.t06-thin90.a2m.gz, have 69819 columns in 285 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n13B/nostruct-align/1n13B.t06-thin90.a2m.gz # 1n13B.t06-thin90.a2m with 35 sequences, total weight= 19.7411 avg weight= 0.56403 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n13B/info/1n13B.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1n13B/nostruct-align/1n13B.t06-thin90.a2m.gz, have 69931 columns in 286 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qusA/nostruct-align/1qusA.t06-thin90.a2m.gz # 1qusA.t06-thin90.a2m with 366 sequences, total weight= 137.678 avg weight= 0.37617 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30326 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qusA/info/1qusA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qusA/nostruct-align/1qusA.t06-thin90.a2m.gz, have 70243 columns in 287 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mc2A/nostruct-align/1mc2A.t06-thin90.a2m.gz # 1mc2A.t06-thin90.a2m with 330 sequences, total weight= 28.6557 avg weight= 0.0868356 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mc2A/info/1mc2A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mc2A/nostruct-align/1mc2A.t06-thin90.a2m.gz, have 70365 columns in 288 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vsrA/nostruct-align/1vsrA.t06-thin90.a2m.gz # 1vsrA.t06-thin90.a2m with 80 sequences, total weight= 16.8717 avg weight= 0.210896 42 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vsrA/info/1vsrA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vsrA/nostruct-align/1vsrA.t06-thin90.a2m.gz, have 70499 columns in 289 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ooeA/nostruct-align/1ooeA.t06-thin90.a2m.gz # 1ooeA.t06-thin90.a2m with 11929 sequences, total weight= 11929 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16288 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ooeA/info/1ooeA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1ooeA/nostruct-align/1ooeA.t06-thin90.a2m.gz, have 70734 columns in 290 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1flmA/nostruct-align/1flmA.t06-thin90.a2m.gz # 1flmA.t06-thin90.a2m with 97 sequences, total weight= 97 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20358 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1flmA/info/1flmA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1flmA/nostruct-align/1flmA.t06-thin90.a2m.gz, have 70856 columns in 291 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xg5A/nostruct-align/1xg5A.t06-thin90.a2m.gz # 1xg5A.t06-thin90.a2m with 13170 sequences, total weight= 13170 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12643 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xg5A/info/1xg5A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xg5A/nostruct-align/1xg5A.t06-thin90.a2m.gz, have 71110 columns in 292 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gci/nostruct-align/1gci.t06-thin90.a2m.gz # 1gci.t06-thin90.a2m with 1712 sequences, total weight= 1712 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22302 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gci/info/1gci.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gci/nostruct-align/1gci.t06-thin90.a2m.gz, have 71379 columns in 293 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vm0A/nostruct-align/1vm0A.t06-thin90.a2m.gz # 1vm0A.t06-thin90.a2m with 38 sequences, total weight= 15.7823 avg weight= 0.415324 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vm0A/info/1vm0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vm0A/nostruct-align/1vm0A.t06-thin90.a2m.gz, have 71472 columns in 294 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1usgA/nostruct-align/1usgA.t06-thin90.a2m.gz # 1usgA.t06-thin90.a2m with 2421 sequences, total weight= 2421 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.861132 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1usgA/info/1usgA.stride-mixed.n_notor WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1u/1usgA/nostruct-align/1usgA.t06-thin90.a2m.gz, have 71817 columns in 295 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1unqA/nostruct-align/1unqA.t06-thin90.a2m.gz # 1unqA.t06-thin90.a2m with 1897 sequences, total weight= 1897 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.910851 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1unqA/info/1unqA.stride-mixed.n_notor WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1u/1unqA/nostruct-align/1unqA.t06-thin90.a2m.gz, have 71934 columns in 296 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m1nA/nostruct-align/1m1nA.t06-thin90.a2m.gz # 1m1nA.t06-thin90.a2m with 687 sequences, total weight= 687 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22038 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m1nA/info/1m1nA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1m1nA/nostruct-align/1m1nA.t06-thin90.a2m.gz, have 72411 columns in 297 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1se8A/nostruct-align/1se8A.t06-thin90.a2m.gz # 1se8A.t06-thin90.a2m with 431 sequences, total weight= 100.119 avg weight= 0.232295 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1se8A/info/1se8A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1se8A/nostruct-align/1se8A.t06-thin90.a2m.gz, have 72624 columns in 298 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pot/nostruct-align/1pot.t06-thin90.a2m.gz # 1pot.t06-thin90.a2m with 2760 sequences, total weight= 2760 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.869508 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pot/info/1pot.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1pot/nostruct-align/1pot.t06-thin90.a2m.gz, have 72946 columns in 299 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w6sB/nostruct-align/1w6sB.t06-thin90.a2m.gz # 1w6sB.t06-thin90.a2m with 12 sequences, total weight= 3.2008 avg weight= 0.266733 15 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w6sB/info/1w6sB.stride-mixed.n_notor WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1w/1w6sB/nostruct-align/1w6sB.t06-thin90.a2m.gz, have 73018 columns in 300 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wlgA/nostruct-align/1wlgA.t06-thin90.a2m.gz # 1wlgA.t06-thin90.a2m with 534 sequences, total weight= 161.999 avg weight= 0.303368 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30659 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wlgA/info/1wlgA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1wlgA/nostruct-align/1wlgA.t06-thin90.a2m.gz, have 73311 columns in 301 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r6jA/nostruct-align/1r6jA.t06-thin90.a2m.gz # 1r6jA.t06-thin90.a2m with 817 sequences, total weight= 144.317 avg weight= 0.176643 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.319 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r6jA/info/1r6jA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1r6jA/nostruct-align/1r6jA.t06-thin90.a2m.gz, have 73393 columns in 302 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iqcA/nostruct-align/1iqcA.t06-thin90.a2m.gz # 1iqcA.t06-thin90.a2m with 532 sequences, total weight= 532 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08583 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iqcA/info/1iqcA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1iqcA/nostruct-align/1iqcA.t06-thin90.a2m.gz, have 73701 columns in 303 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p9aG/nostruct-align/1p9aG.t06-thin90.a2m.gz # 1p9aG.t06-thin90.a2m with 9330 sequences, total weight= 9330 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.966774 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p9aG/info/1p9aG.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1p9aG/nostruct-align/1p9aG.t06-thin90.a2m.gz, have 73967 columns in 304 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1z57A/nostruct-align/1z57A.t06-thin90.a2m.gz # 1z57A.t06-thin90.a2m with 12796 sequences, total weight= 12796 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03097 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1z57A/info/1z57A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1z/1z57A/nostruct-align/1z57A.t06-thin90.a2m.gz, have 74300 columns in 305 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yg9A/nostruct-align/1yg9A.t06-thin90.a2m.gz # 1yg9A.t06-thin90.a2m with 1149 sequences, total weight= 1149 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16293 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yg9A/info/1yg9A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1yg9A/nostruct-align/1yg9A.t06-thin90.a2m.gz, have 74630 columns in 306 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oewA/nostruct-align/1oewA.t06-thin90.a2m.gz # 1oewA.t06-thin90.a2m with 1107 sequences, total weight= 1107 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18503 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oewA/info/1oewA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1oewA/nostruct-align/1oewA.t06-thin90.a2m.gz, have 74958 columns in 307 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hz4A/nostruct-align/1hz4A.t06-thin90.a2m.gz # 1hz4A.t06-thin90.a2m with 21 sequences, total weight= 10.2762 avg weight= 0.489341 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hz4A/info/1hz4A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1hz4A/nostruct-align/1hz4A.t06-thin90.a2m.gz, have 75324 columns in 308 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wer/nostruct-align/1wer.t06-thin90.a2m.gz # 1wer.t06-thin90.a2m with 285 sequences, total weight= 285 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03754 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wer/info/1wer.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1wer/nostruct-align/1wer.t06-thin90.a2m.gz, have 75648 columns in 309 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1ne9A/nostruct-align/1ne9A.t06-thin90.a2m.gz # 1ne9A.t06-thin90.a2m with 591 sequences, total weight= 591 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.877007 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1ne9A/info/1ne9A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1ne9A/nostruct-align/1ne9A.t06-thin90.a2m.gz, have 75983 columns in 310 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qe3A/nostruct-align/1qe3A.t06-thin90.a2m.gz # 1qe3A.t06-thin90.a2m with 2399 sequences, total weight= 2399 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05871 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qe3A/info/1qe3A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qe3A/nostruct-align/1qe3A.t06-thin90.a2m.gz, have 76450 columns in 311 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qnaA/nostruct-align/1qnaA.t06-thin90.a2m.gz # 1qnaA.t06-thin90.a2m with 136 sequences, total weight= 29.6051 avg weight= 0.217685 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qnaA/info/1qnaA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qnaA/nostruct-align/1qnaA.t06-thin90.a2m.gz, have 76632 columns in 312 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wouA/nostruct-align/1wouA.t06-thin90.a2m.gz # 1wouA.t06-thin90.a2m with 3028 sequences, total weight= 3028 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11675 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wouA/info/1wouA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1wouA/nostruct-align/1wouA.t06-thin90.a2m.gz, have 76751 columns in 313 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rp0A/nostruct-align/1rp0A.t06-thin90.a2m.gz # 1rp0A.t06-thin90.a2m with 10754 sequences, total weight= 10754 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.841987 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rp0A/info/1rp0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rp0A/nostruct-align/1rp0A.t06-thin90.a2m.gz, have 77029 columns in 314 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3p/3proC/nostruct-align/3proC.t06-thin90.a2m.gz # 3proC.t06-thin90.a2m with 25 sequences, total weight= 16.7636 avg weight= 0.670543 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3p/3proC/info/3proC.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/3p/3proC/nostruct-align/3proC.t06-thin90.a2m.gz, have 77179 columns in 315 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ukfA/nostruct-align/1ukfA.t06-thin90.a2m.gz # 1ukfA.t06-thin90.a2m with 27 sequences, total weight= 27 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05769 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ukfA/info/1ukfA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1ukfA/nostruct-align/1ukfA.t06-thin90.a2m.gz, have 77367 columns in 316 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v7rA/nostruct-align/1v7rA.t06-thin90.a2m.gz # 1v7rA.t06-thin90.a2m with 427 sequences, total weight= 32.8606 avg weight= 0.0769569 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v7rA/info/1v7rA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1v7rA/nostruct-align/1v7rA.t06-thin90.a2m.gz, have 77553 columns in 317 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nz0A/nostruct-align/1nz0A.t06-thin90.a2m.gz # 1nz0A.t06-thin90.a2m with 324 sequences, total weight= 208.937 avg weight= 0.644868 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30492 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nz0A/info/1nz0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nz0A/nostruct-align/1nz0A.t06-thin90.a2m.gz, have 77662 columns in 318 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p4oA/nostruct-align/1p4oA.t06-thin90.a2m.gz # 1p4oA.t06-thin90.a2m with 13325 sequences, total weight= 13325 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04274 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p4oA/info/1p4oA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1p4oA/nostruct-align/1p4oA.t06-thin90.a2m.gz, have 77970 columns in 319 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1ajsA/nostruct-align/1ajsA.t06-thin90.a2m.gz # 1ajsA.t06-thin90.a2m with 6925 sequences, total weight= 6925 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.909958 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1ajsA/info/1ajsA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1a/1ajsA/nostruct-align/1ajsA.t06-thin90.a2m.gz, have 78382 columns in 320 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c3cA/nostruct-align/1c3cA.t06-thin90.a2m.gz # 1c3cA.t06-thin90.a2m with 1310 sequences, total weight= 647.489 avg weight= 0.494266 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31615 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c3cA/info/1c3cA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1c/1c3cA/nostruct-align/1c3cA.t06-thin90.a2m.gz, have 78806 columns in 321 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mzbA/nostruct-align/1mzbA.t06-thin90.a2m.gz # 1mzbA.t06-thin90.a2m with 719 sequences, total weight= 719 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28275 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mzbA/info/1mzbA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mzbA/nostruct-align/1mzbA.t06-thin90.a2m.gz, have 78939 columns in 322 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wvgA/nostruct-align/1wvgA.t06-thin90.a2m.gz # 1wvgA.t06-thin90.a2m with 14760 sequences, total weight= 14760 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.880178 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wvgA/info/1wvgA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1wvgA/nostruct-align/1wvgA.t06-thin90.a2m.gz, have 79291 columns in 323 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xq6A/nostruct-align/1xq6A.t06-thin90.a2m.gz # 1xq6A.t06-thin90.a2m with 16778 sequences, total weight= 16778 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.925834 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xq6A/info/1xq6A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xq6A/nostruct-align/1xq6A.t06-thin90.a2m.gz, have 79544 columns in 324 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b6a/nostruct-align/1b6a.t06-thin90.a2m.gz # 1b6a.t06-thin90.a2m with 1625 sequences, total weight= 167.149 avg weight= 0.102861 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30498 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b6a/info/1b6a.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1b/1b6a/nostruct-align/1b6a.t06-thin90.a2m.gz, have 79899 columns in 325 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x8gA/nostruct-align/1x8gA.t06-thin90.a2m.gz # 1x8gA.t06-thin90.a2m with 4483 sequences, total weight= 4483 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.838648 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x8gA/info/1x8gA.stride-mixed.n_notor WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1x/1x8gA/nostruct-align/1x8gA.t06-thin90.a2m.gz, have 80123 columns in 326 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c1kA/nostruct-align/1c1kA.t06-thin90.a2m.gz # 1c1kA.t06-thin90.a2m with 13 sequences, total weight= 7.00569 avg weight= 0.538899 19 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c1kA/info/1c1kA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1c/1c1kA/nostruct-align/1c1kA.t06-thin90.a2m.gz, have 80340 columns in 327 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3v/3vub/nostruct-align/3vub.t06-thin90.a2m.gz # 3vub.t06-thin90.a2m with 30 sequences, total weight= 13.4549 avg weight= 0.448496 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3v/3vub/info/3vub.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/3v/3vub/nostruct-align/3vub.t06-thin90.a2m.gz, have 80441 columns in 328 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2baa/nostruct-align/2baa.t06-thin90.a2m.gz # 2baa.t06-thin90.a2m with 339 sequences, total weight= 110.526 avg weight= 0.326036 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30081 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2baa/info/2baa.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2b/2baa/nostruct-align/2baa.t06-thin90.a2m.gz, have 80684 columns in 329 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xsqA/nostruct-align/1xsqA.t06-thin90.a2m.gz # 1xsqA.t06-thin90.a2m with 103 sequences, total weight= 38.0251 avg weight= 0.369176 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xsqA/info/1xsqA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xsqA/nostruct-align/1xsqA.t06-thin90.a2m.gz, have 80838 columns in 330 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oruA/nostruct-align/1oruA.t06-thin90.a2m.gz # 1oruA.t06-thin90.a2m with 282 sequences, total weight= 282 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22529 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oruA/info/1oruA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1oruA/nostruct-align/1oruA.t06-thin90.a2m.gz, have 81020 columns in 331 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cqxA/nostruct-align/1cqxA.t06-thin90.a2m.gz # 1cqxA.t06-thin90.a2m with 2483 sequences, total weight= 2483 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00234 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cqxA/info/1cqxA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1c/1cqxA/nostruct-align/1cqxA.t06-thin90.a2m.gz, have 81423 columns in 332 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1txlA/nostruct-align/1txlA.t06-thin90.a2m.gz # 1txlA.t06-thin90.a2m with 37 sequences, total weight= 10.3108 avg weight= 0.27867 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1txlA/info/1txlA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1txlA/nostruct-align/1txlA.t06-thin90.a2m.gz, have 81611 columns in 333 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ud9A/nostruct-align/1ud9A.t06-thin90.a2m.gz # 1ud9A.t06-thin90.a2m with 231 sequences, total weight= 231 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13346 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ud9A/info/1ud9A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1ud9A/nostruct-align/1ud9A.t06-thin90.a2m.gz, have 81853 columns in 334 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t82A/nostruct-align/1t82A.t06-thin90.a2m.gz # 1t82A.t06-thin90.a2m with 1073 sequences, total weight= 1073 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.048 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t82A/info/1t82A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1t82A/nostruct-align/1t82A.t06-thin90.a2m.gz, have 81996 columns in 335 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m1qA/nostruct-align/1m1qA.t06-thin90.a2m.gz # 1m1qA.t06-thin90.a2m with 165 sequences, total weight= 165 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1586 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m1qA/info/1m1qA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1m1qA/nostruct-align/1m1qA.t06-thin90.a2m.gz, have 82086 columns in 336 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nnxA/nostruct-align/1nnxA.t06-thin90.a2m.gz # 1nnxA.t06-thin90.a2m with 58 sequences, total weight= 17.7408 avg weight= 0.305876 37 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nnxA/info/1nnxA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nnxA/nostruct-align/1nnxA.t06-thin90.a2m.gz, have 82179 columns in 337 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fm0D/nostruct-align/1fm0D.t06-thin90.a2m.gz # 1fm0D.t06-thin90.a2m with 341 sequences, total weight= 60.9201 avg weight= 0.178651 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30279 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fm0D/info/1fm0D.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1fm0D/nostruct-align/1fm0D.t06-thin90.a2m.gz, have 82260 columns in 338 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v7wA/nostruct-align/1v7wA.t06-thin90.a2m.gz # 1v7wA.t06-thin90.a2m with 1350 sequences, total weight= 1350 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.79412 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v7wA/info/1v7wA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1v7wA/nostruct-align/1v7wA.t06-thin90.a2m.gz, have 83039 columns in 339 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hd2A/nostruct-align/1hd2A.t06-thin90.a2m.gz # 1hd2A.t06-thin90.a2m with 2166 sequences, total weight= 2166 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20725 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hd2A/info/1hd2A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1hd2A/nostruct-align/1hd2A.t06-thin90.a2m.gz, have 83200 columns in 340 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pa1A/nostruct-align/1pa1A.t06-thin90.a2m.gz # 1pa1A.t06-thin90.a2m with 1120 sequences, total weight= 1120 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23399 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pa1A/info/1pa1A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1pa1A/nostruct-align/1pa1A.t06-thin90.a2m.gz, have 83502 columns in 341 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1euwA/nostruct-align/1euwA.t06-thin90.a2m.gz # 1euwA.t06-thin90.a2m with 702 sequences, total weight= 702 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29099 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1euwA/info/1euwA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1euwA/nostruct-align/1euwA.t06-thin90.a2m.gz, have 83638 columns in 342 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1ah7/nostruct-align/1ah7.t06-thin90.a2m.gz # 1ah7.t06-thin90.a2m with 150 sequences, total weight= 150 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04957 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1ah7/info/1ah7.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1a/1ah7/nostruct-align/1ah7.t06-thin90.a2m.gz, have 83883 columns in 343 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f6bA/nostruct-align/1f6bA.t06-thin90.a2m.gz # 1f6bA.t06-thin90.a2m with 7037 sequences, total weight= 7037 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02557 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f6bA/info/1f6bA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1f6bA/nostruct-align/1f6bA.t06-thin90.a2m.gz, have 84059 columns in 344 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vqsA/nostruct-align/1vqsA.t06-thin90.a2m.gz # 1vqsA.t06-thin90.a2m with 181 sequences, total weight= 181 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17787 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vqsA/info/1vqsA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vqsA/nostruct-align/1vqsA.t06-thin90.a2m.gz, have 84169 columns in 345 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qksA/nostruct-align/1qksA.t06-thin90.a2m.gz # 1qksA.t06-thin90.a2m with 449 sequences, total weight= 341.445 avg weight= 0.760457 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3007 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qksA/info/1qksA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qksA/nostruct-align/1qksA.t06-thin90.a2m.gz, have 84728 columns in 346 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h6fA/nostruct-align/1h6fA.t06-thin90.a2m.gz # 1h6fA.t06-thin90.a2m with 250 sequences, total weight= 35.209 avg weight= 0.140836 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h6fA/info/1h6fA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1h6fA/nostruct-align/1h6fA.t06-thin90.a2m.gz, have 84912 columns in 347 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q7lA/nostruct-align/1q7lA.t06-thin90.a2m.gz # 1q7lA.t06-thin90.a2m with 2033 sequences, total weight= 2033 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10642 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q7lA/info/1q7lA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1q7lA/nostruct-align/1q7lA.t06-thin90.a2m.gz, have 85104 columns in 348 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1te2A/nostruct-align/1te2A.t06-thin90.a2m.gz # 1te2A.t06-thin90.a2m with 4398 sequences, total weight= 4398 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.882451 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1te2A/info/1te2A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1te2A/nostruct-align/1te2A.t06-thin90.a2m.gz, have 85322 columns in 349 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q0pA/nostruct-align/1q0pA.t06-thin90.a2m.gz # 1q0pA.t06-thin90.a2m with 2083 sequences, total weight= 2083 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.957817 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q0pA/info/1q0pA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1q0pA/nostruct-align/1q0pA.t06-thin90.a2m.gz, have 85514 columns in 350 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xe0A/nostruct-align/1xe0A.t06-thin90.a2m.gz # 1xe0A.t06-thin90.a2m with 55 sequences, total weight= 12.5546 avg weight= 0.228265 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xe0A/info/1xe0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xe0A/nostruct-align/1xe0A.t06-thin90.a2m.gz, have 85622 columns in 351 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vziA/nostruct-align/1vziA.t06-thin90.a2m.gz # 1vziA.t06-thin90.a2m with 55 sequences, total weight= 18.4018 avg weight= 0.334579 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vziA/info/1vziA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vziA/nostruct-align/1vziA.t06-thin90.a2m.gz, have 85747 columns in 352 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vybA/nostruct-align/1vybA.t06-thin90.a2m.gz # 1vybA.t06-thin90.a2m with 2319 sequences, total weight= 2319 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.845286 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vybA/info/1vybA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vybA/nostruct-align/1vybA.t06-thin90.a2m.gz, have 85983 columns in 353 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uptB/nostruct-align/1uptB.t06-thin90.a2m.gz # 1uptB.t06-thin90.a2m with 13 sequences, total weight= 6.11458 avg weight= 0.470353 19 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uptB/info/1uptB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1uptB/nostruct-align/1uptB.t06-thin90.a2m.gz, have 86041 columns in 354 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o4vA/nostruct-align/1o4vA.t06-thin90.a2m.gz # 1o4vA.t06-thin90.a2m with 415 sequences, total weight= 21.1851 avg weight= 0.0510484 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o4vA/info/1o4vA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1o4vA/nostruct-align/1o4vA.t06-thin90.a2m.gz, have 86210 columns in 355 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gq8A/nostruct-align/1gq8A.t06-thin90.a2m.gz # 1gq8A.t06-thin90.a2m with 413 sequences, total weight= 413 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27504 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gq8A/info/1gq8A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gq8A/nostruct-align/1gq8A.t06-thin90.a2m.gz, have 86529 columns in 356 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pz4A/nostruct-align/1pz4A.t06-thin90.a2m.gz # 1pz4A.t06-thin90.a2m with 184 sequences, total weight= 97.1848 avg weight= 0.528178 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30146 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pz4A/info/1pz4A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1pz4A/nostruct-align/1pz4A.t06-thin90.a2m.gz, have 86642 columns in 357 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bjiA/nostruct-align/2bjiA.t06-thin90.a2m.gz # 2bjiA.t06-thin90.a2m with 1302 sequences, total weight= 1302 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13829 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bjiA/info/2bjiA.stride-mixed.n_notor WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/2b/2bjiA/nostruct-align/2bjiA.t06-thin90.a2m.gz, have 86916 columns in 358 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qmvA/nostruct-align/1qmvA.t06-thin90.a2m.gz # 1qmvA.t06-thin90.a2m with 2815 sequences, total weight= 2815 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12535 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qmvA/info/1qmvA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qmvA/nostruct-align/1qmvA.t06-thin90.a2m.gz, have 87113 columns in 359 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qgiA/nostruct-align/1qgiA.t06-thin90.a2m.gz # 1qgiA.t06-thin90.a2m with 22 sequences, total weight= 16.6454 avg weight= 0.756608 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qgiA/info/1qgiA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qgiA/nostruct-align/1qgiA.t06-thin90.a2m.gz, have 87372 columns in 360 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sfsA/nostruct-align/1sfsA.t06-thin90.a2m.gz # 1sfsA.t06-thin90.a2m with 18 sequences, total weight= 18 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10838 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sfsA/info/1sfsA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1sfsA/nostruct-align/1sfsA.t06-thin90.a2m.gz, have 87585 columns in 361 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ru4A/nostruct-align/1ru4A.t06-thin90.a2m.gz # 1ru4A.t06-thin90.a2m with 1708 sequences, total weight= 1708 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.853792 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ru4A/info/1ru4A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1ru4A/nostruct-align/1ru4A.t06-thin90.a2m.gz, have 87985 columns in 362 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m33A/nostruct-align/1m33A.t06-thin90.a2m.gz # 1m33A.t06-thin90.a2m with 9775 sequences, total weight= 9775 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.705881 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m33A/info/1m33A.stride-mixed.n_notor WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1m/1m33A/nostruct-align/1m33A.t06-thin90.a2m.gz, have 88240 columns in 363 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t4hA/nostruct-align/1t4hA.t06-thin90.a2m.gz # 1t4hA.t06-thin90.a2m with 13082 sequences, total weight= 13082 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18746 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t4hA/info/1t4hA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1t4hA/nostruct-align/1t4hA.t06-thin90.a2m.gz, have 88510 columns in 364 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1igqA/nostruct-align/1igqA.t06-thin90.a2m.gz # 1igqA.t06-thin90.a2m with 6 sequences, total weight= 2.45317 avg weight= 0.408862 10 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1igqA/info/1igqA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1igqA/nostruct-align/1igqA.t06-thin90.a2m.gz, have 88564 columns in 365 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mkkA/nostruct-align/1mkkA.t06-thin90.a2m.gz # 1mkkA.t06-thin90.a2m with 99 sequences, total weight= 27.2177 avg weight= 0.274926 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mkkA/info/1mkkA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mkkA/nostruct-align/1mkkA.t06-thin90.a2m.gz, have 88657 columns in 366 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pyfA/nostruct-align/1pyfA.t06-thin90.a2m.gz # 1pyfA.t06-thin90.a2m with 2615 sequences, total weight= 2615 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29218 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pyfA/info/1pyfA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1pyfA/nostruct-align/1pyfA.t06-thin90.a2m.gz, have 88968 columns in 367 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rxqA/nostruct-align/1rxqA.t06-thin90.a2m.gz # 1rxqA.t06-thin90.a2m with 397 sequences, total weight= 397 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.814545 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rxqA/info/1rxqA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rxqA/nostruct-align/1rxqA.t06-thin90.a2m.gz, have 89142 columns in 368 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1ql0A/nostruct-align/1ql0A.t06-thin90.a2m.gz # 1ql0A.t06-thin90.a2m with 259 sequences, total weight= 259 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12812 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1ql0A/info/1ql0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1ql0A/nostruct-align/1ql0A.t06-thin90.a2m.gz, have 89383 columns in 369 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qnrA/nostruct-align/1qnrA.t06-thin90.a2m.gz # 1qnrA.t06-thin90.a2m with 3082 sequences, total weight= 3082 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.789762 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qnrA/info/1qnrA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qnrA/nostruct-align/1qnrA.t06-thin90.a2m.gz, have 89727 columns in 370 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u07A/nostruct-align/1u07A.t06-thin90.a2m.gz # 1u07A.t06-thin90.a2m with 460 sequences, total weight= 460 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24517 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u07A/info/1u07A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1u07A/nostruct-align/1u07A.t06-thin90.a2m.gz, have 89817 columns in 371 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sh8A/nostruct-align/1sh8A.t06-thin90.a2m.gz # 1sh8A.t06-thin90.a2m with 1301 sequences, total weight= 1301 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.957286 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sh8A/info/1sh8A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1sh8A/nostruct-align/1sh8A.t06-thin90.a2m.gz, have 89970 columns in 372 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j71A/nostruct-align/1j71A.t06-thin90.a2m.gz # 1j71A.t06-thin90.a2m with 1154 sequences, total weight= 1154 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12818 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j71A/info/1j71A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1j71A/nostruct-align/1j71A.t06-thin90.a2m.gz, have 90304 columns in 373 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tr0A/nostruct-align/1tr0A.t06-thin90.a2m.gz # 1tr0A.t06-thin90.a2m with 169 sequences, total weight= 169 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13282 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tr0A/info/1tr0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1tr0A/nostruct-align/1tr0A.t06-thin90.a2m.gz, have 90410 columns in 374 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h32A/nostruct-align/1h32A.t06-thin90.a2m.gz # 1h32A.t06-thin90.a2m with 1746 sequences, total weight= 1746 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.95852 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h32A/info/1h32A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1h32A/nostruct-align/1h32A.t06-thin90.a2m.gz, have 90671 columns in 375 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bg6/nostruct-align/1bg6.t06-thin90.a2m.gz # 1bg6.t06-thin90.a2m with 7217 sequences, total weight= 7217 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.852603 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bg6/info/1bg6.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1b/1bg6/nostruct-align/1bg6.t06-thin90.a2m.gz, have 91020 columns in 376 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1idpA/nostruct-align/1idpA.t06-thin90.a2m.gz # 1idpA.t06-thin90.a2m with 32 sequences, total weight= 20.8122 avg weight= 0.65038 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1idpA/info/1idpA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1idpA/nostruct-align/1idpA.t06-thin90.a2m.gz, have 91167 columns in 377 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u5xA/nostruct-align/1u5xA.t06-thin90.a2m.gz # 1u5xA.t06-thin90.a2m with 174 sequences, total weight= 174 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26299 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u5xA/info/1u5xA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1u5xA/nostruct-align/1u5xA.t06-thin90.a2m.gz, have 91297 columns in 378 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kmvA/nostruct-align/1kmvA.t06-thin90.a2m.gz # 1kmvA.t06-thin90.a2m with 637 sequences, total weight= 637 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22473 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kmvA/info/1kmvA.stride-mixed.n_notor WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1k/1kmvA/nostruct-align/1kmvA.t06-thin90.a2m.gz, have 91482 columns in 379 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oi6A/nostruct-align/1oi6A.t06-thin90.a2m.gz # 1oi6A.t06-thin90.a2m with 472 sequences, total weight= 76.8991 avg weight= 0.162922 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30112 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oi6A/info/1oi6A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1oi6A/nostruct-align/1oi6A.t06-thin90.a2m.gz, have 91684 columns in 380 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uq5A/nostruct-align/1uq5A.t06-thin90.a2m.gz # 1uq5A.t06-thin90.a2m with 154 sequences, total weight= 154 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17236 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uq5A/info/1uq5A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1uq5A/nostruct-align/1uq5A.t06-thin90.a2m.gz, have 91947 columns in 381 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oxjA/nostruct-align/1oxjA.t06-thin90.a2m.gz # 1oxjA.t06-thin90.a2m with 28 sequences, total weight= 12.3213 avg weight= 0.440046 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oxjA/info/1oxjA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1oxjA/nostruct-align/1oxjA.t06-thin90.a2m.gz, have 92117 columns in 382 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nxmA/nostruct-align/1nxmA.t06-thin90.a2m.gz # 1nxmA.t06-thin90.a2m with 482 sequences, total weight= 77.308 avg weight= 0.16039 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30099 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nxmA/info/1nxmA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nxmA/nostruct-align/1nxmA.t06-thin90.a2m.gz, have 92311 columns in 383 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s9rA/nostruct-align/1s9rA.t06-thin90.a2m.gz # 1s9rA.t06-thin90.a2m with 453 sequences, total weight= 453 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16357 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s9rA/info/1s9rA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1s9rA/nostruct-align/1s9rA.t06-thin90.a2m.gz, have 92720 columns in 384 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i52A/nostruct-align/1i52A.t06-thin90.a2m.gz # 1i52A.t06-thin90.a2m with 3696 sequences, total weight= 3696 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02557 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i52A/info/1i52A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1i52A/nostruct-align/1i52A.t06-thin90.a2m.gz, have 92945 columns in 385 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p5vB/nostruct-align/1p5vB.t06-thin90.a2m.gz # 1p5vB.t06-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.614906 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p5vB/info/1p5vB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1p5vB/nostruct-align/1p5vB.t06-thin90.a2m.gz, have 93081 columns in 386 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nq7A/nostruct-align/1nq7A.t06-thin90.a2m.gz # 1nq7A.t06-thin90.a2m with 1142 sequences, total weight= 1142 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.969345 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nq7A/info/1nq7A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nq7A/nostruct-align/1nq7A.t06-thin90.a2m.gz, have 93325 columns in 387 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1is3A/nostruct-align/1is3A.t06-thin90.a2m.gz # 1is3A.t06-thin90.a2m with 339 sequences, total weight= 339 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28131 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1is3A/info/1is3A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1is3A/nostruct-align/1is3A.t06-thin90.a2m.gz, have 93459 columns in 388 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l3kA/nostruct-align/1l3kA.t06-thin90.a2m.gz # 1l3kA.t06-thin90.a2m with 4328 sequences, total weight= 4328 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11051 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l3kA/info/1l3kA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1l3kA/nostruct-align/1l3kA.t06-thin90.a2m.gz, have 93622 columns in 389 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nkr/nostruct-align/1nkr.t06-thin90.a2m.gz # 1nkr.t06-thin90.a2m with 5013 sequences, total weight= 5013 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.961149 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nkr/info/1nkr.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nkr/nostruct-align/1nkr.t06-thin90.a2m.gz, have 93817 columns in 390 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vh4A/nostruct-align/1vh4A.t06-thin90.a2m.gz # 1vh4A.t06-thin90.a2m with 462 sequences, total weight= 462 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27397 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vh4A/info/1vh4A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vh4A/nostruct-align/1vh4A.t06-thin90.a2m.gz, have 94227 columns in 391 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o97C/nostruct-align/1o97C.t06-thin90.a2m.gz # 1o97C.t06-thin90.a2m with 485 sequences, total weight= 126.473 avg weight= 0.260768 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30568 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o97C/info/1o97C.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1o97C/nostruct-align/1o97C.t06-thin90.a2m.gz, have 94478 columns in 392 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tyjA/nostruct-align/1tyjA.t06-thin90.a2m.gz # 1tyjA.t06-thin90.a2m with 26 sequences, total weight= 6.10008 avg weight= 0.234619 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tyjA/info/1tyjA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1tyjA/nostruct-align/1tyjA.t06-thin90.a2m.gz, have 94648 columns in 393 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vd6A/nostruct-align/1vd6A.t06-thin90.a2m.gz # 1vd6A.t06-thin90.a2m with 867 sequences, total weight= 867 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10984 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vd6A/info/1vd6A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vd6A/nostruct-align/1vd6A.t06-thin90.a2m.gz, have 94866 columns in 394 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vpmA/nostruct-align/1vpmA.t06-thin90.a2m.gz # 1vpmA.t06-thin90.a2m with 1181 sequences, total weight= 1181 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01862 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vpmA/info/1vpmA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vpmA/nostruct-align/1vpmA.t06-thin90.a2m.gz, have 95021 columns in 395 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k77A/nostruct-align/1k77A.t06-thin90.a2m.gz # 1k77A.t06-thin90.a2m with 1419 sequences, total weight= 1419 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.906118 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k77A/info/1k77A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1k77A/nostruct-align/1k77A.t06-thin90.a2m.gz, have 95281 columns in 396 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rzhM/nostruct-align/1rzhM.t06-thin90.a2m.gz # 1rzhM.t06-thin90.a2m with 255 sequences, total weight= 16.8139 avg weight= 0.0659368 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rzhM/info/1rzhM.