# command:# Prefix for input files set to # command:# Prefix for output files set to # command:# Seed set to 1147612824 # command:# Read 28 alphabets and 0 BackgroundProbs from /projects/compbio/lib/alphabet/burial.alphabet # command:Unrecognized 1th alphabet way-back-11 for BackgroundProbs that has no name Unrecognized 1th alphabet near-backbone-11 for BackgroundProbs that has no name Unrecognized 1th alphabet rel_sa10 for BackgroundProbs that has no name Unrecognized 1th alphabet abs_sa7 for BackgroundProbs that has no name Unrecognized 1th alphabet alpha11 for BackgroundProbs that has no name Unrecognized 1th alphabet Bystroff for BackgroundProbs that has no name Unrecognized 1th alphabet chi1_3 for BackgroundProbs that has no name Unrecognized 1th alphabet DSSP for BackgroundProbs that has no name Unrecognized 1th alphabet EBGHSTL for BackgroundProbs that has no name Unrecognized 1th alphabet str for BackgroundProbs that has no name Unrecognized 1th alphabet str2 for BackgroundProbs that has no name Unrecognized 1th alphabet dssp_ehl2 for BackgroundProbs that has no name Unrecognized 1th alphabet STRIDE for BackgroundProbs that has no name Unrecognized 1th alphabet EBGHTL for BackgroundProbs that has no name Unrecognized 1th alphabet stride_ehl2 for BackgroundProbs that has no name Unrecognized 1th alphabet tco for BackgroundProbs that has no name Unrecognized 1th alphabet pb for BackgroundProbs that has no name Unrecognized 1th alphabet gamma_2 for BackgroundProbs that has no name Unrecognized 1th alphabet n_sep for BackgroundProbs that has no name Unrecognized 1th alphabet o_sep for BackgroundProbs that has no name Unrecognized 1th alphabet n_notor for BackgroundProbs that has no name Unrecognized 1th alphabet o_notor for BackgroundProbs that has no name Unrecognized 1th alphabet n_notor2 for BackgroundProbs that has no name Unrecognized 1th alphabet o_notor2 for BackgroundProbs that has no name # Read 0 alphabets and 7 BackgroundProbs from /projects/compbio/lib/alphabet/dunbrack-in-scop.backgrounds # command:CPU_time= 0.007999 sec, elapsed time= 0.050567 sec) # command:# Neural network set to dunbrack-30pc-1763-t2k-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-CB-burial-14-7-from-empty.net # command:# command:# Prefix for input files set to /cse/faculty/karplus/dna/predict-2nd/testing/training-data/ # command:# reading script from file dunbrack-in-scop-2005.t2k-thin90-CB-burial-14-7 # Prefix for input files set to # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/4u/4ubpA/nostruct-align/4ubpA.t2k-thin90.a2m.gz # 4ubpA.t2k-thin90.a2m with 71 sequences, total weight= 4.6807 avg weight= 0.0659254 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/4u/4ubpA/info/4ubpA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/4u/4ubpA/nostruct-align/4ubpA.t2k-thin90.a2m.gz, have 100 columns in 1 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s0aA/nostruct-align/1s0aA.t2k-thin90.a2m.gz # 1s0aA.t2k-thin90.a2m with 1990 sequences, total weight= 614.273 avg weight= 0.30868 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32076 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s0aA/info/1s0aA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s0aA/nostruct-align/1s0aA.t2k-thin90.a2m.gz, have 528 columns in 2 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jnrA/nostruct-align/1jnrA.t2k-thin90.a2m.gz # 1jnrA.t2k-thin90.a2m with 302 sequences, total weight= 302 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04936 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jnrA/info/1jnrA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jnrA/nostruct-align/1jnrA.t2k-thin90.a2m.gz, have 1170 columns in 3 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jkeA/nostruct-align/1jkeA.t2k-thin90.a2m.gz # 1jkeA.t2k-thin90.a2m with 89 sequences, total weight= 8.17766 avg weight= 0.0918838 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jkeA/info/1jkeA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jkeA/nostruct-align/1jkeA.t2k-thin90.a2m.gz, have 1315 columns in 4 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iukA/nostruct-align/1iukA.t2k-thin90.a2m.gz # 1iukA.t2k-thin90.a2m with 118 sequences, total weight= 38.6294 avg weight= 0.327368 43 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iukA/info/1iukA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iukA/nostruct-align/1iukA.t2k-thin90.a2m.gz, have 1451 columns in 5 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2g/2gdm/nostruct-align/2gdm.t2k-thin90.a2m.gz # 2gdm.t2k-thin90.a2m with 261 sequences, total weight= 261 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27201 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2g/2gdm/info/2gdm.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/2g/2gdm/nostruct-align/2gdm.t2k-thin90.a2m.gz, have 1604 columns in 6 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1ccwA/nostruct-align/1ccwA.t2k-thin90.a2m.gz # 1ccwA.t2k-thin90.a2m with 189 sequences, total weight= 62.8717 avg weight= 0.332654 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1ccwA/info/1ccwA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1c/1ccwA/nostruct-align/1ccwA.t2k-thin90.a2m.gz, have 1741 columns in 7 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1senA/nostruct-align/1senA.t2k-thin90.a2m.gz # 1senA.t2k-thin90.a2m with 777 sequences, total weight= 777 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29108 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1senA/info/1senA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1senA/nostruct-align/1senA.t2k-thin90.a2m.gz, have 1875 columns in 8 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mtpA/nostruct-align/1mtpA.t2k-thin90.a2m.gz # 1mtpA.t2k-thin90.a2m with 321 sequences, total weight= 125.275 avg weight= 0.390265 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30423 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mtpA/info/1mtpA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mtpA/nostruct-align/1mtpA.t2k-thin90.a2m.gz, have 2195 columns in 9 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ro0A/nostruct-align/1ro0A.t2k-thin90.a2m.gz # 1ro0A.t2k-thin90.a2m with 12 sequences, total weight= 6.4283 avg weight= 0.535692 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ro0A/info/1ro0A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1ro0A/nostruct-align/1ro0A.t2k-thin90.a2m.gz, have 2405 columns in 10 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dlwA/nostruct-align/1dlwA.t2k-thin90.a2m.gz # 1dlwA.t2k-thin90.a2m with 46 sequences, total weight= 22.0109 avg weight= 0.478498 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dlwA/info/1dlwA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dlwA/nostruct-align/1dlwA.t2k-thin90.a2m.gz, have 2521 columns in 11 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o7sA/nostruct-align/1o7sA.t2k-thin90.a2m.gz # 1o7sA.t2k-thin90.a2m with 1187 sequences, total weight= 162.524 avg weight= 0.13692 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31368 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o7sA/info/1o7sA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o7sA/nostruct-align/1o7sA.t2k-thin90.a2m.gz, have 2633 columns in 12 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ixh/nostruct-align/1ixh.t2k-thin90.a2m.gz # 1ixh.t2k-thin90.a2m with 177 sequences, total weight= 80.5958 avg weight= 0.455343 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ixh/info/1ixh.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ixh/nostruct-align/1ixh.t2k-thin90.a2m.gz, have 2954 columns in 13 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pg4A/nostruct-align/1pg4A.t2k-thin90.a2m.gz # 1pg4A.t2k-thin90.a2m with 1869 sequences, total weight= 1869 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10545 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pg4A/info/1pg4A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pg4A/nostruct-align/1pg4A.t2k-thin90.a2m.gz, have 3587 columns in 14 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kwfA/nostruct-align/1kwfA.t2k-thin90.a2m.gz # 1kwfA.t2k-thin90.a2m with 45 sequences, total weight= 45 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kwfA/info/1kwfA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kwfA/nostruct-align/1kwfA.t2k-thin90.a2m.gz, have 3950 columns in 15 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b5eA/nostruct-align/1b5eA.t2k-thin90.a2m.gz # 1b5eA.t2k-thin90.a2m with 100 sequences, total weight= 34.1676 avg weight= 0.341676 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b5eA/info/1b5eA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1b/1b5eA/nostruct-align/1b5eA.t2k-thin90.a2m.gz, have 4191 columns in 16 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1km4A/nostruct-align/1km4A.t2k-thin90.a2m.gz # 1km4A.t2k-thin90.a2m with 252 sequences, total weight= 252 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25616 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1km4A/info/1km4A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1km4A/nostruct-align/1km4A.t2k-thin90.a2m.gz, have 4403 columns in 17 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gd0A/nostruct-align/1gd0A.t2k-thin90.a2m.gz # 1gd0A.t2k-thin90.a2m with 51 sequences, total weight= 31.1657 avg weight= 0.611093 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gd0A/info/1gd0A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gd0A/nostruct-align/1gd0A.t2k-thin90.a2m.gz, have 4521 columns in 18 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1ft5A/nostruct-align/1ft5A.t2k-thin90.a2m.gz # 1ft5A.t2k-thin90.a2m with 57 sequences, total weight= 57 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.868444 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1ft5A/info/1ft5A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1ft5A/nostruct-align/1ft5A.t2k-thin90.a2m.gz, have 4732 columns in 19 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ro7A/nostruct-align/1ro7A.t2k-thin90.a2m.gz # 1ro7A.t2k-thin90.a2m with 6 sequences, total weight= 3.52255 avg weight= 0.587091 12 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ro7A/info/1ro7A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1ro7A/nostruct-align/1ro7A.t2k-thin90.a2m.gz, have 4990 columns in 20 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uj2A/nostruct-align/1uj2A.t2k-thin90.a2m.gz # 1uj2A.t2k-thin90.a2m with 271 sequences, total weight= 271 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15725 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uj2A/info/1uj2A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uj2A/nostruct-align/1uj2A.t2k-thin90.a2m.gz, have 5203 columns in 21 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l7aA/nostruct-align/1l7aA.t2k-thin90.a2m.gz # 1l7aA.t2k-thin90.a2m with 253 sequences, total weight= 253 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.843561 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l7aA/info/1l7aA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1l7aA/nostruct-align/1l7aA.t2k-thin90.a2m.gz, have 5521 columns in 22 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qgvA/nostruct-align/1qgvA.t2k-thin90.a2m.gz # 1qgvA.t2k-thin90.a2m with 218 sequences, total weight= 103.319 avg weight= 0.473942 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qgvA/info/1qgvA.stride-mixed.CB-burial-14-7 WARNING: skipping a, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1q/1qgvA/nostruct-align/1qgvA.t2k-thin90.a2m.gz, have 5651 columns in 23 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o6vA/nostruct-align/1o6vA.t2k-thin90.a2m.gz # 1o6vA.t2k-thin90.a2m with 2295 sequences, total weight= 2295 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.863747 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o6vA/info/1o6vA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o6vA/nostruct-align/1o6vA.t2k-thin90.a2m.gz, have 6113 columns in 24 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fx2A/nostruct-align/1fx2A.t2k-thin90.a2m.gz # 1fx2A.t2k-thin90.a2m with 181 sequences, total weight= 177.597 avg weight= 0.9812 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fx2A/info/1fx2A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fx2A/nostruct-align/1fx2A.t2k-thin90.a2m.gz, have 6348 columns in 25 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gx3A/nostruct-align/1gx3A.t2k-thin90.a2m.gz # 1gx3A.t2k-thin90.a2m with 52 sequences, total weight= 52 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27299 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gx3A/info/1gx3A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gx3A/nostruct-align/1gx3A.t2k-thin90.a2m.gz, have 6624 columns in 26 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jhjA/nostruct-align/1jhjA.t2k-thin90.a2m.gz # 1jhjA.t2k-thin90.a2m with 22 sequences, total weight= 18.2625 avg weight= 0.830112 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jhjA/info/1jhjA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jhjA/nostruct-align/1jhjA.t2k-thin90.a2m.gz, have 6785 columns in 27 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1luqA/nostruct-align/1luqA.t2k-thin90.a2m.gz # 1luqA.t2k-thin90.a2m with 10 sequences, total weight= 8.57596 avg weight= 0.857596 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1luqA/info/1luqA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1luqA/nostruct-align/1luqA.t2k-thin90.a2m.gz, have 6904 columns in 28 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bupA/nostruct-align/1bupA.t2k-thin90.a2m.gz # 1bupA.t2k-thin90.a2m with 480 sequences, total weight= 110.412 avg weight= 0.230024 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30388 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bupA/info/1bupA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bupA/nostruct-align/1bupA.t2k-thin90.a2m.gz, have 7282 columns in 29 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ugpB/nostruct-align/1ugpB.t2k-thin90.a2m.gz # 1ugpB.t2k-thin90.a2m with 22 sequences, total weight= 13.216 avg weight= 0.600725 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ugpB/info/1ugpB.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ugpB/nostruct-align/1ugpB.t2k-thin90.a2m.gz, have 7508 columns in 30 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p6oA/nostruct-align/1p6oA.t2k-thin90.a2m.gz # 1p6oA.t2k-thin90.a2m with 352 sequences, total weight= 153.333 avg weight= 0.435605 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30134 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p6oA/info/1p6oA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p6oA/nostruct-align/1p6oA.t2k-thin90.a2m.gz, have 7664 columns in 31 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lm4A/nostruct-align/1lm4A.t2k-thin90.a2m.gz # 1lm4A.t2k-thin90.a2m with 177 sequences, total weight= 38.4885 avg weight= 0.217449 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lm4A/info/1lm4A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lm4A/nostruct-align/1lm4A.t2k-thin90.a2m.gz, have 7854 columns in 32 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i4uA/nostruct-align/1i4uA.t2k-thin90.a2m.gz # 1i4uA.t2k-thin90.a2m with 84 sequences, total weight= 84 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06382 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i4uA/info/1i4uA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i4uA/nostruct-align/1i4uA.t2k-thin90.a2m.gz, have 8035 columns in 33 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1on2A/nostruct-align/1on2A.t2k-thin90.a2m.gz # 1on2A.t2k-thin90.a2m with 229 sequences, total weight= 229 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2243 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1on2A/info/1on2A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1on2A/nostruct-align/1on2A.t2k-thin90.a2m.gz, have 8170 columns in 34 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f3uA/nostruct-align/1f3uA.t2k-thin90.a2m.gz # 1f3uA.t2k-thin90.a2m with 10 sequences, total weight= 10 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19149 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f3uA/info/1f3uA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f3uA/nostruct-align/1f3uA.t2k-thin90.a2m.gz, have 8288 columns in 35 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m0wA/nostruct-align/1m0wA.t2k-thin90.a2m.gz # 1m0wA.t2k-thin90.a2m with 30 sequences, total weight= 14.144 avg weight= 0.471467 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m0wA/info/1m0wA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m0wA/nostruct-align/1m0wA.t2k-thin90.a2m.gz, have 8769 columns in 36 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ubkL/nostruct-align/1ubkL.t2k-thin90.a2m.gz # 1ubkL.t2k-thin90.a2m with 179 sequences, total weight= 179 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22171 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ubkL/info/1ubkL.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ubkL/nostruct-align/1ubkL.t2k-thin90.a2m.gz, have 9303 columns in 37 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uekA/nostruct-align/1uekA.t2k-thin90.a2m.gz # 1uekA.t2k-thin90.a2m with 179 sequences, total weight= 179 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25042 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uekA/info/1uekA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uekA/nostruct-align/1uekA.t2k-thin90.a2m.gz, have 9571 columns in 38 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g2rA/nostruct-align/1g2rA.t2k-thin90.a2m.gz # 1g2rA.t2k-thin90.a2m with 51 sequences, total weight= 19.3527 avg weight= 0.379464 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g2rA/info/1g2rA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g2rA/nostruct-align/1g2rA.t2k-thin90.a2m.gz, have 9665 columns in 39 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s5dA/nostruct-align/1s5dA.t2k-thin90.a2m.gz # 1s5dA.t2k-thin90.a2m with 19 sequences, total weight= 15.9522 avg weight= 0.839588 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s5dA/info/1s5dA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s5dA/nostruct-align/1s5dA.t2k-thin90.a2m.gz, have 9883 columns in 40 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m40A/nostruct-align/1m40A.t2k-thin90.a2m.gz # 1m40A.t2k-thin90.a2m with 125 sequences, total weight= 111.265 avg weight= 0.890121 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m40A/info/1m40A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m40A/nostruct-align/1m40A.t2k-thin90.a2m.gz, have 10146 columns in 41 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rb9/nostruct-align/1rb9.t2k-thin90.a2m.gz # 1rb9.t2k-thin90.a2m with 120 sequences, total weight= 8.91139 avg weight= 0.0742616 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rb9/info/1rb9.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rb9/nostruct-align/1rb9.t2k-thin90.a2m.gz, have 10198 columns in 42 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t7rA/nostruct-align/1t7rA.t2k-thin90.a2m.gz # 1t7rA.t2k-thin90.a2m with 421 sequences, total weight= 421 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25853 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t7rA/info/1t7rA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t7rA/nostruct-align/1t7rA.t2k-thin90.a2m.gz, have 10448 columns in 43 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g5tA/nostruct-align/1g5tA.t2k-thin90.a2m.gz # 1g5tA.t2k-thin90.a2m with 89 sequences, total weight= 14.727 avg weight= 0.165472 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g5tA/info/1g5tA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g5tA/nostruct-align/1g5tA.t2k-thin90.a2m.gz, have 10605 columns in 44 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pj5A/nostruct-align/1pj5A.t2k-thin90.a2m.gz # 1pj5A.t2k-thin90.a2m with 822 sequences, total weight= 822 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12704 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pj5A/info/1pj5A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pj5A/nostruct-align/1pj5A.t2k-thin90.a2m.gz, have 11432 columns in 45 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d2vA/nostruct-align/1d2vA.t2k-thin90.a2m.gz # 1d2vA.t2k-thin90.a2m with 71 sequences, total weight= 16.5616 avg weight= 0.233262 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d2vA/info/1d2vA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d2vA/nostruct-align/1d2vA.t2k-thin90.a2m.gz, have 11536 columns in 46 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1osyA/nostruct-align/1osyA.t2k-thin90.a2m.gz # 1osyA.t2k-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18135 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1osyA/info/1osyA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1osyA/nostruct-align/1osyA.t2k-thin90.a2m.gz, have 11650 columns in 47 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qu9A/nostruct-align/1qu9A.t2k-thin90.a2m.gz # 1qu9A.t2k-thin90.a2m with 370 sequences, total weight= 151.681 avg weight= 0.40995 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30185 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qu9A/info/1qu9A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qu9A/nostruct-align/1qu9A.t2k-thin90.a2m.gz, have 11777 columns in 48 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sbp/nostruct-align/1sbp.t2k-thin90.a2m.gz # 1sbp.t2k-thin90.a2m with 167 sequences, total weight= 167 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14481 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sbp/info/1sbp.