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rzhM/nostruct-align/1rzhM.t06-thin90.a2m.gz, have 95582 columns in 397 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rwzA/nostruct-align/1rwzA.t06-thin90.a2m.gz # 1rwzA.t06-thin90.a2m with 213 sequences, total weight= 213 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16594 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rwzA/info/1rwzA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rwzA/nostruct-align/1rwzA.t06-thin90.a2m.gz, have 95826 columns in 398 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iu8A/nostruct-align/1iu8A.t06-thin90.a2m.gz # 1iu8A.t06-thin90.a2m with 165 sequences, total weight= 137.129 avg weight= 0.831082 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30059 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iu8A/info/1iu8A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1iu8A/nostruct-align/1iu8A.t06-thin90.a2m.gz, have 96032 columns in 399 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jh6A/nostruct-align/1jh6A.t06-thin90.a2m.gz # 1jh6A.t06-thin90.a2m with 333 sequences, total weight= 333 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04464 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jh6A/info/1jh6A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jh6A/nostruct-align/1jh6A.t06-thin90.a2m.gz, have 96213 columns in 400 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nykA/nostruct-align/1nykA.t06-thin90.a2m.gz # 1nykA.t06-thin90.a2m with 1625 sequences, total weight= 1625 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09861 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nykA/info/1nykA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nykA/nostruct-align/1nykA.t06-thin90.a2m.gz, have 96369 columns in 401 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w0nA/nostruct-align/1w0nA.t06-thin90.a2m.gz # 1w0nA.t06-thin90.a2m with 6 sequences, total weight= 3.04415 avg weight= 0.507358 13 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w0nA/info/1w0nA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1w0nA/nostruct-align/1w0nA.t06-thin90.a2m.gz, have 96489 columns in 402 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u7lA/nostruct-align/1u7lA.t06-thin90.a2m.gz # 1u7lA.t06-thin90.a2m with 73 sequences, total weight= 29.7544 avg weight= 0.407594 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u7lA/info/1u7lA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1u7lA/nostruct-align/1u7lA.t06-thin90.a2m.gz, have 96853 columns in 403 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xgkA/nostruct-align/1xgkA.t06-thin90.a2m.gz # 1xgkA.t06-thin90.a2m with 7956 sequences, total weight= 7956 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.82734 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xgkA/info/1xgkA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xgkA/nostruct-align/1xgkA.t06-thin90.a2m.gz, have 97178 columns in 404 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q8dA/nostruct-align/1q8dA.t06-thin90.a2m.gz # 1q8dA.t06-thin90.a2m with 28 sequences, total weight= 5.41827 avg weight= 0.19351 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q8dA/info/1q8dA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1q8dA/nostruct-align/1q8dA.t06-thin90.a2m.gz, have 97278 columns in 405 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fsgA/nostruct-align/1fsgA.t06-thin90.a2m.gz # 1fsgA.t06-thin90.a2m with 2776 sequences, total weight= 2776 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05701 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fsgA/info/1fsgA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1fsgA/nostruct-align/1fsgA.t06-thin90.a2m.gz, have 97511 columns in 406 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1ts9A/nostruct-align/1ts9A.t06-thin90.a2m.gz # 1ts9A.t06-thin90.a2m with 71 sequences, total weight= 39.8298 avg weight= 0.560983 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1ts9A/info/1ts9A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1ts9A/nostruct-align/1ts9A.t06-thin90.a2m.gz, have 97609 columns in 407 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kshB/nostruct-align/1kshB.t06-thin90.a2m.gz # 1kshB.t06-thin90.a2m with 53 sequences, total weight= 13.082 avg weight= 0.24683 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kshB/info/1kshB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kshB/nostruct-align/1kshB.t06-thin90.a2m.gz, have 97751 columns in 408 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y7yA/nostruct-align/1y7yA.t06-thin90.a2m.gz # 1y7yA.t06-thin90.a2m with 1904 sequences, total weight= 1080.14 avg weight= 0.567303 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31592 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y7yA/info/1y7yA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1y7yA/nostruct-align/1y7yA.t06-thin90.a2m.gz, have 97820 columns in 409 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a4iA/nostruct-align/1a4iA.t06-thin90.a2m.gz # 1a4iA.t06-thin90.a2m with 701 sequences, total weight= 77.94 avg weight= 0.111184 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30187 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a4iA/info/1a4iA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1a/1a4iA/nostruct-align/1a4iA.t06-thin90.a2m.gz, have 98105 columns in 410 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jubA/nostruct-align/1jubA.t06-thin90.a2m.gz # 1jubA.t06-thin90.a2m with 2956 sequences, total weight= 2956 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00788 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jubA/info/1jubA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jubA/nostruct-align/1jubA.t06-thin90.a2m.gz, have 98416 columns in 411 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oflA/nostruct-align/1oflA.t06-thin90.a2m.gz # 1oflA.t06-thin90.a2m with 990 sequences, total weight= 990 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.910873 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oflA/info/1oflA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1oflA/nostruct-align/1oflA.t06-thin90.a2m.gz, have 98897 columns in 412 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wcv1/nostruct-align/1wcv1.t06-thin90.a2m.gz # 1wcv1.t06-thin90.a2m with 3904 sequences, total weight= 3904 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.957907 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wcv1/info/1wcv1.stride-mixed.n_notor WARNING: skipping h, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1w/1wcv1/nostruct-align/1wcv1.t06-thin90.a2m.gz, have 99140 columns in 413 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vhnA/nostruct-align/1vhnA.t06-thin90.a2m.gz # 1vhnA.t06-thin90.a2m with 1613 sequences, total weight= 1613 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07318 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vhnA/info/1vhnA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vhnA/nostruct-align/1vhnA.t06-thin90.a2m.gz, have 99445 columns in 414 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c5eA/nostruct-align/1c5eA.t06-thin90.a2m.gz # 1c5eA.t06-thin90.a2m with 13 sequences, total weight= 6.72745 avg weight= 0.517496 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c5eA/info/1c5eA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1c/1c5eA/nostruct-align/1c5eA.t06-thin90.a2m.gz, have 99540 columns in 415 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rwjA/nostruct-align/1rwjA.t06-thin90.a2m.gz # 1rwjA.t06-thin90.a2m with 101 sequences, total weight= 35.5657 avg weight= 0.352136 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rwjA/info/1rwjA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rwjA/nostruct-align/1rwjA.t06-thin90.a2m.gz, have 99621 columns in 416 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p3dA/nostruct-align/1p3dA.t06-thin90.a2m.gz # 1p3dA.t06-thin90.a2m with 2191 sequences, total weight= 2191 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11045 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p3dA/info/1p3dA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1p3dA/nostruct-align/1p3dA.t06-thin90.a2m.gz, have 100084 columns in 417 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x8qA/nostruct-align/1x8qA.t06-thin90.a2m.gz # 1x8qA.t06-thin90.a2m with 130 sequences, total weight= 130 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17069 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x8qA/info/1x8qA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1x8qA/nostruct-align/1x8qA.t06-thin90.a2m.gz, have 100268 columns in 418 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2s/2sak/nostruct-align/2sak.t06-thin90.a2m.gz # 2sak.t06-thin90.a2m with 6 sequences, total weight= 5.94261 avg weight= 0.990435 11 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2s/2sak/info/2sak.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2s/2sak/nostruct-align/2sak.t06-thin90.a2m.gz, have 100389 columns in 419 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d0qA/nostruct-align/1d0qA.t06-thin90.a2m.gz # 1d0qA.t06-thin90.a2m with 365 sequences, total weight= 49.7716 avg weight= 0.136361 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30077 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d0qA/info/1d0qA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1d0qA/nostruct-align/1d0qA.t06-thin90.a2m.gz, have 100491 columns in 420 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xe7A/nostruct-align/1xe7A.t06-thin90.a2m.gz # 1xe7A.t06-thin90.a2m with 133 sequences, total weight= 38.7713 avg weight= 0.291514 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xe7A/info/1xe7A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xe7A/nostruct-align/1xe7A.t06-thin90.a2m.gz, have 100677 columns in 421 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1npyA/nostruct-align/1npyA.t06-thin90.a2m.gz # 1npyA.t06-thin90.a2m with 792 sequences, total weight= 792 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2885 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1npyA/info/1npyA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1npyA/nostruct-align/1npyA.t06-thin90.a2m.gz, have 100946 columns in 422 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bl8A/nostruct-align/2bl8A.t06-thin90.a2m.gz # 2bl8A.t06-thin90.a2m with 13 sequences, total weight= 7.01177 avg weight= 0.539367 19 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bl8A/info/2bl8A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2b/2bl8A/nostruct-align/2bl8A.t06-thin90.a2m.gz, have 101039 columns in 423 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fs7A/nostruct-align/1fs7A.t06-thin90.a2m.gz # 1fs7A.t06-thin90.a2m with 962 sequences, total weight= 962 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.851043 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fs7A/info/1fs7A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1fs7A/nostruct-align/1fs7A.t06-thin90.a2m.gz, have 101510 columns in 424 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eazA/nostruct-align/1eazA.t06-thin90.a2m.gz # 1eazA.t06-thin90.a2m with 376 sequences, total weight= 376 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0124 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eazA/info/1eazA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1eazA/nostruct-align/1eazA.t06-thin90.a2m.gz, have 101613 columns in 425 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pg6A/nostruct-align/1pg6A.t06-thin90.a2m.gz # 1pg6A.t06-thin90.a2m with 191 sequences, total weight= 112.506 avg weight= 0.589034 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30133 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pg6A/info/1pg6A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1pg6A/nostruct-align/1pg6A.t06-thin90.a2m.gz, have 101829 columns in 426 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uj8A/nostruct-align/1uj8A.t06-thin90.a2m.gz # 1uj8A.t06-thin90.a2m with 70 sequences, total weight= 8.48899 avg weight= 0.121271 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uj8A/info/1uj8A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1uj8A/nostruct-align/1uj8A.t06-thin90.a2m.gz, have 101902 columns in 427 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1npsA/nostruct-align/1npsA.t06-thin90.a2m.gz # 1npsA.t06-thin90.a2m with 21 sequences, total weight= 12.1877 avg weight= 0.580366 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1npsA/info/1npsA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1npsA/nostruct-align/1npsA.t06-thin90.a2m.gz, have 101990 columns in 428 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ypqA/nostruct-align/1ypqA.t06-thin90.a2m.gz # 1ypqA.t06-thin90.a2m with 2305 sequences, total weight= 2305 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01616 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ypqA/info/1ypqA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1ypqA/nostruct-align/1ypqA.t06-thin90.a2m.gz, have 102121 columns in 429 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1arb/nostruct-align/1arb.t06-thin90.a2m.gz # 1arb.t06-thin90.a2m with 3343 sequences, total weight= 3343 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11267 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1arb/info/1arb.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1a/1arb/nostruct-align/1arb.t06-thin90.a2m.gz, have 102384 columns in 430 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jyaA/nostruct-align/1jyaA.t06-thin90.a2m.gz # 1jyaA.t06-thin90.a2m with 5 sequences, total weight= 4.88713 avg weight= 0.977426 11 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jyaA/info/1jyaA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jyaA/nostruct-align/1jyaA.t06-thin90.a2m.gz, have 102501 columns in 431 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yndA/nostruct-align/1yndA.t06-thin90.a2m.gz # 1yndA.t06-thin90.a2m with 1457 sequences, total weight= 83.8985 avg weight= 0.057583 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30466 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yndA/info/1yndA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1yndA/nostruct-align/1yndA.t06-thin90.a2m.gz, have 102665 columns in 432 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i19A/nostruct-align/1i19A.t06-thin90.a2m.gz # 1i19A.t06-thin90.a2m with 1933 sequences, total weight= 1933 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1005 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i19A/info/1i19A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1i19A/nostruct-align/1i19A.t06-thin90.a2m.gz, have 103206 columns in 433 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dljA/nostruct-align/1dljA.t06-thin90.a2m.gz # 1dljA.t06-thin90.a2m with 4423 sequences, total weight= 4423 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0144 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dljA/info/1dljA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1dljA/nostruct-align/1dljA.t06-thin90.a2m.gz, have 103608 columns in 434 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1go3E/nostruct-align/1go3E.t06-thin90.a2m.gz # 1go3E.t06-thin90.a2m with 1844 sequences, total weight= 1844 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08779 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1go3E/info/1go3E.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1go3E/nostruct-align/1go3E.t06-thin90.a2m.gz, have 103785 columns in 435 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fo8A/nostruct-align/1fo8A.t06-thin90.a2m.gz # 1fo8A.t06-thin90.a2m with 1958 sequences, total weight= 1958 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.817318 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fo8A/info/1fo8A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1fo8A/nostruct-align/1fo8A.t06-thin90.a2m.gz, have 104115 columns in 436 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bdo/nostruct-align/1bdo.t06-thin90.a2m.gz # 1bdo.t06-thin90.a2m with 904 sequences, total weight= 44.9954 avg weight= 0.0497736 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.302 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bdo/info/1bdo.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1b/1bdo/nostruct-align/1bdo.t06-thin90.a2m.gz, have 104195 columns in 437 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rwhA/nostruct-align/1rwhA.t06-thin90.a2m.gz # 1rwhA.t06-thin90.a2m with 82 sequences, total weight= 82 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10606 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rwhA/info/1rwhA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rwhA/nostruct-align/1rwhA.t06-thin90.a2m.gz, have 104949 columns in 438 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j7xA/nostruct-align/1j7xA.t06-thin90.a2m.gz # 1j7xA.t06-thin90.a2m with 775 sequences, total weight= 775 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17532 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j7xA/info/1j7xA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1j7xA/nostruct-align/1j7xA.t06-thin90.a2m.gz, have 105251 columns in 439 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ukkA/nostruct-align/1ukkA.t06-thin90.a2m.gz # 1ukkA.t06-thin90.a2m with 708 sequences, total weight= 708 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11124 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ukkA/info/1ukkA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1ukkA/nostruct-align/1ukkA.t06-thin90.a2m.gz, have 105392 columns in 440 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m15A/nostruct-align/1m15A.t06-thin90.a2m.gz # 1m15A.t06-thin90.a2m with 234 sequences, total weight= 31.9187 avg weight= 0.136405 42 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m15A/info/1m15A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1m15A/nostruct-align/1m15A.t06-thin90.a2m.gz, have 105748 columns in 441 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bkrA/nostruct-align/1bkrA.t06-thin90.a2m.gz # 1bkrA.t06-thin90.a2m with 312 sequences, total weight= 83.2352 avg weight= 0.266779 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30251 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bkrA/info/1bkrA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1b/1bkrA/nostruct-align/1bkrA.t06-thin90.a2m.gz, have 105856 columns in 442 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qlwA/nostruct-align/1qlwA.t06-thin90.a2m.gz # 1qlwA.t06-thin90.a2m with 11654 sequences, total weight= 11654 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.771846 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qlwA/info/1qlwA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qlwA/nostruct-align/1qlwA.t06-thin90.a2m.gz, have 106174 columns in 443 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x8vA/nostruct-align/1x8vA.t06-thin90.a2m.gz # 1x8vA.t06-thin90.a2m with 5692 sequences, total weight= 5692 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01857 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x8vA/info/1x8vA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1x8vA/nostruct-align/1x8vA.t06-thin90.a2m.gz, have 106603 columns in 444 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1elkA/nostruct-align/1elkA.t06-thin90.a2m.gz # 1elkA.t06-thin90.a2m with 224 sequences, total weight= 208.355 avg weight= 0.930154 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30055 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1elkA/info/1elkA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1elkA/nostruct-align/1elkA.t06-thin90.a2m.gz, have 106756 columns in 445 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f1mA/nostruct-align/1f1mA.t06-thin90.a2m.gz # 1f1mA.t06-thin90.a2m with 144 sequences, total weight= 6.13118 avg weight= 0.0425777 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f1mA/info/1f1mA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1f1mA/nostruct-align/1f1mA.t06-thin90.a2m.gz, have 106918 columns in 446 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vkkA/nostruct-align/1vkkA.t06-thin90.a2m.gz # 1vkkA.t06-thin90.a2m with 274 sequences, total weight= 242.573 avg weight= 0.885302 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30081 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vkkA/info/1vkkA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vkkA/nostruct-align/1vkkA.t06-thin90.a2m.gz, have 107055 columns in 447 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r2qA/nostruct-align/1r2qA.t06-thin90.a2m.gz # 1r2qA.t06-thin90.a2m with 4879 sequences, total weight= 4879 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12925 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r2qA/info/1r2qA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1r2qA/nostruct-align/1r2qA.t06-thin90.a2m.gz, have 107225 columns in 448 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1edg/nostruct-align/1edg.t06-thin90.a2m.gz # 1edg.t06-thin90.a2m with 2378 sequences, total weight= 2378 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.842029 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1edg/info/1edg.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1edg/nostruct-align/1edg.t06-thin90.a2m.gz, have 107605 columns in 449 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cnzA/nostruct-align/1cnzA.t06-thin90.a2m.gz # 1cnzA.t06-thin90.a2m with 990 sequences, total weight= 69.8349 avg weight= 0.0705403 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30209 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cnzA/info/1cnzA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1c/1cnzA/nostruct-align/1cnzA.t06-thin90.a2m.gz, have 107968 columns in 450 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w96A/nostruct-align/1w96A.t06-thin90.a2m.gz # 1w96A.t06-thin90.a2m with 3758 sequences, total weight= 3758 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15824 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w96A/info/1w96A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1w96A/nostruct-align/1w96A.t06-thin90.a2m.gz, have 108517 columns in 451 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k4nA/nostruct-align/1k4nA.t06-thin90.a2m.gz # 1k4nA.t06-thin90.a2m with 39 sequences, total weight= 10.5585 avg weight= 0.270732 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k4nA/info/1k4nA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1k4nA/nostruct-align/1k4nA.t06-thin90.a2m.gz, have 108700 columns in 452 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gxrA/nostruct-align/1gxrA.t06-thin90.a2m.gz # 1gxrA.t06-thin90.a2m with 10802 sequences, total weight= 10802 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.761882 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gxrA/info/1gxrA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gxrA/nostruct-align/1gxrA.t06-thin90.a2m.gz, have 109035 columns in 453 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qv9A/nostruct-align/1qv9A.t06-thin90.a2m.gz # 1qv9A.t06-thin90.a2m with 13 sequences, total weight= 3.99171 avg weight= 0.307054 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qv9A/info/1qv9A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qv9A/nostruct-align/1qv9A.t06-thin90.a2m.gz, have 109317 columns in 454 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rwiA/nostruct-align/1rwiA.t06-thin90.a2m.gz # 1rwiA.t06-thin90.a2m with 10118 sequences, total weight= 10118 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.751364 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rwiA/info/1rwiA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rwiA/nostruct-align/1rwiA.t06-thin90.a2m.gz, have 109573 columns in 455 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2dpmA/nostruct-align/2dpmA.t06-thin90.a2m.gz # 2dpmA.t06-thin90.a2m with 388 sequences, total weight= 388 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09949 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2dpmA/info/2dpmA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2d/2dpmA/nostruct-align/2dpmA.t06-thin90.a2m.gz, have 109831 columns in 456 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u14A/nostruct-align/1u14A.t06-thin90.a2m.gz # 1u14A.t06-thin90.a2m with 60 sequences, total weight= 16.7299 avg weight= 0.278832 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u14A/info/1u14A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1u14A/nostruct-align/1u14A.t06-thin90.a2m.gz, have 110000 columns in 457 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54H/nostruct-align/1v54H.t06-thin90.a2m.gz # 1v54H.t06-thin90.a2m with 49 sequences, total weight= 9.45561 avg weight= 0.192972 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54H/info/1v54H.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1v54H/nostruct-align/1v54H.t06-thin90.a2m.gz, have 110079 columns in 458 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bx4A/nostruct-align/1bx4A.t06-thin90.a2m.gz # 1bx4A.t06-thin90.a2m with 2391 sequences, total weight= 2391 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03318 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bx4A/info/1bx4A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1b/1bx4A/nostruct-align/1bx4A.t06-thin90.a2m.gz, have 110421 columns in 459 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e42A/nostruct-align/1e42A.t06-thin90.a2m.gz # 1e42A.t06-thin90.a2m with 40 sequences, total weight= 27.1391 avg weight= 0.678477 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e42A/info/1e42A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1e42A/nostruct-align/1e42A.t06-thin90.a2m.gz, have 110654 columns in 460 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t56A/nostruct-align/1t56A.t06-thin90.a2m.gz # 1t56A.t06-thin90.a2m with 5472 sequences, total weight= 5472 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.819336 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t56A/info/1t56A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1t56A/nostruct-align/1t56A.t06-thin90.a2m.gz, have 110847 columns in 461 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tmxA/nostruct-align/1tmxA.t06-thin90.a2m.gz # 1tmxA.t06-thin90.a2m with 423 sequences, total weight= 155.394 avg weight= 0.367363 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30193 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tmxA/info/1tmxA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1tmxA/nostruct-align/1tmxA.t06-thin90.a2m.gz, have 111139 columns in 462 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lmiA/nostruct-align/1lmiA.t06-thin90.a2m.gz # 1lmiA.t06-thin90.a2m with 10 sequences, total weight= 4.47282 avg weight= 0.447282 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lmiA/info/1lmiA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1lmiA/nostruct-align/1lmiA.t06-thin90.a2m.gz, have 111270 columns in 463 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gp0A/nostruct-align/1gp0A.t06-thin90.a2m.gz # 1gp0A.t06-thin90.a2m with 348 sequences, total weight= 348 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25303 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gp0A/info/1gp0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gp0A/nostruct-align/1gp0A.t06-thin90.a2m.gz, have 111403 columns in 464 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1opd/nostruct-align/1opd.t06-thin90.a2m.gz # 1opd.t06-thin90.a2m with 363 sequences, total weight= 27.9543 avg weight= 0.0770092 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1opd/info/1opd.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1opd/nostruct-align/1opd.t06-thin90.a2m.gz, have 111488 columns in 465 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vl7A/nostruct-align/1vl7A.t06-thin90.a2m.gz # 1vl7A.t06-thin90.a2m with 85 sequences, total weight= 85 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01223 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vl7A/info/1vl7A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vl7A/nostruct-align/1vl7A.t06-thin90.a2m.gz, have 111623 columns in 466 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mqoA/nostruct-align/1mqoA.t06-thin90.a2m.gz # 1mqoA.t06-thin90.a2m with 4544 sequences, total weight= 4544 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.86928 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mqoA/info/1mqoA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mqoA/nostruct-align/1mqoA.t06-thin90.a2m.gz, have 111844 columns in 467 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a73A/nostruct-align/1a73A.t06-thin90.a2m.gz # 1a73A.t06-thin90.a2m with 19 sequences, total weight= 19 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04928 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a73A/info/1a73A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1a/1a73A/nostruct-align/1a73A.t06-thin90.a2m.gz, have 112006 columns in 468 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1no5A/nostruct-align/1no5A.t06-thin90.a2m.gz # 1no5A.t06-thin90.a2m with 624 sequences, total weight= 624 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0543 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1no5A/info/1no5A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1no5A/nostruct-align/1no5A.t06-thin90.a2m.gz, have 112106 columns in 469 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fltX/nostruct-align/1fltX.t06-thin90.a2m.gz # 1fltX.t06-thin90.a2m with 57 sequences, total weight= 31.5243 avg weight= 0.553058 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fltX/info/1fltX.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1fltX/nostruct-align/1fltX.t06-thin90.a2m.gz, have 112201 columns in 470 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lf7A/nostruct-align/1lf7A.t06-thin90.a2m.gz # 1lf7A.t06-thin90.a2m with 596 sequences, total weight= 596 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.964619 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lf7A/info/1lf7A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1lf7A/nostruct-align/1lf7A.t06-thin90.a2m.gz, have 112365 columns in 471 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ew0A/nostruct-align/1ew0A.t06-thin90.a2m.gz # 1ew0A.t06-thin90.a2m with 10026 sequences, total weight= 10026 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.842063 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ew0A/info/1ew0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1ew0A/nostruct-align/1ew0A.t06-thin90.a2m.gz, have 112495 columns in 472 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nxuA/nostruct-align/1nxuA.t06-thin90.a2m.gz # 1nxuA.t06-thin90.a2m with 186 sequences, total weight= 46.4414 avg weight= 0.249685 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nxuA/info/1nxuA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nxuA/nostruct-align/1nxuA.t06-thin90.a2m.gz, have 112827 columns in 473 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f9yA/nostruct-align/1f9yA.t06-thin90.a2m.gz # 1f9yA.t06-thin90.a2m with 420 sequences, total weight= 40.7528 avg weight= 0.0970304 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30082 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f9yA/info/1f9yA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1f9yA/nostruct-align/1f9yA.t06-thin90.a2m.gz, have 112985 columns in 474 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3e/3ezmA/nostruct-align/3ezmA.t06-thin90.a2m.gz # 3ezmA.t06-thin90.a2m with 46 sequences, total weight= 34.4913 avg weight= 0.74981 42 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3e/3ezmA/info/3ezmA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/3e/3ezmA/nostruct-align/3ezmA.t06-thin90.a2m.gz, have 113086 columns in 475 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vmhA/nostruct-align/1vmhA.t06-thin90.a2m.gz # 1vmhA.t06-thin90.a2m with 276 sequences, total weight= 17.6539 avg weight= 0.0639632 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vmhA/info/1vmhA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vmhA/nostruct-align/1vmhA.t06-thin90.a2m.gz, have 113215 columns in 476 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h05A/nostruct-align/1h05A.t06-thin90.a2m.gz # 1h05A.t06-thin90.a2m with 306 sequences, total weight= 11.6459 avg weight= 0.0380587 37 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h05A/info/1h05A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1h05A/nostruct-align/1h05A.t06-thin90.a2m.gz, have 113353 columns in 477 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s7iA/nostruct-align/1s7iA.t06-thin90.a2m.gz # 1s7iA.t06-thin90.a2m with 180 sequences, total weight= 75.7397 avg weight= 0.420776 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30095 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s7iA/info/1s7iA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1s7iA/nostruct-align/1s7iA.t06-thin90.a2m.gz, have 113477 columns in 478 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p9hA/nostruct-align/1p9hA.t06-thin90.a2m.gz # 1p9hA.t06-thin90.a2m with 585 sequences, total weight= 55.5466 avg weight= 0.0949515 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p9hA/info/1p9hA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1p9hA/nostruct-align/1p9hA.t06-thin90.a2m.gz, have 113656 columns in 479 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mwqA/nostruct-align/1mwqA.t06-thin90.a2m.gz # 1mwqA.t06-thin90.a2m with 277 sequences, total weight= 118.648 avg weight= 0.428332 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30296 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mwqA/info/1mwqA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mwqA/nostruct-align/1mwqA.t06-thin90.a2m.gz, have 113756 columns in 480 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ifrA/nostruct-align/1ifrA.t06-thin90.a2m.gz # 1ifrA.t06-thin90.a2m with 102 sequences, total weight= 29.6143 avg weight= 0.290337 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ifrA/info/1ifrA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1ifrA/nostruct-align/1ifrA.t06-thin90.a2m.gz, have 113869 columns in 481 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ej0A/nostruct-align/1ej0A.t06-thin90.a2m.gz # 1ej0A.t06-thin90.a2m with 2188 sequences, total weight= 2188 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02462 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ej0A/info/1ej0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1ej0A/nostruct-align/1ej0A.t06-thin90.a2m.gz, have 114049 columns in 482 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kq6A/nostruct-align/1kq6A.t06-thin90.a2m.gz # 1kq6A.t06-thin90.a2m with 555 sequences, total weight= 555 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04025 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kq6A/info/1kq6A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kq6A/nostruct-align/1kq6A.t06-thin90.a2m.gz, have 114189 columns in 483 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3s/3sdhA/nostruct-align/3sdhA.t06-thin90.a2m.gz # 3sdhA.t06-thin90.a2m with 1049 sequences, total weight= 1049 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19814 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3s/3sdhA/info/3sdhA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/3s/3sdhA/nostruct-align/3sdhA.t06-thin90.a2m.gz, have 114334 columns in 484 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1snyA/nostruct-align/1snyA.t06-thin90.a2m.gz # 1snyA.t06-thin90.a2m with 13037 sequences, total weight= 13037 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09949 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1snyA/info/1snyA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1snyA/nostruct-align/1snyA.t06-thin90.a2m.gz, have 114582 columns in 485 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x6oA/nostruct-align/1x6oA.t06-thin90.a2m.gz # 1x6oA.t06-thin90.a2m with 126 sequences, total weight= 23.3566 avg weight= 0.18537 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x6oA/info/1x6oA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1x6oA/nostruct-align/1x6oA.t06-thin90.a2m.gz, have 114725 columns in 486 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jpzA/nostruct-align/1jpzA.t06-thin90.a2m.gz # 1jpzA.t06-thin90.a2m with 5720 sequences, total weight= 5720 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.996394 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jpzA/info/1jpzA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jpzA/nostruct-align/1jpzA.t06-thin90.a2m.gz, have 115181 columns in 487 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2t/2tnfA/nostruct-align/2tnfA.t06-thin90.a2m.gz # 2tnfA.t06-thin90.a2m with 183 sequences, total weight= 156.147 avg weight= 0.853264 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30073 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2t/2tnfA/info/2tnfA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2t/2tnfA/nostruct-align/2tnfA.t06-thin90.a2m.gz, have 115329 columns in 488 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uwfA/nostruct-align/1uwfA.t06-thin90.a2m.gz # 1uwfA.t06-thin90.a2m with 10 sequences, total weight= 5.67266 avg weight= 0.567266 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uwfA/info/1uwfA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1uwfA/nostruct-align/1uwfA.t06-thin90.a2m.gz, have 115487 columns in 489 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d4xG/nostruct-align/1d4xG.t06-thin90.a2m.gz # 1d4xG.t06-thin90.a2m with 569 sequences, total weight= 569 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1199 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d4xG/info/1d4xG.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1d4xG/nostruct-align/1d4xG.t06-thin90.a2m.gz, have 115611 columns in 490 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f86A/nostruct-align/1f86A.t06-thin90.a2m.gz # 1f86A.t06-thin90.a2m with 152 sequences, total weight= 15.0087 avg weight= 0.0987415 42 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f86A/info/1f86A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1f86A/nostruct-align/1f86A.t06-thin90.a2m.gz, have 115726 columns in 491 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1orrA/nostruct-align/1orrA.t06-thin90.a2m.gz # 1orrA.t06-thin90.a2m with 12913 sequences, total weight= 12913 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.908135 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1orrA/info/1orrA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1orrA/nostruct-align/1orrA.t06-thin90.a2m.gz, have 116064 columns in 492 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m4iA/nostruct-align/1m4iA.t06-thin90.a2m.gz # 1m4iA.t06-thin90.a2m with 7840 sequences, total weight= 7840 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.817438 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m4iA/info/1m4iA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1m4iA/nostruct-align/1m4iA.t06-thin90.a2m.gz, have 116245 columns in 493 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rtqA/nostruct-align/1rtqA.t06-thin90.a2m.gz # 1rtqA.t06-thin90.a2m with 3140 sequences, total weight= 3140 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.89701 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rtqA/info/1rtqA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rtqA/nostruct-align/1rtqA.t06-thin90.a2m.gz, have 116536 columns in 494 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g6sA/nostruct-align/1g6sA.t06-thin90.a2m.gz # 1g6sA.t06-thin90.a2m with 831 sequences, total weight= 106.101 avg weight= 0.127679 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30686 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g6sA/info/1g6sA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1g6sA/nostruct-align/1g6sA.t06-thin90.a2m.gz, have 116963 columns in 495 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r2mA/nostruct-align/1r2mA.t06-thin90.a2m.gz # 1r2mA.t06-thin90.a2m with 20 sequences, total weight= 4.59856 avg weight= 0.229928 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r2mA/info/1r2mA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1r2mA/nostruct-align/1r2mA.t06-thin90.a2m.gz, have 117033 columns in 496 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nqzA/nostruct-align/1nqzA.t06-thin90.a2m.gz # 1nqzA.t06-thin90.a2m with 3614 sequences, total weight= 3614 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.867136 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nqzA/info/1nqzA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nqzA/nostruct-align/1nqzA.t06-thin90.a2m.gz, have 117204 columns in 497 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2e/2eng/nostruct-align/2eng.t06-thin90.a2m.gz # 2eng.t06-thin90.a2m with 38 sequences, total weight= 7.32481 avg weight= 0.192758 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2e/2eng/info/2eng.stride-mixed.n_notor WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/2e/2eng/nostruct-align/2eng.t06-thin90.a2m.gz, have 117409 columns in 498 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kafA/nostruct-align/1kafA.t06-thin90.a2m.gz # 1kafA.t06-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.964603 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kafA/info/1kafA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kafA/nostruct-align/1kafA.t06-thin90.a2m.gz, have 117517 columns in 499 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1ku3A/nostruct-align/1ku3A.t06-thin90.a2m.gz # 1ku3A.t06-thin90.a2m with 324 sequences, total weight= 12.0382 avg weight= 0.037155 43 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1ku3A/info/1ku3A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1ku3A/nostruct-align/1ku3A.t06-thin90.a2m.gz, have 117578 columns in 500 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rkqA/nostruct-align/1rkqA.t06-thin90.a2m.gz # 1rkqA.t06-thin90.a2m with 4360 sequences, total weight= 4360 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.948063 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rkqA/info/1rkqA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rkqA/nostruct-align/1rkqA.t06-thin90.a2m.gz, have 117849 columns in 501 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qg8A/nostruct-align/1qg8A.t06-thin90.a2m.gz # 1qg8A.t06-thin90.a2m with 5792 sequences, total weight= 5792 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.816266 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qg8A/info/1qg8A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qg8A/nostruct-align/1qg8A.t06-thin90.a2m.gz, have 118087 columns in 502 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lm5A/nostruct-align/1lm5A.t06-thin90.a2m.gz # 1lm5A.t06-thin90.a2m with 237 sequences, total weight= 237 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28611 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lm5A/info/1lm5A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1lm5A/nostruct-align/1lm5A.t06-thin90.a2m.gz, have 118276 columns in 503 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cuaA/nostruct-align/2cuaA.t06-thin90.a2m.gz # 2cuaA.t06-thin90.a2m with 1409 sequences, total weight= 60.8323 avg weight= 0.0431741 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30222 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cuaA/info/2cuaA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2c/2cuaA/nostruct-align/2cuaA.t06-thin90.a2m.gz, have 118398 columns in 504 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mla/nostruct-align/1mla.t06-thin90.a2m.gz # 1mla.t06-thin90.a2m with 1856 sequences, total weight= 1856 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22883 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mla/info/1mla.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mla/nostruct-align/1mla.t06-thin90.a2m.gz, have 118703 columns in 505 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f9vA/nostruct-align/1f9vA.t06-thin90.a2m.gz # 1f9vA.t06-thin90.a2m with 1295 sequences, total weight= 107.775 avg weight= 0.0832239 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31019 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f9vA/info/1f9vA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1f9vA/nostruct-align/1f9vA.t06-thin90.a2m.gz, have 119016 columns in 506 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s2oA/nostruct-align/1s2oA.t06-thin90.a2m.gz # 1s2oA.t06-thin90.a2m with 4274 sequences, total weight= 4274 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.891207 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s2oA/info/1s2oA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1s2oA/nostruct-align/1s2oA.t06-thin90.a2m.gz, have 119260 columns in 507 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k92A/nostruct-align/1k92A.t06-thin90.a2m.gz # 1k92A.t06-thin90.a2m with 1884 sequences, total weight= 1884 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14496 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k92A/info/1k92A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1k92A/nostruct-align/1k92A.t06-thin90.a2m.gz, have 119704 columns in 508 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i4jA/nostruct-align/1i4jA.t06-thin90.a2m.gz # 1i4jA.t06-thin90.a2m with 458 sequences, total weight= 48.7054 avg weight= 0.106344 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30039 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i4jA/info/1i4jA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1i4jA/nostruct-align/1i4jA.t06-thin90.a2m.gz, have 119814 columns in 509 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q3oA/nostruct-align/1q3oA.t06-thin90.a2m.gz # 1q3oA.t06-thin90.a2m with 1896 sequences, total weight= 1896 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.179 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q3oA/info/1q3oA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1q3oA/nostruct-align/1q3oA.t06-thin90.a2m.gz, have 119918 columns in 510 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1euvA/nostruct-align/1euvA.t06-thin90.a2m.gz # 1euvA.t06-thin90.a2m with 607 sequences, total weight= 607 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.96402 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1euvA/info/1euvA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1euvA/nostruct-align/1euvA.t06-thin90.a2m.gz, have 120139 columns in 511 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d3gA/nostruct-align/1d3gA.t06-thin90.a2m.gz # 1d3gA.t06-thin90.a2m with 2785 sequences, total weight= 2785 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00851 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d3gA/info/1d3gA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1d3gA/nostruct-align/1d3gA.t06-thin90.a2m.gz, have 120499 columns in 512 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uufA/nostruct-align/1uufA.t06-thin90.a2m.gz # 1uufA.t06-thin90.a2m with 5018 sequences, total weight= 5018 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17623 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uufA/info/1uufA.stride-mixed.n_notor WARNING: skipping h, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1u/1uufA/nostruct-align/1uufA.t06-thin90.a2m.gz, have 120838 columns in 513 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wmaA/nostruct-align/1wmaA.t06-thin90.a2m.gz # 1wmaA.t06-thin90.a2m with 13019 sequences, total weight= 13019 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02591 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wmaA/info/1wmaA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1wmaA/nostruct-align/1wmaA.t06-thin90.a2m.gz, have 121113 columns in 514 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qveA/nostruct-align/1qveA.t06-thin90.a2m.gz # 1qveA.t06-thin90.a2m with 242 sequences, total weight= 91.9277 avg weight= 0.379866 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30115 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qveA/info/1qveA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qveA/nostruct-align/1qveA.t06-thin90.a2m.gz, have 121239 columns in 515 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qazA/nostruct-align/1qazA.t06-thin90.a2m.gz # 1qazA.t06-thin90.a2m with 77 sequences, total weight= 77 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01236 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qazA/info/1qazA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qazA/nostruct-align/1qazA.t06-thin90.a2m.gz, have 121590 columns in 516 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cczA/nostruct-align/1cczA.t06-thin90.a2m.gz # 1cczA.t06-thin90.a2m with 5697 sequences, total weight= 5697 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.902865 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cczA/info/1cczA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1c/1cczA/nostruct-align/1cczA.t06-thin90.a2m.gz, have 121761 columns in 517 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p0zA/nostruct-align/1p0zA.t06-thin90.a2m.gz # 1p0zA.t06-thin90.a2m with 96 sequences, total weight= 29.3156 avg weight= 0.305371 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p0zA/info/1p0zA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1p0zA/nostruct-align/1p0zA.t06-thin90.a2m.gz, have 121892 columns in 518 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n9eA/nostruct-align/1n9eA.t06-thin90.a2m.gz # 1n9eA.t06-thin90.a2m with 177 sequences, total weight= 76.4566 avg weight= 0.431958 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n9eA/info/1n9eA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1n9eA/nostruct-align/1n9eA.t06-thin90.a2m.gz, have 122627 columns in 519 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l8bA/nostruct-align/1l8bA.t06-thin90.a2m.gz # 1l8bA.t06-thin90.a2m with 190 sequences, total weight= 116.977 avg weight= 0.615666 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30166 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l8bA/info/1l8bA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1l8bA/nostruct-align/1l8bA.t06-thin90.a2m.gz, have 122804 columns in 520 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vkeA/nostruct-align/1vkeA.t06-thin90.a2m.gz # 1vkeA.t06-thin90.a2m with 778 sequences, total weight= 778 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04759 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vkeA/info/1vkeA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vkeA/nostruct-align/1vkeA.t06-thin90.a2m.gz, have 122921 columns in 521 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t06-thin90.a2m.gz # 1b8oA.t06-thin90.a2m with 933 sequences, total weight= 933 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08459 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b8oA/info/1b8oA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t06-thin90.a2m.gz, have 123201 columns in 522 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vcaA/nostruct-align/1vcaA.t06-thin90.a2m.gz # 1vcaA.t06-thin90.a2m with 10369 sequences, total weight= 10369 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.846261 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vcaA/info/1vcaA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vcaA/nostruct-align/1vcaA.t06-thin90.a2m.gz, have 123400 columns in 523 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qq9A/nostruct-align/1qq9A.t06-thin90.a2m.gz # 1qq9A.t06-thin90.a2m with 3091 sequences, total weight= 3091 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.913488 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qq9A/info/1qq9A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qq9A/nostruct-align/1qq9A.t06-thin90.a2m.gz, have 123677 columns in 524 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xkrA/nostruct-align/1xkrA.t06-thin90.a2m.gz # 1xkrA.t06-thin90.a2m with 231 sequences, total weight= 231 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14575 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xkrA/info/1xkrA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xkrA/nostruct-align/1xkrA.t06-thin90.a2m.gz, have 123882 columns in 525 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uasA/nostruct-align/1uasA.t06-thin90.a2m.gz # 1uasA.t06-thin90.a2m with 491 sequences, total weight= 491 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.991111 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uasA/info/1uasA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1uasA/nostruct-align/1uasA.t06-thin90.a2m.gz, have 124244 columns in 526 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y9lA/nostruct-align/1y9lA.t06-thin90.a2m.gz # 1y9lA.t06-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.616166 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y9lA/info/1y9lA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1y9lA/nostruct-align/1y9lA.t06-thin90.a2m.gz, have 124354 columns in 527 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hyvA/nostruct-align/1hyvA.t06-thin90.a2m.gz # 1hyvA.t06-thin90.a2m with 421 sequences, total weight= 120.323 avg weight= 0.285803 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30108 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hyvA/info/1hyvA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1hyvA/nostruct-align/1hyvA.t06-thin90.a2m.gz, have 124498 columns in 528 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uxy/nostruct-align/1uxy.t06-thin90.a2m.gz # 1uxy.t06-thin90.a2m with 1903 sequences, total weight= 1903 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1303 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uxy/info/1uxy.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1uxy/nostruct-align/1uxy.t06-thin90.a2m.gz, have 124838 columns in 529 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1avwB/nostruct-align/1avwB.t06-thin90.a2m.gz # 1avwB.t06-thin90.a2m with 151 sequences, total weight= 51.1655 avg weight= 0.338845 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1avwB/info/1avwB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1a/1avwB/nostruct-align/1avwB.t06-thin90.a2m.gz, have 125009 columns in 530 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xszA/nostruct-align/1xszA.t06-thin90.a2m.gz # 1xszA.t06-thin90.a2m with 278 sequences, total weight= 278 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20001 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xszA/info/1xszA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xszA/nostruct-align/1xszA.t06-thin90.a2m.gz, have 125365 columns in 531 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e43A/nostruct-align/1e43A.t06-thin90.a2m.gz # 1e43A.t06-thin90.a2m with 2536 sequences, total weight= 2536 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01371 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e43A/info/1e43A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1e43A/nostruct-align/1e43A.t06-thin90.a2m.gz, have 125848 columns in 532 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fxoA/nostruct-align/1fxoA.t06-thin90.a2m.gz # 1fxoA.t06-thin90.a2m with 3422 sequences, total weight= 3422 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09348 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fxoA/info/1fxoA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1fxoA/nostruct-align/1fxoA.t06-thin90.a2m.gz, have 126140 columns in 533 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q52A/nostruct-align/1q52A.t06-thin90.a2m.gz # 1q52A.t06-thin90.a2m with 3126 sequences, total weight= 3126 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16153 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q52A/info/1q52A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1q52A/nostruct-align/1q52A.t06-thin90.a2m.gz, have 126409 columns in 534 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mnaA/nostruct-align/1mnaA.t06-thin90.a2m.gz # 1mnaA.t06-thin90.a2m with 11576 sequences, total weight= 11576 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.954893 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mnaA/info/1mnaA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mnaA/nostruct-align/1mnaA.t06-thin90.a2m.gz, have 126685 columns in 535 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mugA/nostruct-align/1mugA.t06-thin90.a2m.gz # 1mugA.t06-thin90.a2m with 541 sequences, total weight= 541 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20084 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mugA/info/1mugA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mugA/nostruct-align/1mugA.t06-thin90.a2m.gz, have 126850 columns in 536 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1suuA/nostruct-align/1suuA.t06-thin90.a2m.gz # 1suuA.t06-thin90.a2m with 448 sequences, total weight= 99.7561 avg weight= 0.22267 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30407 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1suuA/info/1suuA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1suuA/nostruct-align/1suuA.t06-thin90.a2m.gz, have 127143 columns in 537 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nf9A/nostruct-align/1nf9A.t06-thin90.a2m.gz # 1nf9A.t06-thin90.a2m with 1022 sequences, total weight= 1022 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07235 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nf9A/info/1nf9A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nf9A/nostruct-align/1nf9A.t06-thin90.a2m.gz, have 127350 columns in 538 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bgf/nostruct-align/1bgf.t06-thin90.a2m.gz # 1bgf.t06-thin90.a2m with 56 sequences, total weight= 21.4 avg weight= 0.382143 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bgf/info/1bgf.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1b/1bgf/nostruct-align/1bgf.t06-thin90.a2m.gz, have 127474 columns in 539 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ugiA/nostruct-align/1ugiA.t06-thin90.a2m.gz # 1ugiA.t06-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.584933 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ugiA/info/1ugiA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1ugiA/nostruct-align/1ugiA.t06-thin90.a2m.gz, have 127557 columns in 540 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y0uA/nostruct-align/1y0uA.t06-thin90.a2m.gz # 1y0uA.t06-thin90.a2m with 1005 sequences, total weight= 1005 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25751 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y0uA/info/1y0uA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1y0uA/nostruct-align/1y0uA.t06-thin90.a2m.gz, have 127646 columns in 541 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y66A/nostruct-align/1y66A.t06-thin90.a2m.gz # 1y66A.t06-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.514604 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y66A/info/1y66A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1y66A/nostruct-align/1y66A.t06-thin90.a2m.gz, have 127696 columns in 542 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wdpA/nostruct-align/1wdpA.t06-thin90.a2m.gz # 1wdpA.t06-thin90.a2m with 63 sequences, total weight= 29.7586 avg weight= 0.472358 37 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wdpA/info/1wdpA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1wdpA/nostruct-align/1wdpA.t06-thin90.a2m.gz, have 128189 columns in 543 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bkaA/nostruct-align/2bkaA.t06-thin90.a2m.gz # 2bkaA.t06-thin90.a2m with 16013 sequences, total weight= 16013 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.911472 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bkaA/info/2bkaA.stride-mixed.n_notor WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/2b/2bkaA/nostruct-align/2bkaA.t06-thin90.a2m.gz, have 128420 columns in 544 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bjqA/nostruct-align/2bjqA.t06-thin90.a2m.gz # 2bjqA.t06-thin90.a2m with 13 sequences, total weight= 6.19642 avg weight= 0.476648 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bjqA/info/2bjqA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2b/2bjqA/nostruct-align/2bjqA.t06-thin90.a2m.gz, have 128760 columns in 545 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sw5A/nostruct-align/1sw5A.t06-thin90.a2m.gz # 1sw5A.t06-thin90.a2m with 486 sequences, total weight= 486 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21974 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sw5A/info/1sw5A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1sw5A/nostruct-align/1sw5A.t06-thin90.a2m.gz, have 129030 columns in 546 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mqkL/nostruct-align/1mqkL.t06-thin90.a2m.gz # 1mqkL.t06-thin90.a2m with 10268 sequences, total weight= 22.3221 avg weight= 0.00217395 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mqkL/info/1mqkL.stride-mixed.n_notor WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1m/1mqkL/nostruct-align/1mqkL.t06-thin90.a2m.gz, have 129138 columns in 547 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vk1A/nostruct-align/1vk1A.t06-thin90.a2m.gz # 1vk1A.t06-thin90.a2m with 95 sequences, total weight= 95 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10364 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vk1A/info/1vk1A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vk1A/nostruct-align/1vk1A.t06-thin90.a2m.gz, have 129370 columns in 548 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xk7A/nostruct-align/1xk7A.t06-thin90.a2m.gz # 1xk7A.t06-thin90.a2m with 1069 sequences, total weight= 199.422 avg weight= 0.18655 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31561 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xk7A/info/1xk7A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xk7A/nostruct-align/1xk7A.t06-thin90.a2m.gz, have 129777 columns in 549 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2t/2trxA/nostruct-align/2trxA.t06-thin90.a2m.gz # 2trxA.t06-thin90.a2m with 4073 sequences, total weight= 4073 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03247 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2t/2trxA/info/2trxA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2t/2trxA/nostruct-align/2trxA.t06-thin90.a2m.gz, have 129885 columns in 550 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bjfA/nostruct-align/2bjfA.t06-thin90.a2m.gz # 2bjfA.t06-thin90.a2m with 253 sequences, total weight= 253 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14757 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bjfA/info/2bjfA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2b/2bjfA/nostruct-align/2bjfA.t06-thin90.a2m.gz, have 130213 columns in 551 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sqgA/nostruct-align/1sqgA.t06-thin90.a2m.gz # 1sqgA.t06-thin90.a2m with 5286 sequences, total weight= 5286 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.890236 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sqgA/info/1sqgA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1sqgA/nostruct-align/1sqgA.t06-thin90.a2m.gz, have 130637 columns in 552 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tvgA/nostruct-align/1tvgA.t06-thin90.a2m.gz # 1tvgA.t06-thin90.a2m with 12 sequences, total weight= 7.17245 avg weight= 0.597704 19 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tvgA/info/1tvgA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1tvgA/nostruct-align/1tvgA.t06-thin90.a2m.gz, have 130773 columns in 553 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h4xA/nostruct-align/1h4xA.t06-thin90.a2m.gz # 1h4xA.t06-thin90.a2m with 113 sequences, total weight= 113 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16431 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h4xA/info/1h4xA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1h4xA/nostruct-align/1h4xA.t06-thin90.a2m.gz, have 130884 columns in 554 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v4pA/nostruct-align/1v4pA.t06-thin90.a2m.gz # 1v4pA.t06-thin90.a2m with 891 sequences, total weight= 159.247 avg weight= 0.178729 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31374 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v4pA/info/1v4pA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1v4pA/nostruct-align/1v4pA.t06-thin90.a2m.gz, have 131035 columns in 555 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vclA/nostruct-align/1vclA.t06-thin90.a2m.gz # 1vclA.t06-thin90.a2m with 435 sequences, total weight= 199.121 avg weight= 0.457748 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30053 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vclA/info/1vclA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vclA/nostruct-align/1vclA.t06-thin90.a2m.gz, have 131467 columns in 556 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w1hA/nostruct-align/1w1hA.t06-thin90.a2m.gz # 1w1hA.t06-thin90.a2m with 170 sequences, total weight= 170 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10486 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w1hA/info/1w1hA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1w1hA/nostruct-align/1w1hA.t06-thin90.a2m.gz, have 131614 columns in 557 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ihjA/nostruct-align/1ihjA.t06-thin90.a2m.gz # 1ihjA.t06-thin90.a2m with 1671 sequences, total weight= 1671 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24538 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ihjA/info/1ihjA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1ihjA/nostruct-align/1ihjA.t06-thin90.a2m.gz, have 131708 columns in 558 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r62A/nostruct-align/1r62A.t06-thin90.a2m.gz # 1r62A.t06-thin90.a2m with 9715 sequences, total weight= 9715 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20091 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r62A/info/1r62A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1r62A/nostruct-align/1r62A.t06-thin90.a2m.gz, have 131844 columns in 559 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y0bA/nostruct-align/1y0bA.t06-thin90.a2m.gz # 1y0bA.t06-thin90.a2m with 2234 sequences, total weight= 2234 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03246 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y0bA/info/1y0bA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1y0bA/nostruct-align/1y0bA.t06-thin90.a2m.gz, have 132037 columns in 560 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nofA/nostruct-align/1nofA.t06-thin90.a2m.gz # 1nofA.t06-thin90.a2m with 718 sequences, total weight= 718 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.807317 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nofA/info/1nofA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nofA/nostruct-align/1nofA.t06-thin90.a2m.gz, have 132420 columns in 561 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ykiA/nostruct-align/1ykiA.t06-thin90.a2m.gz # 1ykiA.t06-thin90.a2m with 1285 sequences, total weight= 1285 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.98789 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ykiA/info/1ykiA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1ykiA/nostruct-align/1ykiA.t06-thin90.a2m.gz, have 132636 columns in 562 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g3p/nostruct-align/1g3p.t06-thin90.a2m.gz # 1g3p.t06-thin90.a2m with 1168 sequences, total weight= 131.828 avg weight= 0.112866 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30282 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g3p/info/1g3p.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1g3p/nostruct-align/1g3p.t06-thin90.a2m.gz, have 132828 columns in 563 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vdwA/nostruct-align/1vdwA.t06-thin90.a2m.gz # 1vdwA.t06-thin90.a2m with 1291 sequences, total weight= 1291 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1947 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vdwA/info/1vdwA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vdwA/nostruct-align/1vdwA.t06-thin90.a2m.gz, have 133076 columns in 564 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h2cA/nostruct-align/1h2cA.t06-thin90.a2m.gz # 1h2cA.t06-thin90.a2m with 3 sequences, total weight= 2.6571 avg weight= 0.885699 8 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h2cA/info/1h2cA.stride-mixed.n_notor WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1h/1h2cA/nostruct-align/1h2cA.t06-thin90.a2m.gz, have 133200 columns in 565 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vhuA/nostruct-align/1vhuA.t06-thin90.a2m.gz # 1vhuA.t06-thin90.a2m with 384 sequences, total weight= 384 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1924 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vhuA/info/1vhuA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vhuA/nostruct-align/1vhuA.t06-thin90.a2m.gz, have 133392 columns in 566 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1ju2A/nostruct-align/1ju2A.t06-thin90.a2m.gz # 1ju2A.t06-thin90.a2m with 4595 sequences, total weight= 4595 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.843658 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1ju2A/info/1ju2A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1ju2A/nostruct-align/1ju2A.t06-thin90.a2m.gz, have 133913 columns in 567 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ysqA/nostruct-align/1ysqA.t06-thin90.a2m.gz # 1ysqA.t06-thin90.a2m with 984 sequences, total weight= 984 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13967 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ysqA/info/1ysqA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1ysqA/nostruct-align/1ysqA.t06-thin90.a2m.gz, have 134094 columns in 568 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t9iA/nostruct-align/1t9iA.t06-thin90.a2m.gz # 1t9iA.t06-thin90.a2m with 441 sequences, total weight= 441 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04545 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t9iA/info/1t9iA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1t9iA/nostruct-align/1t9iA.t06-thin90.a2m.gz, have 134247 columns in 569 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d2sA/nostruct-align/1d2sA.t06-thin90.a2m.gz # 1d2sA.t06-thin90.a2m with 1328 sequences, total weight= 1328 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.9909 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d2sA/info/1d2sA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1d2sA/nostruct-align/1d2sA.t06-thin90.a2m.gz, have 134417 columns in 570 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oh4A/nostruct-align/1oh4A.t06-thin90.a2m.gz # 1oh4A.t06-thin90.a2m with 15 sequences, total weight= 9.69727 avg weight= 0.646484 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oh4A/info/1oh4A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1oh4A/nostruct-align/1oh4A.t06-thin90.a2m.gz, have 134591 columns in 571 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ok0A/nostruct-align/1ok0A.t06-thin90.a2m.gz # 1ok0A.t06-thin90.a2m with 8 sequences, total weight= 3.99964 avg weight= 0.499954 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ok0A/info/1ok0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1ok0A/nostruct-align/1ok0A.t06-thin90.a2m.gz, have 134665 columns in 572 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1thfD/nostruct-align/1thfD.t06-thin90.a2m.gz # 1thfD.t06-thin90.a2m with 1064 sequences, total weight= 1064 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1813 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1thfD/info/1thfD.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1thfD/nostruct-align/1thfD.t06-thin90.a2m.gz, have 134918 columns in 573 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/7a/7a3hA/nostruct-align/7a3hA.t06-thin90.a2m.gz # 7a3hA.t06-thin90.a2m with 2657 sequences, total weight= 2657 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.822362 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/7a/7a3hA/info/7a3hA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/7a/7a3hA/nostruct-align/7a3hA.t06-thin90.a2m.gz, have 135218 columns in 574 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ejxC/nostruct-align/1ejxC.t06-thin90.a2m.gz # 1ejxC.t06-thin90.a2m with 3097 sequences, total weight= 3097 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24358 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ejxC/info/1ejxC.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1ejxC/nostruct-align/1ejxC.t06-thin90.a2m.gz, have 135774 columns in 575 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tfe/nostruct-align/1tfe.t06-thin90.a2m.gz # 1tfe.t06-thin90.a2m with 537 sequences, total weight= 49.7682 avg weight= 0.0926782 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30071 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tfe/info/1tfe.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1tfe/nostruct-align/1tfe.t06-thin90.a2m.gz, have 135916 columns in 576 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f94A/nostruct-align/1f94A.t06-thin90.a2m.gz # 1f94A.t06-thin90.a2m with 2 sequences, total weight= 1.94772 avg weight= 0.973858 6 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f94A/info/1f94A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1f94A/nostruct-align/1f94A.t06-thin90.a2m.gz, have 135979 columns in 577 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kr4A/nostruct-align/1kr4A.t06-thin90.a2m.gz # 1kr4A.t06-thin90.a2m with 189 sequences, total weight= 28.753 avg weight= 0.152132 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kr4A/info/1kr4A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kr4A/nostruct-align/1kr4A.t06-thin90.a2m.gz, have 136089 columns in 578 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ryoA/nostruct-align/1ryoA.t06-thin90.a2m.gz # 1ryoA.t06-thin90.a2m with 288 sequences, total weight= 102.545 avg weight= 0.356058 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30159 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ryoA/info/1ryoA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1ryoA/nostruct-align/1ryoA.t06-thin90.a2m.gz, have 136413 columns in 579 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bu8A/nostruct-align/1bu8A.t06-thin90.a2m.gz # 1bu8A.t06-thin90.a2m with 6715 sequences, total weight= 6715 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04111 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bu8A/info/1bu8A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1b/1bu8A/nostruct-align/1bu8A.t06-thin90.a2m.gz, have 136859 columns in 580 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rw1A/nostruct-align/1rw1A.t06-thin90.a2m.gz # 1rw1A.t06-thin90.a2m with 525 sequences, total weight= 81.917 avg weight= 0.156032 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30433 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rw1A/info/1rw1A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rw1A/nostruct-align/1rw1A.t06-thin90.a2m.gz, have 136973 columns in 581 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y4wA/nostruct-align/1y4wA.t06-thin90.a2m.gz # 1y4wA.t06-thin90.a2m with 483 sequences, total weight= 483 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19356 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y4wA/info/1y4wA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1y4wA/nostruct-align/1y4wA.t06-thin90.a2m.gz, have 137490 columns in 582 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j24A/nostruct-align/1j24A.t06-thin90.a2m.gz # 1j24A.t06-thin90.a2m with 146 sequences, total weight= 88.4917 avg weight= 0.606108 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30118 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j24A/info/1j24A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1j24A/nostruct-align/1j24A.t06-thin90.a2m.gz, have 137623 columns in 583 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hxhA/nostruct-align/1hxhA.t06-thin90.a2m.gz # 1hxhA.t06-thin90.a2m with 12225 sequences, total weight= 12225 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16474 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hxhA/info/1hxhA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1hxhA/nostruct-align/1hxhA.t06-thin90.a2m.gz, have 137876 columns in 584 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f32A/nostruct-align/1f32A.t06-thin90.a2m.gz # 1f32A.t06-thin90.a2m with 15 sequences, total weight= 8.43676 avg weight= 0.56245 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f32A/info/1f32A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1f32A/nostruct-align/1f32A.t06-thin90.a2m.gz, have 138003 columns in 585 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jhgA/nostruct-align/1jhgA.t06-thin90.a2m.gz # 1jhgA.t06-thin90.a2m with 68 sequences, total weight= 23.6715 avg weight= 0.348111 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jhgA/info/1jhgA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jhgA/nostruct-align/1jhgA.t06-thin90.a2m.gz, have 138104 columns in 586 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r0uA/nostruct-align/1r0uA.t06-thin90.a2m.gz # 1r0uA.t06-thin90.a2m with 53 sequences, total weight= 53 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26162 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r0uA/info/1r0uA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1r0uA/nostruct-align/1r0uA.t06-thin90.a2m.gz, have 138246 columns in 587 chains # command:CPU_time= 2327.77 sec, elapsed time= 2349.85 sec) # command:# command:# Prefix for input files set to /projects/compbio/experiments/protein-predict/predict-2nd/testing/training-data/ # command:# reading script from file dunbrack-30pc-1763-1.t06-thin90-n_notor # Prefix for input files set to # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ed8A/nostruct-align/1ed8A.t06-thin90.a2m.gz # 1ed8A.t06-thin90.a2m with 1019 sequences, total weight= 1019 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03693 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ed8A/info/1ed8A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1ed8A/nostruct-align/1ed8A.t06-thin90.a2m.gz, have 449 columns in 1 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gdm/nostruct-align/2gdm.t06-thin90.a2m.gz # 2gdm.t06-thin90.a2m with 1054 sequences, total weight= 1054 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17382 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gdm/info/2gdm.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2g/2gdm/nostruct-align/2gdm.t06-thin90.a2m.gz, have 602 columns in 2 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iukA/nostruct-align/1iukA.t06-thin90.a2m.gz # 1iukA.t06-thin90.a2m with 515 sequences, total weight= 151.844 avg weight= 0.294842 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30714 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iukA/info/1iukA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1iukA/nostruct-align/1iukA.t06-thin90.a2m.gz, have 738 columns in 3 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1senA/nostruct-align/1senA.t06-thin90.a2m.gz # 1senA.t06-thin90.a2m with 3566 sequences, total weight= 3566 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.962494 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1senA/info/1senA.stride-mixed.n_notor WARNING: skipping g, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1s/1senA/nostruct-align/1senA.t06-thin90.a2m.gz, have 872 columns in 4 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rm6B/nostruct-align/1rm6B.t06-thin90.a2m.gz # 1rm6B.t06-thin90.a2m with 471 sequences, total weight= 129.145 avg weight= 0.274192 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30262 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rm6B/info/1rm6B.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rm6B/nostruct-align/1rm6B.t06-thin90.a2m.gz, have 1195 columns in 5 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jtvA/nostruct-align/1jtvA.t06-thin90.a2m.gz # 1jtvA.t06-thin90.a2m with 13890 sequences, total weight= 13890 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0157 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jtvA/info/1jtvA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jtvA/nostruct-align/1jtvA.t06-thin90.a2m.gz, have 1473 columns in 6 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g5aA/nostruct-align/1g5aA.t06-thin90.a2m.gz # 1g5aA.t06-thin90.a2m with 2451 sequences, total weight= 2451 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08418 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g5aA/info/1g5aA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1g5aA/nostruct-align/1g5aA.t06-thin90.a2m.gz, have 2101 columns in 7 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ro0A/nostruct-align/1ro0A.t06-thin90.a2m.gz # 1ro0A.t06-thin90.a2m with 87 sequences, total weight= 87 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06249 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ro0A/info/1ro0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1ro0A/nostruct-align/1ro0A.t06-thin90.a2m.gz, have 2311 columns in 8 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xg0C/nostruct-align/1xg0C.t06-thin90.a2m.gz # 1xg0C.t06-thin90.a2m with 317 sequences, total weight= 45.1868 avg weight= 0.142545 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xg0C/info/1xg0C.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xg0C/nostruct-align/1xg0C.t06-thin90.a2m.gz, have 2485 columns in 9 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k2eA/nostruct-align/1k2eA.t06-thin90.a2m.gz # 1k2eA.t06-thin90.a2m with 3420 sequences, total weight= 3420 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.852709 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k2eA/info/1k2eA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1k2eA/nostruct-align/1k2eA.t06-thin90.a2m.gz, have 2637 columns in 10 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1km4A/nostruct-align/1km4A.t06-thin90.a2m.gz # 1km4A.t06-thin90.a2m with 1012 sequences, total weight= 1012 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23514 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1km4A/info/1km4A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1km4A/nostruct-align/1km4A.t06-thin90.a2m.gz, have 2849 columns in 11 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cex/nostruct-align/1cex.t06-thin90.a2m.gz # 1cex.t06-thin90.a2m with 520 sequences, total weight= 520 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.976616 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cex/info/1cex.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1c/1cex/nostruct-align/1cex.t06-thin90.a2m.gz, have 3046 columns in 12 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qqfA/nostruct-align/1qqfA.t06-thin90.a2m.gz # 1qqfA.t06-thin90.a2m with 592 sequences, total weight= 592 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14935 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qqfA/info/1qqfA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qqfA/nostruct-align/1qqfA.t06-thin90.a2m.gz, have 3323 columns in 13 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gd0A/nostruct-align/1gd0A.t06-thin90.a2m.gz # 1gd0A.t06-thin90.a2m with 134 sequences, total weight= 134 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27315 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gd0A/info/1gd0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gd0A/nostruct-align/1gd0A.t06-thin90.a2m.gz, have 3441 columns in 14 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r77A/nostruct-align/1r77A.t06-thin90.a2m.gz # 1r77A.t06-thin90.a2m with 20 sequences, total weight= 10.5215 avg weight= 0.526073 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r77A/info/1r77A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1r77A/nostruct-align/1r77A.t06-thin90.a2m.gz, have 3540 columns in 15 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x82A/nostruct-align/1x82A.t06-thin90.a2m.gz # 1x82A.t06-thin90.a2m with 1274 sequences, total weight= 1274 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.859938 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x82A/info/1x82A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1x82A/nostruct-align/1x82A.t06-thin90.a2m.gz, have 3730 columns in 16 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1atzA/nostruct-align/1atzA.t06-thin90.a2m.gz # 1atzA.t06-thin90.a2m with 1826 sequences, total weight= 1826 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02896 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1atzA/info/1atzA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1a/1atzA/nostruct-align/1atzA.t06-thin90.a2m.gz, have 3914 columns in 17 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v9yA/nostruct-align/1v9yA.t06-thin90.a2m.gz # 1v9yA.t06-thin90.a2m with 7075 sequences, total weight= 7075 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27676 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v9yA/info/1v9yA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1v9yA/nostruct-align/1v9yA.t06-thin90.a2m.gz, have 4017 columns in 18 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ocyA/nostruct-align/1ocyA.t06-thin90.a2m.gz # 1ocyA.t06-thin90.a2m with 209 sequences, total weight= 209 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.235 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ocyA/info/1ocyA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1ocyA/nostruct-align/1ocyA.t06-thin90.a2m.gz, have 4215 columns in 19 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fobA/nostruct-align/1fobA.t06-thin90.a2m.gz # 1fobA.t06-thin90.a2m with 2194 sequences, total weight= 2194 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.821557 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fobA/info/1fobA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1fobA/nostruct-align/1fobA.t06-thin90.a2m.gz, have 4549 columns in 20 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dwkA/nostruct-align/1dwkA.t06-thin90.a2m.gz # 1dwkA.t06-thin90.a2m with 79 sequences, total weight= 11.0813 avg weight= 0.14027 31 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dwkA/info/1dwkA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1dwkA/nostruct-align/1dwkA.t06-thin90.a2m.gz, have 4705 columns in 21 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ugpB/nostruct-align/1ugpB.t06-thin90.a2m.gz # 1ugpB.t06-thin90.a2m with 74 sequences, total weight= 29.1606 avg weight= 0.394061 37 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ugpB/info/1ugpB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1ugpB/nostruct-align/1ugpB.t06-thin90.a2m.gz, have 4931 columns in 22 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ijbA/nostruct-align/1ijbA.t06-thin90.a2m.gz # 1ijbA.t06-thin90.a2m with 2261 sequences, total weight= 2261 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.935163 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ijbA/info/1ijbA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1ijbA/nostruct-align/1ijbA.t06-thin90.a2m.gz, have 5133 columns in 23 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lqvA/nostruct-align/1lqvA.t06-thin90.a2m.gz # 1lqvA.t06-thin90.a2m with 472 sequences, total weight= 137.43 avg weight= 0.291164 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30099 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lqvA/info/1lqvA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1lqvA/nostruct-align/1lqvA.t06-thin90.a2m.gz, have 5305 columns in 24 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xodA/nostruct-align/1xodA.t06-thin90.a2m.gz # 1xodA.t06-thin90.a2m with 66 sequences, total weight= 12.008 avg weight= 0.181939 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xodA/info/1xodA.stride-mixed.n_notor WARNING: skipping b, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1x/1xodA/nostruct-align/1xodA.t06-thin90.a2m.gz, have 5410 columns in 25 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cc8A/nostruct-align/1cc8A.t06-thin90.a2m.gz # 1cc8A.t06-thin90.a2m with 571 sequences, total weight= 98.1645 avg weight= 0.171917 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3107 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cc8A/info/1cc8A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1c/1cc8A/nostruct-align/1cc8A.t06-thin90.a2m.gz, have 5482 columns in 26 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wqjB/nostruct-align/1wqjB.t06-thin90.a2m.gz # 1wqjB.t06-thin90.a2m with 99 sequences, total weight= 23.8235 avg weight= 0.240642 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wqjB/info/1wqjB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1wqjB/nostruct-align/1wqjB.t06-thin90.a2m.gz, have 5562 columns in 27 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1on2A/nostruct-align/1on2A.t06-thin90.a2m.gz # 1on2A.t06-thin90.a2m with 633 sequences, total weight= 633 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03457 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1on2A/info/1on2A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1on2A/nostruct-align/1on2A.t06-thin90.a2m.gz, have 5697 columns in 28 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f3uA/nostruct-align/1f3uA.t06-thin90.a2m.gz # 1f3uA.t06-thin90.a2m with 38 sequences, total weight= 24.6711 avg weight= 0.649239 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f3uA/info/1f3uA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1f3uA/nostruct-align/1f3uA.t06-thin90.a2m.gz, have 5815 columns in 29 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rqpA/nostruct-align/1rqpA.t06-thin90.a2m.gz # 1rqpA.t06-thin90.a2m with 105 sequences, total weight= 32.3629 avg weight= 0.308218 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rqpA/info/1rqpA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rqpA/nostruct-align/1rqpA.t06-thin90.a2m.gz, have 6106 columns in 30 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vpt/nostruct-align/1vpt.t06-thin90.a2m.gz # 1vpt.t06-thin90.a2m with 31 sequences, total weight= 14.506 avg weight= 0.467935 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vpt/info/1vpt.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vpt/nostruct-align/1vpt.t06-thin90.a2m.gz, have 6397 columns in 31 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p4cA/nostruct-align/1p4cA.t06-thin90.a2m.gz # 1p4cA.t06-thin90.a2m with 3082 sequences, total weight= 3082 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.98534 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p4cA/info/1p4cA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1p4cA/nostruct-align/1p4cA.t06-thin90.a2m.gz, have 6750 columns in 32 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s5dA/nostruct-align/1s5dA.t06-thin90.a2m.gz # 1s5dA.t06-thin90.a2m with 37 sequences, total weight= 37 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27671 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s5dA/info/1s5dA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1s5dA/nostruct-align/1s5dA.t06-thin90.a2m.gz, have 6968 columns in 33 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m40A/nostruct-align/1m40A.t06-thin90.a2m.gz # 1m40A.t06-thin90.a2m with 1008 sequences, total weight= 1008 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06189 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m40A/info/1m40A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1m40A/nostruct-align/1m40A.t06-thin90.a2m.gz, have 7231 columns in 34 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p5fA/nostruct-align/1p5fA.t06-thin90.a2m.gz # 1p5fA.t06-thin90.a2m with 1583 sequences, total weight= 1583 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12897 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p5fA/info/1p5fA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1p5fA/nostruct-align/1p5fA.t06-thin90.a2m.gz, have 7417 columns in 35 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a7s/nostruct-align/1a7s.t06-thin90.a2m.gz # 1a7s.t06-thin90.a2m with 3273 sequences, total weight= 2232.48 avg weight= 0.68209 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31186 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a7s/info/1a7s.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1a/1a7s/nostruct-align/1a7s.t06-thin90.a2m.gz, have 7638 columns in 36 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i58A/nostruct-align/1i58A.t06-thin90.a2m.gz # 1i58A.t06-thin90.a2m with 9194 sequences, total weight= 9194 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19667 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i58A/info/1i58A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1i58A/nostruct-align/1i58A.t06-thin90.a2m.gz, have 7827 columns in 37 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uujA/nostruct-align/1uujA.t06-thin90.a2m.gz # 1uujA.t06-thin90.a2m with 32 sequences, total weight= 9.32285 avg weight= 0.291339 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uujA/info/1uujA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1uujA/nostruct-align/1uujA.t06-thin90.a2m.gz, have 7903 columns in 38 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v8yA/nostruct-align/1v8yA.t06-thin90.a2m.gz # 1v8yA.t06-thin90.a2m with 3451 sequences, total weight= 3451 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.846054 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v8yA/info/1v8yA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1v8yA/nostruct-align/1v8yA.t06-thin90.a2m.gz, have 8053 columns in 39 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1usmA/nostruct-align/1usmA.t06-thin90.a2m.gz # 1usmA.t06-thin90.a2m with 269 sequences, total weight= 32.1943 avg weight= 0.119681 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1usmA/info/1usmA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1usmA/nostruct-align/1usmA.t06-thin90.a2m.gz, have 8130 columns in 40 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fr2B/nostruct-align/1fr2B.t06-thin90.a2m.gz # 1fr2B.t06-thin90.a2m with 28 sequences, total weight= 5.94812 avg weight= 0.212433 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fr2B/info/1fr2B.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1fr2B/nostruct-align/1fr2B.t06-thin90.a2m.gz, have 8261 columns in 41 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d2vA/nostruct-align/1d2vA.t06-thin90.a2m.gz # 1d2vA.t06-thin90.a2m with 127 sequences, total weight= 28.4432 avg weight= 0.223962 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d2vA/info/1d2vA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1d2vA/nostruct-align/1d2vA.t06-thin90.a2m.gz, have 8365 columns in 42 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dz3A/nostruct-align/1dz3A.t06-thin90.a2m.gz # 1dz3A.t06-thin90.a2m with 13417 sequences, total weight= 13417 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2446 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dz3A/info/1dz3A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1dz3A/nostruct-align/1dz3A.t06-thin90.a2m.gz, have 8488 columns in 43 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o2dA/nostruct-align/1o2dA.t06-thin90.a2m.gz # 1o2dA.t06-thin90.a2m with 1352 sequences, total weight= 1352 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19044 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o2dA/info/1o2dA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1o2dA/nostruct-align/1o2dA.t06-thin90.a2m.gz, have 8847 columns in 44 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qu9A/nostruct-align/1qu9A.t06-thin90.a2m.gz # 1qu9A.t06-thin90.a2m with 1124 sequences, total weight= 578.303 avg weight= 0.514504 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31447 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qu9A/info/1qu9A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qu9A/nostruct-align/1qu9A.t06-thin90.a2m.gz, have 8974 columns in 45 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rqwA/nostruct-align/1rqwA.t06-thin90.a2m.gz # 1rqwA.t06-thin90.a2m with 218 sequences, total weight= 23.9766 avg weight= 0.109984 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rqwA/info/1rqwA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rqwA/nostruct-align/1rqwA.t06-thin90.a2m.gz, have 9181 columns in 46 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m9xC/nostruct-align/1m9xC.t06-thin90.a2m.gz # 1m9xC.t06-thin90.a2m with 275 sequences, total weight= 12.9966 avg weight= 0.0472603 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m9xC/info/1m9xC.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1m9xC/nostruct-align/1m9xC.t06-thin90.a2m.gz, have 9327 columns in 47 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ruwA/nostruct-align/1ruwA.t06-thin90.a2m.gz # 1ruwA.t06-thin90.a2m with 2000 sequences, total weight= 2000 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2695 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ruwA/info/1ruwA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1ruwA/nostruct-align/1ruwA.t06-thin90.a2m.gz, have 9396 columns in 48 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p5zB/nostruct-align/1p5zB.t06-thin90.a2m.gz # 1p5zB.t06-thin90.a2m with 4755 sequences, total weight= 4755 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.803211 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p5zB/info/1p5zB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1p5zB/nostruct-align/1p5zB.t06-thin90.a2m.gz, have 9625 columns in 49 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1khxA/nostruct-align/1khxA.t06-thin90.a2m.gz # 1khxA.t06-thin90.a2m with 100 sequences, total weight= 29.2318 avg weight= 0.292318 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1khxA/info/1khxA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1khxA/nostruct-align/1khxA.t06-thin90.a2m.gz, have 9828 columns in 50 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hbnC/nostruct-align/1hbnC.t06-thin90.a2m.gz # 1hbnC.t06-thin90.a2m with 19 sequences, total weight= 3.3694 avg weight= 0.177337 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hbnC/info/1hbnC.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1hbnC/nostruct-align/1hbnC.t06-thin90.a2m.gz, have 10075 columns in 51 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bm8/nostruct-align/1bm8.t06-thin90.a2m.gz # 1bm8.t06-thin90.a2m with 62 sequences, total weight= 17.4628 avg weight= 0.281658 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bm8/info/1bm8.