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sbp/nostruct-align/1sbp.t2k-thin90.a2m.gz, have 12086 columns in 49 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rqwA/nostruct-align/1rqwA.t2k-thin90.a2m.gz # 1rqwA.t2k-thin90.a2m with 116 sequences, total weight= 12.722 avg weight= 0.109672 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rqwA/info/1rqwA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rqwA/nostruct-align/1rqwA.t2k-thin90.a2m.gz, have 12293 columns in 50 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pvgA/nostruct-align/1pvgA.t2k-thin90.a2m.gz # 1pvgA.t2k-thin90.a2m with 509 sequences, total weight= 31.6416 avg weight= 0.0621643 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pvgA/info/1pvgA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pvgA/nostruct-align/1pvgA.t2k-thin90.a2m.gz, have 12671 columns in 51 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vkpA/nostruct-align/1vkpA.t2k-thin90.a2m.gz # 1vkpA.t2k-thin90.a2m with 68 sequences, total weight= 20.9639 avg weight= 0.308293 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vkpA/info/1vkpA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vkpA/nostruct-align/1vkpA.t2k-thin90.a2m.gz, have 13036 columns in 52 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hbnC/nostruct-align/1hbnC.t2k-thin90.a2m.gz # 1hbnC.t2k-thin90.a2m with 12 sequences, total weight= 2.9696 avg weight= 0.247466 14 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hbnC/info/1hbnC.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hbnC/nostruct-align/1hbnC.t2k-thin90.a2m.gz, have 13283 columns in 53 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bm8/nostruct-align/1bm8.t2k-thin90.a2m.gz # 1bm8.t2k-thin90.a2m with 15 sequences, total weight= 9.60539 avg weight= 0.64036 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bm8/info/1bm8.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bm8/nostruct-align/1bm8.t2k-thin90.a2m.gz, have 13382 columns in 54 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2s/2spcA/nostruct-align/2spcA.t2k-thin90.a2m.gz # 2spcA.t2k-thin90.a2m with 317 sequences, total weight= 317 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06589 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2s/2spcA/info/2spcA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/2s/2spcA/nostruct-align/2spcA.t2k-thin90.a2m.gz, have 13489 columns in 55 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1id0A/nostruct-align/1id0A.t2k-thin90.a2m.gz # 1id0A.t2k-thin90.a2m with 1012 sequences, total weight= 1012 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28812 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1id0A/info/1id0A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1id0A/nostruct-align/1id0A.t2k-thin90.a2m.gz, have 13635 columns in 56 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rreA/nostruct-align/1rreA.t2k-thin90.a2m.gz # 1rreA.t2k-thin90.a2m with 380 sequences, total weight= 173.824 avg weight= 0.457432 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30394 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rreA/info/1rreA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rreA/nostruct-align/1rreA.t2k-thin90.a2m.gz, have 13817 columns in 57 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a12A/nostruct-align/1a12A.t2k-thin90.a2m.gz # 1a12A.t2k-thin90.a2m with 196 sequences, total weight= 196 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04671 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a12A/info/1a12A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1a/1a12A/nostruct-align/1a12A.t2k-thin90.a2m.gz, have 14218 columns in 58 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1ht6A/nostruct-align/1ht6A.t2k-thin90.a2m.gz # 1ht6A.t2k-thin90.a2m with 640 sequences, total weight= 640 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11898 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1ht6A/info/1ht6A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1ht6A/nostruct-align/1ht6A.t2k-thin90.a2m.gz, have 14622 columns in 59 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2m/2mcm/nostruct-align/2mcm.t2k-thin90.a2m.gz # 2mcm.t2k-thin90.a2m with 5 sequences, total weight= 3.5941 avg weight= 0.718821 12 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2m/2mcm/info/2mcm.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/2m/2mcm/nostruct-align/2mcm.t2k-thin90.a2m.gz, have 14734 columns in 60 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1czpA/nostruct-align/1czpA.t2k-thin90.a2m.gz # 1czpA.t2k-thin90.a2m with 255 sequences, total weight= 82.6418 avg weight= 0.324086 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30073 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1czpA/info/1czpA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1c/1czpA/nostruct-align/1czpA.t2k-thin90.a2m.gz, have 14832 columns in 61 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ok7A/nostruct-align/1ok7A.t2k-thin90.a2m.gz # 1ok7A.t2k-thin90.a2m with 202 sequences, total weight= 79.5904 avg weight= 0.394012 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30179 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ok7A/info/1ok7A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ok7A/nostruct-align/1ok7A.t2k-thin90.a2m.gz, have 15198 columns in 62 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ojhA/nostruct-align/1ojhA.t2k-thin90.a2m.gz # 1ojhA.t2k-thin90.a2m with 5 sequences, total weight= 3.83473 avg weight= 0.766947 11 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ojhA/info/1ojhA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ojhA/nostruct-align/1ojhA.t2k-thin90.a2m.gz, have 15250 columns in 63 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pe1A/nostruct-align/1pe1A.t2k-thin90.a2m.gz # 1pe1A.t2k-thin90.a2m with 170 sequences, total weight= 20.8427 avg weight= 0.122604 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pe1A/info/1pe1A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pe1A/nostruct-align/1pe1A.t2k-thin90.a2m.gz, have 15508 columns in 64 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2p/2pvbA/nostruct-align/2pvbA.t2k-thin90.a2m.gz # 2pvbA.t2k-thin90.a2m with 586 sequences, total weight= 586 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26945 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2p/2pvbA/info/2pvbA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/2p/2pvbA/nostruct-align/2pvbA.t2k-thin90.a2m.gz, have 15615 columns in 65 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a2pA/nostruct-align/1a2pA.t2k-thin90.a2m.gz # 1a2pA.t2k-thin90.a2m with 22 sequences, total weight= 7.1617 avg weight= 0.325532 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a2pA/info/1a2pA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1a/1a2pA/nostruct-align/1a2pA.t2k-thin90.a2m.gz, have 15723 columns in 66 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jcdA/nostruct-align/1jcdA.t2k-thin90.a2m.gz # 1jcdA.t2k-thin90.a2m with 9 sequences, total weight= 5.12699 avg weight= 0.569666 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jcdA/info/1jcdA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jcdA/nostruct-align/1jcdA.t2k-thin90.a2m.gz, have 15773 columns in 67 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nu4A/nostruct-align/1nu4A.t2k-thin90.a2m.gz # 1nu4A.t2k-thin90.a2m with 1484 sequences, total weight= 1484 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24757 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nu4A/info/1nu4A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nu4A/nostruct-align/1nu4A.t2k-thin90.a2m.gz, have 15864 columns in 68 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fn9A/nostruct-align/1fn9A.t2k-thin90.a2m.gz # 1fn9A.t2k-thin90.a2m with 8 sequences, total weight= 4.86247 avg weight= 0.607809 10 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fn9A/info/1fn9A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fn9A/nostruct-align/1fn9A.t2k-thin90.a2m.gz, have 16229 columns in 69 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j77A/nostruct-align/1j77A.t2k-thin90.a2m.gz # 1j77A.t2k-thin90.a2m with 23 sequences, total weight= 18.1432 avg weight= 0.788833 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j77A/info/1j77A.stride-mixed.CB-burial-14-7 WARNING: skipping b, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1j/1j77A/nostruct-align/1j77A.t2k-thin90.a2m.gz, have 16428 columns in 70 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n1jB/nostruct-align/1n1jB.t2k-thin90.a2m.gz # 1n1jB.t2k-thin90.a2m with 125 sequences, total weight= 40.2408 avg weight= 0.321927 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n1jB/info/1n1jB.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n1jB/nostruct-align/1n1jB.t2k-thin90.a2m.gz, have 16506 columns in 71 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1btkA/nostruct-align/1btkA.t2k-thin90.a2m.gz # 1btkA.t2k-thin90.a2m with 26 sequences, total weight= 17.5928 avg weight= 0.676647 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1btkA/info/1btkA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1b/1btkA/nostruct-align/1btkA.t2k-thin90.a2m.gz, have 16666 columns in 72 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hxrA/nostruct-align/1hxrA.t2k-thin90.a2m.gz # 1hxrA.t2k-thin90.a2m with 7 sequences, total weight= 6.9318 avg weight= 0.990257 12 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hxrA/info/1hxrA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hxrA/nostruct-align/1hxrA.t2k-thin90.a2m.gz, have 16773 columns in 73 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j27A/nostruct-align/1j27A.t2k-thin90.a2m.gz # 1j27A.t2k-thin90.a2m with 20 sequences, total weight= 11.966 avg weight= 0.598298 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j27A/info/1j27A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j27A/nostruct-align/1j27A.t2k-thin90.a2m.gz, have 16871 columns in 74 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kq1A/nostruct-align/1kq1A.t2k-thin90.a2m.gz # 1kq1A.t2k-thin90.a2m with 31 sequences, total weight= 5.2299 avg weight= 0.168707 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kq1A/info/1kq1A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kq1A/nostruct-align/1kq1A.t2k-thin90.a2m.gz, have 16931 columns in 75 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1ktgA/nostruct-align/1ktgA.t2k-thin90.a2m.gz # 1ktgA.t2k-thin90.a2m with 550 sequences, total weight= 550 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07396 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1ktgA/info/1ktgA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1ktgA/nostruct-align/1ktgA.t2k-thin90.a2m.gz, have 17068 columns in 76 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ockA/nostruct-align/1ockA.t2k-thin90.a2m.gz # 1ockA.t2k-thin90.a2m with 339 sequences, total weight= 166.723 avg weight= 0.491807 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30467 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ockA/info/1ockA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ockA/nostruct-align/1ockA.t2k-thin90.a2m.gz, have 17480 columns in 77 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g61A/nostruct-align/1g61A.t2k-thin90.a2m.gz # 1g61A.t2k-thin90.a2m with 41 sequences, total weight= 10.4709 avg weight= 0.255388 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g61A/info/1g61A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g61A/nostruct-align/1g61A.t2k-thin90.a2m.gz, have 17705 columns in 78 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f60B/nostruct-align/1f60B.t2k-thin90.a2m.gz # 1f60B.t2k-thin90.a2m with 59 sequences, total weight= 15.9349 avg weight= 0.270083 31 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f60B/info/1f60B.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f60B/nostruct-align/1f60B.t2k-thin90.a2m.gz, have 17795 columns in 79 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vcc/nostruct-align/1vcc.t2k-thin90.a2m.gz # 1vcc.t2k-thin90.a2m with 11 sequences, total weight= 4.44338 avg weight= 0.403943 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vcc/info/1vcc.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vcc/nostruct-align/1vcc.t2k-thin90.a2m.gz, have 17872 columns in 80 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vc4A/nostruct-align/1vc4A.t2k-thin90.a2m.gz # 1vc4A.t2k-thin90.a2m with 455 sequences, total weight= 30.9228 avg weight= 0.0679621 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vc4A/info/1vc4A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vc4A/nostruct-align/1vc4A.t2k-thin90.a2m.gz, have 18126 columns in 81 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oxdA/nostruct-align/1oxdA.t2k-thin90.a2m.gz # 1oxdA.t2k-thin90.a2m with 46 sequences, total weight= 9.46174 avg weight= 0.20569 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oxdA/info/1oxdA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oxdA/nostruct-align/1oxdA.t2k-thin90.a2m.gz, have 18352 columns in 82 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q7zA/nostruct-align/1q7zA.t2k-thin90.a2m.gz # 1q7zA.t2k-thin90.a2m with 766 sequences, total weight= 206.904 avg weight= 0.27011 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30218 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q7zA/info/1q7zA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q7zA/nostruct-align/1q7zA.t2k-thin90.a2m.gz, have 18911 columns in 83 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l6pA/nostruct-align/1l6pA.t2k-thin90.a2m.gz # 1l6pA.t2k-thin90.a2m with 41 sequences, total weight= 14.8548 avg weight= 0.362312 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l6pA/info/1l6pA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1l6pA/nostruct-align/1l6pA.t2k-thin90.a2m.gz, have 19032 columns in 84 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sjwA/nostruct-align/1sjwA.t2k-thin90.a2m.gz # 1sjwA.t2k-thin90.a2m with 36 sequences, total weight= 36 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22418 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sjwA/info/1sjwA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sjwA/nostruct-align/1sjwA.t2k-thin90.a2m.gz, have 19174 columns in 85 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1llmC/nostruct-align/1llmC.t2k-thin90.a2m.gz # 1llmC.t2k-thin90.a2m with 6187 sequences, total weight= 238.434 avg weight= 0.0385378 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3238 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1llmC/info/1llmC.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1llmC/nostruct-align/1llmC.t2k-thin90.a2m.gz, have 19261 columns in 86 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1su8A/nostruct-align/1su8A.t2k-thin90.a2m.gz # 1su8A.t2k-thin90.a2m with 73 sequences, total weight= 34.6629 avg weight= 0.474835 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1su8A/info/1su8A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1su8A/nostruct-align/1su8A.t2k-thin90.a2m.gz, have 19894 columns in 87 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mba/nostruct-align/1mba.t2k-thin90.a2m.gz # 1mba.t2k-thin90.a2m with 293 sequences, total weight= 185.031 avg weight= 0.631507 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30236 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mba/info/1mba.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mba/nostruct-align/1mba.t2k-thin90.a2m.gz, have 20040 columns in 88 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pbjA/nostruct-align/1pbjA.t2k-thin90.a2m.gz # 1pbjA.t2k-thin90.a2m with 942 sequences, total weight= 942 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23103 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pbjA/info/1pbjA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pbjA/nostruct-align/1pbjA.t2k-thin90.a2m.gz, have 20160 columns in 89 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vm9A/nostruct-align/1vm9A.t2k-thin90.a2m.gz # 1vm9A.t2k-thin90.a2m with 454 sequences, total weight= 370.816 avg weight= 0.816775 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30221 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vm9A/info/1vm9A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vm9A/nostruct-align/1vm9A.t2k-thin90.a2m.gz, have 20269 columns in 90 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uscA/nostruct-align/1uscA.t2k-thin90.a2m.gz # 1uscA.t2k-thin90.a2m with 159 sequences, total weight= 159 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29483 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uscA/info/1uscA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uscA/nostruct-align/1uscA.t2k-thin90.a2m.gz, have 20447 columns in 91 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fg7A/nostruct-align/1fg7A.t2k-thin90.a2m.gz # 1fg7A.t2k-thin90.a2m with 557 sequences, total weight= 557 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06657 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fg7A/info/1fg7A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fg7A/nostruct-align/1fg7A.t2k-thin90.a2m.gz, have 20801 columns in 92 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j2rA/nostruct-align/1j2rA.t2k-thin90.a2m.gz # 1j2rA.t2k-thin90.a2m with 314 sequences, total weight= 314 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1989 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j2rA/info/1j2rA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j2rA/nostruct-align/1j2rA.t2k-thin90.a2m.gz, have 20989 columns in 93 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pbyA/nostruct-align/1pbyA.t2k-thin90.a2m.gz # 1pbyA.t2k-thin90.a2m with 4 sequences, total weight= 3.71609 avg weight= 0.929023 11 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pbyA/info/1pbyA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pbyA/nostruct-align/1pbyA.t2k-thin90.a2m.gz, have 21478 columns in 94 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mun/nostruct-align/1mun.t2k-thin90.a2m.gz # 1mun.t2k-thin90.a2m with 295 sequences, total weight= 103.681 avg weight= 0.351462 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30147 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mun/info/1mun.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mun/nostruct-align/1mun.t2k-thin90.a2m.gz, have 21703 columns in 95 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qopB/nostruct-align/1qopB.t2k-thin90.a2m.gz # 1qopB.t2k-thin90.a2m with 292 sequences, total weight= 153.228 avg weight= 0.524752 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3017 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qopB/info/1qopB.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qopB/nostruct-align/1qopB.t2k-thin90.a2m.gz, have 22093 columns in 96 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54B/nostruct-align/1v54B.t2k-thin90.a2m.gz # 1v54B.t2k-thin90.a2m with 1039 sequences, total weight= 63.9564 avg weight= 0.0615557 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30051 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54B/info/1v54B.