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1b/1bm8/nostruct-align/1bm8.t06-thin90.a2m.gz, have 10174 columns in 52 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nlrA/nostruct-align/2nlrA.t06-thin90.a2m.gz # 2nlrA.t06-thin90.a2m with 91 sequences, total weight= 35.2786 avg weight= 0.387677 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nlrA/info/2nlrA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2n/2nlrA/nostruct-align/2nlrA.t06-thin90.a2m.gz, have 10396 columns in 53 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uebA/nostruct-align/1uebA.t06-thin90.a2m.gz # 1uebA.t06-thin90.a2m with 375 sequences, total weight= 27.4744 avg weight= 0.0732652 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uebA/info/1uebA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1uebA/nostruct-align/1uebA.t06-thin90.a2m.gz, have 10580 columns in 54 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dytA/nostruct-align/1dytA.t06-thin90.a2m.gz # 1dytA.t06-thin90.a2m with 204 sequences, total weight= 35.4502 avg weight= 0.173776 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dytA/info/1dytA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1dytA/nostruct-align/1dytA.t06-thin90.a2m.gz, have 10713 columns in 55 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rreA/nostruct-align/1rreA.t06-thin90.a2m.gz # 1rreA.t06-thin90.a2m with 644 sequences, total weight= 114.414 avg weight= 0.177661 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30848 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rreA/info/1rreA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rreA/nostruct-align/1rreA.t06-thin90.a2m.gz, have 10895 columns in 56 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iwlA/nostruct-align/1iwlA.t06-thin90.a2m.gz # 1iwlA.t06-thin90.a2m with 314 sequences, total weight= 314 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0248 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iwlA/info/1iwlA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1iwlA/nostruct-align/1iwlA.t06-thin90.a2m.gz, have 11072 columns in 57 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2biiA/nostruct-align/2biiA.t06-thin90.a2m.gz # 2biiA.t06-thin90.a2m with 432 sequences, total weight= 134.66 avg weight= 0.311713 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30081 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2biiA/info/2biiA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2b/2biiA/nostruct-align/2biiA.t06-thin90.a2m.gz, have 11487 columns in 58 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1evyA/nostruct-align/1evyA.t06-thin90.a2m.gz # 1evyA.t06-thin90.a2m with 1596 sequences, total weight= 1596 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.940487 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1evyA/info/1evyA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1evyA/nostruct-align/1evyA.t06-thin90.a2m.gz, have 11833 columns in 59 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2p/2pvbA/nostruct-align/2pvbA.t06-thin90.a2m.gz # 2pvbA.t06-thin90.a2m with 1869 sequences, total weight= 1869 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21678 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2p/2pvbA/info/2pvbA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2p/2pvbA/nostruct-align/2pvbA.t06-thin90.a2m.gz, have 11940 columns in 60 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jcdA/nostruct-align/1jcdA.t06-thin90.a2m.gz # 1jcdA.t06-thin90.a2m with 10 sequences, total weight= 4.67726 avg weight= 0.467726 12 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jcdA/info/1jcdA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jcdA/nostruct-align/1jcdA.t06-thin90.a2m.gz, have 11990 columns in 61 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a2pA/nostruct-align/1a2pA.t06-thin90.a2m.gz # 1a2pA.t06-thin90.a2m with 54 sequences, total weight= 15.2622 avg weight= 0.282633 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a2pA/info/1a2pA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1a/1a2pA/nostruct-align/1a2pA.t06-thin90.a2m.gz, have 12098 columns in 62 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fn9A/nostruct-align/1fn9A.t06-thin90.a2m.gz # 1fn9A.t06-thin90.a2m with 11 sequences, total weight= 8.96845 avg weight= 0.815314 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fn9A/info/1fn9A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1fn9A/nostruct-align/1fn9A.t06-thin90.a2m.gz, have 12463 columns in 63 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rfyA/nostruct-align/1rfyA.t06-thin90.a2m.gz # 1rfyA.t06-thin90.a2m with 3 sequences, total weight= 2.20191 avg weight= 0.733971 8 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rfyA/info/1rfyA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rfyA/nostruct-align/1rfyA.t06-thin90.a2m.gz, have 12552 columns in 64 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n1jB/nostruct-align/1n1jB.t06-thin90.a2m.gz # 1n1jB.t06-thin90.a2m with 120 sequences, total weight= 22.7916 avg weight= 0.18993 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n1jB/info/1n1jB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1n1jB/nostruct-align/1n1jB.t06-thin90.a2m.gz, have 12630 columns in 65 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y0yA/nostruct-align/1y0yA.t06-thin90.a2m.gz # 1y0yA.t06-thin90.a2m with 2743 sequences, total weight= 2743 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.937241 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y0yA/info/1y0yA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1y0yA/nostruct-align/1y0yA.t06-thin90.a2m.gz, have 12965 columns in 66 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j27A/nostruct-align/1j27A.t06-thin90.a2m.gz # 1j27A.t06-thin90.a2m with 64 sequences, total weight= 23.1152 avg weight= 0.361175 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j27A/info/1j27A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1j27A/nostruct-align/1j27A.t06-thin90.a2m.gz, have 13063 columns in 67 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g12A/nostruct-align/1g12A.t06-thin90.a2m.gz # 1g12A.t06-thin90.a2m with 74 sequences, total weight= 74 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26603 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g12A/info/1g12A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1g12A/nostruct-align/1g12A.t06-thin90.a2m.gz, have 13230 columns in 68 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1ng6A/nostruct-align/1ng6A.t06-thin90.a2m.gz # 1ng6A.t06-thin90.a2m with 236 sequences, total weight= 21.1423 avg weight= 0.0895861 43 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1ng6A/info/1ng6A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1ng6A/nostruct-align/1ng6A.t06-thin90.a2m.gz, have 13378 columns in 69 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q7zA/nostruct-align/1q7zA.t06-thin90.a2m.gz # 1q7zA.t06-thin90.a2m with 838 sequences, total weight= 255.266 avg weight= 0.304613 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30743 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q7zA/info/1q7zA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1q7zA/nostruct-align/1q7zA.t06-thin90.a2m.gz, have 13937 columns in 70 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ybkA/nostruct-align/1ybkA.t06-thin90.a2m.gz # 1ybkA.t06-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.59493 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ybkA/info/1ybkA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1ybkA/nostruct-align/1ybkA.t06-thin90.a2m.gz, have 13989 columns in 71 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nc5A/nostruct-align/1nc5A.t06-thin90.a2m.gz # 1nc5A.t06-thin90.a2m with 289 sequences, total weight= 289 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.978334 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nc5A/info/1nc5A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nc5A/nostruct-align/1nc5A.t06-thin90.a2m.gz, have 14352 columns in 72 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1llmC/nostruct-align/1llmC.t06-thin90.a2m.gz # 1llmC.t06-thin90.a2m with 14310 sequences, total weight= 2401.81 avg weight= 0.167841 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.35794 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1llmC/info/1llmC.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1llmC/nostruct-align/1llmC.t06-thin90.a2m.gz, have 14439 columns in 73 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1su8A/nostruct-align/1su8A.t06-thin90.a2m.gz # 1su8A.t06-thin90.a2m with 179 sequences, total weight= 50.5193 avg weight= 0.282231 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1su8A/info/1su8A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1su8A/nostruct-align/1su8A.t06-thin90.a2m.gz, have 15072 columns in 74 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mba/nostruct-align/1mba.t06-thin90.a2m.gz # 1mba.t06-thin90.a2m with 1015 sequences, total weight= 1015 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23879 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mba/info/1mba.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mba/nostruct-align/1mba.t06-thin90.a2m.gz, have 15218 columns in 75 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tjxA/nostruct-align/1tjxA.t06-thin90.a2m.gz # 1tjxA.t06-thin90.a2m with 2588 sequences, total weight= 2588 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.893172 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tjxA/info/1tjxA.stride-mixed.n_notor WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1t/1tjxA/nostruct-align/1tjxA.t06-thin90.a2m.gz, have 15374 columns in 76 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n8vA/nostruct-align/1n8vA.t06-thin90.a2m.gz # 1n8vA.t06-thin90.a2m with 140 sequences, total weight= 18.8439 avg weight= 0.1346 42 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n8vA/info/1n8vA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1n8vA/nostruct-align/1n8vA.t06-thin90.a2m.gz, have 15475 columns in 77 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f1uA/nostruct-align/1f1uA.t06-thin90.a2m.gz # 1f1uA.t06-thin90.a2m with 2215 sequences, total weight= 2215 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.952836 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f1uA/info/1f1uA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1f1uA/nostruct-align/1f1uA.t06-thin90.a2m.gz, have 15797 columns in 78 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tqjA/nostruct-align/1tqjA.t06-thin90.a2m.gz # 1tqjA.t06-thin90.a2m with 1207 sequences, total weight= 1207 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12704 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tqjA/info/1tqjA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1tqjA/nostruct-align/1tqjA.t06-thin90.a2m.gz, have 16014 columns in 79 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oneA/nostruct-align/1oneA.t06-thin90.a2m.gz # 1oneA.t06-thin90.a2m with 674 sequences, total weight= 39.9626 avg weight= 0.0592917 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oneA/info/1oneA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1oneA/nostruct-align/1oneA.t06-thin90.a2m.gz, have 16450 columns in 80 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gskA/nostruct-align/1gskA.t06-thin90.a2m.gz # 1gskA.t06-thin90.a2m with 1095 sequences, total weight= 1095 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07305 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gskA/info/1gskA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gskA/nostruct-align/1gskA.t06-thin90.a2m.gz, have 16952 columns in 81 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j3aA/nostruct-align/1j3aA.t06-thin90.a2m.gz # 1j3aA.t06-thin90.a2m with 430 sequences, total weight= 44.1324 avg weight= 0.102633 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j3aA/info/1j3aA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1j3aA/nostruct-align/1j3aA.t06-thin90.a2m.gz, have 17081 columns in 82 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dgwA/nostruct-align/1dgwA.t06-thin90.a2m.gz # 1dgwA.t06-thin90.a2m with 572 sequences, total weight= 572 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17796 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dgwA/info/1dgwA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1dgwA/nostruct-align/1dgwA.t06-thin90.a2m.gz, have 17259 columns in 83 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w50A/nostruct-align/1w50A.t06-thin90.a2m.gz # 1w50A.t06-thin90.a2m with 1120 sequences, total weight= 1120 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11337 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w50A/info/1w50A.stride-mixed.n_notor WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1w/1w50A/nostruct-align/1w50A.t06-thin90.a2m.gz, have 17636 columns in 84 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gx5A/nostruct-align/1gx5A.t06-thin90.a2m.gz # 1gx5A.t06-thin90.a2m with 272 sequences, total weight= 142.493 avg weight= 0.523871 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30073 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gx5A/info/1gx5A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gx5A/nostruct-align/1gx5A.t06-thin90.a2m.gz, have 18166 columns in 85 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mun/nostruct-align/1mun.t06-thin90.a2m.gz # 1mun.t06-thin90.a2m with 1140 sequences, total weight= 1140 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18335 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mun/info/1mun.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mun/nostruct-align/1mun.t06-thin90.a2m.gz, have 18391 columns in 86 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54B/nostruct-align/1v54B.t06-thin90.a2m.gz # 1v54B.t06-thin90.a2m with 1999 sequences, total weight= 70.3823 avg weight= 0.0352088 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30225 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54B/info/1v54B.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1v54B/nostruct-align/1v54B.t06-thin90.a2m.gz, have 18618 columns in 87 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1owlA/nostruct-align/1owlA.t06-thin90.a2m.gz # 1owlA.t06-thin90.a2m with 668 sequences, total weight= 668 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24828 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1owlA/info/1owlA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1owlA/nostruct-align/1owlA.t06-thin90.a2m.gz, have 19091 columns in 88 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rrmA/nostruct-align/1rrmA.t06-thin90.a2m.gz # 1rrmA.t06-thin90.a2m with 1347 sequences, total weight= 1347 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17413 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rrmA/info/1rrmA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rrmA/nostruct-align/1rrmA.t06-thin90.a2m.gz, have 19476 columns in 89 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d0dA/nostruct-align/1d0dA.t06-thin90.a2m.gz # 1d0dA.t06-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20764 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d0dA/info/1d0dA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1d0dA/nostruct-align/1d0dA.t06-thin90.a2m.gz, have 19536 columns in 90 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ibyA/nostruct-align/1ibyA.t06-thin90.a2m.gz # 1ibyA.t06-thin90.a2m with 4 sequences, total weight= 2.05371 avg weight= 0.513427 9 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ibyA/info/1ibyA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1ibyA/nostruct-align/1ibyA.t06-thin90.a2m.gz, have 19648 columns in 91 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o82A/nostruct-align/1o82A.t06-thin90.a2m.gz # 1o82A.t06-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.634682 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o82A/info/1o82A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1o82A/nostruct-align/1o82A.t06-thin90.a2m.gz, have 19718 columns in 92 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1brt/nostruct-align/1brt.t06-thin90.a2m.gz # 1brt.t06-thin90.a2m with 9794 sequences, total weight= 9794 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.689554 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1brt/info/1brt.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1b/1brt/nostruct-align/1brt.t06-thin90.a2m.gz, have 19995 columns in 93 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oqqA/nostruct-align/1oqqA.t06-thin90.a2m.gz # 1oqqA.t06-thin90.a2m with 638 sequences, total weight= 496.449 avg weight= 0.778134 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30497 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oqqA/info/1oqqA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1oqqA/nostruct-align/1oqqA.t06-thin90.a2m.gz, have 20101 columns in 94 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nrjB/nostruct-align/1nrjB.t06-thin90.a2m.gz # 1nrjB.t06-thin90.a2m with 8721 sequences, total weight= 8721 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05463 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nrjB/info/1nrjB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nrjB/nostruct-align/1nrjB.t06-thin90.a2m.gz, have 20292 columns in 95 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1behA/nostruct-align/1behA.t06-thin90.a2m.gz # 1behA.t06-thin90.a2m with 443 sequences, total weight= 443 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23988 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1behA/info/1behA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1b/1behA/nostruct-align/1behA.t06-thin90.a2m.gz, have 20476 columns in 96 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gvjA/nostruct-align/1gvjA.t06-thin90.a2m.gz # 1gvjA.t06-thin90.a2m with 282 sequences, total weight= 54.8354 avg weight= 0.194452 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30191 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gvjA/info/1gvjA.stride-mixed.n_notor WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1g/1gvjA/nostruct-align/1gvjA.t06-thin90.a2m.gz, have 20617 columns in 97 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sgwA/nostruct-align/1sgwA.t06-thin90.a2m.gz # 1sgwA.t06-thin90.a2m with 18705 sequences, total weight= 526.895 avg weight= 0.0281687 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.40152 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sgwA/info/1sgwA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1sgwA/nostruct-align/1sgwA.t06-thin90.a2m.gz, have 20817 columns in 98 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nkiA/nostruct-align/1nkiA.t06-thin90.a2m.gz # 1nkiA.t06-thin90.a2m with 3640 sequences, total weight= 3640 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.853906 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nkiA/info/1nkiA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nkiA/nostruct-align/1nkiA.t06-thin90.a2m.gz, have 20951 columns in 99 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tfzA/nostruct-align/1tfzA.t06-thin90.a2m.gz # 1tfzA.t06-thin90.a2m with 919 sequences, total weight= 919 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16459 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tfzA/info/1tfzA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1tfzA/nostruct-align/1tfzA.t06-thin90.a2m.gz, have 21315 columns in 100 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rv9A/nostruct-align/1rv9A.t06-thin90.a2m.gz # 1rv9A.t06-thin90.a2m with 312 sequences, total weight= 49.3097 avg weight= 0.158044 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30076 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rv9A/info/1rv9A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rv9A/nostruct-align/1rv9A.t06-thin90.a2m.gz, have 21557 columns in 101 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ypyA/nostruct-align/1ypyA.t06-thin90.a2m.gz # 1ypyA.t06-thin90.a2m with 32 sequences, total weight= 13.5446 avg weight= 0.42327 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ypyA/info/1ypyA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1ypyA/nostruct-align/1ypyA.t06-thin90.a2m.gz, have 21739 columns in 102 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mg7A/nostruct-align/1mg7A.t06-thin90.a2m.gz # 1mg7A.t06-thin90.a2m with 5 sequences, total weight= 3.68133 avg weight= 0.736265 10 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mg7A/info/1mg7A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mg7A/nostruct-align/1mg7A.t06-thin90.a2m.gz, have 22090 columns in 103 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1us5A/nostruct-align/1us5A.t06-thin90.a2m.gz # 1us5A.t06-thin90.a2m with 4352 sequences, total weight= 4352 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.800377 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1us5A/info/1us5A.stride-mixed.n_notor WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1u/1us5A/nostruct-align/1us5A.t06-thin90.a2m.gz, have 22387 columns in 104 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1ctf/nostruct-align/1ctf.t06-thin90.a2m.gz # 1ctf.t06-thin90.a2m with 357 sequences, total weight= 8.40394 avg weight= 0.0235405 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1ctf/info/1ctf.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1c/1ctf/nostruct-align/1ctf.t06-thin90.a2m.gz, have 22455 columns in 105 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gai/nostruct-align/1gai.t06-thin90.a2m.gz # 1gai.t06-thin90.a2m with 279 sequences, total weight= 279 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20027 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gai/info/1gai.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gai/nostruct-align/1gai.t06-thin90.a2m.gz, have 22927 columns in 106 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jsdB/nostruct-align/1jsdB.t06-thin90.a2m.gz # 1jsdB.t06-thin90.a2m with 49 sequences, total weight= 6.58441 avg weight= 0.134376 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jsdB/info/1jsdB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jsdB/nostruct-align/1jsdB.t06-thin90.a2m.gz, have 23087 columns in 107 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e9gA/nostruct-align/1e9gA.t06-thin90.a2m.gz # 1e9gA.t06-thin90.a2m with 354 sequences, total weight= 65.9128 avg weight= 0.186194 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e9gA/info/1e9gA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1e9gA/nostruct-align/1e9gA.t06-thin90.a2m.gz, have 23371 columns in 108 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lucA/nostruct-align/1lucA.t06-thin90.a2m.gz # 1lucA.t06-thin90.a2m with 1355 sequences, total weight= 1355 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12321 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lucA/info/1lucA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1lucA/nostruct-align/1lucA.t06-thin90.a2m.gz, have 23697 columns in 109 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mtyG/nostruct-align/1mtyG.t06-thin90.a2m.gz # 1mtyG.t06-thin90.a2m with 8 sequences, total weight= 4.32487 avg weight= 0.540609 15 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mtyG/info/1mtyG.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mtyG/nostruct-align/1mtyG.t06-thin90.a2m.gz, have 23859 columns in 110 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s5aA/nostruct-align/1s5aA.t06-thin90.a2m.gz # 1s5aA.t06-thin90.a2m with 1033 sequences, total weight= 1033 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.883189 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s5aA/info/1s5aA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1s5aA/nostruct-align/1s5aA.t06-thin90.a2m.gz, have 23998 columns in 111 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1ntvA/nostruct-align/1ntvA.t06-thin90.a2m.gz # 1ntvA.t06-thin90.a2m with 342 sequences, total weight= 342 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0869 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1ntvA/info/1ntvA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1ntvA/nostruct-align/1ntvA.t06-thin90.a2m.gz, have 24150 columns in 112 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h1nA/nostruct-align/1h1nA.t06-thin90.a2m.gz # 1h1nA.t06-thin90.a2m with 2180 sequences, total weight= 2180 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.837585 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h1nA/info/1h1nA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1h1nA/nostruct-align/1h1nA.t06-thin90.a2m.gz, have 24455 columns in 113 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sx7A/nostruct-align/1sx7A.t06-thin90.a2m.gz # 1sx7A.t06-thin90.a2m with 184 sequences, total weight= 184 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2731 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sx7A/info/1sx7A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1sx7A/nostruct-align/1sx7A.t06-thin90.a2m.gz, have 24619 columns in 114 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s29A/nostruct-align/1s29A.t06-thin90.a2m.gz # 1s29A.t06-thin90.a2m with 162 sequences, total weight= 36.0861 avg weight= 0.222754 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s29A/info/1s29A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1s29A/nostruct-align/1s29A.t06-thin90.a2m.gz, have 24711 columns in 115 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f8mA/nostruct-align/1f8mA.t06-thin90.a2m.gz # 1f8mA.t06-thin90.a2m with 457 sequences, total weight= 91.6073 avg weight= 0.200454 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30056 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f8mA/info/1f8mA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1f8mA/nostruct-align/1f8mA.t06-thin90.a2m.gz, have 25138 columns in 116 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1earA/nostruct-align/1earA.t06-thin90.a2m.gz # 1earA.t06-thin90.a2m with 130 sequences, total weight= 51.3111 avg weight= 0.3947 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30037 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1earA/info/1earA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1earA/nostruct-align/1earA.t06-thin90.a2m.gz, have 25280 columns in 117 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r9wA/nostruct-align/1r9wA.t06-thin90.a2m.gz # 1r9wA.t06-thin90.a2m with 95 sequences, total weight= 11.7816 avg weight= 0.124017 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r9wA/info/1r9wA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1r9wA/nostruct-align/1r9wA.t06-thin90.a2m.gz, have 25418 columns in 118 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1woqA/nostruct-align/1woqA.t06-thin90.a2m.gz # 1woqA.t06-thin90.a2m with 1366 sequences, total weight= 1366 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07136 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1woqA/info/1woqA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1woqA/nostruct-align/1woqA.t06-thin90.a2m.gz, have 25671 columns in 119 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xubA/nostruct-align/1xubA.t06-thin90.a2m.gz # 1xubA.t06-thin90.a2m with 808 sequences, total weight= 808 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17589 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xubA/info/1xubA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xubA/nostruct-align/1xubA.t06-thin90.a2m.gz, have 25949 columns in 120 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vimA/nostruct-align/1vimA.t06-thin90.a2m.gz # 1vimA.t06-thin90.a2m with 2109 sequences, total weight= 2109 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.981532 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vimA/info/1vimA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vimA/nostruct-align/1vimA.t06-thin90.a2m.gz, have 26141 columns in 121 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eluA/nostruct-align/1eluA.t06-thin90.a2m.gz # 1eluA.t06-thin90.a2m with 11056 sequences, total weight= 11056 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.839482 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eluA/info/1eluA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1eluA/nostruct-align/1eluA.t06-thin90.a2m.gz, have 26522 columns in 122 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m65A/nostruct-align/1m65A.t06-thin90.a2m.gz # 1m65A.t06-thin90.a2m with 1197 sequences, total weight= 1197 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.964033 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m65A/info/1m65A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1m65A/nostruct-align/1m65A.t06-thin90.a2m.gz, have 26756 columns in 123 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1whzA/nostruct-align/1whzA.t06-thin90.a2m.gz # 1whzA.t06-thin90.a2m with 120 sequences, total weight= 41.2652 avg weight= 0.343876 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1whzA/info/1whzA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1whzA/nostruct-align/1whzA.t06-thin90.a2m.gz, have 26826 columns in 124 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e2kA/nostruct-align/1e2kA.t06-thin90.a2m.gz # 1e2kA.t06-thin90.a2m with 741 sequences, total weight= 741 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05303 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e2kA/info/1e2kA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1e2kA/nostruct-align/1e2kA.t06-thin90.a2m.gz, have 27134 columns in 125 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cs6A/nostruct-align/1cs6A.t06-thin90.a2m.gz # 1cs6A.t06-thin90.a2m with 6047 sequences, total weight= 6047 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.885638 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cs6A/info/1cs6A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1c/1cs6A/nostruct-align/1cs6A.t06-thin90.a2m.gz, have 27516 columns in 126 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y0hA/nostruct-align/1y0hA.t06-thin90.a2m.gz # 1y0hA.t06-thin90.a2m with 572 sequences, total weight= 572 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.966099 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y0hA/info/1y0hA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1y0hA/nostruct-align/1y0hA.t06-thin90.a2m.gz, have 27617 columns in 127 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u7gA/nostruct-align/1u7gA.t06-thin90.a2m.gz # 1u7gA.t06-thin90.a2m with 705 sequences, total weight= 65.9411 avg weight= 0.0935334 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30121 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u7gA/info/1u7gA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1u7gA/nostruct-align/1u7gA.t06-thin90.a2m.gz, have 28000 columns in 128 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j2lA/nostruct-align/1j2lA.t06-thin90.a2m.gz # 1j2lA.t06-thin90.a2m with 282 sequences, total weight= 11.1835 avg weight= 0.0396576 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j2lA/info/1j2lA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1j2lA/nostruct-align/1j2lA.t06-thin90.a2m.gz, have 28068 columns in 129 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kaeA/nostruct-align/1kaeA.t06-thin90.a2m.gz # 1kaeA.t06-thin90.a2m with 3852 sequences, total weight= 1231.85 avg weight= 0.319794 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.33117 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kaeA/info/1kaeA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kaeA/nostruct-align/1kaeA.t06-thin90.a2m.gz, have 28502 columns in 130 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dfmA/nostruct-align/1dfmA.t06-thin90.a2m.gz # 1dfmA.t06-thin90.a2m with 9 sequences, total weight= 9 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23138 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dfmA/info/1dfmA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1dfmA/nostruct-align/1dfmA.t06-thin90.a2m.gz, have 28725 columns in 131 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k55A/nostruct-align/1k55A.t06-thin90.a2m.gz # 1k55A.t06-thin90.a2m with 2105 sequences, total weight= 2105 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12239 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k55A/info/1k55A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1k55A/nostruct-align/1k55A.t06-thin90.a2m.gz, have 28970 columns in 132 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uk8A/nostruct-align/1uk8A.t06-thin90.a2m.gz # 1uk8A.t06-thin90.a2m with 10277 sequences, total weight= 10277 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.686901 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uk8A/info/1uk8A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1uk8A/nostruct-align/1uk8A.t06-thin90.a2m.gz, have 29241 columns in 133 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hz6A/nostruct-align/1hz6A.t06-thin90.a2m.gz # 1hz6A.t06-thin90.a2m with 9 sequences, total weight= 2.72218 avg weight= 0.302464 11 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hz6A/info/1hz6A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1hz6A/nostruct-align/1hz6A.t06-thin90.a2m.gz, have 29308 columns in 134 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1inlA/nostruct-align/1inlA.t06-thin90.a2m.gz # 1inlA.t06-thin90.a2m with 10705 sequences, total weight= 10705 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.748412 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1inlA/info/1inlA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1inlA/nostruct-align/1inlA.t06-thin90.a2m.gz, have 29593 columns in 135 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uv7A/nostruct-align/1uv7A.t06-thin90.a2m.gz # 1uv7A.t06-thin90.a2m with 40 sequences, total weight= 12.3515 avg weight= 0.308787 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uv7A/info/1uv7A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1uv7A/nostruct-align/1uv7A.t06-thin90.a2m.gz, have 29669 columns in 136 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bo9B/nostruct-align/2bo9B.t06-thin90.a2m.gz # 2bo9B.t06-thin90.a2m with 16 sequences, total weight= 7.62958 avg weight= 0.476849 20 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bo9B/info/2bo9B.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2b/2bo9B/nostruct-align/2bo9B.t06-thin90.a2m.gz, have 29886 columns in 137 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cxqA/nostruct-align/1cxqA.t06-thin90.a2m.gz # 1cxqA.t06-thin90.a2m with 2758 sequences, total weight= 2758 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05621 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cxqA/info/1cxqA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1c/1cxqA/nostruct-align/1cxqA.t06-thin90.a2m.gz, have 30029 columns in 138 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bs0A/nostruct-align/1bs0A.t06-thin90.a2m.gz # 1bs0A.t06-thin90.a2m with 10806 sequences, total weight= 10806 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.848262 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bs0A/info/1bs0A.stride-mixed.n_notor WARNING: skipping b, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1b/1bs0A/nostruct-align/1bs0A.t06-thin90.a2m.gz, have 30411 columns in 139 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pfbA/nostruct-align/1pfbA.t06-thin90.a2m.gz # 1pfbA.t06-thin90.a2m with 262 sequences, total weight= 33.8854 avg weight= 0.129333 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pfbA/info/1pfbA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1pfbA/nostruct-align/1pfbA.t06-thin90.a2m.gz, have 30466 columns in 140 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3s/3sil/nostruct-align/3sil.t06-thin90.a2m.gz # 3sil.t06-thin90.a2m with 755 sequences, total weight= 755 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19171 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3s/3sil/info/3sil.stride-mixed.n_notor WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/3s/3sil/nostruct-align/3sil.t06-thin90.a2m.gz, have 30844 columns in 141 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vhwA/nostruct-align/1vhwA.t06-thin90.a2m.gz # 1vhwA.t06-thin90.a2m with 1175 sequences, total weight= 1175 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0046 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vhwA/info/1vhwA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vhwA/nostruct-align/1vhwA.t06-thin90.a2m.gz, have 31081 columns in 142 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xsvA/nostruct-align/1xsvA.t06-thin90.a2m.gz # 1xsvA.t06-thin90.a2m with 58 sequences, total weight= 15.046 avg weight= 0.259414 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xsvA/info/1xsvA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xsvA/nostruct-align/1xsvA.t06-thin90.a2m.gz, have 31187 columns in 143 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xqaA/nostruct-align/1xqaA.t06-thin90.a2m.gz # 1xqaA.t06-thin90.a2m with 3548 sequences, total weight= 3548 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.939056 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xqaA/info/1xqaA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xqaA/nostruct-align/1xqaA.t06-thin90.a2m.gz, have 31299 columns in 144 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ut1A/nostruct-align/1ut1A.t06-thin90.a2m.gz # 1ut1A.t06-thin90.a2m with 9 sequences, total weight= 5.51544 avg weight= 0.612826 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ut1A/info/1ut1A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1ut1A/nostruct-align/1ut1A.t06-thin90.a2m.gz, have 31439 columns in 145 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mr7A/nostruct-align/1mr7A.t06-thin90.a2m.gz # 1mr7A.t06-thin90.a2m with 2980 sequences, total weight= 2980 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0535 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mr7A/info/1mr7A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mr7A/nostruct-align/1mr7A.t06-thin90.a2m.gz, have 31642 columns in 146 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xkpA/nostruct-align/1xkpA.t06-thin90.a2m.gz # 1xkpA.t06-thin90.a2m with 43 sequences, total weight= 43 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28707 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xkpA/info/1xkpA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xkpA/nostruct-align/1xkpA.t06-thin90.a2m.gz, have 31873 columns in 147 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r89A/nostruct-align/1r89A.t06-thin90.a2m.gz # 1r89A.t06-thin90.a2m with 581 sequences, total weight= 581 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.944246 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r89A/info/1r89A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1r89A/nostruct-align/1r89A.t06-thin90.a2m.gz, have 32310 columns in 148 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gv9A/nostruct-align/1gv9A.t06-thin90.a2m.gz # 1gv9A.t06-thin90.a2m with 468 sequences, total weight= 468 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20777 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gv9A/info/1gv9A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gv9A/nostruct-align/1gv9A.t06-thin90.a2m.gz, have 32533 columns in 149 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1koe/nostruct-align/1koe.t06-thin90.a2m.gz # 1koe.t06-thin90.a2m with 49 sequences, total weight= 26.6645 avg weight= 0.544174 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1koe/info/1koe.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1koe/nostruct-align/1koe.t06-thin90.a2m.gz, have 32705 columns in 150 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mfgA/nostruct-align/1mfgA.t06-thin90.a2m.gz # 1mfgA.t06-thin90.a2m with 1673 sequences, total weight= 1673 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24937 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mfgA/info/1mfgA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mfgA/nostruct-align/1mfgA.t06-thin90.a2m.gz, have 32800 columns in 151 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wmhA/nostruct-align/1wmhA.t06-thin90.a2m.gz # 1wmhA.t06-thin90.a2m with 19 sequences, total weight= 5.41707 avg weight= 0.285109 20 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wmhA/info/1wmhA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1wmhA/nostruct-align/1wmhA.t06-thin90.a2m.gz, have 32883 columns in 152 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pv5A/nostruct-align/1pv5A.t06-thin90.a2m.gz # 1pv5A.t06-thin90.a2m with 48 sequences, total weight= 48 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12166 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pv5A/info/1pv5A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1pv5A/nostruct-align/1pv5A.t06-thin90.a2m.gz, have 33144 columns in 153 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1psrA/nostruct-align/1psrA.t06-thin90.a2m.gz # 1psrA.t06-thin90.a2m with 192 sequences, total weight= 73.8324 avg weight= 0.384544 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30084 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1psrA/info/1psrA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1psrA/nostruct-align/1psrA.t06-thin90.a2m.gz, have 33244 columns in 154 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vj2A/nostruct-align/1vj2A.t06-thin90.a2m.gz # 1vj2A.t06-thin90.a2m with 2881 sequences, total weight= 2881 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.827679 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vj2A/info/1vj2A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vj2A/nostruct-align/1vj2A.t06-thin90.a2m.gz, have 33358 columns in 155 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tjyA/nostruct-align/1tjyA.t06-thin90.a2m.gz # 1tjyA.t06-thin90.a2m with 3142 sequences, total weight= 3142 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.904742 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tjyA/info/1tjyA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1tjyA/nostruct-align/1tjyA.t06-thin90.a2m.gz, have 33674 columns in 156 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1smoA/nostruct-align/1smoA.t06-thin90.a2m.gz # 1smoA.t06-thin90.a2m with 474 sequences, total weight= 12.1582 avg weight= 0.0256502 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1smoA/info/1smoA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1smoA/nostruct-align/1smoA.t06-thin90.a2m.gz, have 33787 columns in 157 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kzfA/nostruct-align/1kzfA.t06-thin90.a2m.gz # 1kzfA.t06-thin90.a2m with 412 sequences, total weight= 412 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0385 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kzfA/info/1kzfA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kzfA/nostruct-align/1kzfA.t06-thin90.a2m.gz, have 33985 columns in 158 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nr0A/nostruct-align/1nr0A.t06-thin90.a2m.gz # 1nr0A.t06-thin90.a2m with 10028 sequences, total weight= 10028 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.731425 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nr0A/info/1nr0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nr0A/nostruct-align/1nr0A.t06-thin90.a2m.gz, have 34595 columns in 159 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vyrA/nostruct-align/1vyrA.t06-thin90.a2m.gz # 1vyrA.t06-thin90.a2m with 1012 sequences, total weight= 147.378 avg weight= 0.145631 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3125 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vyrA/info/1vyrA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vyrA/nostruct-align/1vyrA.t06-thin90.a2m.gz, have 34958 columns in 160 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nlnA/nostruct-align/1nlnA.t06-thin90.a2m.gz # 1nlnA.t06-thin90.a2m with 37 sequences, total weight= 6.68535 avg weight= 0.180685 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nlnA/info/1nlnA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nlnA/nostruct-align/1nlnA.t06-thin90.a2m.gz, have 35161 columns in 161 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hdhA/nostruct-align/1hdhA.t06-thin90.a2m.gz # 1hdhA.t06-thin90.a2m with 1822 sequences, total weight= 1822 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.933565 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hdhA/info/1hdhA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1hdhA/nostruct-align/1hdhA.t06-thin90.a2m.gz, have 35686 columns in 162 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vp6A/nostruct-align/1vp6A.t06-thin90.a2m.gz # 1vp6A.t06-thin90.a2m with 3171 sequences, total weight= 3171 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.914076 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vp6A/info/1vp6A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vp6A/nostruct-align/1vp6A.t06-thin90.a2m.gz, have 35819 columns in 163 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eb6A/nostruct-align/1eb6A.t06-thin90.a2m.gz # 1eb6A.t06-thin90.a2m with 70 sequences, total weight= 55.749 avg weight= 0.796414 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eb6A/info/1eb6A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1eb6A/nostruct-align/1eb6A.t06-thin90.a2m.gz, have 35996 columns in 164 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v5vA/nostruct-align/1v5vA.t06-thin90.a2m.gz # 1v5vA.t06-thin90.a2m with 943 sequences, total weight= 943 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21571 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v5vA/info/1v5vA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1v5vA/nostruct-align/1v5vA.t06-thin90.a2m.gz, have 36395 columns in 165 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yo3A/nostruct-align/1yo3A.t06-thin90.a2m.gz # 1yo3A.t06-thin90.a2m with 152 sequences, total weight= 42.4189 avg weight= 0.279072 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yo3A/info/1yo3A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1yo3A/nostruct-align/1yo3A.t06-thin90.a2m.gz, have 36480 columns in 166 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r9dA/nostruct-align/1r9dA.t06-thin90.a2m.gz # 1r9dA.t06-thin90.a2m with 203 sequences, total weight= 78.031 avg weight= 0.384389 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r9dA/info/1r9dA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1r9dA/nostruct-align/1r9dA.t06-thin90.a2m.gz, have 37266 columns in 167 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gk9B/nostruct-align/1gk9B.t06-thin90.a2m.gz # 1gk9B.t06-thin90.a2m with 198 sequences, total weight= 198 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2259 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gk9B/info/1gk9B.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gk9B/nostruct-align/1gk9B.t06-thin90.a2m.gz, have 37823 columns in 168 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x91A/nostruct-align/1x91A.t06-thin90.a2m.gz # 1x91A.t06-thin90.a2m with 272 sequences, total weight= 272 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01014 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x91A/info/1x91A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1x91A/nostruct-align/1x91A.t06-thin90.a2m.gz, have 37972 columns in 169 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l9lA/nostruct-align/1l9lA.t06-thin90.a2m.gz # 1l9lA.t06-thin90.a2m with 8 sequences, total weight= 5.24114 avg weight= 0.655142 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l9lA/info/1l9lA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1l9lA/nostruct-align/1l9lA.t06-thin90.a2m.gz, have 38046 columns in 170 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vlpA/nostruct-align/1vlpA.t06-thin90.a2m.gz # 1vlpA.t06-thin90.a2m with 365 sequences, total weight= 128.403 avg weight= 0.35179 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30288 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vlpA/info/1vlpA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vlpA/nostruct-align/1vlpA.t06-thin90.a2m.gz, have 38464 columns in 171 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vjuA/nostruct-align/1vjuA.t06-thin90.a2m.gz # 1vjuA.t06-thin90.a2m with 226 sequences, total weight= 9.34377 avg weight= 0.0413441 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vjuA/info/1vjuA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vjuA/nostruct-align/1vjuA.t06-thin90.a2m.gz, have 38755 columns in 172 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ogwA/nostruct-align/1ogwA.t06-thin90.a2m.gz # 1ogwA.t06-thin90.a2m with 476 sequences, total weight= 77.1759 avg weight= 0.162134 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30206 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ogwA/info/1ogwA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1ogwA/nostruct-align/1ogwA.t06-thin90.a2m.gz, have 38831 columns in 173 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r1tA/nostruct-align/1r1tA.t06-thin90.a2m.gz # 1r1tA.t06-thin90.a2m with 1756 sequences, total weight= 1756 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20242 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r1tA/info/1r1tA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1r1tA/nostruct-align/1r1tA.t06-thin90.a2m.gz, have 38929 columns in 174 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h03P/nostruct-align/1h03P.t06-thin90.a2m.gz # 1h03P.t06-thin90.a2m with 1817 sequences, total weight= 1817 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14615 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h03P/info/1h03P.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1h03P/nostruct-align/1h03P.t06-thin90.a2m.gz, have 39054 columns in 175 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w4xA/nostruct-align/1w4xA.t06-thin90.a2m.gz # 1w4xA.t06-thin90.a2m with 9878 sequences, total weight= 9878 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.942869 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w4xA/info/1w4xA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1w4xA/nostruct-align/1w4xA.t06-thin90.a2m.gz, have 39587 columns in 176 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vjpA/nostruct-align/1vjpA.t06-thin90.a2m.gz # 1vjpA.t06-thin90.a2m with 123 sequences, total weight= 26.45 avg weight= 0.215041 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vjpA/info/1vjpA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vjpA/nostruct-align/1vjpA.t06-thin90.a2m.gz, have 39969 columns in 177 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h6lA/nostruct-align/1h6lA.t06-thin90.a2m.gz # 1h6lA.t06-thin90.a2m with 104 sequences, total weight= 104 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14562 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h6lA/info/1h6lA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1h6lA/nostruct-align/1h6lA.t06-thin90.a2m.gz, have 40322 columns in 178 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oywA/nostruct-align/1oywA.t06-thin90.a2m.gz # 1oywA.t06-thin90.a2m with 8632 sequences, total weight= 8632 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.900048 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oywA/info/1oywA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1oywA/nostruct-align/1oywA.t06-thin90.a2m.gz, have 40838 columns in 179 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fp2A/nostruct-align/1fp2A.t06-thin90.a2m.gz # 1fp2A.t06-thin90.a2m with 8337 sequences, total weight= 8337 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.741428 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fp2A/info/1fp2A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1fp2A/nostruct-align/1fp2A.t06-thin90.a2m.gz, have 41183 columns in 180 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v9fA/nostruct-align/1v9fA.t06-thin90.a2m.gz # 1v9fA.t06-thin90.a2m with 1891 sequences, total weight= 1891 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20144 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v9fA/info/1v9fA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1v9fA/nostruct-align/1v9fA.t06-thin90.a2m.gz, have 41433 columns in 181 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qwgA/nostruct-align/1qwgA.t06-thin90.a2m.gz # 1qwgA.t06-thin90.a2m with 37 sequences, total weight= 15.5719 avg weight= 0.420862 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qwgA/info/1qwgA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qwgA/nostruct-align/1qwgA.t06-thin90.a2m.gz, have 41684 columns in 182 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f7lA/nostruct-align/1f7lA.t06-thin90.a2m.gz # 1f7lA.t06-thin90.a2m with 483 sequences, total weight= 483 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22431 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f7lA/info/1f7lA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1f7lA/nostruct-align/1f7lA.t06-thin90.a2m.gz, have 41802 columns in 183 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nbcA/nostruct-align/1nbcA.t06-thin90.a2m.gz # 1nbcA.t06-thin90.a2m with 84 sequences, total weight= 42.0806 avg weight= 0.500959 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nbcA/info/1nbcA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nbcA/nostruct-align/1nbcA.t06-thin90.a2m.gz, have 41957 columns in 184 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1my7A/nostruct-align/1my7A.t06-thin90.a2m.gz # 1my7A.t06-thin90.a2m with 80 sequences, total weight= 16.6143 avg weight= 0.207679 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1my7A/info/1my7A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1my7A/nostruct-align/1my7A.t06-thin90.a2m.gz, have 42064 columns in 185 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xu9A/nostruct-align/1xu9A.t06-thin90.a2m.gz # 1xu9A.t06-thin90.a2m with 13643 sequences, total weight= 13643 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02881 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xu9A/info/1xu9A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xu9A/nostruct-align/1xu9A.t06-thin90.a2m.gz, have 42333 columns in 186 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t6t1/nostruct-align/1t6t1.t06-thin90.a2m.gz # 1t6t1.t06-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.5933 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t6t1/info/1t6t1.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1t6t1/nostruct-align/1t6t1.t06-thin90.a2m.gz, have 42441 columns in 187 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ek6A/nostruct-align/1ek6A.t06-thin90.a2m.gz # 1ek6A.t06-thin90.a2m with 14186 sequences, total weight= 14186 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.917292 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ek6A/info/1ek6A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1ek6A/nostruct-align/1ek6A.t06-thin90.a2m.gz, have 42787 columns in 188 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ey4A/nostruct-align/1ey4A.t06-thin90.a2m.gz # 1ey4A.t06-thin90.a2m with 599 sequences, total weight= 599 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.145 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ey4A/info/1ey4A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1ey4A/nostruct-align/1ey4A.t06-thin90.a2m.gz, have 42923 columns in 189 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gvzA/nostruct-align/1gvzA.t06-thin90.a2m.gz # 1gvzA.t06-thin90.a2m with 3267 sequences, total weight= 3267 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2874 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gvzA/info/1gvzA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gvzA/nostruct-align/1gvzA.t06-thin90.a2m.gz, have 43160 columns in 190 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gz8A/nostruct-align/1gz8A.t06-thin90.a2m.gz # 1gz8A.t06-thin90.a2m with 12858 sequences, total weight= 12858 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12308 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gz8A/info/1gz8A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gz8A/nostruct-align/1gz8A.t06-thin90.a2m.gz, have 43451 columns in 191 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ynbA/nostruct-align/1ynbA.t06-thin90.a2m.gz # 1ynbA.t06-thin90.a2m with 264 sequences, total weight= 264 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20934 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ynbA/info/1ynbA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1ynbA/nostruct-align/1ynbA.t06-thin90.a2m.gz, have 43618 columns in 192 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nytA/nostruct-align/1nytA.t06-thin90.a2m.gz # 1nytA.t06-thin90.a2m with 869 sequences, total weight= 869 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2311 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nytA/info/1nytA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nytA/nostruct-align/1nytA.t06-thin90.a2m.gz, have 43889 columns in 193 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1evlA/nostruct-align/1evlA.t06-thin90.a2m.gz # 1evlA.t06-thin90.a2m with 2164 sequences, total weight= 2164 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13486 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1evlA/info/1evlA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1evlA/nostruct-align/1evlA.t06-thin90.a2m.gz, have 44290 columns in 194 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hyoA/nostruct-align/1hyoA.t06-thin90.a2m.gz # 1hyoA.t06-thin90.a2m with 1048 sequences, total weight= 302.602 avg weight= 0.288742 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30786 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hyoA/info/1hyoA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1hyoA/nostruct-align/1hyoA.t06-thin90.a2m.gz, have 44706 columns in 195 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mh1/nostruct-align/1mh1.t06-thin90.a2m.gz # 1mh1.t06-thin90.a2m with 4534 sequences, total weight= 4534 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1026 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mh1/info/1mh1.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mh1/nostruct-align/1mh1.t06-thin90.a2m.gz, have 44889 columns in 196 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qw9A/nostruct-align/1qw9A.t06-thin90.a2m.gz # 1qw9A.t06-thin90.a2m with 734 sequences, total weight= 734 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.815315 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qw9A/info/1qw9A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qw9A/nostruct-align/1qw9A.t06-thin90.a2m.gz, have 45386 columns in 197 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gtkA/nostruct-align/1gtkA.t06-thin90.a2m.gz # 1gtkA.t06-thin90.a2m with 398 sequences, total weight= 21.2421 avg weight= 0.0533721 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gtkA/info/1gtkA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gtkA/nostruct-align/1gtkA.t06-thin90.a2m.gz, have 45680 columns in 198 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hbnA/nostruct-align/1hbnA.t06-thin90.a2m.gz # 1hbnA.t06-thin90.a2m with 56 sequences, total weight= 5.32781 avg weight= 0.0951395 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hbnA/info/1hbnA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1hbnA/nostruct-align/1hbnA.t06-thin90.a2m.gz, have 46227 columns in 199 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kqpA/nostruct-align/1kqpA.t06-thin90.a2m.gz # 1kqpA.t06-thin90.a2m with 2487 sequences, total weight= 2487 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.973782 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kqpA/info/1kqpA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kqpA/nostruct-align/1kqpA.t06-thin90.a2m.gz, have 46498 columns in 200 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mb3A/nostruct-align/1mb3A.t06-thin90.a2m.gz # 1mb3A.t06-thin90.a2m with 13531 sequences, total weight= 13531 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25637 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mb3A/info/1mb3A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mb3A/nostruct-align/1mb3A.t06-thin90.a2m.gz, have 46615 columns in 201 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vqqA/nostruct-align/1vqqA.t06-thin90.a2m.gz # 1vqqA.t06-thin90.a2m with 1840 sequences, total weight= 1840 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17081 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vqqA/info/1vqqA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vqqA/nostruct-align/1vqqA.t06-thin90.a2m.gz, have 47250 columns in 202 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p1jA/nostruct-align/1p1jA.t06-thin90.a2m.gz # 1p1jA.t06-thin90.a2m with 128 sequences, total weight= 30.1896 avg weight= 0.235857 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p1jA/info/1p1jA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1p1jA/nostruct-align/1p1jA.t06-thin90.a2m.gz, have 47775 columns in 203 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/4u/4ubpB/nostruct-align/4ubpB.t06-thin90.a2m.gz # 4ubpB.t06-thin90.a2m with 170 sequences, total weight= 8.5199 avg weight= 0.050117 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/4u/4ubpB/info/4ubpB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/4u/4ubpB/nostruct-align/4ubpB.t06-thin90.a2m.gz, have 47897 columns in 204 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vhtA/nostruct-align/1vhtA.t06-thin90.a2m.gz # 1vhtA.t06-thin90.a2m with 4065 sequences, total weight= 4065 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.877067 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vhtA/info/1vhtA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vhtA/nostruct-align/1vhtA.t06-thin90.a2m.gz, have 48105 columns in 205 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nrzA/nostruct-align/1nrzA.t06-thin90.a2m.gz # 1nrzA.t06-thin90.a2m with 160 sequences, total weight= 30.3381 avg weight= 0.189613 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nrzA/info/1nrzA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nrzA/nostruct-align/1nrzA.t06-thin90.a2m.gz, have 48268 columns in 206 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kfcA/nostruct-align/1kfcA.t06-thin90.a2m.gz # 1kfcA.t06-thin90.a2m with 478 sequences, total weight= 334.131 avg weight= 0.699019 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3048 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kfcA/info/1kfcA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kfcA/nostruct-align/1kfcA.t06-thin90.a2m.gz, have 48522 columns in 207 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1ve2A/nostruct-align/1ve2A.t06-thin90.a2m.gz # 1ve2A.t06-thin90.a2m with 1678 sequences, total weight= 1678 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1575 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1ve2A/info/1ve2A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1ve2A/nostruct-align/1ve2A.t06-thin90.a2m.gz, have 48744 columns in 208 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hw1A/nostruct-align/1hw1A.t06-thin90.a2m.gz # 1hw1A.t06-thin90.a2m with 3519 sequences, total weight= 3519 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.938715 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hw1A/info/1hw1A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1hw1A/nostruct-align/1hw1A.t06-thin90.a2m.gz, have 48970 columns in 209 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k4iA/nostruct-align/1k4iA.t06-thin90.a2m.gz # 1k4iA.t06-thin90.a2m with 372 sequences, total weight= 15.9418 avg weight= 0.0428543 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k4iA/info/1k4iA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1k4iA/nostruct-align/1k4iA.t06-thin90.a2m.gz, have 49186 columns in 210 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w0hA/nostruct-align/1w0hA.t06-thin90.a2m.gz # 1w0hA.t06-thin90.a2m with 1509 sequences, total weight= 1509 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01523 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w0hA/info/1w0hA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1w0hA/nostruct-align/1w0hA.t06-thin90.a2m.gz, have 49386 columns in 211 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n0qA/nostruct-align/1n0qA.t06-thin90.a2m.gz # 1n0qA.t06-thin90.a2m with 9984 sequences, total weight= 9984 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19475 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n0qA/info/1n0qA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1n0qA/nostruct-align/1n0qA.t06-thin90.a2m.gz, have 49477 columns in 212 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1utg/nostruct-align/1utg.t06-thin90.a2m.gz # 1utg.t06-thin90.a2m with 14 sequences, total weight= 4.10303 avg weight= 0.293074 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1utg/info/1utg.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1utg/nostruct-align/1utg.t06-thin90.a2m.gz, have 49547 columns in 213 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jm1A/nostruct-align/1jm1A.t06-thin90.a2m.gz # 1jm1A.t06-thin90.a2m with 1194 sequences, total weight= 1194 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03377 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jm1A/info/1jm1A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jm1A/nostruct-align/1jm1A.t06-thin90.a2m.gz, have 49749 columns in 214 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fna/nostruct-align/1fna.t06-thin90.a2m.gz # 1fna.t06-thin90.a2m with 3992 sequences, total weight= 3992 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06736 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fna/info/1fna.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1fna/nostruct-align/1fna.t06-thin90.a2m.gz, have 49840 columns in 215 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k7cA/nostruct-align/1k7cA.t06-thin90.a2m.gz # 1k7cA.t06-thin90.a2m with 1463 sequences, total weight= 1463 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.798474 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k7cA/info/1k7cA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1k7cA/nostruct-align/1k7cA.t06-thin90.a2m.gz, have 50073 columns in 216 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t8kA/nostruct-align/1t8kA.t06-thin90.a2m.gz # 1t8kA.t06-thin90.a2m with 502 sequences, total weight= 48.2195 avg weight= 0.0960549 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30105 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t8kA/info/1t8kA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1t8kA/nostruct-align/1t8kA.t06-thin90.a2m.gz, have 50150 columns in 217 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1ml4A/nostruct-align/1ml4A.t06-thin90.a2m.gz # 1ml4A.t06-thin90.a2m with 820 sequences, total weight= 44.5229 avg weight= 0.0542963 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30066 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1ml4A/info/1ml4A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1ml4A/nostruct-align/1ml4A.t06-thin90.a2m.gz, have 50457 columns in 218 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ucsA/nostruct-align/1ucsA.t06-thin90.a2m.gz # 1ucsA.t06-thin90.a2m with 19 sequences, total weight= 4.6881 avg weight= 0.246742 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ucsA/info/1ucsA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1ucsA/nostruct-align/1ucsA.t06-thin90.a2m.gz, have 50521 columns in 219 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eg2A/nostruct-align/1eg2A.t06-thin90.a2m.gz # 1eg2A.t06-thin90.a2m with 765 sequences, total weight= 765 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.999993 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eg2A/info/1eg2A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1eg2A/nostruct-align/1eg2A.t06-thin90.a2m.gz, have 50791 columns in 220 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ymkA/nostruct-align/1ymkA.t06-thin90.a2m.gz # 1ymkA.t06-thin90.a2m with 2784 sequences, total weight= 2784 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.899711 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ymkA/info/1ymkA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1ymkA/nostruct-align/1ymkA.t06-thin90.a2m.gz, have 50962 columns in 221 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sdiA/nostruct-align/1sdiA.t06-thin90.a2m.gz # 1sdiA.t06-thin90.a2m with 62 sequences, total weight= 13.6424 avg weight= 0.220039 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sdiA/info/1sdiA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1sdiA/nostruct-align/1sdiA.t06-thin90.a2m.gz, have 51175 columns in 222 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n40A/nostruct-align/1n40A.t06-thin90.a2m.gz # 1n40A.t06-thin90.a2m with 5640 sequences, total weight= 5640 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01026 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n40A/info/1n40A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1n40A/nostruct-align/1n40A.t06-thin90.a2m.gz, have 51569 columns in 223 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e58A/nostruct-align/1e58A.t06-thin90.a2m.gz # 1e58A.t06-thin90.a2m with 1818 sequences, total weight= 1818 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.992746 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e58A/info/1e58A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1e58A/nostruct-align/1e58A.t06-thin90.a2m.gz, have 51816 columns in 224 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kq3A/nostruct-align/1kq3A.t06-thin90.a2m.gz # 1kq3A.t06-thin90.a2m with 1361 sequences, total weight= 1361 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13752 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kq3A/info/1kq3A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kq3A/nostruct-align/1kq3A.t06-thin90.a2m.gz, have 52180 columns in 225 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nvmA/nostruct-align/1nvmA.t06-thin90.a2m.gz # 1nvmA.t06-thin90.a2m with 1183 sequences, total weight= 760.082 avg weight= 0.642504 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30995 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nvmA/info/1nvmA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nvmA/nostruct-align/1nvmA.t06-thin90.a2m.gz, have 52520 columns in 226 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kugA/nostruct-align/1kugA.t06-thin90.a2m.gz # 1kugA.t06-thin90.a2m with 587 sequences, total weight= 587 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17722 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kugA/info/1kugA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kugA/nostruct-align/1kugA.t06-thin90.a2m.gz, have 52721 columns in 227 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wubA/nostruct-align/1wubA.t06-thin90.a2m.gz # 1wubA.t06-thin90.a2m with 366 sequences, total weight= 366 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26855 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wubA/info/1wubA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1wubA/nostruct-align/1wubA.t06-thin90.a2m.gz, have 52897 columns in 228 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1umgA/nostruct-align/1umgA.t06-thin90.a2m.gz # 1umgA.t06-thin90.a2m with 29 sequences, total weight= 4.07807 avg weight= 0.140623 20 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1umgA/info/1umgA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1umgA/nostruct-align/1umgA.t06-thin90.a2m.gz, have 53256 columns in 229 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gkpA/nostruct-align/1gkpA.t06-thin90.a2m.gz # 1gkpA.t06-thin90.a2m with 3064 sequences, total weight= 3064 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.889415 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gkpA/info/1gkpA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gkpA/nostruct-align/1gkpA.t06-thin90.a2m.gz, have 53714 columns in 230 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lwbA/nostruct-align/1lwbA.t06-thin90.a2m.gz # 1lwbA.t06-thin90.a2m with 26 sequences, total weight= 21.1829 avg weight= 0.814726 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lwbA/info/1lwbA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1lwbA/nostruct-align/1lwbA.t06-thin90.a2m.gz, have 53836 columns in 231 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w6sA/nostruct-align/1w6sA.t06-thin90.a2m.gz # 1w6sA.t06-thin90.a2m with 1223 sequences, total weight= 1223 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.919536 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w6sA/info/1w6sA.stride-mixed.n_notor WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1w/1w6sA/nostruct-align/1w6sA.t06-thin90.a2m.gz, have 54431 columns in 232 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gnlA/nostruct-align/1gnlA.t06-thin90.a2m.gz # 1gnlA.t06-thin90.a2m with 176 sequences, total weight= 47.2434 avg weight= 0.268428 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gnlA/info/1gnlA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gnlA/nostruct-align/1gnlA.t06-thin90.a2m.gz, have 54974 columns in 233 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nls/nostruct-align/1nls.t06-thin90.a2m.gz # 1nls.t06-thin90.a2m with 538 sequences, total weight= 186.058 avg weight= 0.345833 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30428 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nls/info/1nls.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nls/nostruct-align/1nls.t06-thin90.a2m.gz, have 55211 columns in 234 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wr8A/nostruct-align/1wr8A.t06-thin90.a2m.gz # 1wr8A.t06-thin90.a2m with 5472 sequences, total weight= 5472 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.928799 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wr8A/info/1wr8A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1wr8A/nostruct-align/1wr8A.t06-thin90.a2m.gz, have 55441 columns in 235 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mtzA/nostruct-align/1mtzA.t06-thin90.a2m.gz # 1mtzA.t06-thin90.a2m with 10153 sequences, total weight= 10153 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.676795 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mtzA/info/1mtzA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mtzA/nostruct-align/1mtzA.t06-thin90.a2m.gz, have 55731 columns in 236 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gu2A/nostruct-align/1gu2A.t06-thin90.a2m.gz # 1gu2A.t06-thin90.a2m with 18 sequences, total weight= 9.18377 avg weight= 0.510209 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gu2A/info/1gu2A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gu2A/nostruct-align/1gu2A.t06-thin90.a2m.gz, have 55855 columns in 237 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2m/2mhr/nostruct-align/2mhr.t06-thin90.a2m.gz # 2mhr.t06-thin90.a2m with 273 sequences, total weight= 273 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21207 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2m/2mhr/info/2mhr.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2m/2mhr/nostruct-align/2mhr.t06-thin90.a2m.gz, have 55973 columns in 238 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yn9A/nostruct-align/1yn9A.t06-thin90.a2m.gz # 1yn9A.t06-thin90.a2m with 2178 sequences, total weight= 2178 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.964068 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yn9A/info/1yn9A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1yn9A/nostruct-align/1yn9A.t06-thin90.a2m.gz, have 56141 columns in 239 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wl4A/nostruct-align/1wl4A.t06-thin90.a2m.gz # 1wl4A.t06-thin90.a2m with 2564 sequences, total weight= 2564 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23892 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wl4A/info/1wl4A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1wl4A/nostruct-align/1wl4A.t06-thin90.a2m.gz, have 56535 columns in 240 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uxaA/nostruct-align/1uxaA.t06-thin90.a2m.gz # 1uxaA.t06-thin90.a2m with 59 sequences, total weight= 16.9039 avg weight= 0.286507 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uxaA/info/1uxaA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1uxaA/nostruct-align/1uxaA.t06-thin90.a2m.gz, have 56720 columns in 241 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xrkA/nostruct-align/1xrkA.t06-thin90.a2m.gz # 1xrkA.t06-thin90.a2m with 3484 sequences, total weight= 3484 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.887937 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xrkA/info/1xrkA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xrkA/nostruct-align/1xrkA.t06-thin90.a2m.gz, have 56840 columns in 242 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dozA/nostruct-align/1dozA.t06-thin90.a2m.gz # 1dozA.t06-thin90.a2m with 394 sequences, total weight= 149.036 avg weight= 0.378264 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30695 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dozA/info/1dozA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1dozA/nostruct-align/1dozA.t06-thin90.a2m.gz, have 57149 columns in 243 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lfpA/nostruct-align/1lfpA.t06-thin90.a2m.gz # 1lfpA.t06-thin90.a2m with 356 sequences, total weight= 23.3325 avg weight= 0.0655407 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lfpA/info/1lfpA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1lfpA/nostruct-align/1lfpA.t06-thin90.a2m.gz, have 57392 columns in 244 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xttA/nostruct-align/1xttA.t06-thin90.a2m.gz # 1xttA.t06-thin90.a2m with 695 sequences, total weight= 590.42 avg weight= 0.849526 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3029 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xttA/info/1xttA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xttA/nostruct-align/1xttA.t06-thin90.a2m.gz, have 57607 columns in 245 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yd0A/nostruct-align/1yd0A.t06-thin90.a2m.gz # 1yd0A.t06-thin90.a2m with 408 sequences, total weight= 27.7187 avg weight= 0.067938 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yd0A/info/1yd0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1yd0A/nostruct-align/1yd0A.t06-thin90.a2m.gz, have 57696 columns in 246 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1syyA/nostruct-align/1syyA.t06-thin90.a2m.gz # 1syyA.t06-thin90.a2m with 441 sequences, total weight= 441 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22389 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1syyA/info/1syyA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1syyA/nostruct-align/1syyA.t06-thin90.a2m.gz, have 58013 columns in 247 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hnjA/nostruct-align/1hnjA.t06-thin90.a2m.gz # 1hnjA.t06-thin90.a2m with 2849 sequences, total weight= 2849 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07021 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hnjA/info/1hnjA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1hnjA/nostruct-align/1hnjA.t06-thin90.a2m.gz, have 58330 columns in 248 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r7jA/nostruct-align/1r7jA.t06-thin90.a2m.gz # 1r7jA.t06-thin90.a2m with 36 sequences, total weight= 26.3242 avg weight= 0.731229 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r7jA/info/1r7jA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1r7jA/nostruct-align/1r7jA.t06-thin90.a2m.gz, have 58420 columns in 249 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jfbA/nostruct-align/1jfbA.t06-thin90.a2m.gz # 1jfbA.t06-thin90.a2m with 5679 sequences, total weight= 5679 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00633 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jfbA/info/1jfbA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jfbA/nostruct-align/1jfbA.t06-thin90.a2m.gz, have 58819 columns in 250 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o7iA/nostruct-align/1o7iA.t06-thin90.a2m.gz # 1o7iA.t06-thin90.a2m with 175 sequences, total weight= 175 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22661 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o7iA/info/1o7iA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1o7iA/nostruct-align/1o7iA.t06-thin90.a2m.gz, have 58934 columns in 251 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j1yA/nostruct-align/1j1yA.t06-thin90.a2m.gz # 1j1yA.t06-thin90.a2m with 1628 sequences, total weight= 1628 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00517 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j1yA/info/1j1yA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1j1yA/nostruct-align/1j1yA.t06-thin90.a2m.gz, have 59050 columns in 252 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oz2A/nostruct-align/1oz2A.t06-thin90.a2m.gz # 1oz2A.t06-thin90.a2m with 119 sequences, total weight= 32.6937 avg weight= 0.274737 41 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oz2A/info/1oz2A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1oz2A/nostruct-align/1oz2A.t06-thin90.a2m.gz, have 59374 columns in 253 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f8eA/nostruct-align/1f8eA.t06-thin90.a2m.gz # 1f8eA.t06-thin90.a2m with 72 sequences, total weight= 5.74265 avg weight= 0.079759 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f8eA/info/1f8eA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1f8eA/nostruct-align/1f8eA.t06-thin90.a2m.gz, have 59762 columns in 254 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xpcA/nostruct-align/1xpcA.t06-thin90.a2m.gz # 1xpcA.t06-thin90.a2m with 1057 sequences, total weight= 1057 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.957772 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xpcA/info/1xpcA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xpcA/nostruct-align/1xpcA.t06-thin90.a2m.gz, have 60007 columns in 255 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vr8A/nostruct-align/1vr8A.t06-thin90.a2m.gz # 1vr8A.t06-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.595407 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vr8A/info/1vr8A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vr8A/nostruct-align/1vr8A.t06-thin90.a2m.gz, have 60142 columns in 256 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kzqA/nostruct-align/1kzqA.t06-thin90.a2m.gz # 1kzqA.t06-thin90.a2m with 32 sequences, total weight= 26.2513 avg weight= 0.820354 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kzqA/info/1kzqA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kzqA/nostruct-align/1kzqA.t06-thin90.a2m.gz, have 60395 columns in 257 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t9hA/nostruct-align/1t9hA.t06-thin90.a2m.gz # 1t9hA.t06-thin90.a2m with 2930 sequences, total weight= 2930 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07649 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t9hA/info/1t9hA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1t9hA/nostruct-align/1t9hA.t06-thin90.a2m.gz, have 60682 columns in 258 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yxyA/nostruct-align/1yxyA.t06-thin90.a2m.gz # 1yxyA.t06-thin90.a2m with 4756 sequences, total weight= 4756 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.960551 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yxyA/info/1yxyA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1yxyA/nostruct-align/1yxyA.t06-thin90.a2m.gz, have 60912 columns in 259 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m1nB/nostruct-align/1m1nB.t06-thin90.a2m.gz # 1m1nB.t06-thin90.a2m with 674 sequences, total weight= 674 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23932 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m1nB/info/1m1nB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1m1nB/nostruct-align/1m1nB.t06-thin90.a2m.gz, have 61434 columns in 260 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qw2A/nostruct-align/1qw2A.t06-thin90.a2m.gz # 1qw2A.t06-thin90.a2m with 23 sequences, total weight= 9.7195 avg weight= 0.422587 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qw2A/info/1qw2A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qw2A/nostruct-align/1qw2A.t06-thin90.a2m.gz, have 61536 columns in 261 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ufoA/nostruct-align/1ufoA.t06-thin90.a2m.gz # 1ufoA.t06-thin90.a2m with 14463 sequences, total weight= 14463 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.743631 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ufoA/info/1ufoA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1ufoA/nostruct-align/1ufoA.t06-thin90.a2m.gz, have 61774 columns in 262 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vkfA/nostruct-align/1vkfA.t06-thin90.a2m.gz # 1vkfA.t06-thin90.a2m with 38 sequences, total weight= 10.3638 avg weight= 0.27273 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vkfA/info/1vkfA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vkfA/nostruct-align/1vkfA.t06-thin90.a2m.gz, have 61946 columns in 263 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nszA/nostruct-align/1nszA.t06-thin90.a2m.gz # 1nszA.t06-thin90.a2m with 582 sequences, total weight= 582 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14034 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nszA/info/1nszA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nszA/nostruct-align/1nszA.t06-thin90.a2m.gz, have 62286 columns in 264 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dd9A/nostruct-align/1dd9A.t06-thin90.a2m.gz # 1dd9A.t06-thin90.a2m with 650 sequences, total weight= 650 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0808 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dd9A/info/1dd9A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1dd9A/nostruct-align/1dd9A.t06-thin90.a2m.gz, have 62596 columns in 265 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iuaA/nostruct-align/1iuaA.t06-thin90.a2m.gz # 1iuaA.t06-thin90.a2m with 57 sequences, total weight= 26.3972 avg weight= 0.463108 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iuaA/info/1iuaA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1iuaA/nostruct-align/1iuaA.t06-thin90.a2m.gz, have 62679 columns in 266 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lqtA/nostruct-align/1lqtA.t06-thin90.a2m.gz # 1lqtA.t06-thin90.a2m with 11192 sequences, total weight= 11192 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.878245 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lqtA/info/1lqtA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1lqtA/nostruct-align/1lqtA.t06-thin90.a2m.gz, have 63131 columns in 267 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mml/nostruct-align/1mml.t06-thin90.a2m.gz # 1mml.t06-thin90.a2m with 198 sequences, total weight= 4.74042 avg weight= 0.0239415 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mml/info/1mml.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mml/nostruct-align/1mml.t06-thin90.a2m.gz, have 63382 columns in 268 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y93A/nostruct-align/1y93A.t06-thin90.a2m.gz # 1y93A.t06-thin90.a2m with 538 sequences, total weight= 538 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1474 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y93A/info/1y93A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1y93A/nostruct-align/1y93A.t06-thin90.a2m.gz, have 63540 columns in 269 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i2kA/nostruct-align/1i2kA.t06-thin90.a2m.gz # 1i2kA.t06-thin90.a2m with 938 sequences, total weight= 938 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21051 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i2kA/info/1i2kA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1i2kA/nostruct-align/1i2kA.t06-thin90.a2m.gz, have 63809 columns in 270 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x6zA/nostruct-align/1x6zA.t06-thin90.a2m.gz # 1x6zA.t06-thin90.a2m with 218 sequences, total weight= 92.5389 avg weight= 0.42449 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30099 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x6zA/info/1x6zA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1x6zA/nostruct-align/1x6zA.t06-thin90.a2m.gz, have 63928 columns in 271 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wwzA/nostruct-align/1wwzA.t06-thin90.a2m.gz # 1wwzA.t06-thin90.a2m with 8197 sequences, total weight= 8197 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.760452 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wwzA/info/1wwzA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1wwzA/nostruct-align/1wwzA.t06-thin90.a2m.gz, have 64085 columns in 272 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1amf/nostruct-align/1amf.t06-thin90.a2m.gz # 1amf.t06-thin90.a2m with 2786 sequences, total weight= 2786 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.866945 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1amf/info/1amf.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1a/1amf/nostruct-align/1amf.t06-thin90.a2m.gz, have 64316 columns in 273 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nogA/nostruct-align/1nogA.t06-thin90.a2m.gz # 1nogA.t06-thin90.a2m with 220 sequences, total weight= 22.9229 avg weight= 0.104195 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nogA/info/1nogA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nogA/nostruct-align/1nogA.t06-thin90.a2m.gz, have 64465 columns in 274 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kid/nostruct-align/1kid.t06-thin90.a2m.gz # 1kid.t06-thin90.a2m with 657 sequences, total weight= 20.588 avg weight= 0.0313363 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kid/info/1kid.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kid/nostruct-align/1kid.t06-thin90.a2m.gz, have 64658 columns in 275 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ryqA/nostruct-align/1ryqA.t06-thin90.a2m.gz # 1ryqA.t06-thin90.a2m with 64 sequences, total weight= 13.4643 avg weight= 0.21038 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ryqA/info/1ryqA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1ryqA/nostruct-align/1ryqA.t06-thin90.a2m.gz, have 64722 columns in 276 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n4wA/nostruct-align/1n4wA.t06-thin90.a2m.gz # 1n4wA.t06-thin90.a2m with 7677 sequences, total weight= 7677 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.656873 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n4wA/info/1n4wA.stride-mixed.n_notor WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1n/1n4wA/nostruct-align/1n4wA.t06-thin90.a2m.gz, have 65220 columns in 277 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e7lA/nostruct-align/1e7lA.t06-thin90.a2m.gz # 1e7lA.t06-thin90.a2m with 34 sequences, total weight= 30.1538 avg weight= 0.886877 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e7lA/info/1e7lA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1e7lA/nostruct-align/1e7lA.t06-thin90.a2m.gz, have 65377 columns in 278 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jyeA/nostruct-align/1jyeA.t06-thin90.a2m.gz # 1jyeA.t06-thin90.a2m with 2729 sequences, total weight= 2729 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.989021 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jyeA/info/1jyeA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jyeA/nostruct-align/1jyeA.t06-thin90.a2m.gz, have 65648 columns in 279 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g66A/nostruct-align/1g66A.t06-thin90.a2m.gz # 1g66A.t06-thin90.a2m with 385 sequences, total weight= 385 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03542 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g66A/info/1g66A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1g66A/nostruct-align/1g66A.t06-thin90.a2m.gz, have 65855 columns in 280 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/19/19hcA/nostruct-align/19hcA.t06-thin90.a2m.gz # 19hcA.t06-thin90.a2m with 1124 sequences, total weight= 1124 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03116 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/19/19hcA/info/19hcA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/19/19hcA/nostruct-align/19hcA.t06-thin90.a2m.gz, have 66147 columns in 281 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bebA/nostruct-align/1bebA.t06-thin90.a2m.gz # 1bebA.t06-thin90.a2m with 549 sequences, total weight= 549 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02728 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bebA/info/1bebA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1b/1bebA/nostruct-align/1bebA.t06-thin90.a2m.gz, have 66303 columns in 282 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ii5A/nostruct-align/1ii5A.t06-thin90.a2m.gz # 1ii5A.t06-thin90.a2m with 3290 sequences, total weight= 3290 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.92216 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ii5A/info/1ii5A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1ii5A/nostruct-align/1ii5A.t06-thin90.a2m.gz, have 66524 columns in 283 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wmzA/nostruct-align/1wmzA.t06-thin90.a2m.gz # 1wmzA.t06-thin90.a2m with 2213 sequences, total weight= 2213 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00024 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wmzA/info/1wmzA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1wmzA/nostruct-align/1wmzA.t06-thin90.a2m.gz, have 66664 columns in 284 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oafA/nostruct-align/1oafA.t06-thin90.a2m.gz # 1oafA.t06-thin90.a2m with 1047 sequences, total weight= 71.3441 avg weight= 0.0681415 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3027 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oafA/info/1oafA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1oafA/nostruct-align/1oafA.t06-thin90.a2m.gz, have 66914 columns in 285 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i0rA/nostruct-align/1i0rA.t06-thin90.a2m.gz # 1i0rA.t06-thin90.a2m with 732 sequences, total weight= 732 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20434 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i0rA/info/1i0rA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1i0rA/nostruct-align/1i0rA.t06-thin90.a2m.gz, have 67075 columns in 286 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yocA/nostruct-align/1yocA.t06-thin90.a2m.gz # 1yocA.t06-thin90.a2m with 1089 sequences, total weight= 1089 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00929 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yocA/info/1yocA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1yocA/nostruct-align/1yocA.t06-thin90.a2m.gz, have 67220 columns in 287 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nbuA/nostruct-align/1nbuA.t06-thin90.a2m.gz # 1nbuA.t06-thin90.a2m with 361 sequences, total weight= 153.613 avg weight= 0.42552 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30792 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nbuA/info/1nbuA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nbuA/nostruct-align/1nbuA.t06-thin90.a2m.gz, have 67338 columns in 288 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d02A/nostruct-align/1d02A.t06-thin90.a2m.gz # 1d02A.t06-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.615068 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d02A/info/1d02A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1d02A/nostruct-align/1d02A.t06-thin90.a2m.gz, have 67535 columns in 289 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vl1A/nostruct-align/1vl1A.t06-thin90.a2m.gz # 1vl1A.t06-thin90.a2m with 529 sequences, total weight= 115.329 avg weight= 0.218013 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30455 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vl1A/info/1vl1A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vl1A/nostruct-align/1vl1A.t06-thin90.a2m.gz, have 67753 columns in 290 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cqmA/nostruct-align/1cqmA.t06-thin90.a2m.gz # 1cqmA.t06-thin90.a2m with 313 sequences, total weight= 74.2953 avg weight= 0.237365 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30253 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cqmA/info/1cqmA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1c/1cqmA/nostruct-align/1cqmA.t06-thin90.a2m.gz, have 67851 columns in 291 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1io7A/nostruct-align/1io7A.t06-thin90.a2m.gz # 1io7A.t06-thin90.a2m with 5557 sequences, total weight= 5557 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.994687 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1io7A/info/1io7A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1io7A/nostruct-align/1io7A.t06-thin90.a2m.gz, have 68217 columns in 292 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uwwA/nostruct-align/1uwwA.t06-thin90.a2m.gz # 1uwwA.t06-thin90.a2m with 23 sequences, total weight= 12.1548 avg weight= 0.528469 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uwwA/info/1uwwA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1uwwA/nostruct-align/1uwwA.t06-thin90.a2m.gz, have 68401 columns in 293 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iktA/nostruct-align/1iktA.t06-thin90.a2m.gz # 1iktA.t06-thin90.a2m with 199 sequences, total weight= 199 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27327 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iktA/info/1iktA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1iktA/nostruct-align/1iktA.t06-thin90.a2m.gz, have 68516 columns in 294 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yqhA/nostruct-align/1yqhA.t06-thin90.a2m.gz # 1yqhA.t06-thin90.a2m with 135 sequences, total weight= 43.4916 avg weight= 0.32216 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yqhA/info/1yqhA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1yqhA/nostruct-align/1yqhA.t06-thin90.a2m.gz, have 68620 columns in 295 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j8rA/nostruct-align/1j8rA.t06-thin90.a2m.gz # 1j8rA.t06-thin90.a2m with 5 sequences, total weight= 3.50337 avg weight= 0.700675 13 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j8rA/info/1j8rA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1j8rA/nostruct-align/1j8rA.t06-thin90.a2m.gz, have 68816 columns in 296 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gweA/nostruct-align/1gweA.t06-thin90.a2m.gz # 1gweA.t06-thin90.a2m with 535 sequences, total weight= 61.9882 avg weight= 0.115866 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30041 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gweA/info/1gweA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gweA/nostruct-align/1gweA.t06-thin90.a2m.gz, have 69314 columns in 297 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ispA/nostruct-align/1ispA.t06-thin90.a2m.gz # 1ispA.t06-thin90.a2m with 10748 sequences, total weight= 10748 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.8402 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ispA/info/1ispA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1ispA/nostruct-align/1ispA.t06-thin90.a2m.gz, have 69493 columns in 298 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nrvA/nostruct-align/1nrvA.t06-thin90.a2m.gz # 1nrvA.t06-thin90.a2m with 861 sequences, total weight= 823.574 avg weight= 0.956532 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30108 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nrvA/info/1nrvA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nrvA/nostruct-align/1nrvA.t06-thin90.a2m.gz, have 69593 columns in 299 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cs1A/nostruct-align/1cs1A.t06-thin90.a2m.gz # 1cs1A.t06-thin90.a2m with 9664 sequences, total weight= 9664 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.89028 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cs1A/info/1cs1A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1c/1cs1A/nostruct-align/1cs1A.t06-thin90.a2m.gz, have 69977 columns in 300 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bdmA/nostruct-align/1bdmA.t06-thin90.a2m.gz # 1bdmA.t06-thin90.a2m with 2861 sequences, total weight= 2861 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03713 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bdmA/info/1bdmA.stride-mixed.n_notor WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1b/1bdmA/nostruct-align/1bdmA.t06-thin90.a2m.gz, have 70294 columns in 301 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lc5A/nostruct-align/1lc5A.t06-thin90.a2m.gz # 1lc5A.t06-thin90.a2m with 8911 sequences, total weight= 8911 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.914124 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lc5A/info/1lc5A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1lc5A/nostruct-align/1lc5A.t06-thin90.a2m.gz, have 70649 columns in 302 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w2fA/nostruct-align/1w2fA.t06-thin90.a2m.gz # 1w2fA.t06-thin90.a2m with 175 sequences, total weight= 175 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27761 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w2fA/info/1w2fA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1w2fA/nostruct-align/1w2fA.t06-thin90.a2m.gz, have 70925 columns in 303 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1je0A/nostruct-align/1je0A.t06-thin90.a2m.gz # 1je0A.t06-thin90.a2m with 1178 sequences, total weight= 1178 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03563 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1je0A/info/1je0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1je0A/nostruct-align/1je0A.t06-thin90.a2m.gz, have 71151 columns in 304 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iab/nostruct-align/1iab.t06-thin90.a2m.gz # 1iab.t06-thin90.a2m with 511 sequences, total weight= 511 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23979 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iab/info/1iab.