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v54B/nostruct-align/1v54B.t2k-thin90.a2m.gz, have 22320 columns in 97 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kjwA/nostruct-align/1kjwA.t2k-thin90.a2m.gz # 1kjwA.t2k-thin90.a2m with 186 sequences, total weight= 186 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25183 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kjwA/info/1kjwA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kjwA/nostruct-align/1kjwA.t2k-thin90.a2m.gz, have 22612 columns in 98 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l3lA/nostruct-align/1l3lA.t2k-thin90.a2m.gz # 1l3lA.t2k-thin90.a2m with 316 sequences, total weight= 316 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08635 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l3lA/info/1l3lA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1l3lA/nostruct-align/1l3lA.t2k-thin90.a2m.gz, have 22845 columns in 99 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gwmA/nostruct-align/1gwmA.t2k-thin90.a2m.gz # 1gwmA.t2k-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.953949 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gwmA/info/1gwmA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gwmA/nostruct-align/1gwmA.t2k-thin90.a2m.gz, have 22998 columns in 100 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d0dA/nostruct-align/1d0dA.t2k-thin90.a2m.gz # 1d0dA.t2k-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20764 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d0dA/info/1d0dA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d0dA/nostruct-align/1d0dA.t2k-thin90.a2m.gz, have 23058 columns in 101 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vjvA/nostruct-align/1vjvA.t2k-thin90.a2m.gz # 1vjvA.t2k-thin90.a2m with 604 sequences, total weight= 604 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06465 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vjvA/info/1vjvA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vjvA/nostruct-align/1vjvA.t2k-thin90.a2m.gz, have 23425 columns in 102 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fvkA/nostruct-align/1fvkA.t2k-thin90.a2m.gz # 1fvkA.t2k-thin90.a2m with 95 sequences, total weight= 95 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17875 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fvkA/info/1fvkA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fvkA/nostruct-align/1fvkA.t2k-thin90.a2m.gz, have 23613 columns in 103 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pmi/nostruct-align/1pmi.t2k-thin90.a2m.gz # 1pmi.t2k-thin90.a2m with 72 sequences, total weight= 49.5917 avg weight= 0.688774 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pmi/info/1pmi.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pmi/nostruct-align/1pmi.t2k-thin90.a2m.gz, have 24053 columns in 104 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ibyA/nostruct-align/1ibyA.t2k-thin90.a2m.gz # 1ibyA.t2k-thin90.a2m with 93 sequences, total weight= 61.9503 avg weight= 0.666132 42 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ibyA/info/1ibyA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ibyA/nostruct-align/1ibyA.t2k-thin90.a2m.gz, have 24165 columns in 105 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o82A/nostruct-align/1o82A.t2k-thin90.a2m.gz # 1o82A.t2k-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.634682 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o82A/info/1o82A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o82A/nostruct-align/1o82A.t2k-thin90.a2m.gz, have 24235 columns in 106 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uaiA/nostruct-align/1uaiA.t2k-thin90.a2m.gz # 1uaiA.t2k-thin90.a2m with 27 sequences, total weight= 19.8971 avg weight= 0.736929 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uaiA/info/1uaiA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uaiA/nostruct-align/1uaiA.t2k-thin90.a2m.gz, have 24458 columns in 107 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1brt/nostruct-align/1brt.t2k-thin90.a2m.gz # 1brt.t2k-thin90.a2m with 681 sequences, total weight= 681 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.817764 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1brt/info/1brt.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1b/1brt/nostruct-align/1brt.t2k-thin90.a2m.gz, have 24735 columns in 108 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nrjB/nostruct-align/1nrjB.t2k-thin90.a2m.gz # 1nrjB.t2k-thin90.a2m with 431 sequences, total weight= 431 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0254 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nrjB/info/1nrjB.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nrjB/nostruct-align/1nrjB.t2k-thin90.a2m.gz, have 24926 columns in 109 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oqqA/nostruct-align/1oqqA.t2k-thin90.a2m.gz # 1oqqA.t2k-thin90.a2m with 227 sequences, total weight= 93.4123 avg weight= 0.411508 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30036 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oqqA/info/1oqqA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oqqA/nostruct-align/1oqqA.t2k-thin90.a2m.gz, have 25032 columns in 110 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jr8A/nostruct-align/1jr8A.t2k-thin90.a2m.gz # 1jr8A.t2k-thin90.a2m with 39 sequences, total weight= 30.4637 avg weight= 0.78112 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jr8A/info/1jr8A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jr8A/nostruct-align/1jr8A.t2k-thin90.a2m.gz, have 25137 columns in 111 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gvjA/nostruct-align/1gvjA.t2k-thin90.a2m.gz # 1gvjA.t2k-thin90.a2m with 92 sequences, total weight= 30.3828 avg weight= 0.330248 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gvjA/info/1gvjA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gvjA/nostruct-align/1gvjA.t2k-thin90.a2m.gz, have 25278 columns in 112 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d4tA/nostruct-align/1d4tA.t2k-thin90.a2m.gz # 1d4tA.t2k-thin90.a2m with 163 sequences, total weight= 67.2286 avg weight= 0.412446 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30064 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d4tA/info/1d4tA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d4tA/nostruct-align/1d4tA.t2k-thin90.a2m.gz, have 25382 columns in 113 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j1nA/nostruct-align/1j1nA.t2k-thin90.a2m.gz # 1j1nA.t2k-thin90.a2m with 84 sequences, total weight= 84 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.927292 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j1nA/info/1j1nA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j1nA/nostruct-align/1j1nA.t2k-thin90.a2m.gz, have 25874 columns in 114 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tfzA/nostruct-align/1tfzA.t2k-thin90.a2m.gz # 1tfzA.t2k-thin90.a2m with 128 sequences, total weight= 40.8223 avg weight= 0.318924 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tfzA/info/1tfzA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tfzA/nostruct-align/1tfzA.t2k-thin90.a2m.gz, have 26238 columns in 115 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eexA/nostruct-align/1eexA.t2k-thin90.a2m.gz # 1eexA.t2k-thin90.a2m with 7 sequences, total weight= 2.76372 avg weight= 0.394817 12 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eexA/info/1eexA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1eexA/nostruct-align/1eexA.t2k-thin90.a2m.gz, have 26789 columns in 116 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mg7A/nostruct-align/1mg7A.t2k-thin90.a2m.gz # 1mg7A.t2k-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.58081 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mg7A/info/1mg7A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mg7A/nostruct-align/1mg7A.t2k-thin90.a2m.gz, have 27140 columns in 117 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1us5A/nostruct-align/1us5A.t2k-thin90.a2m.gz # 1us5A.t2k-thin90.a2m with 268 sequences, total weight= 268 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01054 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1us5A/info/1us5A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1us5A/nostruct-align/1us5A.t2k-thin90.a2m.gz, have 27437 columns in 118 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1atg/nostruct-align/1atg.t2k-thin90.a2m.gz # 1atg.t2k-thin90.a2m with 114 sequences, total weight= 95.3834 avg weight= 0.836697 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1atg/info/1atg.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1a/1atg/nostruct-align/1atg.t2k-thin90.a2m.gz, have 27668 columns in 119 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f74A/nostruct-align/1f74A.t2k-thin90.a2m.gz # 1f74A.t2k-thin90.a2m with 309 sequences, total weight= 178.142 avg weight= 0.57651 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30276 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f74A/info/1f74A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f74A/nostruct-align/1f74A.t2k-thin90.a2m.gz, have 27961 columns in 120 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mtyG/nostruct-align/1mtyG.t2k-thin90.a2m.gz # 1mtyG.t2k-thin90.a2m with 5 sequences, total weight= 3.65052 avg weight= 0.730104 12 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mtyG/info/1mtyG.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mtyG/nostruct-align/1mtyG.t2k-thin90.a2m.gz, have 28123 columns in 121 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n62B/nostruct-align/1n62B.t2k-thin90.a2m.gz # 1n62B.t2k-thin90.a2m with 263 sequences, total weight= 263 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29807 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n62B/info/1n62B.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n62B/nostruct-align/1n62B.t2k-thin90.a2m.gz, have 28927 columns in 122 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1ntvA/nostruct-align/1ntvA.t2k-thin90.a2m.gz # 1ntvA.t2k-thin90.a2m with 28 sequences, total weight= 25.0537 avg weight= 0.894776 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1ntvA/info/1ntvA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1ntvA/nostruct-align/1ntvA.t2k-thin90.a2m.gz, have 29079 columns in 123 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gxyA/nostruct-align/1gxyA.t2k-thin90.a2m.gz # 1gxyA.t2k-thin90.a2m with 36 sequences, total weight= 10.5749 avg weight= 0.293748 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gxyA/info/1gxyA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gxyA/nostruct-align/1gxyA.t2k-thin90.a2m.gz, have 29302 columns in 124 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f2tA/nostruct-align/1f2tA.t2k-thin90.a2m.gz # 1f2tA.t2k-thin90.a2m with 1040 sequences, total weight= 1040 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0006 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f2tA/info/1f2tA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f2tA/nostruct-align/1f2tA.t2k-thin90.a2m.gz, have 29447 columns in 125 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hh8A/nostruct-align/1hh8A.t2k-thin90.a2m.gz # 1hh8A.t2k-thin90.a2m with 266 sequences, total weight= 266 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06393 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hh8A/info/1hh8A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hh8A/nostruct-align/1hh8A.t2k-thin90.a2m.gz, have 29639 columns in 126 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uylA/nostruct-align/1uylA.t2k-thin90.a2m.gz # 1uylA.t2k-thin90.a2m with 273 sequences, total weight= 27.0302 avg weight= 0.0990117 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uylA/info/1uylA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uylA/nostruct-align/1uylA.t2k-thin90.a2m.gz, have 29846 columns in 127 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s29A/nostruct-align/1s29A.t2k-thin90.a2m.gz # 1s29A.t2k-thin90.a2m with 73 sequences, total weight= 23.699 avg weight= 0.324644 41 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s29A/info/1s29A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s29A/nostruct-align/1s29A.t2k-thin90.a2m.gz, have 29938 columns in 128 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kyhA/nostruct-align/1kyhA.t2k-thin90.a2m.gz # 1kyhA.t2k-thin90.a2m with 178 sequences, total weight= 178 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28251 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kyhA/info/1kyhA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kyhA/nostruct-align/1kyhA.t2k-thin90.a2m.gz, have 30206 columns in 129 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nu0A/nostruct-align/1nu0A.t2k-thin90.a2m.gz # 1nu0A.t2k-thin90.a2m with 136 sequences, total weight= 32.5669 avg weight= 0.239462 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nu0A/info/1nu0A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nu0A/nostruct-align/1nu0A.t2k-thin90.a2m.gz, have 30337 columns in 130 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-thin90.a2m.gz # 1dciA.t2k-thin90.a2m with 385 sequences, total weight= 385 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23302 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-thin90.a2m.gz, have 30612 columns in 131 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k6kA/nostruct-align/1k6kA.t2k-thin90.a2m.gz # 1k6kA.t2k-thin90.a2m with 111 sequences, total weight= 92.5466 avg weight= 0.833753 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k6kA/info/1k6kA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k6kA/nostruct-align/1k6kA.t2k-thin90.a2m.gz, have 30754 columns in 132 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ezgA/nostruct-align/1ezgA.t2k-thin90.a2m.gz # 1ezgA.t2k-thin90.a2m with 12 sequences, total weight= 2.49355 avg weight= 0.207796 12 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ezgA/info/1ezgA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ezgA/nostruct-align/1ezgA.t2k-thin90.a2m.gz, have 30836 columns in 133 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1woqA/nostruct-align/1woqA.t2k-thin90.a2m.gz # 1woqA.t2k-thin90.a2m with 459 sequences, total weight= 459 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21778 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1woqA/info/1woqA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1w/1woqA/nostruct-align/1woqA.t2k-thin90.a2m.gz, have 31089 columns in 134 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n62C/nostruct-align/1n62C.t2k-thin90.a2m.gz # 1n62C.t2k-thin90.a2m with 161 sequences, total weight= 79.1877 avg weight= 0.491849 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30065 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n62C/info/1n62C.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n62C/nostruct-align/1n62C.t2k-thin90.a2m.gz, have 31375 columns in 135 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lv7A/nostruct-align/1lv7A.t2k-thin90.a2m.gz # 1lv7A.t2k-thin90.a2m with 1779 sequences, total weight= 1779 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09645 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lv7A/info/1lv7A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lv7A/nostruct-align/1lv7A.t2k-thin90.a2m.gz, have 31626 columns in 136 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t3iA/nostruct-align/1t3iA.t2k-thin90.a2m.gz # 1t3iA.t2k-thin90.a2m with 1418 sequences, total weight= 1418 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.975076 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t3iA/info/1t3iA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t3iA/nostruct-align/1t3iA.t2k-thin90.a2m.gz, have 32032 columns in 137 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s9uA/nostruct-align/1s9uA.t2k-thin90.a2m.gz # 1s9uA.t2k-thin90.a2m with 67 sequences, total weight= 67 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2491 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s9uA/info/1s9uA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s9uA/nostruct-align/1s9uA.t2k-thin90.a2m.gz, have 32233 columns in 138 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2p/2por/nostruct-align/2por.t2k-thin90.a2m.gz # 2por.t2k-thin90.a2m with 65 sequences, total weight= 65 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14684 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2p/2por/info/2por.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/2p/2por/nostruct-align/2por.t2k-thin90.a2m.gz, have 32534 columns in 139 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eluA/nostruct-align/1eluA.t2k-thin90.a2m.gz # 1eluA.t2k-thin90.a2m with 280 sequences, total weight= 280 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01627 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eluA/info/1eluA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1eluA/nostruct-align/1eluA.t2k-thin90.a2m.gz, have 32915 columns in 140 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tzvA/nostruct-align/1tzvA.t2k-thin90.a2m.gz # 1tzvA.t2k-thin90.a2m with 233 sequences, total weight= 144.664 avg weight= 0.620875 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30038 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tzvA/info/1tzvA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tzvA/nostruct-align/1tzvA.t2k-thin90.a2m.gz, have 33056 columns in 141 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j8bA/nostruct-align/1j8bA.t2k-thin90.a2m.gz # 1j8bA.t2k-thin90.a2m with 78 sequences, total weight= 18.6241 avg weight= 0.23877 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j8bA/info/1j8bA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j8bA/nostruct-align/1j8bA.t2k-thin90.a2m.gz, have 33148 columns in 142 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n2eA/nostruct-align/1n2eA.t2k-thin90.a2m.gz # 1n2eA.t2k-thin90.a2m with 78 sequences, total weight= 12.6621 avg weight= 0.162335 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n2eA/info/1n2eA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n2eA/nostruct-align/1n2eA.t2k-thin90.a2m.gz, have 33436 columns in 143 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nuyA/nostruct-align/1nuyA.t2k-thin90.a2m.gz # 1nuyA.t2k-thin90.a2m with 145 sequences, total weight= 50.0993 avg weight= 0.345512 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nuyA/info/1nuyA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nuyA/nostruct-align/1nuyA.t2k-thin90.a2m.gz, have 33764 columns in 144 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nscA/nostruct-align/1nscA.t2k-thin90.a2m.gz # 1nscA.t2k-thin90.a2m with 20 sequences, total weight= 4.36919 avg weight= 0.218459 19 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nscA/info/1nscA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nscA/nostruct-align/1nscA.t2k-thin90.a2m.gz, have 34154 columns in 145 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k0mA/nostruct-align/1k0mA.t2k-thin90.a2m.gz # 1k0mA.t2k-thin90.a2m with 171 sequences, total weight= 171 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14141 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k0mA/info/1k0mA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k0mA/nostruct-align/1k0mA.t2k-thin90.a2m.gz, have 34389 columns in 146 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hx0A/nostruct-align/1hx0A.t2k-thin90.a2m.gz # 1hx0A.t2k-thin90.a2m with 261 sequences, total weight= 261 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0911 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hx0A/info/1hx0A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hx0A/nostruct-align/1hx0A.t2k-thin90.a2m.gz, have 34885 columns in 147 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j2lA/nostruct-align/1j2lA.t2k-thin90.a2m.gz # 1j2lA.t2k-thin90.a2m with 162 sequences, total weight= 12.8903 avg weight= 0.0795699 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j2lA/info/1j2lA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j2lA/nostruct-align/1j2lA.t2k-thin90.a2m.gz, have 34953 columns in 148 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dfmA/nostruct-align/1dfmA.t2k-thin90.a2m.gz # 1dfmA.t2k-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0014 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dfmA/info/1dfmA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dfmA/nostruct-align/1dfmA.t2k-thin90.a2m.gz, have 35176 columns in 149 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ekgA/nostruct-align/1ekgA.t2k-thin90.a2m.gz # 1ekgA.t2k-thin90.a2m with 42 sequences, total weight= 17.2847 avg weight= 0.411541 31 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ekgA/info/1ekgA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ekgA/nostruct-align/1ekgA.t2k-thin90.a2m.gz, have 35295 columns in 150 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v33A/nostruct-align/1v33A.t2k-thin90.a2m.gz # 