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1iab/nostruct-align/1iab.t06-thin90.a2m.gz, have 71351 columns in 305 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gnyA/nostruct-align/1gnyA.t06-thin90.a2m.gz # 1gnyA.t06-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13668 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gnyA/info/1gnyA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gnyA/nostruct-align/1gnyA.t06-thin90.a2m.gz, have 71504 columns in 306 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y9iA/nostruct-align/1y9iA.t06-thin90.a2m.gz # 1y9iA.t06-thin90.a2m with 204 sequences, total weight= 66.5871 avg weight= 0.326407 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30088 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y9iA/info/1y9iA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1y9iA/nostruct-align/1y9iA.t06-thin90.a2m.gz, have 71663 columns in 307 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1na3A/nostruct-align/1na3A.t06-thin90.a2m.gz # 1na3A.t06-thin90.a2m with 9217 sequences, total weight= 9217 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.973744 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1na3A/info/1na3A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1na3A/nostruct-align/1na3A.t06-thin90.a2m.gz, have 71749 columns in 308 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m6sA/nostruct-align/1m6sA.t06-thin90.a2m.gz # 1m6sA.t06-thin90.a2m with 12576 sequences, total weight= 12576 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.862681 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m6sA/info/1m6sA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1m6sA/nostruct-align/1m6sA.t06-thin90.a2m.gz, have 72092 columns in 309 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lb6A/nostruct-align/1lb6A.t06-thin90.a2m.gz # 1lb6A.t06-thin90.a2m with 241 sequences, total weight= 241 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22467 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lb6A/info/1lb6A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1lb6A/nostruct-align/1lb6A.t06-thin90.a2m.gz, have 72247 columns in 310 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1ga6A/nostruct-align/1ga6A.t06-thin90.a2m.gz # 1ga6A.t06-thin90.a2m with 1700 sequences, total weight= 1700 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0979 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1ga6A/info/1ga6A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1ga6A/nostruct-align/1ga6A.t06-thin90.a2m.gz, have 72616 columns in 311 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1agjA/nostruct-align/1agjA.t06-thin90.a2m.gz # 1agjA.t06-thin90.a2m with 4699 sequences, total weight= 4699 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.980716 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1agjA/info/1agjA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1a/1agjA/nostruct-align/1agjA.t06-thin90.a2m.gz, have 72858 columns in 312 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g4yB/nostruct-align/1g4yB.t06-thin90.a2m.gz # 1g4yB.t06-thin90.a2m with 26 sequences, total weight= 5.9791 avg weight= 0.229965 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g4yB/info/1g4yB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1g4yB/nostruct-align/1g4yB.t06-thin90.a2m.gz, have 72939 columns in 313 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tzpA/nostruct-align/1tzpA.t06-thin90.a2m.gz # 1tzpA.t06-thin90.a2m with 61 sequences, total weight= 14.8622 avg weight= 0.243642 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tzpA/info/1tzpA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1tzpA/nostruct-align/1tzpA.t06-thin90.a2m.gz, have 73179 columns in 314 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vie/nostruct-align/1vie.t06-thin90.a2m.gz # 1vie.t06-thin90.a2m with 3 sequences, total weight= 1.86591 avg weight= 0.621969 10 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vie/info/1vie.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vie/nostruct-align/1vie.t06-thin90.a2m.gz, have 73239 columns in 315 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dk0A/nostruct-align/1dk0A.t06-thin90.a2m.gz # 1dk0A.t06-thin90.a2m with 18 sequences, total weight= 8.40107 avg weight= 0.466726 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dk0A/info/1dk0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1dk0A/nostruct-align/1dk0A.t06-thin90.a2m.gz, have 73412 columns in 316 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l8rA/nostruct-align/1l8rA.t06-thin90.a2m.gz # 1l8rA.t06-thin90.a2m with 18 sequences, total weight= 3.20117 avg weight= 0.177843 15 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l8rA/info/1l8rA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1l8rA/nostruct-align/1l8rA.t06-thin90.a2m.gz, have 73513 columns in 317 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h7cA/nostruct-align/1h7cA.t06-thin90.a2m.gz # 1h7cA.t06-thin90.a2m with 50 sequences, total weight= 24.8968 avg weight= 0.497936 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h7cA/info/1h7cA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1h7cA/nostruct-align/1h7cA.t06-thin90.a2m.gz, have 73616 columns in 318 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kveB/nostruct-align/1kveB.t06-thin90.a2m.gz # 1kveB.t06-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.649556 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kveB/info/1kveB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kveB/nostruct-align/1kveB.t06-thin90.a2m.gz, have 73693 columns in 319 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1elwA/nostruct-align/1elwA.t06-thin90.a2m.gz # 1elwA.t06-thin90.a2m with 9817 sequences, total weight= 9817 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.911987 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1elwA/info/1elwA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1elwA/nostruct-align/1elwA.t06-thin90.a2m.gz, have 73810 columns in 320 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1aho/nostruct-align/1aho.t06-thin90.a2m.gz # 1aho.t06-thin90.a2m with 126 sequences, total weight= 12.5315 avg weight= 0.0994561 41 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1aho/info/1aho.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1a/1aho/nostruct-align/1aho.t06-thin90.a2m.gz, have 73874 columns in 321 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tvxA/nostruct-align/1tvxA.t06-thin90.a2m.gz # 1tvxA.t06-thin90.a2m with 256 sequences, total weight= 41.941 avg weight= 0.163832 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30045 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tvxA/info/1tvxA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1tvxA/nostruct-align/1tvxA.t06-thin90.a2m.gz, have 73938 columns in 322 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rk6A/nostruct-align/1rk6A.t06-thin90.a2m.gz # 1rk6A.t06-thin90.a2m with 3053 sequences, total weight= 3053 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.867314 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rk6A/info/1rk6A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rk6A/nostruct-align/1rk6A.t06-thin90.a2m.gz, have 74412 columns in 323 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w0pA/nostruct-align/1w0pA.t06-thin90.a2m.gz # 1w0pA.t06-thin90.a2m with 1258 sequences, total weight= 1139.52 avg weight= 0.905819 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30113 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w0pA/info/1w0pA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1w0pA/nostruct-align/1w0pA.t06-thin90.a2m.gz, have 75165 columns in 324 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o9iA/nostruct-align/1o9iA.t06-thin90.a2m.gz # 1o9iA.t06-thin90.a2m with 92 sequences, total weight= 27.2323 avg weight= 0.296003 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o9iA/info/1o9iA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1o9iA/nostruct-align/1o9iA.t06-thin90.a2m.gz, have 75431 columns in 325 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jboA/nostruct-align/1jboA.t06-thin90.a2m.gz # 1jboA.t06-thin90.a2m with 321 sequences, total weight= 43.5905 avg weight= 0.135796 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jboA/info/1jboA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jboA/nostruct-align/1jboA.t06-thin90.a2m.gz, have 75593 columns in 326 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jz8A/nostruct-align/1jz8A.t06-thin90.a2m.gz # 1jz8A.t06-thin90.a2m with 789 sequences, total weight= 789 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13236 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jz8A/info/1jz8A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jz8A/nostruct-align/1jz8A.t06-thin90.a2m.gz, have 76604 columns in 327 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lkkA/nostruct-align/1lkkA.t06-thin90.a2m.gz # 1lkkA.t06-thin90.a2m with 860 sequences, total weight= 860 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29786 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lkkA/info/1lkkA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1lkkA/nostruct-align/1lkkA.t06-thin90.a2m.gz, have 76709 columns in 328 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j83A/nostruct-align/1j83A.t06-thin90.a2m.gz # 1j83A.t06-thin90.a2m with 21 sequences, total weight= 8.2562 avg weight= 0.393152 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j83A/info/1j83A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1j83A/nostruct-align/1j83A.t06-thin90.a2m.gz, have 76889 columns in 329 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n7oA/nostruct-align/1n7oA.t06-thin90.a2m.gz # 1n7oA.t06-thin90.a2m with 76 sequences, total weight= 76 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13722 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n7oA/info/1n7oA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1n7oA/nostruct-align/1n7oA.t06-thin90.a2m.gz, have 77610 columns in 330 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kqfA/nostruct-align/1kqfA.t06-thin90.a2m.gz # 1kqfA.t06-thin90.a2m with 1552 sequences, total weight= 1552 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12973 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kqfA/info/1kqfA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kqfA/nostruct-align/1kqfA.t06-thin90.a2m.gz, have 78592 columns in 331 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mtyB/nostruct-align/1mtyB.t06-thin90.a2m.gz # 1mtyB.t06-thin90.a2m with 142 sequences, total weight= 116.496 avg weight= 0.820396 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mtyB/info/1mtyB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mtyB/nostruct-align/1mtyB.t06-thin90.a2m.gz, have 78976 columns in 332 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jtgB/nostruct-align/1jtgB.t06-thin90.a2m.gz # 1jtgB.t06-thin90.a2m with 4 sequences, total weight= 4 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1647 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jtgB/info/1jtgB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jtgB/nostruct-align/1jtgB.t06-thin90.a2m.gz, have 79141 columns in 333 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q4uA/nostruct-align/1q4uA.t06-thin90.a2m.gz # 1q4uA.t06-thin90.a2m with 1477 sequences, total weight= 1477 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.951299 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q4uA/info/1q4uA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1q4uA/nostruct-align/1q4uA.t06-thin90.a2m.gz, have 79281 columns in 334 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ujpA/nostruct-align/1ujpA.t06-thin90.a2m.gz # 1ujpA.t06-thin90.a2m with 458 sequences, total weight= 169.301 avg weight= 0.369653 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30718 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ujpA/info/1ujpA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1ujpA/nostruct-align/1ujpA.t06-thin90.a2m.gz, have 79524 columns in 335 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h70A/nostruct-align/1h70A.t06-thin90.a2m.gz # 1h70A.t06-thin90.a2m with 464 sequences, total weight= 464 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12878 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h70A/info/1h70A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1h70A/nostruct-align/1h70A.t06-thin90.a2m.gz, have 79779 columns in 336 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nkd/nostruct-align/1nkd.t06-thin90.a2m.gz # 1nkd.t06-thin90.a2m with 19 sequences, total weight= 4.25624 avg weight= 0.224012 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nkd/info/1nkd.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nkd/nostruct-align/1nkd.t06-thin90.a2m.gz, have 79838 columns in 337 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xdzA/nostruct-align/1xdzA.t06-thin90.a2m.gz # 1xdzA.t06-thin90.a2m with 8650 sequences, total weight= 8650 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.738903 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xdzA/info/1xdzA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xdzA/nostruct-align/1xdzA.t06-thin90.a2m.gz, have 80076 columns in 338 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iv3A/nostruct-align/1iv3A.t06-thin90.a2m.gz # 1iv3A.t06-thin90.a2m with 277 sequences, total weight= 10.1421 avg weight= 0.0366139 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iv3A/info/1iv3A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1iv3A/nostruct-align/1iv3A.t06-thin90.a2m.gz, have 80226 columns in 339 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jatB/nostruct-align/1jatB.t06-thin90.a2m.gz # 1jatB.t06-thin90.a2m with 1035 sequences, total weight= 298.243 avg weight= 0.288158 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31748 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jatB/info/1jatB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jatB/nostruct-align/1jatB.t06-thin90.a2m.gz, have 80358 columns in 340 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xfiA/nostruct-align/1xfiA.t06-thin90.a2m.gz # 1xfiA.t06-thin90.a2m with 129 sequences, total weight= 129 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20068 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xfiA/info/1xfiA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xfiA/nostruct-align/1xfiA.t06-thin90.a2m.gz, have 80701 columns in 341 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1plc/nostruct-align/1plc.t06-thin90.a2m.gz # 1plc.t06-thin90.a2m with 472 sequences, total weight= 472 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16587 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1plc/info/1plc.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1plc/nostruct-align/1plc.t06-thin90.a2m.gz, have 80800 columns in 342 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jf8A/nostruct-align/1jf8A.t06-thin90.a2m.gz # 1jf8A.t06-thin90.a2m with 758 sequences, total weight= 427.536 avg weight= 0.564032 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31106 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jf8A/info/1jf8A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jf8A/nostruct-align/1jf8A.t06-thin90.a2m.gz, have 80930 columns in 343 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1odmA/nostruct-align/1odmA.t06-thin90.a2m.gz # 1odmA.t06-thin90.a2m with 991 sequences, total weight= 991 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21102 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1odmA/info/1odmA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1odmA/nostruct-align/1odmA.t06-thin90.a2m.gz, have 81259 columns in 344 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ew4A/nostruct-align/1ew4A.t06-thin90.a2m.gz # 1ew4A.t06-thin90.a2m with 117 sequences, total weight= 27.7475 avg weight= 0.237159 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ew4A/info/1ew4A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1ew4A/nostruct-align/1ew4A.t06-thin90.a2m.gz, have 81365 columns in 345 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gutA/nostruct-align/1gutA.t06-thin90.a2m.gz # 1gutA.t06-thin90.a2m with 261 sequences, total weight= 22.8828 avg weight= 0.0876735 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gutA/info/1gutA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gutA/nostruct-align/1gutA.t06-thin90.a2m.gz, have 81432 columns in 346 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wz8A/nostruct-align/1wz8A.t06-thin90.a2m.gz # 1wz8A.t06-thin90.a2m with 3065 sequences, total weight= 3065 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18605 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wz8A/info/1wz8A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1wz8A/nostruct-align/1wz8A.t06-thin90.a2m.gz, have 81695 columns in 347 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mxrA/nostruct-align/1mxrA.t06-thin90.a2m.gz # 1mxrA.t06-thin90.a2m with 423 sequences, total weight= 423 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24635 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mxrA/info/1mxrA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mxrA/nostruct-align/1mxrA.t06-thin90.a2m.gz, have 82034 columns in 348 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n6aA/nostruct-align/1n6aA.t06-thin90.a2m.gz # 1n6aA.t06-thin90.a2m with 679 sequences, total weight= 679 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.996299 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n6aA/info/1n6aA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1n6aA/nostruct-align/1n6aA.t06-thin90.a2m.gz, have 82268 columns in 349 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ecsA/nostruct-align/1ecsA.t06-thin90.a2m.gz # 1ecsA.t06-thin90.a2m with 3217 sequences, total weight= 3217 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.897858 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ecsA/info/1ecsA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1ecsA/nostruct-align/1ecsA.t06-thin90.a2m.gz, have 82388 columns in 350 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1of8A/nostruct-align/1of8A.t06-thin90.a2m.gz # 1of8A.t06-thin90.a2m with 625 sequences, total weight= 41.7634 avg weight= 0.0668214 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1of8A/info/1of8A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1of8A/nostruct-align/1of8A.t06-thin90.a2m.gz, have 82727 columns in 351 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f7dA/nostruct-align/1f7dA.t06-thin90.a2m.gz # 1f7dA.t06-thin90.a2m with 737 sequences, total weight= 737 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25888 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f7dA/info/1f7dA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1f7dA/nostruct-align/1f7dA.t06-thin90.a2m.gz, have 82845 columns in 352 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lk9A/nostruct-align/1lk9A.t06-thin90.a2m.gz # 1lk9A.t06-thin90.a2m with 7032 sequences, total weight= 7032 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.878213 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lk9A/info/1lk9A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1lk9A/nostruct-align/1lk9A.t06-thin90.a2m.gz, have 83270 columns in 353 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pmhX/nostruct-align/1pmhX.t06-thin90.a2m.gz # 1pmhX.t06-thin90.a2m with 17 sequences, total weight= 11.652 avg weight= 0.685409 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pmhX/info/1pmhX.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1pmhX/nostruct-align/1pmhX.t06-thin90.a2m.gz, have 83453 columns in 354 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yv4A/nostruct-align/1yv4A.t06-thin90.a2m.gz # 1yv4A.t06-thin90.a2m with 187 sequences, total weight= 21.089 avg weight= 0.112775 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yv4A/info/1yv4A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1yv4A/nostruct-align/1yv4A.t06-thin90.a2m.gz, have 83557 columns in 355 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qz5A/nostruct-align/1qz5A.t06-thin90.a2m.gz # 1qz5A.t06-thin90.a2m with 922 sequences, total weight= 301.369 avg weight= 0.326864 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31444 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qz5A/info/1qz5A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qz5A/nostruct-align/1qz5A.t06-thin90.a2m.gz, have 83916 columns in 356 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h99A/nostruct-align/1h99A.t06-thin90.a2m.gz # 1h99A.t06-thin90.a2m with 348 sequences, total weight= 348 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.999854 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h99A/info/1h99A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1h99A/nostruct-align/1h99A.t06-thin90.a2m.gz, have 84136 columns in 357 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c9oA/nostruct-align/1c9oA.t06-thin90.a2m.gz # 1c9oA.t06-thin90.a2m with 920 sequences, total weight= 29.9041 avg weight= 0.0325045 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c9oA/info/1c9oA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1c/1c9oA/nostruct-align/1c9oA.t06-thin90.a2m.gz, have 84202 columns in 358 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yx1A/nostruct-align/1yx1A.t06-thin90.a2m.gz # 1yx1A.t06-thin90.a2m with 1383 sequences, total weight= 1383 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.892928 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yx1A/info/1yx1A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1yx1A/nostruct-align/1yx1A.t06-thin90.a2m.gz, have 84452 columns in 359 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yy6A/nostruct-align/1yy6A.t06-thin90.a2m.gz # 1yy6A.t06-thin90.a2m with 671 sequences, total weight= 671 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04327 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yy6A/info/1yy6A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1yy6A/nostruct-align/1yy6A.t06-thin90.a2m.gz, have 84589 columns in 360 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iq6A/nostruct-align/1iq6A.t06-thin90.a2m.gz # 1iq6A.t06-thin90.a2m with 1220 sequences, total weight= 1220 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09609 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iq6A/info/1iq6A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1iq6A/nostruct-align/1iq6A.t06-thin90.a2m.gz, have 84721 columns in 361 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pwxA/nostruct-align/1pwxA.t06-thin90.a2m.gz # 1pwxA.t06-thin90.a2m with 1450 sequences, total weight= 1450 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11703 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pwxA/info/1pwxA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1pwxA/nostruct-align/1pwxA.t06-thin90.a2m.gz, have 84973 columns in 362 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x7yA/nostruct-align/1x7yA.t06-thin90.a2m.gz # 1x7yA.t06-thin90.a2m with 2175 sequences, total weight= 2175 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08672 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x7yA/info/1x7yA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1x7yA/nostruct-align/1x7yA.t06-thin90.a2m.gz, have 85342 columns in 363 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rzhH/nostruct-align/1rzhH.t06-thin90.a2m.gz # 1rzhH.t06-thin90.a2m with 52 sequences, total weight= 31.3398 avg weight= 0.602688 37 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rzhH/info/1rzhH.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rzhH/nostruct-align/1rzhH.t06-thin90.a2m.gz, have 85580 columns in 364 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1es9A/nostruct-align/1es9A.t06-thin90.a2m.gz # 1es9A.t06-thin90.a2m with 1612 sequences, total weight= 1612 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.807466 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1es9A/info/1es9A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1es9A/nostruct-align/1es9A.t06-thin90.a2m.gz, have 85792 columns in 365 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1ja1A/nostruct-align/1ja1A.t06-thin90.a2m.gz # 1ja1A.t06-thin90.a2m with 2283 sequences, total weight= 2283 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02508 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1ja1A/info/1ja1A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1ja1A/nostruct-align/1ja1A.t06-thin90.a2m.gz, have 86408 columns in 366 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n9pA/nostruct-align/1n9pA.t06-thin90.a2m.gz # 1n9pA.t06-thin90.a2m with 142 sequences, total weight= 31.7394 avg weight= 0.223517 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n9pA/info/1n9pA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1n9pA/nostruct-align/1n9pA.t06-thin90.a2m.gz, have 86605 columns in 367 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tp6A/nostruct-align/1tp6A.t06-thin90.a2m.gz # 1tp6A.t06-thin90.a2m with 23 sequences, total weight= 10.6796 avg weight= 0.46433 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tp6A/info/1tp6A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1tp6A/nostruct-align/1tp6A.t06-thin90.a2m.gz, have 86731 columns in 368 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wnaA/nostruct-align/1wnaA.t06-thin90.a2m.gz # 1wnaA.t06-thin90.a2m with 4 sequences, total weight= 3.17374 avg weight= 0.793434 11 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wnaA/info/1wnaA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1wnaA/nostruct-align/1wnaA.t06-thin90.a2m.gz, have 86858 columns in 369 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dszA/nostruct-align/1dszA.t06-thin90.a2m.gz # 1dszA.t06-thin90.a2m with 836 sequences, total weight= 31.3187 avg weight= 0.0374626 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30048 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dszA/info/1dszA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1dszA/nostruct-align/1dszA.t06-thin90.a2m.gz, have 86933 columns in 370 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yge/nostruct-align/1yge.t06-thin90.a2m.gz # 1yge.t06-thin90.a2m with 252 sequences, total weight= 64.2765 avg weight= 0.255065 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yge/info/1yge.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1yge/nostruct-align/1yge.t06-thin90.a2m.gz, have 87772 columns in 371 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gmxA/nostruct-align/1gmxA.t06-thin90.a2m.gz # 1gmxA.t06-thin90.a2m with 2952 sequences, total weight= 2952 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0996 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gmxA/info/1gmxA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gmxA/nostruct-align/1gmxA.t06-thin90.a2m.gz, have 87880 columns in 372 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fxlA/nostruct-align/1fxlA.t06-thin90.a2m.gz # 1fxlA.t06-thin90.a2m with 5214 sequences, total weight= 5214 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04209 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fxlA/info/1fxlA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1fxlA/nostruct-align/1fxlA.t06-thin90.a2m.gz, have 88047 columns in 373 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u4bA/nostruct-align/1u4bA.t06-thin90.a2m.gz # 1u4bA.t06-thin90.a2m with 815 sequences, total weight= 815 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.261 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u4bA/info/1u4bA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1u4bA/nostruct-align/1u4bA.t06-thin90.a2m.gz, have 88627 columns in 374 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u7iA/nostruct-align/1u7iA.t06-thin90.a2m.gz # 1u7iA.t06-thin90.a2m with 1430 sequences, total weight= 1430 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.967074 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u7iA/info/1u7iA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1u7iA/nostruct-align/1u7iA.t06-thin90.a2m.gz, have 88761 columns in 375 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1khiA/nostruct-align/1khiA.t06-thin90.a2m.gz # 1khiA.t06-thin90.a2m with 123 sequences, total weight= 19.7708 avg weight= 0.160738 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1khiA/info/1khiA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1khiA/nostruct-align/1khiA.t06-thin90.a2m.gz, have 88908 columns in 376 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m2dA/nostruct-align/1m2dA.t06-thin90.a2m.gz # 1m2dA.t06-thin90.a2m with 227 sequences, total weight= 135.887 avg weight= 0.598622 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30189 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m2dA/info/1m2dA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1m2dA/nostruct-align/1m2dA.t06-thin90.a2m.gz, have 89009 columns in 377 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oohA/nostruct-align/1oohA.t06-thin90.a2m.gz # 1oohA.t06-thin90.a2m with 318 sequences, total weight= 318 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.937613 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oohA/info/1oohA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1oohA/nostruct-align/1oohA.t06-thin90.a2m.gz, have 89135 columns in 378 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d4oA/nostruct-align/1d4oA.t06-thin90.a2m.gz # 1d4oA.t06-thin90.a2m with 144 sequences, total weight= 6.41449 avg weight= 0.0445451 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d4oA/info/1d4oA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1d4oA/nostruct-align/1d4oA.t06-thin90.a2m.gz, have 89312 columns in 379 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gk9A/nostruct-align/1gk9A.t06-thin90.a2m.gz # 1gk9A.t06-thin90.a2m with 183 sequences, total weight= 183 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21703 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gk9A/info/1gk9A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gk9A/nostruct-align/1gk9A.t06-thin90.a2m.gz, have 89520 columns in 380 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f46A/nostruct-align/1f46A.t06-thin90.a2m.gz # 1f46A.t06-thin90.a2m with 73 sequences, total weight= 23.3024 avg weight= 0.31921 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f46A/info/1f46A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1f46A/nostruct-align/1f46A.t06-thin90.a2m.gz, have 89659 columns in 381 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dy5A/nostruct-align/1dy5A.t06-thin90.a2m.gz # 1dy5A.t06-thin90.a2m with 203 sequences, total weight= 39.4402 avg weight= 0.194287 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dy5A/info/1dy5A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1dy5A/nostruct-align/1dy5A.t06-thin90.a2m.gz, have 89783 columns in 382 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mdc/nostruct-align/1mdc.t06-thin90.a2m.gz # 1mdc.t06-thin90.a2m with 304 sequences, total weight= 57.9005 avg weight= 0.190462 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mdc/info/1mdc.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mdc/nostruct-align/1mdc.t06-thin90.a2m.gz, have 89914 columns in 383 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q6zA/nostruct-align/1q6zA.t06-thin90.a2m.gz # 1q6zA.t06-thin90.a2m with 1872 sequences, total weight= 1872 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10466 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q6zA/info/1q6zA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1q6zA/nostruct-align/1q6zA.t06-thin90.a2m.gz, have 90438 columns in 384 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jf3A/nostruct-align/1jf3A.t06-thin90.a2m.gz # 1jf3A.t06-thin90.a2m with 1019 sequences, total weight= 1019 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22937 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jf3A/info/1jf3A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jf3A/nostruct-align/1jf3A.t06-thin90.a2m.gz, have 90585 columns in 385 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vhvA/nostruct-align/1vhvA.t06-thin90.a2m.gz # 1vhvA.t06-thin90.a2m with 1692 sequences, total weight= 1692 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12056 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vhvA/info/1vhvA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vhvA/nostruct-align/1vhvA.t06-thin90.a2m.gz, have 90836 columns in 386 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n55A/nostruct-align/1n55A.t06-thin90.a2m.gz # 1n55A.t06-thin90.a2m with 643 sequences, total weight= 31.6257 avg weight= 0.0491847 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n55A/info/1n55A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1n55A/nostruct-align/1n55A.t06-thin90.a2m.gz, have 91085 columns in 387 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mtyD/nostruct-align/1mtyD.t06-thin90.a2m.gz # 1mtyD.t06-thin90.a2m with 191 sequences, total weight= 126.493 avg weight= 0.662266 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mtyD/info/1mtyD.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mtyD/nostruct-align/1mtyD.t06-thin90.a2m.gz, have 91597 columns in 388 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o98A/nostruct-align/1o98A.t06-thin90.a2m.gz # 1o98A.t06-thin90.a2m with 1335 sequences, total weight= 1335 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15677 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o98A/info/1o98A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1o98A/nostruct-align/1o98A.t06-thin90.a2m.gz, have 92106 columns in 389 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3p/3pviA/nostruct-align/3pviA.t06-thin90.a2m.gz # 3pviA.t06-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24387 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3p/3pviA/info/3pviA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/3p/3pviA/nostruct-align/3pviA.t06-thin90.a2m.gz, have 92262 columns in 390 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uehA/nostruct-align/1uehA.t06-thin90.a2m.gz # 1uehA.t06-thin90.a2m with 544 sequences, total weight= 48.9097 avg weight= 0.0899075 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3008 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uehA/info/1uehA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1uehA/nostruct-align/1uehA.t06-thin90.a2m.gz, have 92476 columns in 391 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q9uA/nostruct-align/1q9uA.t06-thin90.a2m.gz # 1q9uA.t06-thin90.a2m with 166 sequences, total weight= 166 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17468 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q9uA/info/1q9uA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1q9uA/nostruct-align/1q9uA.t06-thin90.a2m.gz, have 92604 columns in 392 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gwuA/nostruct-align/1gwuA.t06-thin90.a2m.gz # 1gwuA.t06-thin90.a2m with 1059 sequences, total weight= 100.686 avg weight= 0.0950763 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30454 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gwuA/info/1gwuA.stride-mixed.n_notor WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1g/1gwuA/nostruct-align/1gwuA.t06-thin90.a2m.gz, have 92910 columns in 393 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n7hA/nostruct-align/1n7hA.t06-thin90.a2m.gz # 1n7hA.t06-thin90.a2m with 14453 sequences, total weight= 14453 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.934058 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n7hA/info/1n7hA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1n7hA/nostruct-align/1n7hA.t06-thin90.a2m.gz, have 93241 columns in 394 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q8fA/nostruct-align/1q8fA.t06-thin90.a2m.gz # 1q8fA.t06-thin90.a2m with 352 sequences, total weight= 332.248 avg weight= 0.943886 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30086 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q8fA/info/1q8fA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1q8fA/nostruct-align/1q8fA.t06-thin90.a2m.gz, have 93549 columns in 395 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r2zA/nostruct-align/1r2zA.t06-thin90.a2m.gz # 1r2zA.t06-thin90.a2m with 443 sequences, total weight= 73.0546 avg weight= 0.164909 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30239 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r2zA/info/1r2zA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1r2zA/nostruct-align/1r2zA.t06-thin90.a2m.gz, have 93822 columns in 396 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nwwA/nostruct-align/1nwwA.t06-thin90.a2m.gz # 1nwwA.t06-thin90.a2m with 1253 sequences, total weight= 1253 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.795178 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nwwA/info/1nwwA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nwwA/nostruct-align/1nwwA.t06-thin90.a2m.gz, have 93967 columns in 397 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oq1A/nostruct-align/1oq1A.t06-thin90.a2m.gz # 1oq1A.t06-thin90.a2m with 3 sequences, total weight= 2.42809 avg weight= 0.809364 8 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oq1A/info/1oq1A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1oq1A/nostruct-align/1oq1A.t06-thin90.a2m.gz, have 94190 columns in 398 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qstA/nostruct-align/1qstA.t06-thin90.a2m.gz # 1qstA.t06-thin90.a2m with 6044 sequences, total weight= 6044 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.820098 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qstA/info/1qstA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qstA/nostruct-align/1qstA.t06-thin90.a2m.gz, have 94350 columns in 399 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k5nB/nostruct-align/1k5nB.t06-thin90.a2m.gz # 1k5nB.t06-thin90.a2m with 1577 sequences, total weight= 1577 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28669 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k5nB/info/1k5nB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1k5nB/nostruct-align/1k5nB.t06-thin90.a2m.gz, have 94450 columns in 400 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eaqA/nostruct-align/1eaqA.t06-thin90.a2m.gz # 1eaqA.t06-thin90.a2m with 42 sequences, total weight= 5.85638 avg weight= 0.139438 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eaqA/info/1eaqA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1eaqA/nostruct-align/1eaqA.t06-thin90.a2m.gz, have 94574 columns in 401 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i6lA/nostruct-align/1i6lA.t06-thin90.a2m.gz # 1i6lA.t06-thin90.a2m with 1019 sequences, total weight= 1019 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26975 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i6lA/info/1i6lA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1i6lA/nostruct-align/1i6lA.t06-thin90.a2m.gz, have 94900 columns in 402 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xakA/nostruct-align/1xakA.t06-thin90.a2m.gz # 1xakA.t06-thin90.a2m with 3 sequences, total weight= 2.41011 avg weight= 0.803371 7 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xakA/info/1xakA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xakA/nostruct-align/1xakA.t06-thin90.a2m.gz, have 94968 columns in 403 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3s/3seb/nostruct-align/3seb.t06-thin90.a2m.gz # 3seb.t06-thin90.a2m with 113 sequences, total weight= 66.692 avg weight= 0.590194 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3s/3seb/info/3seb.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/3s/3seb/nostruct-align/3seb.t06-thin90.a2m.gz, have 95206 columns in 404 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d2vC/nostruct-align/1d2vC.t06-thin90.a2m.gz # 1d2vC.t06-thin90.a2m with 329 sequences, total weight= 258.283 avg weight= 0.785056 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30207 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d2vC/info/1d2vC.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1d2vC/nostruct-align/1d2vC.t06-thin90.a2m.gz, have 95672 columns in 405 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qv1A/nostruct-align/1qv1A.t06-thin90.a2m.gz # 1qv1A.t06-thin90.a2m with 969 sequences, total weight= 969 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10499 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qv1A/info/1qv1A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qv1A/nostruct-align/1qv1A.t06-thin90.a2m.gz, have 95859 columns in 406 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x74A/nostruct-align/1x74A.t06-thin90.a2m.gz # 1x74A.t06-thin90.a2m with 1052 sequences, total weight= 117.237 avg weight= 0.111442 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30974 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x74A/info/1x74A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1x74A/nostruct-align/1x74A.t06-thin90.a2m.gz, have 96213 columns in 407 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qreA/nostruct-align/1qreA.t06-thin90.a2m.gz # 1qreA.t06-thin90.a2m with 2840 sequences, total weight= 2840 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11823 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qreA/info/1qreA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qreA/nostruct-align/1qreA.t06-thin90.a2m.gz, have 96423 columns in 408 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ow4A/nostruct-align/1ow4A.t06-thin90.a2m.gz # 1ow4A.t06-thin90.a2m with 16 sequences, total weight= 16 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19465 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ow4A/info/1ow4A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1ow4A/nostruct-align/1ow4A.t06-thin90.a2m.gz, have 96543 columns in 409 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mw9X/nostruct-align/1mw9X.t06-thin90.a2m.gz # 1mw9X.t06-thin90.a2m with 710 sequences, total weight= 79.2087 avg weight= 0.111562 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30473 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mw9X/info/1mw9X.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mw9X/nostruct-align/1mw9X.t06-thin90.a2m.gz, have 97099 columns in 410 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n57A/nostruct-align/1n57A.t06-thin90.a2m.gz # 1n57A.t06-thin90.a2m with 1326 sequences, total weight= 1326 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10255 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n57A/info/1n57A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1n57A/nostruct-align/1n57A.t06-thin90.a2m.gz, have 97378 columns in 411 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t4bA/nostruct-align/1t4bA.t06-thin90.a2m.gz # 1t4bA.t06-thin90.a2m with 2411 sequences, total weight= 1821.73 avg weight= 0.755591 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30751 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t4bA/info/1t4bA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1t4bA/nostruct-align/1t4bA.t06-thin90.a2m.gz, have 97745 columns in 412 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mj5A/nostruct-align/1mj5A.t06-thin90.a2m.gz # 1mj5A.t06-thin90.a2m with 9660 sequences, total weight= 9660 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.65218 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mj5A/info/1mj5A.stride-mixed.n_notor WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1m/1mj5A/nostruct-align/1mj5A.t06-thin90.a2m.gz, have 98042 columns in 413 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o08A/nostruct-align/1o08A.t06-thin90.a2m.gz # 1o08A.t06-thin90.a2m with 4345 sequences, total weight= 4345 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.840381 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o08A/info/1o08A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1o08A/nostruct-align/1o08A.t06-thin90.a2m.gz, have 98263 columns in 414 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hxiA/nostruct-align/1hxiA.t06-thin90.a2m.gz # 1hxiA.t06-thin90.a2m with 6926 sequences, total weight= 6926 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.930047 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hxiA/info/1hxiA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1hxiA/nostruct-align/1hxiA.t06-thin90.a2m.gz, have 98375 columns in 415 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1od6A/nostruct-align/1od6A.t06-thin90.a2m.gz # 1od6A.t06-thin90.a2m with 1673 sequences, total weight= 1673 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03274 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1od6A/info/1od6A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1od6A/nostruct-align/1od6A.t06-thin90.a2m.gz, have 98530 columns in 416 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jbeA/nostruct-align/1jbeA.t06-thin90.a2m.gz # 1jbeA.t06-thin90.a2m with 13714 sequences, total weight= 13714 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21179 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jbeA/info/1jbeA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jbeA/nostruct-align/1jbeA.t06-thin90.a2m.gz, have 98656 columns in 417 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uzvA/nostruct-align/1uzvA.t06-thin90.a2m.gz # 1uzvA.t06-thin90.a2m with 17 sequences, total weight= 7.821 avg weight= 0.460059 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uzvA/info/1uzvA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1uzvA/nostruct-align/1uzvA.t06-thin90.a2m.gz, have 98770 columns in 418 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wehA/nostruct-align/1wehA.t06-thin90.a2m.gz # 1wehA.t06-thin90.a2m with 513 sequences, total weight= 96.5591 avg weight= 0.188224 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30553 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wehA/info/1wehA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1wehA/nostruct-align/1wehA.t06-thin90.a2m.gz, have 98941 columns in 419 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wojA/nostruct-align/1wojA.t06-thin90.a2m.gz # 1wojA.t06-thin90.a2m with 11 sequences, total weight= 3.86585 avg weight= 0.351441 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wojA/info/1wojA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1wojA/nostruct-align/1wojA.t06-thin90.a2m.gz, have 99150 columns in 420 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lyqA/nostruct-align/1lyqA.t06-thin90.a2m.gz # 1lyqA.t06-thin90.a2m with 127 sequences, total weight= 48.7204 avg weight= 0.383625 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30042 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lyqA/info/1lyqA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1lyqA/nostruct-align/1lyqA.t06-thin90.a2m.gz, have 99251 columns in 421 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dmgA/nostruct-align/1dmgA.t06-thin90.a2m.gz # 1dmgA.t06-thin90.a2m with 443 sequences, total weight= 125.382 avg weight= 0.283029 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30217 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dmgA/info/1dmgA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1dmgA/nostruct-align/1dmgA.t06-thin90.a2m.gz, have 99423 columns in 422 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bemA/nostruct-align/2bemA.t06-thin90.a2m.gz # 2bemA.t06-thin90.a2m with 141 sequences, total weight= 60.9019 avg weight= 0.431929 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3003 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bemA/info/2bemA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2b/2bemA/nostruct-align/2bemA.t06-thin90.a2m.gz, have 99593 columns in 423 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1msk/nostruct-align/1msk.t06-thin90.a2m.gz # 1msk.t06-thin90.a2m with 221 sequences, total weight= 39.6252 avg weight= 0.1793 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1msk/info/1msk.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1msk/nostruct-align/1msk.t06-thin90.a2m.gz, have 99920 columns in 424 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zceA/nostruct-align/1zceA.t06-thin90.a2m.gz # 1zceA.t06-thin90.a2m with 185 sequences, total weight= 25.8593 avg weight= 0.13978 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zceA/info/1zceA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1z/1zceA/nostruct-align/1zceA.t06-thin90.a2m.gz, have 100066 columns in 425 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xd3A/nostruct-align/1xd3A.t06-thin90.a2m.gz # 1xd3A.t06-thin90.a2m with 153 sequences, total weight= 39.7124 avg weight= 0.259558 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xd3A/info/1xd3A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xd3A/nostruct-align/1xd3A.t06-thin90.a2m.gz, have 100295 columns in 426 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y7bA/nostruct-align/1y7bA.t06-thin90.a2m.gz # 1y7bA.t06-thin90.a2m with 962 sequences, total weight= 962 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00166 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y7bA/info/1y7bA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1y7bA/nostruct-align/1y7bA.t06-thin90.a2m.gz, have 100829 columns in 427 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dkiA/nostruct-align/1dkiA.t06-thin90.a2m.gz # 1dkiA.t06-thin90.a2m with 13 sequences, total weight= 13 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13138 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dkiA/info/1dkiA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1dkiA/nostruct-align/1dkiA.t06-thin90.a2m.gz, have 101132 columns in 428 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ofzA/nostruct-align/1ofzA.t06-thin90.a2m.gz # 1ofzA.t06-thin90.a2m with 60 sequences, total weight= 60 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.962184 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ofzA/info/1ofzA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1ofzA/nostruct-align/1ofzA.t06-thin90.a2m.gz, have 101444 columns in 429 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hqsA/nostruct-align/1hqsA.t06-thin90.a2m.gz # 1hqsA.t06-thin90.a2m with 974 sequences, total weight= 88.5477 avg weight= 0.0909114 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30239 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hqsA/info/1hqsA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1hqsA/nostruct-align/1hqsA.t06-thin90.a2m.gz, have 101867 columns in 430 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1ds1A/nostruct-align/1ds1A.t06-thin90.a2m.gz # 1ds1A.t06-thin90.a2m with 579 sequences, total weight= 579 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.976289 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1ds1A/info/1ds1A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1ds1A/nostruct-align/1ds1A.t06-thin90.a2m.gz, have 102190 columns in 431 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g8qA/nostruct-align/1g8qA.t06-thin90.a2m.gz # 1g8qA.t06-thin90.a2m with 36 sequences, total weight= 13.9327 avg weight= 0.387018 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g8qA/info/1g8qA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1g8qA/nostruct-align/1g8qA.t06-thin90.a2m.gz, have 102280 columns in 432 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c7kA/nostruct-align/1c7kA.t06-thin90.a2m.gz # 1c7kA.t06-thin90.a2m with 159 sequences, total weight= 18.5416 avg weight= 0.116614 41 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c7kA/info/1c7kA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1c/1c7kA/nostruct-align/1c7kA.t06-thin90.a2m.gz, have 102412 columns in 433 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mwpA/nostruct-align/1mwpA.t06-thin90.a2m.gz # 1mwpA.t06-thin90.a2m with 31 sequences, total weight= 7.32942 avg weight= 0.236433 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mwpA/info/1mwpA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mwpA/nostruct-align/1mwpA.t06-thin90.a2m.gz, have 102508 columns in 434 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kicA/nostruct-align/1kicA.t06-thin90.a2m.gz # 1kicA.t06-thin90.a2m with 353 sequences, total weight= 319.731 avg weight= 0.905754 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30092 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kicA/info/1kicA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kicA/nostruct-align/1kicA.t06-thin90.a2m.gz, have 102825 columns in 435 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1ntyA/nostruct-align/1ntyA.t06-thin90.a2m.gz # 1ntyA.t06-thin90.a2m with 1031 sequences, total weight= 1031 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01409 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1ntyA/info/1ntyA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1ntyA/nostruct-align/1ntyA.t06-thin90.a2m.gz, have 103130 columns in 436 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1ny1A/nostruct-align/1ny1A.t06-thin90.a2m.gz # 1ny1A.t06-thin90.a2m with 1201 sequences, total weight= 1201 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.994779 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1ny1A/info/1ny1A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1ny1A/nostruct-align/1ny1A.t06-thin90.a2m.gz, have 103365 columns in 437 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o1yA/nostruct-align/1o1yA.t06-thin90.a2m.gz # 1o1yA.t06-thin90.a2m with 3528 sequences, total weight= 3528 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01731 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o1yA/info/1o1yA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1o1yA/nostruct-align/1o1yA.t06-thin90.a2m.gz, have 103595 columns in 438 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t92A/nostruct-align/1t92A.t06-thin90.a2m.gz # 1t92A.t06-thin90.a2m with 144 sequences, total weight= 18.4896 avg weight= 0.1284 42 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t92A/info/1t92A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1t92A/nostruct-align/1t92A.t06-thin90.a2m.gz, have 103703 columns in 439 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1izcA/nostruct-align/1izcA.t06-thin90.a2m.gz # 1izcA.t06-thin90.a2m with 1735 sequences, total weight= 1735 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10966 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1izcA/info/1izcA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1izcA/nostruct-align/1izcA.t06-thin90.a2m.gz, have 104002 columns in 440 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k8uA/nostruct-align/1k8uA.t06-thin90.a2m.gz # 1k8uA.t06-thin90.a2m with 181 sequences, total weight= 39.1194 avg weight= 0.21613 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k8uA/info/1k8uA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1k8uA/nostruct-align/1k8uA.t06-thin90.a2m.gz, have 104091 columns in 441 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ig0A/nostruct-align/1ig0A.t06-thin90.a2m.gz # 1ig0A.t06-thin90.a2m with 175 sequences, total weight= 175 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16478 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ig0A/info/1ig0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1ig0A/nostruct-align/1ig0A.t06-thin90.a2m.gz, have 104408 columns in 442 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fi2A/nostruct-align/1fi2A.t06-thin90.a2m.gz # 1fi2A.t06-thin90.a2m with 1238 sequences, total weight= 1238 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.933911 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fi2A/info/1fi2A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1fi2A/nostruct-align/1fi2A.t06-thin90.a2m.gz, have 104609 columns in 443 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1ddwA/nostruct-align/1ddwA.t06-thin90.a2m.gz # 1ddwA.t06-thin90.a2m with 67 sequences, total weight= 14.3616 avg weight= 0.214352 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1ddwA/info/1ddwA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1ddwA/nostruct-align/1ddwA.t06-thin90.a2m.gz, have 104720 columns in 444 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p1xA/nostruct-align/1p1xA.t06-thin90.a2m.gz # 1p1xA.t06-thin90.a2m with 277 sequences, total weight= 49.8326 avg weight= 0.179901 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30052 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p1xA/info/1p1xA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1p1xA/nostruct-align/1p1xA.t06-thin90.a2m.gz, have 104970 columns in 445 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ydyA/nostruct-align/1ydyA.t06-thin90.a2m.gz # 1ydyA.t06-thin90.a2m with 842 sequences, total weight= 842 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01342 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ydyA/info/1ydyA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1ydyA/nostruct-align/1ydyA.t06-thin90.a2m.gz, have 105298 columns in 446 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kw4A/nostruct-align/1kw4A.t06-thin90.a2m.gz # 1kw4A.t06-thin90.a2m with 96 sequences, total weight= 13.2467 avg weight= 0.137987 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kw4A/info/1kw4A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kw4A/nostruct-align/1kw4A.t06-thin90.a2m.gz, have 105368 columns in 447 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m4jA/nostruct-align/1m4jA.t06-thin90.a2m.gz # 1m4jA.t06-thin90.a2m with 278 sequences, total weight= 278 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27003 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m4jA/info/1m4jA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1m4jA/nostruct-align/1m4jA.t06-thin90.a2m.gz, have 105501 columns in 448 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t6cA/nostruct-align/1t6cA.t06-thin90.a2m.gz # 1t6cA.t06-thin90.a2m with 2334 sequences, total weight= 2334 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10038 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t6cA/info/1t6cA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1t6cA/nostruct-align/1t6cA.t06-thin90.a2m.gz, have 105807 columns in 449 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w27A/nostruct-align/1w27A.t06-thin90.a2m.gz # 1w27A.t06-thin90.a2m with 359 sequences, total weight= 52.852 avg weight= 0.14722 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w27A/info/1w27A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1w27A/nostruct-align/1w27A.t06-thin90.a2m.gz, have 106497 columns in 450 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o7nA/nostruct-align/1o7nA.t06-thin90.a2m.gz # 1o7nA.t06-thin90.a2m with 1134 sequences, total weight= 1134 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.951161 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o7nA/info/1o7nA.stride-mixed.n_notor WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1o/1o7nA/nostruct-align/1o7nA.t06-thin90.a2m.gz, have 106944 columns in 451 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1ak0/nostruct-align/1ak0.t06-thin90.a2m.gz # 1ak0.t06-thin90.a2m with 123 sequences, total weight= 123 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.185 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1ak0/info/1ak0.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1a/1ak0/nostruct-align/1ak0.t06-thin90.a2m.gz, have 107208 columns in 452 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/25/256bA/nostruct-align/256bA.t06-thin90.a2m.gz # 256bA.t06-thin90.a2m with 22 sequences, total weight= 11.9231 avg weight= 0.541961 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/25/256bA/info/256bA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/25/256bA/nostruct-align/256bA.t06-thin90.a2m.gz, have 107314 columns in 453 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q2hA/nostruct-align/1q2hA.t06-thin90.a2m.gz # 1q2hA.t06-thin90.a2m with 16 sequences, total weight= 7.37307 avg weight= 0.460817 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q2hA/info/1q2hA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1q2hA/nostruct-align/1q2hA.t06-thin90.a2m.gz, have 107377 columns in 454 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h5qA/nostruct-align/1h5qA.t06-thin90.a2m.gz # 1h5qA.t06-thin90.a2m with 12163 sequences, total weight= 12163 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16349 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h5qA/info/1h5qA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1h5qA/nostruct-align/1h5qA.t06-thin90.a2m.gz, have 107637 columns in 455 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rgxA/nostruct-align/1rgxA.t06-thin90.a2m.gz # 1rgxA.t06-thin90.a2m with 16 sequences, total weight= 3.50284 avg weight= 0.218928 19 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rgxA/info/1rgxA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rgxA/nostruct-align/1rgxA.t06-thin90.a2m.gz, have 107726 columns in 456 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tyv/nostruct-align/1tyv.t06-thin90.a2m.gz # 1tyv.t06-thin90.a2m with 7 sequences, total weight= 3.53059 avg weight= 0.504369 10 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tyv/info/1tyv.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1tyv/nostruct-align/1tyv.t06-thin90.a2m.gz, have 108268 columns in 457 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tqhA/nostruct-align/1tqhA.t06-thin90.a2m.gz # 1tqhA.t06-thin90.a2m with 12539 sequences, total weight= 12539 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.704788 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tqhA/info/1tqhA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1tqhA/nostruct-align/1tqhA.t06-thin90.a2m.gz, have 108510 columns in 458 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fdr/nostruct-align/1fdr.t06-thin90.a2m.gz # 1fdr.t06-thin90.a2m with 2576 sequences, total weight= 2576 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0161 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fdr/info/1fdr.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1fdr/nostruct-align/1fdr.t06-thin90.a2m.gz, have 108754 columns in 459 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1chd/nostruct-align/1chd.t06-thin90.a2m.gz # 1chd.t06-thin90.a2m with 427 sequences, total weight= 39.4276 avg weight= 0.0923362 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30092 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1chd/info/1chd.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1c/1chd/nostruct-align/1chd.t06-thin90.a2m.gz, have 108952 columns in 460 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a3c/nostruct-align/1a3c.t06-thin90.a2m.gz # 1a3c.t06-thin90.a2m with 1554 sequences, total weight= 1554 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07461 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a3c/info/1a3c.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1a/1a3c/nostruct-align/1a3c.t06-thin90.a2m.gz, have 109118 columns in 461 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fyeA/nostruct-align/1fyeA.t06-thin90.a2m.gz # 1fyeA.t06-thin90.a2m with 994 sequences, total weight= 994 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01911 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fyeA/info/1fyeA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1fyeA/nostruct-align/1fyeA.t06-thin90.a2m.gz, have 109338 columns in 462 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ia8A/nostruct-align/1ia8A.t06-thin90.a2m.gz # 1ia8A.t06-thin90.a2m with 13121 sequences, total weight= 13121 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15262 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ia8A/info/1ia8A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1ia8A/nostruct-align/1ia8A.t06-thin90.a2m.gz, have 109610 columns in 463 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k5nA/nostruct-align/1k5nA.t06-thin90.a2m.gz # 1k5nA.t06-thin90.a2m with 2373 sequences, total weight= 2373 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27994 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k5nA/info/1k5nA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1k5nA/nostruct-align/1k5nA.t06-thin90.a2m.gz, have 109886 columns in 464 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hfuA/nostruct-align/1hfuA.t06-thin90.a2m.gz # 1hfuA.t06-thin90.a2m with 1041 sequences, total weight= 1041 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10984 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hfuA/info/1hfuA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1hfuA/nostruct-align/1hfuA.t06-thin90.a2m.gz, have 110386 columns in 465 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1ym3A/nostruct-align/1ym3A.t06-thin90.a2m.gz # 1ym3A.t06-thin90.a2m with 501 sequences, total weight= 259.895 avg weight= 0.518752 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30766 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1ym3A/info/1ym3A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1ym3A/nostruct-align/1ym3A.t06-thin90.a2m.gz, have 110579 columns in 466 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e30A/nostruct-align/1e30A.t06-thin90.a2m.gz # 1e30A.t06-thin90.a2m with 708 sequences, total weight= 708 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.988331 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e30A/info/1e30A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1e30A/nostruct-align/1e30A.t06-thin90.a2m.gz, have 110732 columns in 467 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rttA/nostruct-align/1rttA.t06-thin90.a2m.gz # 1rttA.t06-thin90.a2m with 1755 sequences, total weight= 1755 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.952138 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rttA/info/1rttA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rttA/nostruct-align/1rttA.t06-thin90.a2m.gz, have 110906 columns in 468 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fl0A/nostruct-align/1fl0A.t06-thin90.a2m.gz # 1fl0A.t06-thin90.a2m with 724 sequences, total weight= 112.382 avg weight= 0.155224 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30609 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fl0A/info/1fl0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1fl0A/nostruct-align/1fl0A.t06-thin90.a2m.gz, have 111070 columns in 469 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tovA/nostruct-align/1tovA.t06-thin90.a2m.gz # 1tovA.t06-thin90.a2m with 275 sequences, total weight= 78.5942 avg weight= 0.285797 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30316 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tovA/info/1tovA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1tovA/nostruct-align/1tovA.t06-thin90.a2m.gz, have 111167 columns in 470 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dqeA/nostruct-align/1dqeA.t06-thin90.a2m.gz # 1dqeA.t06-thin90.a2m with 150 sequences, total weight= 150 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11251 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dqeA/info/1dqeA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1dqeA/nostruct-align/1dqeA.t06-thin90.a2m.gz, have 111304 columns in 471 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i0lA/nostruct-align/1i0lA.t06-thin90.a2m.gz # 1i0lA.t06-thin90.a2m with 1848 sequences, total weight= 1848 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04248 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i0lA/info/1i0lA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1i0lA/nostruct-align/1i0lA.t06-thin90.a2m.gz, have 111496 columns in 472 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fcyA/nostruct-align/1fcyA.t06-thin90.a2m.gz # 1fcyA.t06-thin90.a2m with 1165 sequences, total weight= 1165 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.968329 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fcyA/info/1fcyA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1fcyA/nostruct-align/1fcyA.t06-thin90.a2m.gz, have 111732 columns in 473 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nox/nostruct-align/1nox.t06-thin90.a2m.gz # 1nox.t06-thin90.a2m with 1319 sequences, total weight= 1319 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00073 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nox/info/1nox.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nox/nostruct-align/1nox.t06-thin90.a2m.gz, have 111932 columns in 474 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ug4A/nostruct-align/1ug4A.t06-thin90.a2m.gz # 1ug4A.t06-thin90.a2m with 167 sequences, total weight= 19.264 avg weight= 0.115353 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ug4A/info/1ug4A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1ug4A/nostruct-align/1ug4A.t06-thin90.a2m.gz, have 111992 columns in 475 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1onwA/nostruct-align/1onwA.t06-thin90.a2m.gz # 1onwA.t06-thin90.a2m with 3210 sequences, total weight= 3210 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.875081 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1onwA/info/1onwA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1onwA/nostruct-align/1onwA.t06-thin90.a2m.gz, have 112368 columns in 476 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t0pB/nostruct-align/1t0pB.t06-thin90.a2m.gz # 1t0pB.t06-thin90.a2m with 35 sequences, total weight= 11.6654 avg weight= 0.333297 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t0pB/info/1t0pB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1t0pB/nostruct-align/1t0pB.t06-thin90.a2m.gz, have 112454 columns in 477 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ijqA/nostruct-align/1ijqA.t06-thin90.a2m.gz # 1ijqA.t06-thin90.a2m with 1971 sequences, total weight= 1971 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.937471 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ijqA/info/1ijqA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1ijqA/nostruct-align/1ijqA.t06-thin90.a2m.gz, have 112762 columns in 478 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e1hA/nostruct-align/1e1hA.t06-thin90.a2m.gz # 1e1hA.t06-thin90.a2m with 29 sequences, total weight= 9.13298 avg weight= 0.31493 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e1hA/info/1e1hA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1e1hA/nostruct-align/1e1hA.t06-thin90.a2m.gz, have 112997 columns in 479 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nepA/nostruct-align/1nepA.t06-thin90.a2m.gz # 1nepA.t06-thin90.a2m with 124 sequences, total weight= 124 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22291 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nepA/info/1nepA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nepA/nostruct-align/1nepA.t06-thin90.a2m.gz, have 113127 columns in 480 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w41A/nostruct-align/1w41A.t06-thin90.a2m.gz # 1w41A.t06-thin90.a2m with 398 sequences, total weight= 148.082 avg weight= 0.372066 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30614 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w41A/info/1w41A.stride-mixed.n_notor WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1w/1w41A/nostruct-align/1w41A.t06-thin90.a2m.gz, have 113226 columns in 481 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s2wA/nostruct-align/1s2wA.t06-thin90.a2m.gz # 1s2wA.t06-thin90.a2m with 647 sequences, total weight= 214.122 avg weight= 0.330946 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31171 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s2wA/info/1s2wA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1s2wA/nostruct-align/1s2wA.t06-thin90.a2m.gz, have 113484 columns in 482 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u60A/nostruct-align/1u60A.t06-thin90.a2m.gz # 1u60A.t06-thin90.a2m with 188 sequences, total weight= 48.3361 avg weight= 0.257107 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u60A/info/1u60A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1u60A/nostruct-align/1u60A.t06-thin90.a2m.gz, have 113793 columns in 483 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jg1A/nostruct-align/1jg1A.t06-thin90.a2m.gz # 1jg1A.t06-thin90.a2m with 14898 sequences, total weight= 14898 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.69114 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jg1A/info/1jg1A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jg1A/nostruct-align/1jg1A.t06-thin90.a2m.gz, have 114008 columns in 484 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f3uB/nostruct-align/1f3uB.t06-thin90.a2m.gz # 1f3uB.t06-thin90.a2m with 31 sequences, total weight= 17.8102 avg weight= 0.574522 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f3uB/info/1f3uB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1f3uB/nostruct-align/1f3uB.t06-thin90.a2m.gz, have 114147 columns in 485 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mxiA/nostruct-align/1mxiA.t06-thin90.a2m.gz # 1mxiA.t06-thin90.a2m with 1357 sequences, total weight= 1357 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27608 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mxiA/info/1mxiA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mxiA/nostruct-align/1mxiA.t06-thin90.a2m.gz, have 114303 columns in 486 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tbfA/nostruct-align/1tbfA.t06-thin90.a2m.gz # 1tbfA.t06-thin90.a2m with 302 sequences, total weight= 161.728 avg weight= 0.535522 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30338 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tbfA/info/1tbfA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1tbfA/nostruct-align/1tbfA.t06-thin90.a2m.gz, have 114629 columns in 487 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rh6A/nostruct-align/1rh6A.t06-thin90.a2m.gz # 1rh6A.t06-thin90.a2m with 5 sequences, total weight= 4.53672 avg weight= 0.907343 13 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rh6A/info/1rh6A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rh6A/nostruct-align/1rh6A.t06-thin90.a2m.gz, have 114684 columns in 488 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jfxA/nostruct-align/1jfxA.t06-thin90.a2m.gz # 1jfxA.t06-thin90.a2m with 247 sequences, total weight= 247 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15346 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jfxA/info/1jfxA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jfxA/nostruct-align/1jfxA.t06-thin90.a2m.gz, have 114901 columns in 489 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j79A/nostruct-align/1j79A.t06-thin90.a2m.gz # 1j79A.t06-thin90.a2m with 1011 sequences, total weight= 1011 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13252 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j79A/info/1j79A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1j79A/nostruct-align/1j79A.t06-thin90.a2m.gz, have 115244 columns in 490 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o9wA/nostruct-align/1o9wA.t06-thin90.a2m.gz # 1o9wA.t06-thin90.a2m with 2 sequences, total weight= 1.86727 avg weight= 0.933637 7 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o9wA/info/1o9wA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1o9wA/nostruct-align/1o9wA.t06-thin90.a2m.gz, have 115413 columns in 491 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m70A/nostruct-align/1m70A.t06-thin90.a2m.gz # 1m70A.t06-thin90.a2m with 1690 sequences, total weight= 1690 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01534 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m70A/info/1m70A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1m70A/nostruct-align/1m70A.t06-thin90.a2m.gz, have 115603 columns in 492 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pxzA/nostruct-align/1pxzA.t06-thin90.a2m.gz # 1pxzA.t06-thin90.a2m with 391 sequences, total weight= 391 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07464 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pxzA/info/1pxzA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1pxzA/nostruct-align/1pxzA.t06-thin90.a2m.gz, have 115949 columns in 493 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vmbA/nostruct-align/1vmbA.t06-thin90.a2m.gz # 1vmbA.t06-thin90.a2m with 318 sequences, total weight= 121.715 avg weight= 0.382752 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30327 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vmbA/info/1vmbA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vmbA/nostruct-align/1vmbA.t06-thin90.a2m.gz, have 116056 columns in 494 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bjuA/nostruct-align/2bjuA.t06-thin90.a2m.gz # 2bjuA.t06-thin90.a2m with 1152 sequences, total weight= 1152 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18588 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bjuA/info/2bjuA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2b/2bjuA/nostruct-align/2bjuA.t06-thin90.a2m.gz, have 116385 columns in 495 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lq9A/nostruct-align/1lq9A.t06-thin90.a2m.gz # 1lq9A.t06-thin90.a2m with 208 sequences, total weight= 208 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04494 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lq9A/info/1lq9A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1lq9A/nostruct-align/1lq9A.t06-thin90.a2m.gz, have 116497 columns in 496 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p90A/nostruct-align/1p90A.t06-thin90.a2m.gz # 1p90A.t06-thin90.a2m with 313 sequences, total weight= 313 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14352 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p90A/info/1p90A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1p90A/nostruct-align/1p90A.t06-thin90.a2m.gz, have 116620 columns in 497 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zin/nostruct-align/1zin.t06-thin90.a2m.gz # 1zin.t06-thin90.a2m with 2309 sequences, total weight= 2309 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.948849 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zin/info/1zin.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1z/1zin/nostruct-align/1zin.t06-thin90.a2m.gz, have 116837 columns in 498 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l5oA/nostruct-align/1l5oA.t06-thin90.a2m.gz # 1l5oA.t06-thin90.a2m with 240 sequences, total weight= 46.9673 avg weight= 0.195697 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l5oA/info/1l5oA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1l/1l5oA/nostruct-align/1l5oA.t06-thin90.a2m.gz, have 117183 columns in 499 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qddA/nostruct-align/1qddA.t06-thin90.a2m.gz # 1qddA.t06-thin90.a2m with 2353 sequences, total weight= 2353 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.972217 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qddA/info/1qddA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qddA/nostruct-align/1qddA.t06-thin90.a2m.gz, have 117327 columns in 500 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jhfA/nostruct-align/1jhfA.t06-thin90.a2m.gz # 1jhfA.t06-thin90.a2m with 792 sequences, total weight= 792 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1501 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jhfA/info/1jhfA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jhfA/nostruct-align/1jhfA.t06-thin90.a2m.gz, have 117524 columns in 501 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d4aA/nostruct-align/1d4aA.t06-thin90.a2m.gz # 1d4aA.t06-thin90.a2m with 1608 sequences, total weight= 1608 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11816 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d4aA/info/1d4aA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1d4aA/nostruct-align/1d4aA.t06-thin90.a2m.gz, have 117797 columns in 502 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rgzA/nostruct-align/1rgzA.t06-thin90.a2m.gz # 1rgzA.t06-thin90.a2m with 1352 sequences, total weight= 1352 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.995627 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rgzA/info/1rgzA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rgzA/nostruct-align/1rgzA.t06-thin90.a2m.gz, have 118160 columns in 503 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s3eA/nostruct-align/1s3eA.t06-thin90.a2m.gz # 1s3eA.t06-thin90.a2m with 10616 sequences, total weight= 10616 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.684875 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s3eA/info/1s3eA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1s3eA/nostruct-align/1s3eA.t06-thin90.a2m.gz, have 118659 columns in 504 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tn6B/nostruct-align/1tn6B.t06-thin90.a2m.gz # 1tn6B.t06-thin90.a2m with 844 sequences, total weight= 844 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01779 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tn6B/info/1tn6B.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1tn6B/nostruct-align/1tn6B.t06-thin90.a2m.gz, have 119069 columns in 505 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h80A/nostruct-align/1h80A.t06-thin90.a2m.gz # 1h80A.t06-thin90.a2m with 1081 sequences, total weight= 1081 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18768 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h80A/info/1h80A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1h/1h80A/nostruct-align/1h80A.t06-thin90.a2m.gz, have 119502 columns in 506 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sqsA/nostruct-align/1sqsA.t06-thin90.a2m.gz # 1sqsA.t06-thin90.a2m with 1790 sequences, total weight= 1790 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.912453 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sqsA/info/1sqsA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1sqsA/nostruct-align/1sqsA.t06-thin90.a2m.gz, have 119734 columns in 507 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ix9A/nostruct-align/1ix9A.t06-thin90.a2m.gz # 1ix9A.t06-thin90.a2m with 807 sequences, total weight= 37.5746 avg weight= 0.0465608 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ix9A/info/1ix9A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1ix9A/nostruct-align/1ix9A.t06-thin90.a2m.gz, have 119939 columns in 508 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n97A/nostruct-align/1n97A.t06-thin90.a2m.gz # 1n97A.t06-thin90.a2m with 5674 sequences, total weight= 5674 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01002 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n97A/info/1n97A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1n97A/nostruct-align/1n97A.t06-thin90.a2m.gz, have 120324 columns in 509 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ornA/nostruct-align/1ornA.t06-thin90.a2m.gz # 1ornA.t06-thin90.a2m with 1194 sequences, total weight= 1194 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17701 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ornA/info/1ornA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1ornA/nostruct-align/1ornA.t06-thin90.a2m.gz, have 120538 columns in 510 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pkhA/nostruct-align/1pkhA.t06-thin90.a2m.gz # 1pkhA.t06-thin90.a2m with 704 sequences, total weight= 704 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24666 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pkhA/info/1pkhA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1pkhA/nostruct-align/1pkhA.t06-thin90.a2m.gz, have 120720 columns in 511 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o5kA/nostruct-align/1o5kA.t06-thin90.a2m.gz # 1o5kA.t06-thin90.a2m with 910 sequences, total weight= 910 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29833 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o5kA/info/1o5kA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1o5kA/nostruct-align/1o5kA.t06-thin90.a2m.gz, have 121015 columns in 512 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xg0A/nostruct-align/1xg0A.t06-thin90.a2m.gz # 1xg0A.t06-thin90.a2m with 9 sequences, total weight= 5.76171 avg weight= 0.640189 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xg0A/info/1xg0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xg0A/nostruct-align/1xg0A.t06-thin90.a2m.gz, have 121091 columns in 513 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kqrA/nostruct-align/1kqrA.t06-thin90.a2m.gz # 1kqrA.t06-thin90.a2m with 66 sequences, total weight= 7.76006 avg weight= 0.117577 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kqrA/info/1kqrA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kqrA/nostruct-align/1kqrA.t06-thin90.a2m.gz, have 121251 columns in 514 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bjvA/nostruct-align/2bjvA.t06-thin90.a2m.gz # 2bjvA.t06-thin90.a2m with 6560 sequences, total weight= 6560 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14707 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bjvA/info/2bjvA.stride-mixed.n_notor WARNING: skipping n, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/2b/2bjvA/nostruct-align/2bjvA.t06-thin90.a2m.gz, have 121487 columns in 515 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xeoA/nostruct-align/1xeoA.t06-thin90.a2m.gz # 1xeoA.t06-thin90.a2m with 557 sequences, total weight= 53.456 avg weight= 0.0959712 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30206 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xeoA/info/1xeoA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xeoA/nostruct-align/1xeoA.t06-thin90.a2m.gz, have 121652 columns in 516 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tif/nostruct-align/1tif.t06-thin90.a2m.gz # 1tif.t06-thin90.a2m with 312 sequences, total weight= 12.3273 avg weight= 0.0395104 37 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tif/info/1tif.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1tif/nostruct-align/1tif.t06-thin90.a2m.gz, have 121728 columns in 517 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dqpA/nostruct-align/1dqpA.t06-thin90.a2m.gz # 1dqpA.t06-thin90.a2m with 2683 sequences, total weight= 2683 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09319 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dqpA/info/1dqpA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1dqpA/nostruct-align/1dqpA.t06-thin90.a2m.gz, have 121958 columns in 518 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nn5A/nostruct-align/1nn5A.t06-thin90.a2m.gz # 1nn5A.t06-thin90.a2m with 10476 sequences, total weight= 10476 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00219 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nn5A/info/1nn5A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1nn5A/nostruct-align/1nn5A.t06-thin90.a2m.gz, have 122162 columns in 519 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1z2uA/nostruct-align/1z2uA.t06-thin90.a2m.gz # 1z2uA.t06-thin90.a2m with 1076 sequences, total weight= 512.972 avg weight= 0.47674 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31549 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1z2uA/info/1z2uA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1z/1z2uA/nostruct-align/1z2uA.t06-thin90.a2m.gz, have 122312 columns in 520 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ucrA/nostruct-align/1ucrA.t06-thin90.a2m.gz # 1ucrA.t06-thin90.a2m with 14 sequences, total weight= 5.98814 avg weight= 0.427724 19 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ucrA/info/1ucrA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1ucrA/nostruct-align/1ucrA.t06-thin90.a2m.gz, have 122386 columns in 521 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q7lB/nostruct-align/1q7lB.t06-thin90.a2m.gz # 1q7lB.t06-thin90.a2m with 40 sequences, total weight= 4.86028 avg weight= 0.121507 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q7lB/info/1q7lB.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1q7lB/nostruct-align/1q7lB.t06-thin90.a2m.gz, have 122474 columns in 522 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s95A/nostruct-align/1s95A.t06-thin90.a2m.gz # 1s95A.t06-thin90.a2m with 1175 sequences, total weight= 1175 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13677 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s95A/info/1s95A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1s95A/nostruct-align/1s95A.t06-thin90.a2m.gz, have 122798 columns in 523 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2a0b/nostruct-align/2a0b.t06-thin90.a2m.gz # 2a0b.t06-thin90.a2m with 49 sequences, total weight= 43.8954 avg weight= 0.895824 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2a0b/info/2a0b.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2a/2a0b/nostruct-align/2a0b.t06-thin90.a2m.gz, have 122916 columns in 524 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t2dA/nostruct-align/1t2dA.t06-thin90.a2m.gz # 1t2dA.t06-thin90.a2m with 1674 sequences, total weight= 1674 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0669 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t2dA/info/1t2dA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1t2dA/nostruct-align/1t2dA.t06-thin90.a2m.gz, have 123231 columns in 525 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rg8A/nostruct-align/1rg8A.t06-thin90.a2m.gz # 1rg8A.t06-thin90.a2m with 243 sequences, total weight= 114.622 avg weight= 0.471695 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30169 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rg8A/info/1rg8A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rg8A/nostruct-align/1rg8A.t06-thin90.a2m.gz, have 123372 columns in 526 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1guqA/nostruct-align/1guqA.t06-thin90.a2m.gz # 1guqA.t06-thin90.a2m with 732 sequences, total weight= 732 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26273 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1guqA/info/1guqA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1guqA/nostruct-align/1guqA.t06-thin90.a2m.gz, have 123719 columns in 527 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1go3F/nostruct-align/1go3F.t06-thin90.a2m.gz # 1go3F.t06-thin90.a2m with 29 sequences, total weight= 19.9021 avg weight= 0.68628 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1go3F/info/1go3F.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1go3F/nostruct-align/1go3F.t06-thin90.a2m.gz, have 123826 columns in 528 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2blnA/nostruct-align/2blnA.t06-thin90.a2m.gz # 2blnA.t06-thin90.a2m with 1168 sequences, total weight= 1168 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28537 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2blnA/info/2blnA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2b/2blnA/nostruct-align/2blnA.t06-thin90.a2m.gz, have 124124 columns in 529 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1ju3A/nostruct-align/1ju3A.t06-thin90.a2m.gz # 1ju3A.t06-thin90.a2m with 10008 sequences, total weight= 10008 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.920327 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1ju3A/info/1ju3A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1ju3A/nostruct-align/1ju3A.t06-thin90.a2m.gz, have 124694 columns in 530 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rcqA/nostruct-align/1rcqA.t06-thin90.a2m.gz # 1rcqA.t06-thin90.a2m with 1595 sequences, total weight= 1595 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12397 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rcqA/info/1rcqA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rcqA/nostruct-align/1rcqA.t06-thin90.a2m.gz, have 125051 columns in 531 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q6oA/nostruct-align/1q6oA.t06-thin90.a2m.gz # 1q6oA.t06-thin90.a2m with 2370 sequences, total weight= 2370 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01578 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q6oA/info/1q6oA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1q6oA/nostruct-align/1q6oA.t06-thin90.a2m.gz, have 125264 columns in 532 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pe9A/nostruct-align/1pe9A.t06-thin90.a2m.gz # 1pe9A.t06-thin90.a2m with 297 sequences, total weight= 297 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12827 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pe9A/info/1pe9A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1pe9A/nostruct-align/1pe9A.t06-thin90.a2m.gz, have 125625 columns in 533 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2ayh/nostruct-align/2ayh.t06-thin90.a2m.gz # 2ayh.t06-thin90.a2m with 659 sequences, total weight= 659 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15978 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2ayh/info/2ayh.