1v33A.t2k-thin90.a2m with 50 sequences, total weight= 50 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28297 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v33A/info/1v33A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v33A/nostruct-align/1v33A.t2k-thin90.a2m.gz, have 35641 columns in 151 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1es5A/nostruct-align/1es5A.t2k-thin90.a2m.gz # 1es5A.t2k-thin90.a2m with 105 sequences, total weight= 67.6334 avg weight= 0.644128 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1es5A/info/1es5A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1es5A/nostruct-align/1es5A.t2k-thin90.a2m.gz, have 35901 columns in 152 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b9mA/nostruct-align/1b9mA.t2k-thin90.a2m.gz # 1b9mA.t2k-thin90.a2m with 131 sequences, total weight= 76.9227 avg weight= 0.587196 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b9mA/info/1b9mA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1b/1b9mA/nostruct-align/1b9mA.t2k-thin90.a2m.gz, have 36159 columns in 153 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k55A/nostruct-align/1k55A.t2k-thin90.a2m.gz # 1k55A.t2k-thin90.a2m with 107 sequences, total weight= 76.2367 avg weight= 0.712493 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k55A/info/1k55A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k55A/nostruct-align/1k55A.t2k-thin90.a2m.gz, have 36404 columns in 154 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m7yA/nostruct-align/1m7yA.t2k-thin90.a2m.gz # 1m7yA.t2k-thin90.a2m with 963 sequences, total weight= 963 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04436 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m7yA/info/1m7yA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m7yA/nostruct-align/1m7yA.t2k-thin90.a2m.gz, have 36828 columns in 155 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uk8A/nostruct-align/1uk8A.t2k-thin90.a2m.gz # 1uk8A.t2k-thin90.a2m with 2008 sequences, total weight= 2008 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.861506 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uk8A/info/1uk8A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uk8A/nostruct-align/1uk8A.t2k-thin90.a2m.gz, have 37099 columns in 156 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hz6A/nostruct-align/1hz6A.t2k-thin90.a2m.gz # 1hz6A.t2k-thin90.a2m with 5 sequences, total weight= 2.79656 avg weight= 0.559313 9 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hz6A/info/1hz6A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hz6A/nostruct-align/1hz6A.t2k-thin90.a2m.gz, have 37166 columns in 157 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qauA/nostruct-align/1qauA.t2k-thin90.a2m.gz # 1qauA.t2k-thin90.a2m with 372 sequences, total weight= 372 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24273 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qauA/info/1qauA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qauA/nostruct-align/1qauA.t2k-thin90.a2m.gz, have 37278 columns in 158 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g8eA/nostruct-align/1g8eA.t2k-thin90.a2m.gz # 1g8eA.t2k-thin90.a2m with 14 sequences, total weight= 5.58222 avg weight= 0.39873 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g8eA/info/1g8eA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g8eA/nostruct-align/1g8eA.t2k-thin90.a2m.gz, have 37376 columns in 159 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1ne2A/nostruct-align/1ne2A.t2k-thin90.a2m.gz # 1ne2A.t2k-thin90.a2m with 627 sequences, total weight= 627 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.948668 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1ne2A/info/1ne2A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1ne2A/nostruct-align/1ne2A.t2k-thin90.a2m.gz, have 37552 columns in 160 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uv7A/nostruct-align/1uv7A.t2k-thin90.a2m.gz # 1uv7A.t2k-thin90.a2m with 18 sequences, total weight= 10.4636 avg weight= 0.581313 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uv7A/info/1uv7A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uv7A/nostruct-align/1uv7A.t2k-thin90.a2m.gz, have 37628 columns in 161 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e6cA/nostruct-align/1e6cA.t2k-thin90.a2m.gz # 1e6cA.t2k-thin90.a2m with 229 sequences, total weight= 229 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21128 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e6cA/info/1e6cA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e6cA/nostruct-align/1e6cA.t2k-thin90.a2m.gz, have 37798 columns in 162 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sluA/nostruct-align/1sluA.t2k-thin90.a2m.gz # 1sluA.t2k-thin90.a2m with 9 sequences, total weight= 4.41233 avg weight= 0.490259 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sluA/info/1sluA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sluA/nostruct-align/1sluA.t2k-thin90.a2m.gz, have 37929 columns in 163 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ooyA/nostruct-align/1ooyA.t2k-thin90.a2m.gz # 1ooyA.t2k-thin90.a2m with 251 sequences, total weight= 144.648 avg weight= 0.576287 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30038 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ooyA/info/1ooyA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ooyA/nostruct-align/1ooyA.t2k-thin90.a2m.gz, have 38392 columns in 164 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ojrA/nostruct-align/1ojrA.t2k-thin90.a2m.gz # 1ojrA.t2k-thin90.a2m with 53 sequences, total weight= 37.9759 avg weight= 0.716527 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ojrA/info/1ojrA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ojrA/nostruct-align/1ojrA.t2k-thin90.a2m.gz, have 38666 columns in 165 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bs0A/nostruct-align/1bs0A.t2k-thin90.a2m.gz # 1bs0A.t2k-thin90.a2m with 471 sequences, total weight= 471 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0836 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bs0A/info/1bs0A.stride-mixed.CB-burial-14-7 WARNING: skipping f, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1b/1bs0A/nostruct-align/1bs0A.t2k-thin90.a2m.gz, have 39048 columns in 166 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vh5A/nostruct-align/1vh5A.t2k-thin90.a2m.gz # 1vh5A.t2k-thin90.a2m with 148 sequences, total weight= 148 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23487 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vh5A/info/1vh5A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vh5A/nostruct-align/1vh5A.t2k-thin90.a2m.gz, have 39186 columns in 167 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sbxA/nostruct-align/1sbxA.t2k-thin90.a2m.gz # 1sbxA.t2k-thin90.a2m with 20 sequences, total weight= 7.29647 avg weight= 0.364824 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sbxA/info/1sbxA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sbxA/nostruct-align/1sbxA.t2k-thin90.a2m.gz, have 39292 columns in 168 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vljA/nostruct-align/1vljA.t2k-thin90.a2m.gz # 1vljA.t2k-thin90.a2m with 486 sequences, total weight= 486 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24461 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vljA/info/1vljA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vljA/nostruct-align/1vljA.t2k-thin90.a2m.gz, have 39690 columns in 169 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3s/3sil/nostruct-align/3sil.t2k-thin90.a2m.gz # 3sil.t2k-thin90.a2m with 79 sequences, total weight= 79 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14397 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3s/3sil/info/3sil.stride-mixed.CB-burial-14-7 WARNING: skipping b, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/3s/3sil/nostruct-align/3sil.t2k-thin90.a2m.gz, have 40068 columns in 170 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cv8/nostruct-align/1cv8.t2k-thin90.a2m.gz # 1cv8.t2k-thin90.a2m with 5 sequences, total weight= 2.73799 avg weight= 0.547599 10 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cv8/info/1cv8.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cv8/nostruct-align/1cv8.t2k-thin90.a2m.gz, have 40241 columns in 171 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h4pA/nostruct-align/1h4pA.t2k-thin90.a2m.gz # 1h4pA.t2k-thin90.a2m with 70 sequences, total weight= 70 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14687 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h4pA/info/1h4pA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h4pA/nostruct-align/1h4pA.t2k-thin90.a2m.gz, have 40649 columns in 172 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j3wA/nostruct-align/1j3wA.t2k-thin90.a2m.gz # 1j3wA.t2k-thin90.a2m with 28 sequences, total weight= 21.9809 avg weight= 0.785032 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j3wA/info/1j3wA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j3wA/nostruct-align/1j3wA.t2k-thin90.a2m.gz, have 40783 columns in 173 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hbnB/nostruct-align/1hbnB.t2k-thin90.a2m.gz # 1hbnB.t2k-thin90.a2m with 12 sequences, total weight= 3.13705 avg weight= 0.261421 15 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hbnB/info/1hbnB.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hbnB/nostruct-align/1hbnB.t2k-thin90.a2m.gz, have 41225 columns in 174 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dmhA/nostruct-align/1dmhA.t2k-thin90.a2m.gz # 1dmhA.t2k-thin90.a2m with 150 sequences, total weight= 55.8904 avg weight= 0.372603 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dmhA/info/1dmhA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dmhA/nostruct-align/1dmhA.t2k-thin90.a2m.gz, have 41534 columns in 175 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qy1A/nostruct-align/1qy1A.t2k-thin90.a2m.gz # 1qy1A.t2k-thin90.a2m with 125 sequences, total weight= 125 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13967 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qy1A/info/1qy1A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qy1A/nostruct-align/1qy1A.t2k-thin90.a2m.gz, have 41691 columns in 176 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xffA/nostruct-align/1xffA.t2k-thin90.a2m.gz # 1xffA.t2k-thin90.a2m with 681 sequences, total weight= 352.905 avg weight= 0.518216 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30993 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xffA/info/1xffA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xffA/nostruct-align/1xffA.t2k-thin90.a2m.gz, have 41929 columns in 177 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1el5A/nostruct-align/1el5A.t2k-thin90.a2m.gz # 1el5A.t2k-thin90.a2m with 715 sequences, total weight= 715 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.780232 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1el5A/info/1el5A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1el5A/nostruct-align/1el5A.t2k-thin90.a2m.gz, have 42314 columns in 178 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gv9A/nostruct-align/1gv9A.t2k-thin90.a2m.gz # 1gv9A.t2k-thin90.a2m with 59 sequences, total weight= 55.7061 avg weight= 0.944171 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gv9A/info/1gv9A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gv9A/nostruct-align/1gv9A.t2k-thin90.a2m.gz, have 42537 columns in 179 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1koe/nostruct-align/1koe.t2k-thin90.a2m.gz # 1koe.t2k-thin90.a2m with 11 sequences, total weight= 3.60381 avg weight= 0.32762 15 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1koe/info/1koe.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1koe/nostruct-align/1koe.t2k-thin90.a2m.gz, have 42709 columns in 180 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mfgA/nostruct-align/1mfgA.t2k-thin90.a2m.gz # 1mfgA.t2k-thin90.a2m with 552 sequences, total weight= 552 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22616 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mfgA/info/1mfgA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mfgA/nostruct-align/1mfgA.t2k-thin90.a2m.gz, have 42804 columns in 181 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pv5A/nostruct-align/1pv5A.t2k-thin90.a2m.gz # 1pv5A.t2k-thin90.a2m with 17 sequences, total weight= 17 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24456 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pv5A/info/1pv5A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pv5A/nostruct-align/1pv5A.t2k-thin90.a2m.gz, have 43065 columns in 182 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1svsA/nostruct-align/1svsA.t2k-thin90.a2m.gz # 1svsA.t2k-thin90.a2m with 439 sequences, total weight= 120.424 avg weight= 0.274315 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30236 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1svsA/info/1svsA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1svsA/nostruct-align/1svsA.t2k-thin90.a2m.gz, have 43381 columns in 183 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dfuP/nostruct-align/1dfuP.t2k-thin90.a2m.gz # 1dfuP.t2k-thin90.a2m with 88 sequences, total weight= 28.5962 avg weight= 0.324956 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dfuP/info/1dfuP.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dfuP/nostruct-align/1dfuP.t2k-thin90.a2m.gz, have 43475 columns in 184 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gnuA/nostruct-align/1gnuA.t2k-thin90.a2m.gz # 1gnuA.t2k-thin90.a2m with 50 sequences, total weight= 16.3263 avg weight= 0.326526 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gnuA/info/1gnuA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gnuA/nostruct-align/1gnuA.t2k-thin90.a2m.gz, have 43592 columns in 185 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tjyA/nostruct-align/1tjyA.t2k-thin90.a2m.gz # 1tjyA.t2k-thin90.a2m with 360 sequences, total weight= 360 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1264 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tjyA/info/1tjyA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tjyA/nostruct-align/1tjyA.t2k-thin90.a2m.gz, have 43908 columns in 186 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vj2A/nostruct-align/1vj2A.t2k-thin90.a2m.gz # 1vj2A.t2k-thin90.a2m with 285 sequences, total weight= 285 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.953633 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vj2A/info/1vj2A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vj2A/nostruct-align/1vj2A.t2k-thin90.a2m.gz, have 44022 columns in 187 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qwrA/nostruct-align/1qwrA.t2k-thin90.a2m.gz # 1qwrA.t2k-thin90.a2m with 98 sequences, total weight= 49.6419 avg weight= 0.50655 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qwrA/info/1qwrA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qwrA/nostruct-align/1qwrA.t2k-thin90.a2m.gz, have 44337 columns in 188 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1smoA/nostruct-align/1smoA.t2k-thin90.a2m.gz # 1smoA.t2k-thin90.a2m with 1506 sequences, total weight= 96.3919 avg weight= 0.0640052 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30536 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1smoA/info/1smoA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1smoA/nostruct-align/1smoA.t2k-thin90.a2m.gz, have 44450 columns in 189 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gcqC/nostruct-align/1gcqC.t2k-thin90.a2m.gz # 1gcqC.t2k-thin90.a2m with 234 sequences, total weight= 68.4858 avg weight= 0.292674 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gcqC/info/1gcqC.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gcqC/nostruct-align/1gcqC.t2k-thin90.a2m.gz, have 44519 columns in 190 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uwkA/nostruct-align/1uwkA.t2k-thin90.a2m.gz # 1uwkA.t2k-thin90.a2m with 61 sequences, total weight= 5.69356 avg weight= 0.0933371 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uwkA/info/1uwkA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uwkA/nostruct-align/1uwkA.t2k-thin90.a2m.gz, have 45073 columns in 191 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nr0A/nostruct-align/1nr0A.t2k-thin90.a2m.gz # 1nr0A.t2k-thin90.a2m with 2004 sequences, total weight= 2004 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.719045 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nr0A/info/1nr0A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nr0A/nostruct-align/1nr0A.t2k-thin90.a2m.gz, have 45683 columns in 192 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vyrA/nostruct-align/1vyrA.t2k-thin90.a2m.gz # 1vyrA.t2k-thin90.a2m with 449 sequences, total weight= 115.294 avg weight= 0.25678 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30352 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vyrA/info/1vyrA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vyrA/nostruct-align/1vyrA.t2k-thin90.a2m.gz, have 46046 columns in 193 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nlnA/nostruct-align/1nlnA.t2k-thin90.a2m.gz # 1nlnA.t2k-thin90.a2m with 25 sequences, total weight= 4.81714 avg weight= 0.192685 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nlnA/info/1nlnA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nlnA/nostruct-align/1nlnA.t2k-thin90.a2m.gz, have 46249 columns in 194 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oi7A/nostruct-align/1oi7A.t2k-thin90.a2m.gz # 1oi7A.t2k-thin90.a2m with 210 sequences, total weight= 53.0189 avg weight= 0.252471 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oi7A/info/1oi7A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oi7A/nostruct-align/1oi7A.t2k-thin90.a2m.gz, have 46519 columns in 195 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hdhA/nostruct-align/1hdhA.t2k-thin90.a2m.gz # 1hdhA.t2k-thin90.a2m with 361 sequences, total weight= 361 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0361 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hdhA/info/1hdhA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hdhA/nostruct-align/1hdhA.t2k-thin90.a2m.gz, have 47044 columns in 196 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l7lA/nostruct-align/1l7lA.t2k-thin90.a2m.gz # 1l7lA.t2k-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.98355 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l7lA/info/1l7lA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1l7lA/nostruct-align/1l7lA.t2k-thin90.a2m.gz, have 47165 columns in 197 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v77A/nostruct-align/1v77A.t2k-thin90.a2m.gz # 1v77A.t2k-thin90.a2m with 21 sequences, total weight= 21 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29844 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v77A/info/1v77A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v77A/nostruct-align/1v77A.t2k-thin90.a2m.gz, have 47367 columns in 198 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sdsA/nostruct-align/1sdsA.t2k-thin90.a2m.gz # 1sdsA.t2k-thin90.a2m with 250 sequences, total weight= 95.0103 avg weight= 0.380041 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sdsA/info/1sdsA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sdsA/nostruct-align/1sdsA.t2k-thin90.a2m.gz, have 47482 columns in 199 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kolA/nostruct-align/1kolA.t2k-thin90.a2m.gz # 1kolA.t2k-thin90.a2m with 1015 sequences, total weight= 1015 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18282 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kolA/info/1kolA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kolA/nostruct-align/1kolA.t2k-thin90.a2m.gz, have 47878 columns in 200 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r9dA/nostruct-align/1r9dA.t2k-thin90.a2m.gz # 1r9dA.t2k-thin90.a2m with 68 sequences, total weight= 27.2636 avg weight= 0.400936 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r9dA/info/1r9dA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r9dA/nostruct-align/1r9dA.t2k-thin90.a2m.gz, have 48664 columns in 201 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dusA/nostruct-align/1dusA.t2k-thin90.a2m.gz # 1dusA.t2k-thin90.a2m with 659 sequences, total weight= 659 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.850707 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dusA/info/1dusA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dusA/nostruct-align/1dusA.t2k-thin90.a2m.gz, have 48858 columns in 202 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1viaA/nostruct-align/1viaA.t2k-thin90.a2m.gz # 1viaA.t2k-thin90.a2m with 506 sequences, total weight= 506 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.946897 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1viaA/info/1viaA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1viaA/nostruct-align/1viaA.t2k-thin90.a2m.gz, have 49019 columns in 203 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l9lA/nostruct-align/1l9lA.t2k-thin90.a2m.gz # 1l9lA.t2k-thin90.a2m with 73 sequences, total weight= 65.7085 avg weight= 0.900116 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l9lA/info/1l9lA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1l9lA/nostruct-align/1l9lA.t2k-thin90.a2m.gz, have 49093 columns in 204 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c3pA/nostruct-align/1c3pA.t2k-thin90.a2m.gz # 1c3pA.t2k-thin90.a2m with 239 sequences, total weight= 135.632 avg weight= 0.567497 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30054 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c3pA/info/1c3pA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1c/1c3pA/nostruct-align/1c3pA.t2k-thin90.a2m.gz, have 49465 columns in 205 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vlpA/nostruct-align/1vlpA.t2k-thin90.a2m.gz # 1vlpA.t2k-thin90.a2m with 127 sequences, total weight= 31.4914 avg weight= 0.247964 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vlpA/info/1vlpA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vlpA/nostruct-align/1vlpA.t2k-thin90.a2m.gz, have 49883 columns in 206 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hfeS/nostruct-align/1hfeS.t2k-thin90.a2m.gz # 1hfeS.t2k-thin90.a2m with 35 sequences, total weight= 14.0114 avg weight= 0.400326 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hfeS/info/1hfeS.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hfeS/nostruct-align/1hfeS.t2k-thin90.a2m.gz, have 49971 columns in 207 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h03P/nostruct-align/1h03P.t2k-thin90.a2m.gz # 1h03P.t2k-thin90.a2m with 623 sequences, total weight= 623 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10605 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h03P/info/1h03P.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h03P/nostruct-align/1h03P.t2k-thin90.a2m.gz, have 50096 columns in 208 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vjpA/nostruct-align/1vjpA.t2k-thin90.a2m.gz # 1vjpA.t2k-thin90.a2m with 77 sequences, total weight= 25.7395 avg weight= 0.33428 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vjpA/info/1vjpA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vjpA/nostruct-align/1vjpA.t2k-thin90.a2m.gz, have 50478 columns in 209 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w4xA/nostruct-align/1w4xA.t2k-thin90.a2m.gz # 1w4xA.t2k-thin90.a2m with 1145 sequences, total weight= 1145 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.862608 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w4xA/info/1w4xA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w4xA/nostruct-align/1w4xA.t2k-thin90.a2m.gz, have 51011 columns in 210 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o66A/nostruct-align/1o66A.t2k-thin90.a2m.gz # 1o66A.t2k-thin90.a2m with 110 sequences, total weight= 10.4119 avg weight= 0.0946536 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o66A/info/1o66A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o66A/nostruct-align/1o66A.t2k-thin90.a2m.gz, have 51260 columns in 211 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h6lA/nostruct-align/1h6lA.t2k-thin90.a2m.gz # 1h6lA.t2k-thin90.a2m with 18 sequences, total weight= 13.7876 avg weight= 0.765976 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h6lA/info/1h6lA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h6lA/nostruct-align/1h6lA.t2k-thin90.a2m.gz, have 51613 columns in 212 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vicA/nostruct-align/1vicA.t2k-thin90.a2m.gz # 1vicA.t2k-thin90.a2m with 368 sequences, total weight= 368 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05863 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vicA/info/1vicA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vicA/nostruct-align/1vicA.t2k-thin90.a2m.gz, have 51868 columns in 213 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bbkL/nostruct-align/2bbkL.t2k-thin90.a2m.gz # 2bbkL.t2k-thin90.a2m with 6 sequences, total weight= 2.42427 avg weight= 0.404045 12 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bbkL/info/2bbkL.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/2b/2bbkL/nostruct-align/2bbkL.t2k-thin90.a2m.gz, have 51993 columns in 214 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3c/3chbD/nostruct-align/3chbD.t2k-thin90.a2m.gz # 3chbD.t2k-thin90.a2m with 4 sequences, total weight= 2.2449 avg weight= 0.561224 10 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3c/3chbD/info/3chbD.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/3c/3chbD/nostruct-align/3chbD.t2k-thin90.a2m.gz, have 52096 columns in 215 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1my7A/nostruct-align/1my7A.t2k-thin90.a2m.gz # 1my7A.t2k-thin90.a2m with 31 sequences, total weight= 12.2336 avg weight= 0.394633 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1my7A/info/1my7A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1my7A/nostruct-align/1my7A.t2k-thin90.a2m.gz, have 52203 columns in 216 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nbcA/nostruct-align/1nbcA.t2k-thin90.a2m.gz # 1nbcA.t2k-thin90.a2m with 56 sequences, total weight= 34.1981 avg weight= 0.610681 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nbcA/info/1nbcA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nbcA/nostruct-align/1nbcA.t2k-thin90.a2m.gz, have 52358 columns in 217 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t6t1/nostruct-align/1t6t1.t2k-thin90.a2m.gz # 1t6t1.t2k-thin90.a2m with 70 sequences, total weight= 45.3542 avg weight= 0.647917 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t6t1/info/1t6t1.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t6t1/nostruct-align/1t6t1.t2k-thin90.a2m.gz, have 52466 columns in 218 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ek6A/nostruct-align/1ek6A.t2k-thin90.a2m.gz # 1ek6A.t2k-thin90.a2m with 688 sequences, total weight= 688 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.995574 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ek6A/info/1ek6A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ek6A/nostruct-align/1ek6A.t2k-thin90.a2m.gz, have 52812 columns in 219 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gz8A/nostruct-align/1gz8A.t2k-thin90.a2m.gz # 1gz8A.t2k-thin90.a2m with 5289 sequences, total weight= 5289 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09443 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gz8A/info/1gz8A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gz8A/nostruct-align/1gz8A.t2k-thin90.a2m.gz, have 53103 columns in 220 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fjhA/nostruct-align/1fjhA.t2k-thin90.a2m.gz # 1fjhA.t2k-thin90.a2m with 1233 sequences, total weight= 202.485 avg weight= 0.164221 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31219 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fjhA/info/1fjhA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fjhA/nostruct-align/1fjhA.t2k-thin90.a2m.gz, have 53339 columns in 221 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cb0A/nostruct-align/1cb0A.t2k-thin90.a2m.gz # 1cb0A.t2k-thin90.a2m with 133 sequences, total weight= 41.2608 avg weight= 0.310231 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cb0A/info/1cb0A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cb0A/nostruct-align/1cb0A.t2k-thin90.a2m.gz, have 53607 columns in 222 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1obfO/nostruct-align/1obfO.t2k-thin90.a2m.gz # 1obfO.t2k-thin90.a2m with 1072 sequences, total weight= 46.0578 avg weight= 0.0429643 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1obfO/info/1obfO.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1obfO/nostruct-align/1obfO.t2k-thin90.a2m.gz, have 53942 columns in 223 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1evlA/nostruct-align/1evlA.t2k-thin90.a2m.gz # 1evlA.t2k-thin90.a2m with 238 sequences, total weight= 238 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23552 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1evlA/info/1evlA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1evlA/nostruct-align/1evlA.t2k-thin90.a2m.gz, have 54343 columns in 224 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hyoA/nostruct-align/1hyoA.t2k-thin90.a2m.gz # 1hyoA.t2k-thin90.a2m with 177 sequences, total weight= 60.9016 avg weight= 0.344077 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hyoA/info/1hyoA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hyoA/nostruct-align/1hyoA.t2k-thin90.a2m.gz, have 54759 columns in 225 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nytA/nostruct-align/1nytA.t2k-thin90.a2m.gz # 1nytA.t2k-thin90.a2m with 229 sequences, total weight= 154.036 avg weight= 0.672644 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30135 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nytA/info/1nytA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nytA/nostruct-align/1nytA.t2k-thin90.a2m.gz, have 55030 columns in 226 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pu6A/nostruct-align/1pu6A.t2k-thin90.a2m.gz # 1pu6A.t2k-thin90.a2m with 190 sequences, total weight= 184.112 avg weight= 0.969009 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pu6A/info/1pu6A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pu6A/nostruct-align/1pu6A.t2k-thin90.a2m.gz, have 55247 columns in 227 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qw9A/nostruct-align/1qw9A.t2k-thin90.a2m.gz # 1qw9A.t2k-thin90.a2m with 52 sequences, total weight= 27.6226 avg weight= 0.531204 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qw9A/info/1qw9A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qw9A/nostruct-align/1qw9A.t2k-thin90.a2m.gz, have 55744 columns in 228 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kqpA/nostruct-align/1kqpA.t2k-thin90.a2m.gz # 1kqpA.t2k-thin90.a2m with 190 sequences, total weight= 97.4391 avg weight= 0.512837 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30086 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kqpA/info/1kqpA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kqpA/nostruct-align/1kqpA.t2k-thin90.a2m.gz, have 56015 columns in 229 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mb3A/nostruct-align/1mb3A.t2k-thin90.a2m.gz # 1mb3A.t2k-thin90.a2m with 3805 sequences, total weight= 3116.24 avg weight= 0.818986 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30622 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mb3A/info/1mb3A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mb3A/nostruct-align/1mb3A.t2k-thin90.a2m.gz, have 56132 columns in 230 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oalA/nostruct-align/1oalA.t2k-thin90.a2m.gz # 1oalA.t2k-thin90.a2m with 197 sequences, total weight= 25.0831 avg weight= 0.127326 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oalA/info/1oalA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oalA/nostruct-align/1oalA.t2k-thin90.a2m.gz, have 56283 columns in 231 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mixA/nostruct-align/1mixA.t2k-thin90.a2m.gz # 1mixA.t2k-thin90.a2m with 111 sequences, total weight= 111 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2039 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mixA/info/1mixA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mixA/nostruct-align/1mixA.t2k-thin90.a2m.gz, have 56489 columns in 232 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p1jA/nostruct-align/1p1jA.t2k-thin90.a2m.gz # 1p1jA.t2k-thin90.a2m with 54 sequences, total weight= 27.1622 avg weight= 0.503004 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p1jA/info/1p1jA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p1jA/nostruct-align/1p1jA.t2k-thin90.a2m.gz, have 57014 columns in 233 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oh0A/nostruct-align/1oh0A.t2k-thin90.a2m.gz # 1oh0A.t2k-thin90.a2m with 58 sequences, total weight= 58 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03884 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oh0A/info/1oh0A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oh0A/nostruct-align/1oh0A.t2k-thin90.a2m.gz, have 57139 columns in 234 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1byi/nostruct-align/1byi.t2k-thin90.a2m.gz # 1byi.t2k-thin90.a2m with 188 sequences, total weight= 178.331 avg weight= 0.948568 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1byi/info/1byi.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1b/1byi/nostruct-align/1byi.t2k-thin90.a2m.gz, have 57363 columns in 235 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/4u/4ubpB/nostruct-align/4ubpB.t2k-thin90.a2m.gz # 4ubpB.t2k-thin90.a2m with 86 sequences, total weight= 6.82481 avg weight= 0.0793582 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/4u/4ubpB/info/4ubpB.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/4u/4ubpB/nostruct-align/4ubpB.t2k-thin90.a2m.gz, have 57485 columns in 236 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fnlA/nostruct-align/1fnlA.t2k-thin90.a2m.gz # 1fnlA.t2k-thin90.a2m with 472 sequences, total weight= 472 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.974758 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fnlA/info/1fnlA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fnlA/nostruct-align/1fnlA.t2k-thin90.a2m.gz, have 57658 columns in 237 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t0tV/nostruct-align/1t0tV.t2k-thin90.a2m.gz # 1t0tV.t2k-thin90.a2m with 32 sequences, total weight= 21.119 avg weight= 0.65997 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t0tV/info/1t0tV.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t0tV/nostruct-align/1t0tV.t2k-thin90.a2m.gz, have 57901 columns in 238 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e6uA/nostruct-align/1e6uA.t2k-thin90.a2m.gz # 1e6uA.t2k-thin90.a2m with 445 sequences, total weight= 445 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19376 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e6uA/info/1e6uA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e6uA/nostruct-align/1e6uA.t2k-thin90.a2m.gz, have 58216 columns in 239 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q5yA/nostruct-align/1q5yA.t2k-thin90.a2m.gz # 1q5yA.t2k-thin90.a2m with 34 sequences, total weight= 13.4784 avg weight= 0.396425 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q5yA/info/1q5yA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q5yA/nostruct-align/1q5yA.t2k-thin90.a2m.gz, have 58300 columns in 240 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fk5A/nostruct-align/1fk5A.t2k-thin90.a2m.gz # 1fk5A.t2k-thin90.a2m with 176 sequences, total weight= 40.8315 avg weight= 0.231997 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fk5A/info/1fk5A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fk5A/nostruct-align/1fk5A.t2k-thin90.a2m.gz, have 58393 columns in 241 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r0rI/nostruct-align/1r0rI.t2k-thin90.a2m.gz # 1r0rI.t2k-thin90.a2m with 181 sequences, total weight= 50.6267 avg weight= 0.279705 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r0rI/info/1r0rI.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r0rI/nostruct-align/1r0rI.t2k-thin90.a2m.gz, have 58444 columns in 242 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k4iA/nostruct-align/1k4iA.t2k-thin90.a2m.gz # 1k4iA.t2k-thin90.a2m with 145 sequences, total weight= 13.2677 avg weight= 0.0915011 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k4iA/info/1k4iA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k4iA/nostruct-align/1k4iA.t2k-thin90.a2m.gz, have 58660 columns in 243 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lopA/nostruct-align/1lopA.t2k-thin90.a2m.gz # 1lopA.t2k-thin90.a2m with 209 sequences, total weight= 34.4415 avg weight= 0.164792 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lopA/info/1lopA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lopA/nostruct-align/1lopA.t2k-thin90.a2m.gz, have 58824 columns in 244 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e7wA/nostruct-align/1e7wA.t2k-thin90.a2m.gz # 1e7wA.t2k-thin90.a2m with 1199 sequences, total weight= 370.146 avg weight= 0.308712 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31013 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e7wA/info/1e7wA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e7wA/nostruct-align/1e7wA.t2k-thin90.a2m.gz, have 59091 columns in 245 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t61A/nostruct-align/1t61A.t2k-thin90.a2m.gz # 1t61A.t2k-thin90.a2m with 45 sequences, total weight= 4.02931 avg weight= 0.0895401 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t61A/info/1t61A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t61A/nostruct-align/1t61A.t2k-thin90.a2m.gz, have 59314 columns in 246 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a8d/nostruct-align/1a8d.t2k-thin90.a2m.gz # 1a8d.t2k-thin90.a2m with 26 sequences, total weight= 19.4746 avg weight= 0.749023 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a8d/info/1a8d.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1a/1a8d/nostruct-align/1a8d.t2k-thin90.a2m.gz, have 59766 columns in 247 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nthA/nostruct-align/1nthA.t2k-thin90.a2m.gz # 1nthA.t2k-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.609947 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nthA/info/1nthA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nthA/nostruct-align/1nthA.t2k-thin90.a2m.gz, have 60223 columns in 248 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kgdA/nostruct-align/1kgdA.t2k-thin90.a2m.gz # 1kgdA.t2k-thin90.a2m with 190 sequences, total weight= 51.7691 avg weight= 0.272469 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kgdA/info/1kgdA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kgdA/nostruct-align/1kgdA.t2k-thin90.a2m.gz, have 60398 columns in 249 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n0qA/nostruct-align/1n0qA.t2k-thin90.a2m.gz # 1n0qA.t2k-thin90.a2m with 1981 sequences, total weight= 1981 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28487 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n0qA/info/1n0qA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n0qA/nostruct-align/1n0qA.t2k-thin90.a2m.gz, have 60489 columns in 250 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1px5A/nostruct-align/1px5A.t2k-thin90.a2m.gz # 1px5A.t2k-thin90.a2m with 35 sequences, total weight= 10.8486 avg weight= 0.309961 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1px5A/info/1px5A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1px5A/nostruct-align/1px5A.t2k-thin90.a2m.gz, have 60818 columns in 251 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jzgA/nostruct-align/1jzgA.t2k-thin90.a2m.gz # 1jzgA.t2k-thin90.a2m with 28 sequences, total weight= 5.82209 avg weight= 0.207932 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jzgA/info/1jzgA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jzgA/nostruct-align/1jzgA.t2k-thin90.a2m.gz, have 60946 columns in 252 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i1jA/nostruct-align/1i1jA.t2k-thin90.a2m.gz # 1i1jA.t2k-thin90.a2m with 72 sequences, total weight= 66.03 avg weight= 0.917083 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i1jA/info/1i1jA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i1jA/nostruct-align/1i1jA.t2k-thin90.a2m.gz, have 61052 columns in 253 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h0hB/nostruct-align/1h0hB.t2k-thin90.a2m.gz # 1h0hB.t2k-thin90.a2m with 293 sequences, total weight= 293 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22819 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h0hB/info/1h0hB.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h0hB/nostruct-align/1h0hB.t2k-thin90.a2m.gz, have 61266 columns in 254 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jm1A/nostruct-align/1jm1A.t2k-thin90.a2m.gz # 1jm1A.t2k-thin90.a2m with 225 sequences, total weight= 127.645 avg weight= 0.56731 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jm1A/info/1jm1A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jm1A/nostruct-align/1jm1A.t2k-thin90.a2m.gz, have 61468 columns in 255 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fna/nostruct-align/1fna.t2k-thin90.a2m.gz # 1fna.t2k-thin90.a2m with 917 sequences, total weight= 917 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1025 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fna/info/1fna.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fna/nostruct-align/1fna.t2k-thin90.a2m.gz, have 61559 columns in 256 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lniA/nostruct-align/1lniA.t2k-thin90.a2m.gz # 1lniA.t2k-thin90.a2m with 18 sequences, total weight= 5.48722 avg weight= 0.304846 20 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lniA/info/1lniA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lniA/nostruct-align/1lniA.t2k-thin90.a2m.gz, have 61655 columns in 257 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b9wA/nostruct-align/1b9wA.t2k-thin90.a2m.gz # 1b9wA.t2k-thin90.a2m with 223 sequences, total weight= 107.909 avg weight= 0.483899 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30087 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b9wA/info/1b9wA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1b/1b9wA/nostruct-align/1b9wA.t2k-thin90.a2m.gz, have 61744 columns in 258 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eu3A/nostruct-align/1eu3A.t2k-thin90.a2m.gz # 1eu3A.t2k-thin90.a2m with 56 sequences, total weight= 51.5499 avg weight= 0.920535 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eu3A/info/1eu3A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1eu3A/nostruct-align/1eu3A.t2k-thin90.a2m.gz, have 61954 columns in 259 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k7cA/nostruct-align/1k7cA.t2k-thin90.a2m.gz # 1k7cA.t2k-thin90.a2m with 35 sequences, total weight= 24.526 avg weight= 0.700741 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k7cA/info/1k7cA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k7cA/nostruct-align/1k7cA.t2k-thin90.a2m.gz, have 62187 columns in 260 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t8kA/nostruct-align/1t8kA.t2k-thin90.a2m.gz # 1t8kA.t2k-thin90.a2m with 500 sequences, total weight= 134.058 avg weight= 0.268116 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30287 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t8kA/info/1t8kA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t8kA/nostruct-align/1t8kA.t2k-thin90.a2m.gz, have 62264 columns in 261 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1ml4A/nostruct-align/1ml4A.t2k-thin90.a2m.gz # 1ml4A.t2k-thin90.a2m with 277 sequences, total weight= 36.685 avg weight= 0.132437 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1ml4A/info/1ml4A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1ml4A/nostruct-align/1ml4A.t2k-thin90.a2m.gz, have 62571 columns in 262 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m1fA/nostruct-align/1m1fA.t2k-thin90.a2m.gz # 1m1fA.t2k-thin90.a2m with 70 sequences, total weight= 37.3343 avg weight= 0.533348 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m1fA/info/1m1fA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m1fA/nostruct-align/1m1fA.t2k-thin90.a2m.gz, have 62678 columns in 263 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n40A/nostruct-align/1n40A.t2k-thin90.a2m.gz # 1n40A.t2k-thin90.a2m with 886 sequences, total weight= 886 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08495 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n40A/info/1n40A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n40A/nostruct-align/1n40A.t2k-thin90.a2m.gz, have 63072 columns in 264 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qhoA/nostruct-align/1qhoA.t2k-thin90.a2m.gz # 1qhoA.t2k-thin90.a2m with 368 sequences, total weight= 368 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11885 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qhoA/info/1qhoA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qhoA/nostruct-align/1qhoA.t2k-thin90.a2m.gz, have 63758 columns in 265 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o7qA/nostruct-align/1o7qA.t2k-thin90.a2m.gz # 1o7qA.t2k-thin90.a2m with 24 sequences, total weight= 8.05 avg weight= 0.335417 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o7qA/info/1o7qA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o7qA/nostruct-align/1o7qA.t2k-thin90.a2m.gz, have 64045 columns in 266 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p3cA/nostruct-align/1p3cA.t2k-thin90.a2m.gz # 1p3cA.t2k-thin90.a2m with 618 sequences, total weight= 618 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15769 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p3cA/info/1p3cA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p3cA/nostruct-align/1p3cA.t2k-thin90.a2m.gz, have 64260 columns in 267 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yacA/nostruct-align/1yacA.t2k-thin90.a2m.gz # 1yacA.t2k-thin90.a2m with 274 sequences, total weight= 274 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29941 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yacA/info/1yacA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1y/1yacA/nostruct-align/1yacA.t2k-thin90.a2m.gz, have 64464 columns in 268 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mgqA/nostruct-align/1mgqA.t2k-thin90.a2m.gz # 1mgqA.t2k-thin90.a2m with 201 sequences, total weight= 71.009 avg weight= 0.353279 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mgqA/info/1mgqA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mgqA/nostruct-align/1mgqA.t2k-thin90.a2m.gz, have 64538 columns in 269 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e58A/nostruct-align/1e58A.t2k-thin90.a2m.gz # 1e58A.t2k-thin90.a2m with 185 sequences, total weight= 185 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19596 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e58A/info/1e58A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e58A/nostruct-align/1e58A.t2k-thin90.a2m.gz, have 64785 columns in 270 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kq3A/nostruct-align/1kq3A.t2k-thin90.a2m.gz # 1kq3A.t2k-thin90.a2m with 219 sequences, total weight= 219 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17876 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kq3A/info/1kq3A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kq3A/nostruct-align/1kq3A.t2k-thin90.a2m.gz, have 65149 columns in 271 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w3iA/nostruct-align/1w3iA.t2k-thin90.a2m.gz # 1w3iA.t2k-thin90.a2m with 432 sequences, total weight= 181.4 avg weight= 0.419907 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30218 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w3iA/info/1w3iA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w3iA/nostruct-align/1w3iA.t2k-thin90.a2m.gz, have 65442 columns in 272 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uxzA/nostruct-align/1uxzA.t2k-thin90.a2m.gz # 1uxzA.t2k-thin90.a2m with 153 sequences, total weight= 110.846 avg weight= 0.724484 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uxzA/info/1uxzA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uxzA/nostruct-align/1uxzA.t2k-thin90.a2m.gz, have 65573 columns in 273 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kugA/nostruct-align/1kugA.t2k-thin90.a2m.gz # 1kugA.t2k-thin90.a2m with 192 sequences, total weight= 177.354 avg weight= 0.923718 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30044 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kugA/info/1kugA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kugA/nostruct-align/1kugA.t2k-thin90.a2m.gz, have 65774 columns in 274 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vfyA/nostruct-align/1vfyA.t2k-thin90.a2m.gz # 1vfyA.t2k-thin90.a2m with 140 sequences, total weight= 34.3538 avg weight= 0.245385 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vfyA/info/1vfyA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vfyA/nostruct-align/1vfyA.t2k-thin90.a2m.gz, have 65841 columns in 275 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r12A/nostruct-align/1r12A.t2k-thin90.a2m.gz # 1r12A.t2k-thin90.a2m with 10 sequences, total weight= 6.27209 avg weight= 0.627209 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r12A/info/1r12A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r12A/nostruct-align/1r12A.t2k-thin90.a2m.gz, have 66092 columns in 276 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h72C/nostruct-align/1h72C.t2k-thin90.a2m.gz # 1h72C.t2k-thin90.a2m with 310 sequences, total weight= 310 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03237 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h72C/info/1h72C.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h72C/nostruct-align/1h72C.t2k-thin90.a2m.gz, have 66388 columns in 277 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1olrA/nostruct-align/1olrA.t2k-thin90.a2m.gz # 1olrA.t2k-thin90.a2m with 44 sequences, total weight= 19.9691 avg weight= 0.453844 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1olrA/info/1olrA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1olrA/nostruct-align/1olrA.t2k-thin90.a2m.gz, have 66612 columns in 278 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nycA/nostruct-align/1nycA.t2k-thin90.a2m.gz # 1nycA.t2k-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0408 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nycA/info/1nycA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nycA/nostruct-align/1nycA.t2k-thin90.a2m.gz, have 66723 columns in 279 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dqgA/nostruct-align/1dqgA.t2k-thin90.a2m.gz # 1dqgA.t2k-thin90.a2m with 23 sequences, total weight= 17.39 avg weight= 0.756085 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dqgA/info/1dqgA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dqgA/nostruct-align/1dqgA.t2k-thin90.a2m.gz, have 66857 columns in 280 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gs5A/nostruct-align/1gs5A.t2k-thin90.a2m.gz # 1gs5A.t2k-thin90.a2m with 354 sequences, total weight= 354 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2345 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gs5A/info/1gs5A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gs5A/nostruct-align/1gs5A.t2k-thin90.a2m.gz, have 67115 columns in 281 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lfwA/nostruct-align/1lfwA.t2k-thin90.a2m.gz # 1lfwA.t2k-thin90.a2m with 289 sequences, total weight= 289 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04524 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lfwA/info/1lfwA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lfwA/nostruct-align/1lfwA.t2k-thin90.a2m.gz, have 67583 columns in 282 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lwbA/nostruct-align/1lwbA.t2k-thin90.a2m.gz # 1lwbA.t2k-thin90.a2m with 8 sequences, total weight= 6.67078 avg weight= 0.833848 14 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lwbA/info/1lwbA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lwbA/nostruct-align/1lwbA.t2k-thin90.a2m.gz, have 67705 columns in 283 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k-thin90.a2m.gz # 7odcA.t2k-thin90.a2m with 307 sequences, total weight= 307 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28787 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/7o/7odcA/info/7odcA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k-thin90.a2m.gz, have 68092 columns in 284 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nls/nostruct-align/1nls.t2k-thin90.a2m.gz # 1nls.t2k-thin90.a2m with 277 sequences, total weight= 56.6791 avg weight= 0.204618 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nls/info/1nls.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nls/nostruct-align/1nls.t2k-thin90.a2m.gz, have 68329 columns in 285 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pq7A/nostruct-align/1pq7A.t2k-thin90.a2m.gz # 1pq7A.t2k-thin90.a2m with 1542 sequences, total weight= 588.242 avg weight= 0.38148 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31929 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pq7A/info/1pq7A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pq7A/nostruct-align/1pq7A.t2k-thin90.a2m.gz, have 68553 columns in 286 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d8wA/nostruct-align/1d8wA.t2k-thin90.a2m.gz # 1d8wA.t2k-thin90.a2m with 17 sequences, total weight= 6.22134 avg weight= 0.365961 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d8wA/info/1d8wA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d8wA/nostruct-align/1d8wA.t2k-thin90.a2m.gz, have 68955 columns in 287 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mtzA/nostruct-align/1mtzA.t2k-thin90.a2m.gz # 1mtzA.t2k-thin90.a2m with 1070 sequences, total weight= 1070 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.787676 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mtzA/info/1mtzA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mtzA/nostruct-align/1mtzA.t2k-thin90.a2m.gz, have 69245 columns in 288 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lam/nostruct-align/1lam.t2k-thin90.a2m.gz # 1lam.t2k-thin90.a2m with 175 sequences, total weight= 45.5387 avg weight= 0.260221 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30034 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lam/info/1lam.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lam/nostruct-align/1lam.t2k-thin90.a2m.gz, have 69729 columns in 289 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1ltzA/nostruct-align/1ltzA.t2k-thin90.a2m.gz # 1ltzA.t2k-thin90.a2m with 50 sequences, total weight= 13.8597 avg weight= 0.277194 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1ltzA/info/1ltzA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1ltzA/nostruct-align/1ltzA.t2k-thin90.a2m.gz, have 70003 columns in 290 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nar/nostruct-align/1nar.t2k-thin90.a2m.gz # 1nar.t2k-thin90.a2m with 150 sequences, total weight= 101.483 avg weight= 0.676553 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nar/info/1nar.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nar/nostruct-align/1nar.t2k-thin90.a2m.gz, have 70292 columns in 291 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mof/nostruct-align/1mof.t2k-thin90.a2m.gz # 1mof.t2k-thin90.a2m with 21 sequences, total weight= 4.75675 avg weight= 0.226512 20 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mof/info/1mof.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mof/nostruct-align/1mof.t2k-thin90.a2m.gz, have 70345 columns in 292 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kyfA/nostruct-align/1kyfA.t2k-thin90.a2m.gz # 1kyfA.t2k-thin90.a2m with 14 sequences, total weight= 14 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25372 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kyfA/info/1kyfA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kyfA/nostruct-align/1kyfA.t2k-thin90.a2m.gz, have 70592 columns in 293 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dozA/nostruct-align/1dozA.t2k-thin90.a2m.gz # 1dozA.t2k-thin90.a2m with 125 sequences, total weight= 45.061 avg weight= 0.360488 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dozA/info/1dozA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dozA/nostruct-align/1dozA.t2k-thin90.a2m.gz, have 70901 columns in 294 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lfpA/nostruct-align/1lfpA.t2k-thin90.a2m.gz # 1lfpA.t2k-thin90.a2m with 127 sequences, total weight= 17.4619 avg weight= 0.137495 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lfpA/info/1lfpA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lfpA/nostruct-align/1lfpA.t2k-thin90.a2m.gz, have 71144 columns in 295 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3h/3htsB/nostruct-align/3htsB.t2k-thin90.a2m.gz # 3htsB.t2k-thin90.a2m with 89 sequences, total weight= 17.0419 avg weight= 0.191482 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3h/3htsB/info/3htsB.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/3h/3htsB/nostruct-align/3htsB.t2k-thin90.a2m.gz, have 71226 columns in 296 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hnjA/nostruct-align/1hnjA.t2k-thin90.a2m.gz # 1hnjA.t2k-thin90.a2m with 271 sequences, total weight= 271 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16092 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hnjA/info/1hnjA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hnjA/nostruct-align/1hnjA.t2k-thin90.a2m.gz, have 71543 columns in 297 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m55A/nostruct-align/1m55A.t2k-thin90.a2m.gz # 1m55A.t2k-thin90.a2m with 13 sequences, total weight= 13 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26497 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m55A/info/1m55A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m55A/nostruct-align/1m55A.t2k-thin90.a2m.gz, have 71736 columns in 298 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jfbA/nostruct-align/1jfbA.t2k-thin90.a2m.gz # 1jfbA.t2k-thin90.a2m with 904 sequences, total weight= 904 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08832 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jfbA/info/1jfbA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jfbA/nostruct-align/1jfbA.t2k-thin90.a2m.gz, have 72135 columns in 299 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o7iA/nostruct-align/1o7iA.t2k-thin90.a2m.gz # 1o7iA.t2k-thin90.a2m with 82 sequences, total weight= 82 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27771 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o7iA/info/1o7iA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o7iA/nostruct-align/1o7iA.t2k-thin90.a2m.gz, have 72250 columns in 300 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n93X/nostruct-align/1n93X.t2k-thin90.a2m.gz # 1n93X.t2k-thin90.a2m with 5 sequences, total weight= 5 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27855 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n93X/info/1n93X.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n93X/nostruct-align/1n93X.t2k-thin90.a2m.gz, have 72585 columns in 301 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qq5A/nostruct-align/1qq5A.t2k-thin90.a2m.gz # 1qq5A.t2k-thin90.a2m with 272 sequences, total weight= 272 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00466 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qq5A/info/1qq5A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qq5A/nostruct-align/1qq5A.t2k-thin90.a2m.gz, have 72830 columns in 302 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f8eA/nostruct-align/1f8eA.t2k-thin90.a2m.gz # 1f8eA.t2k-thin90.a2m with 17 sequences, total weight= 4.62636 avg weight= 0.272139 19 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f8eA/info/1f8eA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f8eA/nostruct-align/1f8eA.t2k-thin90.a2m.gz, have 73218 columns in 303 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f9zA/nostruct-align/1f9zA.t2k-thin90.a2m.gz # 1f9zA.t2k-thin90.a2m with 293 sequences, total weight= 293 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.971132 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f9zA/info/1f9zA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f9zA/nostruct-align/1f9zA.t2k-thin90.a2m.gz, have 73346 columns in 304 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r5rA/nostruct-align/1r5rA.t2k-thin90.a2m.gz # 1r5rA.t2k-thin90.a2m with 100 sequences, total weight= 100 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07755 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r5rA/info/1r5rA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r5rA/nostruct-align/1r5rA.t2k-thin90.a2m.gz, have 73463 columns in 305 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uoyA/nostruct-align/1uoyA.t2k-thin90.a2m.gz # 1uoyA.t2k-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.691603 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uoyA/info/1uoyA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uoyA/nostruct-align/1uoyA.t2k-thin90.a2m.gz, have 73527 columns in 306 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kzqA/nostruct-align/1kzqA.t2k-thin90.a2m.gz # 1kzqA.t2k-thin90.a2m with 19 sequences, total weight= 15.4634 avg weight= 0.813865 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kzqA/info/1kzqA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kzqA/nostruct-align/1kzqA.t2k-thin90.a2m.gz, have 73780 columns in 307 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ow1A/nostruct-align/1ow1A.t2k-thin90.a2m.gz # 1ow1A.t2k-thin90.a2m with 10 sequences, total weight= 7.34533 avg weight= 0.734533 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ow1A/info/1ow1A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ow1A/nostruct-align/1ow1A.t2k-thin90.a2m.gz, have 73947 columns in 308 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m1nB/nostruct-align/1m1nB.t2k-thin90.a2m.gz # 1m1nB.t2k-thin90.a2m with 246 sequences, total weight= 246 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2831 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m1nB/info/1m1nB.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m1nB/nostruct-align/1m1nB.t2k-thin90.a2m.gz, have 74469 columns in 309 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iirA/nostruct-align/1iirA.t2k-thin90.a2m.gz # 1iirA.t2k-thin90.a2m with 244 sequences, total weight= 244 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04368 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iirA/info/1iirA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iirA/nostruct-align/1iirA.t2k-thin90.a2m.gz, have 74851 columns in 310 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j54A/nostruct-align/1j54A.t2k-thin90.a2m.gz # 1j54A.t2k-thin90.a2m with 294 sequences, total weight= 294 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26435 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j54A/info/1j54A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j54A/nostruct-align/1j54A.t2k-thin90.a2m.gz, have 75025 columns in 311 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qw2A/nostruct-align/1qw2A.t2k-thin90.a2m.gz # 1qw2A.t2k-thin90.a2m with 12 sequences, total weight= 6.36717 avg weight= 0.530597 20 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qw2A/info/1qw2A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qw2A/nostruct-align/1qw2A.t2k-thin90.a2m.gz, have 75127 columns in 312 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vkfA/nostruct-align/1vkfA.t2k-thin90.a2m.gz # 1vkfA.t2k-thin90.a2m with 22 sequences, total weight= 8.8752 avg weight= 0.403418 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vkfA/info/1vkfA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vkfA/nostruct-align/1vkfA.t2k-thin90.a2m.gz, have 75299 columns in 313 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v4vA/nostruct-align/1v4vA.t2k-thin90.a2m.gz # 1v4vA.t2k-thin90.a2m with 142 sequences, total weight= 62.0011 avg weight= 0.436627 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v4vA/info/1v4vA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v4vA/nostruct-align/1v4vA.t2k-thin90.a2m.gz, have 75672 columns in 314 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wd3A/nostruct-align/1wd3A.t2k-thin90.a2m.gz # 1wd3A.t2k-thin90.a2m with 19 sequences, total weight= 6.23245 avg weight= 0.328024 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wd3A/info/1wd3A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wd3A/nostruct-align/1wd3A.t2k-thin90.a2m.gz, have 76154 columns in 315 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iuaA/nostruct-align/1iuaA.t2k-thin90.a2m.gz # 1iuaA.t2k-thin90.a2m with 18 sequences, total weight= 7.7566 avg weight= 0.430922 20 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iuaA/info/1iuaA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iuaA/nostruct-align/1iuaA.t2k-thin90.a2m.gz, have 76237 columns in 316 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r7aA/nostruct-align/1r7aA.t2k-thin90.a2m.gz # 1r7aA.t2k-thin90.a2m with 299 sequences, total weight= 299 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24673 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r7aA/info/1r7aA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r7aA/nostruct-align/1r7aA.t2k-thin90.a2m.gz, have 76741 columns in 317 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lqtA/nostruct-align/1lqtA.t2k-thin90.a2m.gz # 1lqtA.t2k-thin90.a2m with 302 sequences, total weight= 302 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15872 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lqtA/info/1lqtA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lqtA/nostruct-align/1lqtA.t2k-thin90.a2m.gz, have 77193 columns in 318 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qsgA/nostruct-align/1qsgA.t2k-thin90.a2m.gz # 1qsgA.t2k-thin90.a2m with 924 sequences, total weight= 281.41 avg weight= 0.304556 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31194 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qsgA/info/1qsgA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qsgA/nostruct-align/1qsgA.t2k-thin90.a2m.gz, have 77451 columns in 319 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1amf/nostruct-align/1amf.t2k-thin90.a2m.gz # 1amf.t2k-thin90.a2m with 166 sequences, total weight= 166 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14131 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1amf/info/1amf.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1a/1amf/nostruct-align/1amf.t2k-thin90.a2m.gz, have 77682 columns in 320 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1llnA/nostruct-align/1llnA.t2k-thin90.a2m.gz # 1llnA.t2k-thin90.a2m with 79 sequences, total weight= 52.3117 avg weight= 0.662173 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1llnA/info/1llnA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1llnA/nostruct-align/1llnA.t2k-thin90.a2m.gz, have 77944 columns in 321 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jyhA/nostruct-align/1jyhA.t2k-thin90.a2m.gz # 1jyhA.t2k-thin90.a2m with 44 sequences, total weight= 44 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23651 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jyhA/info/1jyhA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jyhA/nostruct-align/1jyhA.t2k-thin90.a2m.gz, have 78099 columns in 322 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hdoA/nostruct-align/1hdoA.t2k-thin90.a2m.gz # 1hdoA.t2k-thin90.a2m with 256 sequences, total weight= 256 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06571 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hdoA/info/1hdoA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hdoA/nostruct-align/1hdoA.t2k-thin90.a2m.gz, have 78304 columns in 323 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1udzA/nostruct-align/1udzA.t2k-thin90.a2m.gz # 1udzA.t2k-thin90.a2m with 1042 sequences, total weight= 113.417 avg weight= 0.108846 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30724 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1udzA/info/1udzA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1udzA/nostruct-align/1udzA.t2k-thin90.a2m.gz, have 78483 columns in 324 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1luzA/nostruct-align/1luzA.t2k-thin90.a2m.gz # 1luzA.t2k-thin90.a2m with 148 sequences, total weight= 43.7609 avg weight= 0.295682 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1luzA/info/1luzA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1luzA/nostruct-align/1luzA.t2k-thin90.a2m.gz, have 78568 columns in 325 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rdqE/nostruct-align/1rdqE.t2k-thin90.a2m.gz # 1rdqE.t2k-thin90.a2m with 6417 sequences, total weight= 6417 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15093 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rdqE/info/1rdqE.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rdqE/nostruct-align/1rdqE.t2k-thin90.a2m.gz, have 78910 columns in 326 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k-thin90.a2m.gz # 1dosA.t2k-thin90.a2m with 167 sequences, total weight= 22.7326 avg weight= 0.136124 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dosA/info/1dosA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k-thin90.a2m.gz, have 79268 columns in 327 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iqzA/nostruct-align/1iqzA.t2k-thin90.a2m.gz # 1iqzA.t2k-thin90.a2m with 302 sequences, total weight= 302 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23228 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iqzA/info/1iqzA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iqzA/nostruct-align/1iqzA.t2k-thin90.a2m.gz, have 79349 columns in 328 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iomA/nostruct-align/1iomA.t2k-thin90.a2m.gz # 1iomA.t2k-thin90.a2m with 223 sequences, total weight= 51.5802 avg weight= 0.231301 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iomA/info/1iomA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iomA/nostruct-align/1iomA.t2k-thin90.a2m.gz, have 79723 columns in 329 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n4wA/nostruct-align/1n4wA.t2k-thin90.a2m.gz # 1n4wA.t2k-thin90.a2m with 317 sequences, total weight= 317 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08592 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n4wA/info/1n4wA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n4wA/nostruct-align/1n4wA.t2k-thin90.a2m.gz, have 80221 columns in 330 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d7pM/nostruct-align/1d7pM.t2k-thin90.a2m.gz # 1d7pM.t2k-thin90.a2m with 111 sequences, total weight= 46.9024 avg weight= 0.422544 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d7pM/info/1d7pM.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d7pM/nostruct-align/1d7pM.t2k-thin90.a2m.gz, have 80380 columns in 331 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1ja9A/nostruct-align/1ja9A.t2k-thin90.a2m.gz # 1ja9A.t2k-thin90.a2m with 1793 sequences, total weight= 1793 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22234 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1ja9A/info/1ja9A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1ja9A/nostruct-align/1ja9A.t2k-thin90.a2m.gz, have 80639 columns in 332 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hdkA/nostruct-align/1hdkA.t2k-thin90.a2m.gz # 1hdkA.t2k-thin90.a2m with 159 sequences, total weight= 99.2369 avg weight= 0.624132 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3004 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hdkA/info/1hdkA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hdkA/nostruct-align/1hdkA.t2k-thin90.a2m.gz, have 80778 columns in 333 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ii5A/nostruct-align/1ii5A.t2k-thin90.a2m.gz # 1ii5A.t2k-thin90.a2m with 219 sequences, total weight= 219 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22134 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ii5A/info/1ii5A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ii5A/nostruct-align/1ii5A.t2k-thin90.a2m.gz, have 80999 columns in 334 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bkf/nostruct-align/1bkf.t2k-thin90.a2m.gz # 1bkf.t2k-thin90.a2m with 244 sequences, total weight= 59.2323 avg weight= 0.242755 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30045 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bkf/info/1bkf.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bkf/nostruct-align/1bkf.t2k-thin90.a2m.gz, have 81106 columns in 335 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bebA/nostruct-align/1bebA.t2k-thin90.a2m.gz # 1bebA.t2k-thin90.a2m with 119 sequences, total weight= 119 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27145 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bebA/info/1bebA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bebA/nostruct-align/1bebA.t2k-thin90.a2m.gz, have 81262 columns in 336 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m22A/nostruct-align/1m22A.t2k-thin90.a2m.gz # 1m22A.t2k-thin90.a2m with 342 sequences, total weight= 342 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28892 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m22A/info/1m22A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m22A/nostruct-align/1m22A.t2k-thin90.a2m.gz, have 81749 columns in 337 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oafA/nostruct-align/1oafA.t2k-thin90.a2m.gz # 1oafA.t2k-thin90.a2m with 441 sequences, total weight= 59.8782 avg weight= 0.135778 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30076 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oafA/info/1oafA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oafA/nostruct-align/1oafA.t2k-thin90.a2m.gz, have 81999 columns in 338 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vd5A/nostruct-align/1vd5A.t2k-thin90.a2m.gz # 1vd5A.t2k-thin90.a2m with 30 sequences, total weight= 17.5825 avg weight= 0.586084 31 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vd5A/info/1vd5A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vd5A/nostruct-align/1vd5A.t2k-thin90.a2m.gz, have 82376 columns in 339 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dp7P/nostruct-align/1dp7P.t2k-thin90.a2m.gz # 1dp7P.t2k-thin90.a2m with 19 sequences, total weight= 6.66966 avg weight= 0.351035 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dp7P/info/1dp7P.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dp7P/nostruct-align/1dp7P.t2k-thin90.a2m.gz, have 82452 columns in 340 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v2bA/nostruct-align/1v2bA.t2k-thin90.a2m.gz # 1v2bA.t2k-thin90.a2m with 41 sequences, total weight= 21.3027 avg weight= 0.519579 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v2bA/info/1v2bA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v2bA/nostruct-align/1v2bA.t2k-thin90.a2m.gz, have 82600 columns in 341 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d02A/nostruct-align/1d02A.t2k-thin90.a2m.gz # 1d02A.t2k-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.615068 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d02A/info/1d02A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d02A/nostruct-align/1d02A.t2k-thin90.a2m.gz, have 82797 columns in 342 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gp6A/nostruct-align/1gp6A.t2k-thin90.a2m.gz # 1gp6A.t2k-thin90.a2m with 327 sequences, total weight= 221.11 avg weight= 0.676177 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30237 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gp6A/info/1gp6A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gp6A/nostruct-align/1gp6A.t2k-thin90.a2m.gz, have 83146 columns in 343 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rz2A/nostruct-align/1rz2A.t2k-thin90.a2m.gz # 1rz2A.t2k-thin90.a2m with 23 sequences, total weight= 23 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26257 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rz2A/info/1rz2A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rz2A/nostruct-align/1rz2A.t2k-thin90.a2m.gz, have 83360 columns in 344 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1io7A/nostruct-align/1io7A.t2k-thin90.a2m.gz # 1io7A.t2k-thin90.a2m with 1003 sequences, total weight= 1003 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07008 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1io7A/info/1io7A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1io7A/nostruct-align/1io7A.t2k-thin90.a2m.gz, have 83726 columns in 345 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uwwA/nostruct-align/1uwwA.t2k-thin90.a2m.gz # 1uwwA.t2k-thin90.a2m with 7 sequences, total weight= 2.93433 avg weight= 0.41919 13 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uwwA/info/1uwwA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uwwA/nostruct-align/1uwwA.t2k-thin90.a2m.gz, have 83910 columns in 346 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pinA/nostruct-align/1pinA.t2k-thin90.a2m.gz # 1pinA.t2k-thin90.a2m with 285 sequences, total weight= 116.244 avg weight= 0.407874 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30055 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pinA/info/1pinA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pinA/nostruct-align/1pinA.t2k-thin90.a2m.gz, have 84063 columns in 347 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h75A/nostruct-align/1h75A.t2k-thin90.a2m.gz # 1h75A.t2k-thin90.a2m with 190 sequences, total weight= 102.105 avg weight= 0.537396 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30032 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h75A/info/1h75A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h75A/nostruct-align/1h75A.t2k-thin90.a2m.gz, have 84139 columns in 348 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ispA/nostruct-align/1ispA.t2k-thin90.a2m.gz # 1ispA.t2k-thin90.a2m with 267 sequences, total weight= 267 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.893598 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ispA/info/1ispA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ispA/nostruct-align/1ispA.t2k-thin90.a2m.gz, have 84318 columns in 349 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qh5A/nostruct-align/1qh5A.t2k-thin90.a2m.gz # 1qh5A.t2k-thin90.a2m with 447 sequences, total weight= 447 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19939 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qh5A/info/1qh5A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qh5A/nostruct-align/1qh5A.t2k-thin90.a2m.gz, have 84578 columns in 350 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cs1A/nostruct-align/1cs1A.t2k-thin90.a2m.gz # 1cs1A.t2k-thin90.a2m with 399 sequences, total weight= 399 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12719 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cs1A/info/1cs1A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cs1A/nostruct-align/1cs1A.t2k-thin90.a2m.gz, have 84962 columns in 351 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v0wA/nostruct-align/1v0wA.t2k-thin90.a2m.gz # 1v0wA.t2k-thin90.a2m with 154 sequences, total weight= 154 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0475 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v0wA/info/1v0wA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v0wA/nostruct-align/1v0wA.t2k-thin90.a2m.gz, have 85458 columns in 352 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n08A/nostruct-align/1n08A.t2k-thin90.a2m.gz # 1n08A.t2k-thin90.a2m with 105 sequences, total weight= 24.6077 avg weight= 0.234359 43 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n08A/info/1n08A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n08A/nostruct-align/1n08A.t2k-thin90.a2m.gz, have 85612 columns in 353 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lc5A/nostruct-align/1lc5A.t2k-thin90.a2m.gz # 1lc5A.t2k-thin90.a2m with 610 sequences, total weight= 610 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09345 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lc5A/info/1lc5A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lc5A/nostruct-align/1lc5A.t2k-thin90.a2m.gz, have 85967 columns in 354 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r5yA/nostruct-align/1r5yA.t2k-thin90.a2m.gz # 1r5yA.t2k-thin90.a2m with 553 sequences, total weight= 49.3048 avg weight= 0.0891588 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r5yA/info/1r5yA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r5yA/nostruct-align/1r5yA.t2k-thin90.a2m.gz, have 86328 columns in 355 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cl8A/nostruct-align/1cl8A.t2k-thin90.a2m.gz # 1cl8A.t2k-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05782 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cl8A/info/1cl8A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cl8A/nostruct-align/1cl8A.t2k-thin90.a2m.gz, have 86589 columns in 356 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1je0A/nostruct-align/1je0A.t2k-thin90.a2m.gz # 1je0A.t2k-thin90.a2m with 162 sequences, total weight= 99.0761 avg weight= 0.611581 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30076 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1je0A/info/1je0A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1je0A/nostruct-align/1je0A.t2k-thin90.a2m.gz, have 86815 columns in 357 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gnyA/nostruct-align/1gnyA.t2k-thin90.a2m.gz # 1gnyA.t2k-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13963 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gnyA/info/1gnyA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gnyA/nostruct-align/1gnyA.t2k-thin90.a2m.gz, have 86968 columns in 358 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uwcA/nostruct-align/1uwcA.t2k-thin90.a2m.gz # 1uwcA.t2k-thin90.a2m with 198 sequences, total weight= 198 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03367 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uwcA/info/1uwcA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uwcA/nostruct-align/1uwcA.t2k-thin90.a2m.gz, have 87229 columns in 359 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ooeA/nostruct-align/1ooeA.t2k-thin90.a2m.gz # 1ooeA.t2k-thin90.a2m with 810 sequences, total weight= 741.07 avg weight= 0.914901 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30158 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ooeA/info/1ooeA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ooeA/nostruct-align/1ooeA.t2k-thin90.a2m.gz, have 87464 columns in 360 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o7jA/nostruct-align/1o7jA.t2k-thin90.a2m.gz # 1o7jA.t2k-thin90.a2m with 125 sequences, total weight= 55.477 avg weight= 0.443816 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30034 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o7jA/info/1o7jA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o7jA/nostruct-align/1o7jA.t2k-thin90.a2m.gz, have 87789 columns in 361 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uvqA/nostruct-align/1uvqA.t2k-thin90.a2m.gz # 1uvqA.t2k-thin90.a2m with 1912 sequences, total weight= 1912 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22925 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uvqA/info/1uvqA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uvqA/nostruct-align/1uvqA.t2k-thin90.a2m.gz, have 87971 columns in 362 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m6sA/nostruct-align/1m6sA.t2k-thin90.a2m.gz # 1m6sA.t2k-thin90.a2m with 962 sequences, total weight= 962 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.925492 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m6sA/info/1m6sA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m6sA/nostruct-align/1m6sA.t2k-thin90.a2m.gz, have 88314 columns in 363 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vm0A/nostruct-align/1vm0A.t2k-thin90.a2m.gz # 1vm0A.t2k-thin90.a2m with 5 sequences, total weight= 3.07002 avg weight= 0.614004 10 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vm0A/info/1vm0A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vm0A/nostruct-align/1vm0A.t2k-thin90.a2m.gz, have 88407 columns in 364 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e0cA/nostruct-align/1e0cA.t2k-thin90.a2m.gz # 1e0cA.t2k-thin90.a2m with 295 sequences, total weight= 295 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25252 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e0cA/info/1e0cA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e0cA/nostruct-align/1e0cA.t2k-thin90.a2m.gz, have 88678 columns in 365 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1usgA/nostruct-align/1usgA.t2k-thin90.a2m.gz # 1usgA.t2k-thin90.a2m with 421 sequences, total weight= 421 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05605 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1usgA/info/1usgA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1usgA/nostruct-align/1usgA.t2k-thin90.a2m.gz, have 89023 columns in 366 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1ga6A/nostruct-align/1ga6A.t2k-thin90.a2m.gz # 1ga6A.t2k-thin90.a2m with 153 sequences, total weight= 153 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12256 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1ga6A/info/1ga6A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1ga6A/nostruct-align/1ga6A.t2k-thin90.a2m.gz, have 89392 columns in 367 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1agjA/nostruct-align/1agjA.t2k-thin90.a2m.gz # 1agjA.t2k-thin90.a2m with 353 sequences, total weight= 353 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14141 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1agjA/info/1agjA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1a/1agjA/nostruct-align/1agjA.t2k-thin90.a2m.gz, have 89634 columns in 368 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1se8A/nostruct-align/1se8A.t2k-thin90.a2m.gz # 1se8A.t2k-thin90.a2m with 219 sequences, total weight= 57.6539 avg weight= 0.26326 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1se8A/info/1se8A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1se8A/nostruct-align/1se8A.t2k-thin90.a2m.gz, have 89847 columns in 369 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pot/nostruct-align/1pot.t2k-thin90.a2m.gz # 1pot.t2k-thin90.a2m with 446 sequences, total weight= 446 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01073 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pot/info/1pot.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pot/nostruct-align/1pot.t2k-thin90.a2m.gz, have 90169 columns in 370 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vie/nostruct-align/1vie.t2k-thin90.a2m.gz # 1vie.t2k-thin90.a2m with 3 sequences, total weight= 1.86924 avg weight= 0.62308 8 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vie/info/1vie.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vie/nostruct-align/1vie.t2k-thin90.a2m.gz, have 90229 columns in 371 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dk0A/nostruct-align/1dk0A.t2k-thin90.a2m.gz # 1dk0A.t2k-thin90.a2m with 5 sequences, total weight= 4.9644 avg weight= 0.99288 9 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dk0A/info/1dk0A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dk0A/nostruct-align/1dk0A.t2k-thin90.a2m.gz, have 90402 columns in 372 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r6jA/nostruct-align/1r6jA.t2k-thin90.a2m.gz # 1r6jA.t2k-thin90.a2m with 217 sequences, total weight= 58.5013 avg weight= 0.269591 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r6jA/info/1r6jA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r6jA/nostruct-align/1r6jA.t2k-thin90.a2m.gz, have 90484 columns in 373 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h7cA/nostruct-align/1h7cA.t2k-thin90.a2m.gz # 1h7cA.t2k-thin90.a2m with 20 sequences, total weight= 15.4507 avg weight= 0.772533 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h7cA/info/1h7cA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h7cA/nostruct-align/1h7cA.t2k-thin90.a2m.gz, have 90587 columns in 374 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1elwA/nostruct-align/1elwA.t2k-thin90.a2m.gz # 1elwA.t2k-thin90.a2m with 704 sequences, total weight= 704 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07441 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1elwA/info/1elwA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1elwA/nostruct-align/1elwA.t2k-thin90.a2m.gz, have 90704 columns in 375 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1aho/nostruct-align/1aho.t2k-thin90.a2m.gz # 1aho.t2k-thin90.a2m with 97 sequences, total weight= 11.1316 avg weight= 0.114759 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1aho/info/1aho.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1a/1aho/nostruct-align/1aho.t2k-thin90.a2m.gz, have 90768 columns in 376 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oewA/nostruct-align/1oewA.t2k-thin90.a2m.gz # 1oewA.t2k-thin90.a2m with 359 sequences, total weight= 182.735 avg weight= 0.509011 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30454 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oewA/info/1oewA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oewA/nostruct-align/1oewA.t2k-thin90.a2m.gz, have 91096 columns in 377 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rk6A/nostruct-align/1rk6A.t2k-thin90.a2m.gz # 1rk6A.t2k-thin90.a2m with 1235 sequences, total weight= 1235 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.899771 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rk6A/info/1rk6A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rk6A/nostruct-align/1rk6A.t2k-thin90.a2m.gz, have 91570 columns in 378 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o9iA/nostruct-align/1o9iA.t2k-thin90.a2m.gz # 1o9iA.t2k-thin90.a2m with 38 sequences, total weight= 16.4533 avg weight= 0.432982 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o9iA/info/1o9iA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o9iA/nostruct-align/1o9iA.t2k-thin90.a2m.gz, have 91836 columns in 379 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jboA/nostruct-align/1jboA.t2k-thin90.a2m.gz # 1jboA.t2k-thin90.a2m with 192 sequences, total weight= 20.4892 avg weight= 0.106715 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jboA/info/1jboA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jboA/nostruct-align/1jboA.t2k-thin90.a2m.gz, have 91998 columns in 380 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1ne9A/nostruct-align/1ne9A.t2k-thin90.a2m.gz # 1ne9A.t2k-thin90.a2m with 79 sequences, total weight= 79 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11299 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1ne9A/info/1ne9A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1ne9A/nostruct-align/1ne9A.t2k-thin90.a2m.gz, have 92333 columns in 381 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nwaA/nostruct-align/1nwaA.t2k-thin90.a2m.gz # 1nwaA.t2k-thin90.a2m with 191 sequences, total weight= 16.6651 avg weight= 0.087252 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nwaA/info/1nwaA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nwaA/nostruct-align/1nwaA.t2k-thin90.a2m.gz, have 92501 columns in 382 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j83A/nostruct-align/1j83A.t2k-thin90.a2m.gz # 1j83A.t2k-thin90.a2m with 7 sequences, total weight= 2.97216 avg weight= 0.424594 12 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j83A/info/1j83A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j83A/nostruct-align/1j83A.t2k-thin90.a2m.gz, have 92681 columns in 383 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kqfA/nostruct-align/1kqfA.t2k-thin90.a2m.gz # 1kqfA.t2k-thin90.a2m with 235 sequences, total weight= 235 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12284 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kqfA/info/1kqfA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kqfA/nostruct-align/1kqfA.t2k-thin90.a2m.gz, have 93663 columns in 384 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3p/3proC/nostruct-align/3proC.t2k-thin90.a2m.gz # 3proC.t2k-thin90.a2m with 25 sequences, total weight= 13.9925 avg weight= 0.559699 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3p/3proC/info/3proC.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/3p/3proC/nostruct-align/3proC.t2k-thin90.a2m.gz, have 93813 columns in 385 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mtyB/nostruct-align/1mtyB.t2k-thin90.a2m.gz # 1mtyB.t2k-thin90.a2m with 22 sequences, total weight= 18.2255 avg weight= 0.82843 20 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mtyB/info/1mtyB.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mtyB/nostruct-align/1mtyB.t2k-thin90.a2m.gz, have 94197 columns in 386 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v7rA/nostruct-align/1v7rA.t2k-thin90.a2m.gz # 1v7rA.t2k-thin90.a2m with 150 sequences, total weight= 22.0616 avg weight= 0.147077 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v7rA/info/1v7rA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v7rA/nostruct-align/1v7rA.t2k-thin90.a2m.gz, have 94383 columns in 387 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54E/nostruct-align/1v54E.t2k-thin90.a2m.gz # 1v54E.t2k-thin90.a2m with 12 sequences, total weight= 4.33095 avg weight= 0.360913 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54E/info/1v54E.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v54E/nostruct-align/1v54E.t2k-thin90.a2m.gz, have 94488 columns in 388 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ujpA/nostruct-align/1ujpA.t2k-thin90.a2m.gz # 1ujpA.t2k-thin90.a2m with 154 sequences, total weight= 25.2489 avg weight= 0.163954 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ujpA/info/1ujpA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ujpA/nostruct-align/1ujpA.t2k-thin90.a2m.gz, have 94731 columns in 389 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q4uA/nostruct-align/1q4uA.t2k-thin90.a2m.gz # 1q4uA.t2k-thin90.a2m with 142 sequences, total weight= 142 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.265 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q4uA/info/1q4uA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q4uA/nostruct-align/1q4uA.t2k-thin90.a2m.gz, have 94871 columns in 390 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1odzA/nostruct-align/1odzA.t2k-thin90.a2m.gz # 1odzA.t2k-thin90.a2m with 31 sequences, total weight= 31 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20806 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1odzA/info/1odzA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1odzA/nostruct-align/1odzA.t2k-thin90.a2m.gz, have 95250 columns in 391 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h70A/nostruct-align/1h70A.t2k-thin90.a2m.gz # 1h70A.t2k-thin90.a2m with 63 sequences, total weight= 56.7561 avg weight= 0.900891 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h70A/info/1h70A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h70A/nostruct-align/1h70A.t2k-thin90.a2m.gz, have 95505 columns in 392 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nkd/nostruct-align/1nkd.t2k-thin90.a2m.gz # 1nkd.t2k-thin90.a2m with 13 sequences, total weight= 3.63376 avg weight= 0.27952 13 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nkd/info/1nkd.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nkd/nostruct-align/1nkd.t2k-thin90.a2m.gz, have 95564 columns in 393 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jatB/nostruct-align/1jatB.t2k-thin90.a2m.gz # 1jatB.t2k-thin90.a2m with 165 sequences, total weight= 41.9075 avg weight= 0.253985 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jatB/info/1jatB.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jatB/nostruct-align/1jatB.t2k-thin90.a2m.gz, have 95696 columns in 394 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ug6A/nostruct-align/1ug6A.t2k-thin90.a2m.gz # 1ug6A.t2k-thin90.a2m with 343 sequences, total weight= 48.052 avg weight= 0.140093 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30041 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ug6A/info/1ug6A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ug6A/nostruct-align/1ug6A.t2k-thin90.a2m.gz, have 96122 columns in 395 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xfiA/nostruct-align/1xfiA.t2k-thin90.a2m.gz # 1xfiA.t2k-thin90.a2m with 33 sequences, total weight= 22.0413 avg weight= 0.667918 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xfiA/info/1xfiA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xfiA/nostruct-align/1xfiA.t2k-thin90.a2m.gz, have 96465 columns in 396 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p4oA/nostruct-align/1p4oA.t2k-thin90.a2m.gz # 1p4oA.t2k-thin90.a2m with 4314 sequences, total weight= 4314 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15208 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p4oA/info/1p4oA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p4oA/nostruct-align/1p4oA.t2k-thin90.a2m.gz, have 96773 columns in 397 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1plc/nostruct-align/1plc.t2k-thin90.a2m.gz # 1plc.t2k-thin90.a2m with 118 sequences, total weight= 101.813 avg weight= 0.862818 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1plc/info/1plc.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1plc/nostruct-align/1plc.t2k-thin90.a2m.gz, have 96872 columns in 398 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1ajsA/nostruct-align/1ajsA.t2k-thin90.a2m.gz # 1ajsA.t2k-thin90.a2m with 289 sequences, total weight= 289 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20284 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1ajsA/info/1ajsA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1a/1ajsA/nostruct-align/1ajsA.t2k-thin90.a2m.gz, have 97284 columns in 399 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c3cA/nostruct-align/1c3cA.t2k-thin90.a2m.gz # 1c3cA.t2k-thin90.a2m with 225 sequences, total weight= 139.495 avg weight= 0.619978 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30161 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c3cA/info/1c3cA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1c/1c3cA/nostruct-align/1c3cA.t2k-thin90.a2m.gz, have 97708 columns in 400 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mzbA/nostruct-align/1mzbA.t2k-thin90.a2m.gz # 1mzbA.t2k-thin90.a2m with 239 sequences, total weight= 124.058 avg weight= 0.519072 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30205 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mzbA/info/1mzbA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mzbA/nostruct-align/1mzbA.t2k-thin90.a2m.gz, have 97841 columns in 401 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1odmA/nostruct-align/1odmA.t2k-thin90.a2m.gz # 1odmA.t2k-thin90.a2m with 386 sequences, total weight= 183.715 avg weight= 0.475945 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30331 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1odmA/info/1odmA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1odmA/nostruct-align/1odmA.t2k-thin90.a2m.gz, have 98170 columns in 402 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cmcA/nostruct-align/1cmcA.t2k-thin90.a2m.gz # 1cmcA.t2k-thin90.a2m with 8 sequences, total weight= 2.19252 avg weight= 0.274065 10 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cmcA/info/1cmcA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cmcA/nostruct-align/1cmcA.t2k-thin90.a2m.gz, have 98274 columns in 403 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c1kA/nostruct-align/1c1kA.t2k-thin90.a2m.gz # 1c1kA.t2k-thin90.a2m with 6 sequences, total weight= 4.32128 avg weight= 0.720213 14 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c1kA/info/1c1kA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1c/1c1kA/nostruct-align/1c1kA.t2k-thin90.a2m.gz, have 98491 columns in 404 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o54A/nostruct-align/1o54A.t2k-thin90.a2m.gz # 1o54A.t2k-thin90.a2m with 874 sequences, total weight= 874 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.896727 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o54A/info/1o54A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o54A/nostruct-align/1o54A.t2k-thin90.a2m.gz, have 98756 columns in 405 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oruA/nostruct-align/1oruA.t2k-thin90.a2m.gz # 1oruA.t2k-thin90.a2m with 15 sequences, total weight= 14.9415 avg weight= 0.9961 11 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oruA/info/1oruA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oruA/nostruct-align/1oruA.t2k-thin90.a2m.gz, have 98938 columns in 406 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gutA/nostruct-align/1gutA.t2k-thin90.a2m.gz # 1gutA.t2k-thin90.a2m with 126 sequences, total weight= 26.2968 avg weight= 0.208705 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gutA/info/1gutA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gutA/nostruct-align/1gutA.t2k-thin90.a2m.gz, have 99005 columns in 407 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gxmA/nostruct-align/1gxmA.t2k-thin90.a2m.gz # 1gxmA.t2k-thin90.a2m with 21 sequences, total weight= 14.7586 avg weight= 0.70279 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gxmA/info/1gxmA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gxmA/nostruct-align/1gxmA.t2k-thin90.a2m.gz, have 99329 columns in 408 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g55A/nostruct-align/1g55A.t2k-thin90.a2m.gz # 1g55A.t2k-thin90.a2m with 261 sequences, total weight= 261 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11913 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g55A/info/1g55A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g55A/nostruct-align/1g55A.t2k-thin90.a2m.gz, have 99642 columns in 409 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cqxA/nostruct-align/1cqxA.t2k-thin90.a2m.gz # 1cqxA.t2k-thin90.a2m with 559 sequences, total weight= 559 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13902 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cqxA/info/1cqxA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cqxA/nostruct-align/1cqxA.t2k-thin90.a2m.gz, have 100045 columns in 410 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1txlA/nostruct-align/1txlA.t2k-thin90.a2m.gz # 1txlA.t2k-thin90.a2m with 18