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2a/2ayh/nostruct-align/2ayh.t06-thin90.a2m.gz, have 125839 columns in 534 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qqqA/nostruct-align/1qqqA.t06-thin90.a2m.gz # 1qqqA.t06-thin90.a2m with 374 sequences, total weight= 43.5758 avg weight= 0.116513 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qqqA/info/1qqqA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qqqA/nostruct-align/1qqqA.t06-thin90.a2m.gz, have 126103 columns in 535 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ucdA/nostruct-align/1ucdA.t06-thin90.a2m.gz # 1ucdA.t06-thin90.a2m with 608 sequences, total weight= 385.043 avg weight= 0.633295 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30745 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ucdA/info/1ucdA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1u/1ucdA/nostruct-align/1ucdA.t06-thin90.a2m.gz, have 126293 columns in 536 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xqoA/nostruct-align/1xqoA.t06-thin90.a2m.gz # 1xqoA.t06-thin90.a2m with 9 sequences, total weight= 6.44386 avg weight= 0.715984 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xqoA/info/1xqoA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xqoA/nostruct-align/1xqoA.t06-thin90.a2m.gz, have 126546 columns in 537 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w99A/nostruct-align/1w99A.t06-thin90.a2m.gz # 1w99A.t06-thin90.a2m with 133 sequences, total weight= 133 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25597 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w99A/info/1w99A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1w99A/nostruct-align/1w99A.t06-thin90.a2m.gz, have 127104 columns in 538 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o6sB/nostruct-align/1o6sB.t06-thin90.a2m.gz # 1o6sB.t06-thin90.a2m with 5724 sequences, total weight= 5724 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20883 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o6sB/info/1o6sB.stride-mixed.n_notor WARNING: skipping s, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1o/1o6sB/nostruct-align/1o6sB.t06-thin90.a2m.gz, have 127208 columns in 539 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jigA/nostruct-align/1jigA.t06-thin90.a2m.gz # 1jigA.t06-thin90.a2m with 535 sequences, total weight= 535 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21594 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jigA/info/1jigA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1j/1jigA/nostruct-align/1jigA.t06-thin90.a2m.gz, have 127354 columns in 540 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g8kA/nostruct-align/1g8kA.t06-thin90.a2m.gz # 1g8kA.t06-thin90.a2m with 1296 sequences, total weight= 1296 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12429 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g8kA/info/1g8kA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1g8kA/nostruct-align/1g8kA.t06-thin90.a2m.gz, have 128176 columns in 541 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qwyA/nostruct-align/1qwyA.t06-thin90.a2m.gz # 1qwyA.t06-thin90.a2m with 1425 sequences, total weight= 1425 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11159 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qwyA/info/1qwyA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1qwyA/nostruct-align/1qwyA.t06-thin90.a2m.gz, have 128410 columns in 542 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r26A/nostruct-align/1r26A.t06-thin90.a2m.gz # 1r26A.t06-thin90.a2m with 4174 sequences, total weight= 4174 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01819 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r26A/info/1r26A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1r26A/nostruct-align/1r26A.t06-thin90.a2m.gz, have 128523 columns in 543 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vioA/nostruct-align/1vioA.t06-thin90.a2m.gz # 1vioA.t06-thin90.a2m with 1910 sequences, total weight= 1379.32 avg weight= 0.722158 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30928 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vioA/info/1vioA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vioA/nostruct-align/1vioA.t06-thin90.a2m.gz, have 128753 columns in 544 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i0vA/nostruct-align/1i0vA.t06-thin90.a2m.gz # 1i0vA.t06-thin90.a2m with 36 sequences, total weight= 14.7484 avg weight= 0.409678 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i0vA/info/1i0vA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1i0vA/nostruct-align/1i0vA.t06-thin90.a2m.gz, have 128857 columns in 545 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3b/3bamA/nostruct-align/3bamA.t06-thin90.a2m.gz # 3bamA.t06-thin90.a2m with 4 sequences, total weight= 3.87272 avg weight= 0.96818 9 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3b/3bamA/info/3bamA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/3b/3bamA/nostruct-align/3bamA.t06-thin90.a2m.gz, have 129063 columns in 546 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iq4A/nostruct-align/1iq4A.t06-thin90.a2m.gz # 1iq4A.t06-thin90.a2m with 427 sequences, total weight= 38.4998 avg weight= 0.0901636 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iq4A/info/1iq4A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1iq4A/nostruct-align/1iq4A.t06-thin90.a2m.gz, have 129242 columns in 547 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gyxA/nostruct-align/1gyxA.t06-thin90.a2m.gz # 1gyxA.t06-thin90.a2m with 10 sequences, total weight= 5.09672 avg weight= 0.509672 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gyxA/info/1gyxA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gyxA/nostruct-align/1gyxA.t06-thin90.a2m.gz, have 129318 columns in 548 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o9rA/nostruct-align/1o9rA.t06-thin90.a2m.gz # 1o9rA.t06-thin90.a2m with 538 sequences, total weight= 538 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16976 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o9rA/info/1o9rA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1o9rA/nostruct-align/1o9rA.t06-thin90.a2m.gz, have 129480 columns in 549 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i60A/nostruct-align/1i60A.t06-thin90.a2m.gz # 1i60A.t06-thin90.a2m with 1466 sequences, total weight= 1466 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.869821 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i60A/info/1i60A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1i/1i60A/nostruct-align/1i60A.t06-thin90.a2m.gz, have 129758 columns in 550 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t1dA/nostruct-align/1t1dA.t06-thin90.a2m.gz # 1t1dA.t06-thin90.a2m with 370 sequences, total weight= 88.5215 avg weight= 0.239247 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30507 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t1dA/info/1t1dA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1t1dA/nostruct-align/1t1dA.t06-thin90.a2m.gz, have 129858 columns in 551 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kkoA/nostruct-align/1kkoA.t06-thin90.a2m.gz # 1kkoA.t06-thin90.a2m with 1413 sequences, total weight= 1413 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1817 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kkoA/info/1kkoA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1kkoA/nostruct-align/1kkoA.t06-thin90.a2m.gz, have 130269 columns in 552 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bhuA/nostruct-align/2bhuA.t06-thin90.a2m.gz # 2bhuA.t06-thin90.a2m with 2602 sequences, total weight= 2602 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00468 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bhuA/info/2bhuA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/2b/2bhuA/nostruct-align/2bhuA.t06-thin90.a2m.gz, have 130849 columns in 553 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sauA/nostruct-align/1sauA.t06-thin90.a2m.gz # 1sauA.t06-thin90.a2m with 110 sequences, total weight= 18.6097 avg weight= 0.169179 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sauA/info/1sauA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1sauA/nostruct-align/1sauA.t06-thin90.a2m.gz, have 130963 columns in 554 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r4pA/nostruct-align/1r4pA.t06-thin90.a2m.gz # 1r4pA.t06-thin90.a2m with 153 sequences, total weight= 153 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21999 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r4pA/info/1r4pA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1r4pA/nostruct-align/1r4pA.t06-thin90.a2m.gz, have 131244 columns in 555 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s1dA/nostruct-align/1s1dA.t06-thin90.a2m.gz # 1s1dA.t06-thin90.a2m with 38 sequences, total weight= 11.5108 avg weight= 0.302916 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s1dA/info/1s1dA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1s1dA/nostruct-align/1s1dA.t06-thin90.a2m.gz, have 131561 columns in 556 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1y81A/nostruct-align/1y81A.t06-thin90.a2m.gz # 1y81A.t06-thin90.a2m with 605 sequences, total weight= 84.5845 avg weight= 0.139809 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3039 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1y81A/info/1y81A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1y81A/nostruct-align/1y81A.t06-thin90.a2m.gz, have 131677 columns in 557 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gca/nostruct-align/1gca.t06-thin90.a2m.gz # 1gca.t06-thin90.a2m with 2745 sequences, total weight= 2745 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.92691 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gca/info/1gca.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1g/1gca/nostruct-align/1gca.t06-thin90.a2m.gz, have 131986 columns in 558 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3e/3eipA/nostruct-align/3eipA.t06-thin90.a2m.gz # 3eipA.t06-thin90.a2m with 8 sequences, total weight= 2.82005 avg weight= 0.352506 12 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3e/3eipA/info/3eipA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/3e/3eipA/nostruct-align/3eipA.t06-thin90.a2m.gz, have 132070 columns in 559 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vlaA/nostruct-align/1vlaA.t06-thin90.a2m.gz # 1vlaA.t06-thin90.a2m with 713 sequences, total weight= 713 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11114 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vlaA/info/1vlaA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vlaA/nostruct-align/1vlaA.t06-thin90.a2m.gz, have 132214 columns in 560 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mfmA/nostruct-align/1mfmA.t06-thin90.a2m.gz # 1mfmA.t06-thin90.a2m with 521 sequences, total weight= 74.6104 avg weight= 0.143206 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30176 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mfmA/info/1mfmA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mfmA/nostruct-align/1mfmA.t06-thin90.a2m.gz, have 132367 columns in 561 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1ks9A/nostruct-align/1ks9A.t06-thin90.a2m.gz # 1ks9A.t06-thin90.a2m with 7358 sequences, total weight= 7358 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.825051 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1ks9A/info/1ks9A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1k/1ks9A/nostruct-align/1ks9A.t06-thin90.a2m.gz, have 132658 columns in 562 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1whi/nostruct-align/1whi.t06-thin90.a2m.gz # 1whi.t06-thin90.a2m with 353 sequences, total weight= 19.0433 avg weight= 0.0539469 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1whi/info/1whi.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1w/1whi/nostruct-align/1whi.t06-thin90.a2m.gz, have 132780 columns in 563 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1ayl/nostruct-align/1ayl.t06-thin90.a2m.gz # 1ayl.t06-thin90.a2m with 401 sequences, total weight= 230.757 avg weight= 0.575455 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30267 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1ayl/info/1ayl.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1a/1ayl/nostruct-align/1ayl.t06-thin90.a2m.gz, have 133312 columns in 564 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vns/nostruct-align/1vns.t06-thin90.a2m.gz # 1vns.t06-thin90.a2m with 80 sequences, total weight= 80 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1341 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vns/info/1vns.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vns/nostruct-align/1vns.t06-thin90.a2m.gz, have 133886 columns in 565 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q1fA/nostruct-align/1q1fA.t06-thin90.a2m.gz # 1q1fA.t06-thin90.a2m with 1068 sequences, total weight= 1068 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18443 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q1fA/info/1q1fA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1q/1q1fA/nostruct-align/1q1fA.t06-thin90.a2m.gz, have 134034 columns in 566 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/5n/5nul/nostruct-align/5nul.t06-thin90.a2m.gz # 5nul.t06-thin90.a2m with 1595 sequences, total weight= 1595 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0193 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/5n/5nul/info/5nul.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/5n/5nul/nostruct-align/5nul.t06-thin90.a2m.gz, have 134172 columns in 567 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fiuA/nostruct-align/1fiuA.t06-thin90.a2m.gz # 1fiuA.t06-thin90.a2m with 5 sequences, total weight= 3.19348 avg weight= 0.638695 12 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fiuA/info/1fiuA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1f/1fiuA/nostruct-align/1fiuA.t06-thin90.a2m.gz, have 134458 columns in 568 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pfvA/nostruct-align/1pfvA.t06-thin90.a2m.gz # 1pfvA.t06-thin90.a2m with 3057 sequences, total weight= 3057 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09769 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pfvA/info/1pfvA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1p/1pfvA/nostruct-align/1pfvA.t06-thin90.a2m.gz, have 135005 columns in 569 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1orc/nostruct-align/1orc.t06-thin90.a2m.gz # 1orc.t06-thin90.a2m with 6 sequences, total weight= 3.83526 avg weight= 0.63921 14 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1orc/info/1orc.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1orc/nostruct-align/1orc.t06-thin90.a2m.gz, have 135069 columns in 570 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mhnA/nostruct-align/1mhnA.t06-thin90.a2m.gz # 1mhnA.t06-thin90.a2m with 66 sequences, total weight= 21.6733 avg weight= 0.328383 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mhnA/info/1mhnA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1mhnA/nostruct-align/1mhnA.t06-thin90.a2m.gz, have 135128 columns in 571 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1csh/nostruct-align/1csh.t06-thin90.a2m.gz # 1csh.t06-thin90.a2m with 631 sequences, total weight= 124.115 avg weight= 0.196696 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30452 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1csh/info/1csh.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1c/1csh/nostruct-align/1csh.t06-thin90.a2m.gz, have 135563 columns in 572 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t1jA/nostruct-align/1t1jA.t06-thin90.a2m.gz # 1t1jA.t06-thin90.a2m with 5 sequences, total weight= 5 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18295 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t1jA/info/1t1jA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1t/1t1jA/nostruct-align/1t1jA.t06-thin90.a2m.gz, have 135682 columns in 573 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rl0A/nostruct-align/1rl0A.t06-thin90.a2m.gz # 1rl0A.t06-thin90.a2m with 151 sequences, total weight= 151 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18579 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rl0A/info/1rl0A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rl0A/nostruct-align/1rl0A.t06-thin90.a2m.gz, have 135937 columns in 574 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d2nA/nostruct-align/1d2nA.t06-thin90.a2m.gz # 1d2nA.t06-thin90.a2m with 10028 sequences, total weight= 10028 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.962198 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d2nA/info/1d2nA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1d/1d2nA/nostruct-align/1d2nA.t06-thin90.a2m.gz, have 136183 columns in 575 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e4cP/nostruct-align/1e4cP.t06-thin90.a2m.gz # 1e4cP.t06-thin90.a2m with 663 sequences, total weight= 663 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20817 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e4cP/info/1e4cP.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1e/1e4cP/nostruct-align/1e4cP.t06-thin90.a2m.gz, have 136389 columns in 576 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ogqA/nostruct-align/1ogqA.t06-thin90.a2m.gz # 1ogqA.t06-thin90.a2m with 8871 sequences, total weight= 8871 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.971888 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ogqA/info/1ogqA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1ogqA/nostruct-align/1ogqA.t06-thin90.a2m.gz, have 136702 columns in 577 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v6sA/nostruct-align/1v6sA.t06-thin90.a2m.gz # 1v6sA.t06-thin90.a2m with 515 sequences, total weight= 15.0338 avg weight= 0.0291918 41 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v6sA/info/1v6sA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1v6sA/nostruct-align/1v6sA.t06-thin90.a2m.gz, have 137092 columns in 578 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1njhA/nostruct-align/1njhA.t06-thin90.a2m.gz # 1njhA.t06-thin90.a2m with 14 sequences, total weight= 3.49835 avg weight= 0.249882 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1njhA/info/1njhA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1n/1njhA/nostruct-align/1njhA.t06-thin90.a2m.gz, have 137200 columns in 579 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xfsA/nostruct-align/1xfsA.t06-thin90.a2m.gz # 1xfsA.t06-thin90.a2m with 1085 sequences, total weight= 1085 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.846744 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xfsA/info/1xfsA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1x/1xfsA/nostruct-align/1xfsA.t06-thin90.a2m.gz, have 137354 columns in 580 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vr9A/nostruct-align/1vr9A.t06-thin90.a2m.gz # 1vr9A.t06-thin90.a2m with 205 sequences, total weight= 58.9345 avg weight= 0.287486 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30153 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vr9A/info/1vr9A.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vr9A/nostruct-align/1vr9A.t06-thin90.a2m.gz, have 137475 columns in 581 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sfxA/nostruct-align/1sfxA.t06-thin90.a2m.gz # 1sfxA.t06-thin90.a2m with 75 sequences, total weight= 75 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24817 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sfxA/info/1sfxA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1s/1sfxA/nostruct-align/1sfxA.t06-thin90.a2m.gz, have 137584 columns in 582 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vhsA/nostruct-align/1vhsA.t06-thin90.a2m.gz # 1vhsA.t06-thin90.a2m with 8291 sequences, total weight= 8291 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.792115 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vhsA/info/1vhsA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vhsA/nostruct-align/1vhsA.t06-thin90.a2m.gz, have 137749 columns in 583 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1muwA/nostruct-align/1muwA.t06-thin90.a2m.gz # 1muwA.t06-thin90.a2m with 1249 sequences, total weight= 1249 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.998573 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1muwA/info/1muwA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1m/1muwA/nostruct-align/1muwA.t06-thin90.a2m.gz, have 138135 columns in 584 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rhcA/nostruct-align/1rhcA.t06-thin90.a2m.gz # 1rhcA.t06-thin90.a2m with 1353 sequences, total weight= 1353 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11049 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rhcA/info/1rhcA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1r/1rhcA/nostruct-align/1rhcA.t06-thin90.a2m.gz, have 138465 columns in 585 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1orvA/nostruct-align/1orvA.t06-thin90.a2m.gz # 1orvA.t06-thin90.a2m with 8504 sequences, total weight= 8504 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.795087 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1orvA/info/1orvA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1o/1orvA/nostruct-align/1orvA.t06-thin90.a2m.gz, have 139193 columns in 586 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vbiA/nostruct-align/1vbiA.t06-thin90.a2m.gz # 1vbiA.t06-thin90.a2m with 186 sequences, total weight= 47.5558 avg weight= 0.255676 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vbiA/info/1vbiA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1v/1vbiA/nostruct-align/1vbiA.t06-thin90.a2m.gz, have 139533 columns in 587 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yiiA/nostruct-align/1yiiA.t06-thin90.a2m.gz # 1yiiA.t06-thin90.a2m with 363 sequences, total weight= 88.9476 avg weight= 0.245035 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30151 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yiiA/info/1yiiA.stride-mixed.n_notor # After reading /projects/compbio/experiments/models.97/pdb/1y/1yiiA/nostruct-align/1yiiA.t06-thin90.a2m.gz, have 139849 columns in 588 chains # command:CPU_time= 3424.52 sec, elapsed time= 3448.92 sec) # command:# ReportNetQualityForCrossTrainTo quality-reports/dunbrack-30pc-1763-t06-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-n_notor-from-empty.train ok. # command:# Training Net with 5 estimation cycles. Epoch: 1 2.60022 cross_bits=2.54977 objective=0.361247 new best Epoch: 2 2.53504 cross_bits=2.54287 objective=0.368143 new best Epoch: 3 2.5311 cross_bits=2.54067 objective=0.370345 new best Epoch: 4 2.52948 cross_bits=2.53941 objective=0.371607 new best Epoch: 5 2.52833 cross_bits=2.53832 objective=0.372698 new best, reshuffling # Network initialization done # command:# ReportNeuralNet networks/dunbrack-30pc-1763-t06-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-n_notor-from-empty.net ok. # Network initialization done # Neural network printed. # command:CPU_time= 3706.16 sec, elapsed time= 3730.65 sec) # command:# Network initialization done # command:Equilibrating dunbrack-30pc-1763-t06-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-n_notor-from-empty.net # command:# Training Net with 5 estimation cycles. Epoch: 6 2.52688 cross_bits=2.53967 objective=0.37135 worse network accepted, reshuffling Epoch: 7 2.52599 cross_bits=2.53663 objective=0.374387 new best Epoch: 8 2.52421 cross_bits=2.53469 objective=0.37633 new best Epoch: 9 2.52178 cross_bits=2.53176 objective=0.379257 new best Epoch: 10 2.51782 cross_bits=2.52667 objective=0.384348 new best # Network initialization done # command:# ReportNeuralNet networks/dunbrack-30pc-1763-t06-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-n_notor-from-empty.net ok. # Network initialization done # Neural network printed. # command:CPU_time= 4008.34 sec, elapsed time= 4032.93 sec) # command:# Network initialization done # command:Equilibrating dunbrack-30pc-1763-t06-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-n_notor-from-empty.net # command:# Training Net with 5 estimation cycles. Epoch: 11 2.51145 cross_bits=2.51712 objective=0.39442 new best Epoch: 12 2.494 cross_bits=2.48866 objective=0.490914 new best Epoch: 13 2.44036 cross_bits=2.4049 objective=0.674997 new best Epoch: 14 2.34678 cross_bits=2.31035 objective=0.799482 new best Epoch: 15 2.26663 cross_bits=2.23532 objective=0.900812 new best # Network initialization done # command:# ReportNeuralNet networks/dunbrack-30pc-1763-t06-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-n_notor-from-empty.net ok. # Network initialization done # Neural network printed. # command:CPU_time= 4310.56 sec, elapsed time= 4335.23 sec) # command:# Network initialization done # command:Equilibrating dunbrack-30pc-1763-t06-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-n_notor-from-empty.net # command:# Training Net with 5 estimation cycles. Epoch: 16 2.2148 cross_bits=2.19906 objective=0.95082 new best Epoch: 17 2.15951 cross_bits=2.14381 objective=1.02205 new best Epoch: 18 2.10758 cross_bits=2.09557 objective=1.09279 new best Epoch: 19 2.06543 cross_bits=2.06464 objective=1.14923 new best Epoch: 20 2.03513 cross_bits=2.04481 objective=1.18313 new best, reshuffling # Network initialization done # command:# ReportNeuralNet networks/dunbrack-30pc-1763-t06-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-n_notor-from-empty.net ok. # Network initialization done # Neural network printed. # command:CPU_time= 4613.02 sec, elapsed time= 4637.81 sec) # command:# Network initialization done # command:Equilibrating dunbrack-30pc-1763-t06-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-n_notor-from-empty.net # command:# Training Net with 50 estimation cycles. Epoch: 21 2.03722 cross_bits=2.02052 objective=1.20818 new best Epoch: 22 2.00935 cross_bits=1.999 objective=1.24098 new best Epoch: 23 1.99046 cross_bits=1.98335 objective=1.26281 new best Epoch: 24 1.97576 cross_bits=1.97115 objective=1.27895 new best, reshuffling Epoch: 25 1.9642 cross_bits=1.96358 objective=1.28357 new best Epoch: 26 1.9536 cross_bits=1.9553 objective=1.29424 new best Epoch: 27 1.94443 cross_bits=1.94797 objective=1.30316 new best Epoch: 28 1.93617 cross_bits=1.94128 objective=1.3115 new best Epoch: 29 1.92856 cross_bits=1.93507 objective=1.31915 new best Epoch: 30 1.92145 cross_bits=1.92914 objective=1.32645 new best Epoch: 31 1.91469 cross_bits=1.92345 objective=1.33329 new best Epoch: 32 1.9082 cross_bits=1.91788 objective=1.34012 new best Epoch: 33 1.90187 cross_bits=1.91239 objective=1.34687 new best, reshuffling Epoch: 34 1.89304 cross_bits=1.92805 objective=1.32418 worse network accepted, reshuffling Epoch: 35 1.89109 cross_bits=1.89764 objective=1.36885 new best Epoch: 36 1.88489 cross_bits=1.89212 objective=1.37566 new best Epoch: 37 1.8786 cross_bits=1.88663 objective=1.38263 new best Epoch: 38 1.87242 cross_bits=1.88127 objective=1.3892 new best Epoch: 39 1.86641 cross_bits=1.8761 objective=1.39548 new best Epoch: 40 1.86063 cross_bits=1.87117 objective=1.40168 new best, reshuffling Epoch: 41 1.85229 cross_bits=1.86838 objective=1.40635 new best Epoch: 42 1.84719 cross_bits=1.86403 objective=1.41214 new best Epoch: 43 1.84234 cross_bits=1.85996 objective=1.41757 new best Epoch: 44 1.83777 cross_bits=1.85616 objective=1.42266 new best Epoch: 45 1.83347 cross_bits=1.85261 objective=1.42778 new best Epoch: 46 1.82942 cross_bits=1.84928 objective=1.43203 new best Epoch: 47 1.8256 cross_bits=1.84614 objective=1.43625 new best Epoch: 48 1.82198 cross_bits=1.84319 objective=1.44035 new best Epoch: 49 1.81855 cross_bits=1.8404 objective=1.44402 new best Epoch: 50 1.81529 cross_bits=1.83775 objective=1.44745 new best Epoch: 51 1.81217 cross_bits=1.83523 objective=1.45099 new best Epoch: 52 1.8092 cross_bits=1.83282 objective=1.45463 new best Epoch: 53 1.80635 cross_bits=1.83053 objective=1.45776 new best Epoch: 54 1.80362 cross_bits=1.82833 objective=1.46126 new best, reshuffling Epoch: 55 1.80253 cross_bits=1.82552 objective=1.46396 new best, reshuffling Epoch: 56 1.79842 cross_bits=1.82309 objective=1.46887 new best Epoch: 57 1.79597 cross_bits=1.82122 objective=1.47134 new best Epoch: 58 1.79359 cross_bits=1.81939 objective=1.47408 new best Epoch: 59 1.79131 cross_bits=1.81763 objective=1.47646 new best Epoch: 60 1.78912 cross_bits=1.81593 objective=1.47893 new best Epoch: 61 1.78699 cross_bits=1.81429 objective=1.48152 new best Epoch: 62 1.78493 cross_bits=1.8127 objective=1.48391 new best Epoch: 63 1.78292 cross_bits=1.81116 objective=1.48589 new best Epoch: 64 1.78098 cross_bits=1.80967 objective=1.48782 new best Epoch: 65 1.77908 cross_bits=1.80823 objective=1.48976 new best Epoch: 66 1.77722 cross_bits=1.80683 objective=1.49178 new best, reshuffling Epoch: 67 1.77629 cross_bits=1.80686 objective=1.49213 new best Epoch: 68 1.77418 cross_bits=1.80534 objective=1.49372 new best Epoch: 69 1.77242 cross_bits=1.80394 objective=1.49588 new best Epoch: 70 1.77072 cross_bits=1.8026 objective=1.49788 new best # Network initialization done # command:# ReportNeuralNet networks/dunbrack-30pc-1763-t06-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-n_notor-from-empty.net ok. # Network initialization done # Neural network printed. # command:CPU_time= 7275.85 sec, elapsed time= 7301.4 sec) # command:# Network initialization done # command:# Training Net with 50 estimation cycles. Epoch: 71 1.76981 cross_bits=1.8023 objective=1.49544 worse network accepted, reshuffling Epoch: 72 1.7666 cross_bits=1.80872 objective=1.48547 worse network rejected, reshuffling Epoch: 73 1.76837 cross_bits=1.79919 objective=1.50135 new best Epoch: 74 1.7666 cross_bits=1.79812 objective=1.50278 new best Epoch: 75 1.76503 cross_bits=1.79705 objective=1.50449 new best Epoch: 76 1.7635 cross_bits=1.79598 objective=1.50611 new best Epoch: 77 1.76201 cross_bits=1.79494 objective=1.50767 new best Epoch: 78 1.76055 cross_bits=1.79392 objective=1.50909 new best Epoch: 79 1.75913 cross_bits=1.79293 objective=1.51046 new best Epoch: 80 1.75774 cross_bits=1.79196 objective=1.51193 new best Epoch: 81 1.75638 cross_bits=1.79101 objective=1.51325 new best, reshuffling Epoch: 82 1.7567 cross_bits=1.79063 objective=1.51379 new best Epoch: 83 1.75532 cross_bits=1.78973 objective=1.51484 new best Epoch: 84 1.75396 cross_bits=1.78885 objective=1.51612 new best Epoch: 85 1.75266 cross_bits=1.788 objective=1.51721 new best Epoch: 86 1.75139 cross_bits=1.78718 objective=1.51828 new best Epoch: 87 1.75016 cross_bits=1.78638 objective=1.51974 new best Epoch: 88 1.74896 cross_bits=1.7856 objective=1.5211 new best Epoch: 89 1.74779 cross_bits=1.78484 objective=1.52217 new best Epoch: 90 1.74664 cross_bits=1.78409 objective=1.52323 new best Epoch: 91 1.74551 cross_bits=1.78336 objective=1.52463 new best Epoch: 92 1.74441 cross_bits=1.78265 objective=1.52581 new best Epoch: 93 1.74333 cross_bits=1.78195 objective=1.52687 new best Epoch: 94 1.74227 cross_bits=1.78127 objective=1.52802 new best, reshuffling Epoch: 95 1.74192 cross_bits=1.78196 objective=1.52743 worse network accepted, reshuffling Epoch: 96 1.7404 cross_bits=1.77894 objective=1.53024 new best Epoch: 97 1.73924 cross_bits=1.7783 objective=1.5312 new best Epoch: 98 1.73822 cross_bits=1.77766 objective=1.5324 new best Epoch: 99 1.73724 cross_bits=1.77701 objective=1.53338 new best Epoch: 100 1.73628 cross_bits=1.77638 objective=1.5342 new best, reshuffling Epoch: 101 1.73469 cross_bits=1.77545 objective=1.53528 new best Epoch: 102 1.73384 cross_bits=1.77485 objective=1.53614 new best Epoch: 103 1.73294 cross_bits=1.77425 objective=1.53708 new best Epoch: 104 1.73205 cross_bits=1.77365 objective=1.53799 new best, reshuffling Epoch: 105 1.73125 cross_bits=1.77414 objective=1.53815 new best Epoch: 106 1.7304 cross_bits=1.77351 objective=1.53911 new best Epoch: 107 1.72954 cross_bits=1.77291 objective=1.53995 new best, reshuffling Epoch: 108 1.72867 cross_bits=1.77401 objective=1.5368 worse network accepted, reshuffling Epoch: 109 1.72866 cross_bits=1.77622 objective=1.53827 improvement accepted Epoch: 110 1.7279 cross_bits=1.77572 objective=1.53882 improvement accepted, reshuffling Epoch: 111 1.72687 cross_bits=1.80409 objective=1.50654 worse network rejected, reshuffling Epoch: 112 1.7268 cross_bits=1.77088 objective=1.54182 new best Epoch: 113 1.72595 cross_bits=1.77046 objective=1.54235 new best Epoch: 114 1.72514 cross_bits=1.76997 objective=1.54325 new best Epoch: 115 1.72435 cross_bits=1.76946 objective=1.54375 new best Epoch: 116 1.72357 cross_bits=1.76896 objective=1.54459 new best Epoch: 117 1.72281 cross_bits=1.76846 objective=1.54543 new best Epoch: 118 1.72206 cross_bits=1.76796 objective=1.54625 new best Epoch: 119 1.72131 cross_bits=1.76746 objective=1.54686 new best Epoch: 120 1.72058 cross_bits=1.76697 objective=1.5476 new best # Network initialization done # command:# ReportNeuralNet networks/dunbrack-30pc-1763-t06-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-n_notor-from-empty.net ok. # Network initialization done # Neural network printed. # command:CPU_time= 9920.73 sec, elapsed time= 9947.33 sec) # command:# ReportNetQualityForTestTo quality-reports/dunbrack-30pc-1763-t06-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-n_notor-from-empty.120.test ok. # command:# Testing net dunbrack-30pc-1763-t06-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-n_notor-from-empty.net # Network initialization done # command:# Network initialization done # command:Equilibrating dunbrack-30pc-1763-t06-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-n_notor-from-empty.net # command:# Training Net with 50 estimation cycles. Epoch: 121 1.75906 cross_bits=1.79864 objective=1.50685 new best Epoch: 122 1.74312 cross_bits=1.79193 objective=1.51579 new best Epoch: 123 1.73776 cross_bits=1.78818 objective=1.5215 new best Epoch: 124 1.73422 cross_bits=1.78549 objective=1.52519 new best Epoch: 125 1.73153 cross_bits=1.78336 objective=1.52801 new best, reshuffling Epoch: 126 1.73038 cross_bits=1.78 objective=1.53565 new best Epoch: 127 1.72845 cross_bits=1.77847 objective=1.53755 new best Epoch: 128 1.72681 cross_bits=1.77708 objective=1.53956 new best Epoch: 129 1.72534 cross_bits=1.77581 objective=1.54132 new best Epoch: 130 1.724 cross_bits=1.77463 objective=1.54349 new best Epoch: 131 1.72275 cross_bits=1.77353 objective=1.54486 new best Epoch: 132 1.72158 cross_bits=1.77251 objective=1.54609 new best Epoch: 133 1.72048 cross_bits=1.77154 objective=1.5474 new best Epoch: 134 1.71943 cross_bits=1.77063 objective=1.5486 new best Epoch: 135 1.71842 cross_bits=1.76976 objective=1.54996 new best Epoch: 136 1.71746 cross_bits=1.76892 objective=1.55096 new best Epoch: 137 1.71653 cross_bits=1.76812 objective=1.5521 new best Epoch: 138 1.71563 cross_bits=1.76734 objective=1.55336 new best Epoch: 139 1.71476 cross_bits=1.76659 objective=1.55443 new best Epoch: 140 1.71391 cross_bits=1.76586 objective=1.55551 new best Epoch: 141 1.71309 cross_bits=1.76515 objective=1.55643 new best Epoch: 142 1.71228 cross_bits=1.76446 objective=1.55712 new best Epoch: 143 1.71149 cross_bits=1.76379 objective=1.55816 new best Epoch: 144 1.71073 cross_bits=1.76314 objective=1.55912 new best, reshuffling Epoch: 145 1.70909 cross_bits=1.75914 objective=1.56102 new best Epoch: 146 1.70833 cross_bits=1.75858 objective=1.56191 new best Epoch: 147 1.7076 cross_bits=1.75799 objective=1.56279 new best Epoch: 148 1.70688 cross_bits=1.75738 objective=1.56394 new best Epoch: 149 1.70617 cross_bits=1.75677 objective=1.56478 new best Epoch: 150 1.70548 cross_bits=1.75617 objective=1.56558 new best Epoch: 151 1.7048 cross_bits=1.75558 objective=1.56633 new best Epoch: 152 1.70412 cross_bits=1.75499 objective=1.56718 new best Epoch: 153 1.70346 cross_bits=1.75442 objective=1.56806 new best Epoch: 154 1.70281 cross_bits=1.75385 objective=1.56879 new best Epoch: 155 1.70217 cross_bits=1.75329 objective=1.56963 new best Epoch: 156 1.70154 cross_bits=1.75274 objective=1.5705 new best, reshuffling Epoch: 157 1.70076 cross_bits=1.75531 objective=1.57147 new best Epoch: 158 1.70013 cross_bits=1.75468 objective=1.57237 new best Epoch: 159 1.69949 cross_bits=1.75406 objective=1.57317 new best, reshuffling Epoch: 160 1.69988 cross_bits=1.75004 objective=1.57544 new best Epoch: 161 1.69919 cross_bits=1.74962 objective=1.576 new best, reshuffling Epoch: 162 1.69786 cross_bits=1.74849 objective=1.57706 new best Epoch: 163 1.69712 cross_bits=1.748 objective=1.57764 new best Epoch: 164 1.69655 cross_bits=1.74752 objective=1.5782 new best Epoch: 165 1.69598 cross_bits=1.74704 objective=1.57903 new best Epoch: 166 1.69543 cross_bits=1.74658 objective=1.57969 new best Epoch: 167 1.69488 cross_bits=1.74612 objective=1.58024 new best Epoch: 168 1.69433 cross_bits=1.74567 objective=1.58104 new best Epoch: 169 1.6938 cross_bits=1.74522 objective=1.58177 new best Epoch: 170 1.69327 cross_bits=1.74478 objective=1.58239 new best # Network initialization done # command:# ReportNeuralNet networks/dunbrack-30pc-1763-t06-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-n_notor-from-empty.net ok. # Network initialization done # Neural network printed. # command:CPU_time= 12650.3 sec, elapsed time= 12678.3 sec) # command:# Network initialization done # command:# Training Net with 50 estimation cycles. Epoch: 171 1.69278 cross_bits=1.74641 objective=1.57861 worse network accepted, reshuffling Epoch: 172 1.69333 cross_bits=1.74428 objective=1.58435 new best, reshuffling Epoch: 173 1.69251 cross_bits=1.74345 objective=1.58452 new best Epoch: 174 1.69195 cross_bits=1.7431 objective=1.58506 new best Epoch: 175 1.69144 cross_bits=1.74271 objective=1.58551 new best Epoch: 176 1.69093 cross_bits=1.74231 objective=1.58631 new best Epoch: 177 1.69043 cross_bits=1.74191 objective=1.58689 new best Epoch: 178 1.68993 cross_bits=1.74152 objective=1.58746 new best Epoch: 179 1.68944 cross_bits=1.74113 objective=1.58823 new best Epoch: 180 1.68896 cross_bits=1.74075 objective=1.58874 new best Epoch: 181 1.68848 cross_bits=1.74036 objective=1.58945 new best Epoch: 182 1.688 cross_bits=1.73998 objective=1.59022 new best Epoch: 183 1.68754 cross_bits=1.73961 objective=1.59086 new best Epoch: 184 1.68708 cross_bits=1.73924 objective=1.59147 new best Epoch: 185 1.68662 cross_bits=1.73887 objective=1.59201 new best Epoch: 186 1.68617 cross_bits=1.73851 objective=1.59238 new best Epoch: 187 1.68572 cross_bits=1.73815 objective=1.59302 new best Epoch: 188 1.68528 cross_bits=1.73779 objective=1.59357 new best Epoch: 189 1.68484 cross_bits=1.73744 objective=1.59401 new best Epoch: 190 1.68441 cross_bits=1.73709 objective=1.59449 new best Epoch: 191 1.68398 cross_bits=1.73675 objective=1.59484 new best Epoch: 192 1.68356 cross_bits=1.7364 objective=1.59551 new best Epoch: 193 1.68314 cross_bits=1.73607 objective=1.59606 new best Epoch: 194 1.68272 cross_bits=1.73573 objective=1.59658 new best Epoch: 195 1.68231 cross_bits=1.7354 objective=1.59722 new best Epoch: 196 1.68191 cross_bits=1.73508 objective=1.59754 new best Epoch: 197 1.68151 cross_bits=1.73475 objective=1.59799 new best Epoch: 198 1.68111 cross_bits=1.73444 objective=1.59834 new best Epoch: 199 1.68072 cross_bits=1.73412 objective=1.5988 new best Epoch: 200 1.68033 cross_bits=1.73381 objective=1.59925 new best Epoch: 201 1.67994 cross_bits=1.7335 objective=1.59974 new best Epoch: 202 1.67956 cross_bits=1.7332 objective=1.60005 new best Epoch: 203 1.67919 cross_bits=1.7329 objective=1.60049 new best Epoch: 204 1.67881 cross_bits=1.7326 objective=1.601 new best Epoch: 205 1.67845 cross_bits=1.73231 objective=1.60143 new best Epoch: 206 1.67808 cross_bits=1.73202 objective=1.60195 new best Epoch: 207 1.67772 cross_bits=1.73174 objective=1.60228 new best, reshuffling Epoch: 208 1.67765 cross_bits=1.73686 objective=1.59561 worse network accepted, reshuffling Epoch: 209 1.67719 cross_bits=1.73291 objective=1.59798 improvement accepted Epoch: 210 1.67653 cross_bits=1.73267 objective=1.59865 improvement accepted, reshuffling Epoch: 211 1.67673 cross_bits=1.73381 objective=1.60302 new best Epoch: 212 1.67631 cross_bits=1.73365 objective=1.60318 new best Epoch: 213 1.67597 cross_bits=1.73345 objective=1.60357 new best Epoch: 214 1.67562 cross_bits=1.73325 objective=1.60381 new best Epoch: 215 1.67528 cross_bits=1.73305 objective=1.60408 new best Epoch: 216 1.67495 cross_bits=1.73285 objective=1.60429 new best Epoch: 217 1.67461 cross_bits=1.73264 objective=1.60461 new best Epoch: 218 1.67429 cross_bits=1.73244 objective=1.60504 new best Epoch: 219 1.67396 cross_bits=1.73223 objective=1.60526 new best Epoch: 220 1.67364 cross_bits=1.73203 objective=1.60557 new best # Network initialization done # command:# ReportNeuralNet networks/dunbrack-30pc-1763-t06-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-n_notor-from-empty.net ok. # Network initialization done # Neural network printed. # command:CPU_time= 15299.4 sec, elapsed time= 15339.3 sec) # command:# ReportNetQualityForTestTo quality-reports/dunbrack-30pc-1763-t06-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-n_notor-from-empty.220.test ok. # command:# Testing net dunbrack-30pc-1763-t06-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-n_notor-from-empty.net # Network initialization done # command:# Network initialization done # command:Equilibrating dunbrack-30pc-1763-t06-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-n_notor-from-empty.net # command:# Training Net with 50 estimation cycles. Epoch: 221 1.68733 cross_bits=1.74272 objective=1.58352 new best Epoch: 222 1.68417 cross_bits=1.74067 objective=1.58703 new best, reshuffling Epoch: 223 1.68262 cross_bits=1.73915 objective=1.59286 new best, reshuffling Epoch: 224 1.68049 cross_bits=1.73769 objective=1.59525 new best Epoch: 225 1.6794 cross_bits=1.7368 objective=1.59664 new best Epoch: 226 1.67858 cross_bits=1.73606 objective=1.59792 new best Epoch: 227 1.67787 cross_bits=1.73543 objective=1.59897 new best Epoch: 228 1.67725 cross_bits=1.73488 objective=1.59972 new best Epoch: 229 1.67668 cross_bits=1.73437 objective=1.60049 new best Epoch: 230 1.67616 cross_bits=1.73391 objective=1.60118 new best Epoch: 231 1.67567 cross_bits=1.73348 objective=1.60179 new best Epoch: 232 1.67521 cross_bits=1.73308 objective=1.60236 new best Epoch: 233 1.67477 cross_bits=1.73269 objective=1.60314 new best Epoch: 234 1.67435 cross_bits=1.73233 objective=1.60372 new best Epoch: 235 1.67395 cross_bits=1.73198 objective=1.6041 new best Epoch: 236 1.67356 cross_bits=1.73165 objective=1.60456 new best Epoch: 237 1.67318 cross_bits=1.73133 objective=1.60491 new best Epoch: 238 1.67282 cross_bits=1.73102 objective=1.60533 new best Epoch: 239 1.67246 cross_bits=1.73072 objective=1.60567 new best, reshuffling Epoch: 240 1.67263 cross_bits=1.73434 objective=1.59667 worse network rejected, reshuffling Epoch: 241 1.67187 cross_bits=1.72995 objective=1.60335 worse network accepted, reshuffling Epoch: 242 1.67207 cross_bits=1.72881 objective=1.60601 new best Epoch: 243 1.67178 cross_bits=1.72857 objective=1.60631 new best Epoch: 244 1.67146 cross_bits=1.7283 objective=1.60681 new best Epoch: 245 1.67114 cross_bits=1.72804 objective=1.6072 new best Epoch: 246 1.67082 cross_bits=1.72777 objective=1.60763 new best Epoch: 247 1.67052 cross_bits=1.72752 objective=1.60799 new best Epoch: 248 1.67022 cross_bits=1.72727 objective=1.60845 new best Epoch: 249 1.66992 cross_bits=1.72703 objective=1.60881 new best Epoch: 250 1.66964 cross_bits=1.72679 objective=1.60909 new best Epoch: 251 1.66935 cross_bits=1.72656 objective=1.60948 new best Epoch: 252 1.66908 cross_bits=1.72633 objective=1.60992 new best Epoch: 253 1.6688 cross_bits=1.72611 objective=1.61034 new best Epoch: 254 1.66853 cross_bits=1.7259 objective=1.6107 new best Epoch: 255 1.66827 cross_bits=1.72569 objective=1.61093 new best, reshuffling Epoch: 256 1.66817 cross_bits=1.73326 objective=1.59999 worse network accepted, reshuffling Epoch: 257 1.66735 cross_bits=1.72513 objective=1.61315 new best Epoch: 258 1.66689 cross_bits=1.72494 objective=1.61334 new best Epoch: 259 1.66666 cross_bits=1.72475 objective=1.61349 new best, reshuffling Epoch: 260 1.667 cross_bits=1.72531 objective=1.60904 worse network accepted, reshuffling Epoch: 261 1.66681 cross_bits=1.72413 objective=1.61326 improvement accepted, reshuffling Epoch: 262 1.66564 cross_bits=1.72366 objective=1.61371 new best Epoch: 263 1.6655 cross_bits=1.72348 objective=1.61411 new best, reshuffling Epoch: 264 1.66636 cross_bits=1.72318 objective=1.61402 worse network accepted, reshuffling Epoch: 265 1.66504 cross_bits=1.72392 objective=1.61443 new best Epoch: 266 1.66494 cross_bits=1.72376 objective=1.6146 new best Epoch: 267 1.66474 cross_bits=1.72361 objective=1.61496 new best Epoch: 268 1.66452 cross_bits=1.72345 objective=1.61522 new best Epoch: 269 1.66431 cross_bits=1.7233 objective=1.6155 new best Epoch: 270 1.6641 cross_bits=1.72314 objective=1.61571 new best # Network initialization done # command:# ReportNeuralNet networks/dunbrack-30pc-1763-t06-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-n_notor-from-empty.net ok. # Network initialization done # Neural network printed. # command:CPU_time= 18028.3 sec, elapsed time= 18089.9 sec) # command:# Network initialization done # command:# Training Net with 50 estimation cycles. Epoch: 271 1.66535 cross_bits=1.72234 objective=1.61602 new best Epoch: 272 1.66501 cross_bits=1.72224 objective=1.61613 new best Epoch: 273 1.66478 cross_bits=1.72211 objective=1.61639 new best Epoch: 274 1.66456 cross_bits=1.72197 objective=1.61661 new best Epoch: 275 1.66435 cross_bits=1.72183 objective=1.61674 new best Epoch: 276 1.66415 cross_bits=1.72169 objective=1.617 new best Epoch: 277 1.66394 cross_bits=1.72155 objective=1.61717 new best Epoch: 278 1.66374 cross_bits=1.72141 objective=1.61732 new best Epoch: 279 1.66355 cross_bits=1.72127 objective=1.61758 new best Epoch: 280 1.66335 cross_bits=1.72114 objective=1.6178 new best Epoch: 281 1.66316 cross_bits=1.721 objective=1.61817 new best Epoch: 282 1.66297 cross_bits=1.72087 objective=1.61841 new best Epoch: 283 1.66278 cross_bits=1.72074 objective=1.61859 new best Epoch: 284 1.6626 cross_bits=1.72062 objective=1.61879 new best Epoch: 285 1.66242 cross_bits=1.72049 objective=1.61895 new best Epoch: 286 1.66224 cross_bits=1.72036 objective=1.61914 new best, reshuffling Epoch: 287 1.6611 cross_bits=1.72039 objective=1.61886 worse network accepted, reshuffling Epoch: 288 1.66194 cross_bits=1.721 objective=1.61998 new best Epoch: 289 1.66172 cross_bits=1.7209 objective=1.62008 new best Epoch: 290 1.66156 cross_bits=1.7208 objective=1.62036 new best Epoch: 291 1.66139 cross_bits=1.72068 objective=1.62056 new best, reshuffling Epoch: 292 1.66135 cross_bits=1.71963 objective=1.6195 worse network accepted, reshuffling Epoch: 293 1.66051 cross_bits=1.71959 objective=1.62038 improvement accepted Epoch: 294 1.66047 cross_bits=1.71948 objective=1.62067 new best Epoch: 295 1.66032 cross_bits=1.71936 objective=1.62068 new best Epoch: 296 1.66016 cross_bits=1.71925 objective=1.62069 new best Epoch: 297 1.66 cross_bits=1.71914 objective=1.62066 worse network accepted, reshuffling Epoch: 298 1.66026 cross_bits=1.71929 objective=1.62136 new best Epoch: 299 1.6601 cross_bits=1.71919 objective=1.62158 new best Epoch: 300 1.65994 cross_bits=1.71909 objective=1.62193 new best Epoch: 301 1.65979 cross_bits=1.719 objective=1.6221 new best Epoch: 302 1.65964 cross_bits=1.7189 objective=1.62234 new best Epoch: 303 1.65949 cross_bits=1.71881 objective=1.62254 new best, reshuffling Epoch: 304 1.65947 cross_bits=1.71849 objective=1.62206 worse network accepted, reshuffling Epoch: 305 1.6588 cross_bits=1.71826 objective=1.62294 new best Epoch: 306 1.65868 cross_bits=1.71817 objective=1.62295 new best, reshuffling Epoch: 307 1.65873 cross_bits=1.7188 objective=1.62352 new best Epoch: 308 1.6586 cross_bits=1.7187 objective=1.62371 new best Epoch: 309 1.65846 cross_bits=1.71859 objective=1.62407 new best Epoch: 310 1.65833 cross_bits=1.71849 objective=1.62421 new best Epoch: 311 1.65819 cross_bits=1.71838 objective=1.62423 new best Epoch: 312 1.65806 cross_bits=1.71827 objective=1.62435 new best Epoch: 313 1.65793 cross_bits=1.71817 objective=1.62451 new best Epoch: 314 1.6578 cross_bits=1.71807 objective=1.62459 new best Epoch: 315 1.65767 cross_bits=1.71796 objective=1.62459 worse network accepted, reshuffling Epoch: 316 1.65785 cross_bits=1.71746 objective=1.62462 new best Epoch: 317 1.65764 cross_bits=1.71735 objective=1.62468 new best Epoch: 318 1.65751 cross_bits=1.71724 objective=1.62477 new best Epoch: 319 1.65739 cross_bits=1.71714 objective=1.62491 new best Epoch: 320 1.65726 cross_bits=1.71704 objective=1.6251 new best # Network initialization done # command:# ReportNeuralNet networks/dunbrack-30pc-1763-t06-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-n_notor-from-empty.net ok. # Network initialization done # Neural network printed. # command:CPU_time= 20674.3 sec, elapsed time= 20737.4 sec) # command:# ReportNetQualityForTestTo quality-reports/dunbrack-30pc-1763-t06-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-n_notor-from-empty.test ok. # command:# Testing net dunbrack-30pc-1763-t06-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-n_notor-from-empty.net # Network initialization done # command:# ReportTrainByChain given with no output file. # command:# ReportQvsPhatTo given with no output file. # command:# ReportUnitUsageTo given with no output file. # command:CPU_time= 20736.1 sec, elapsed time= 20799.2 sec) # command: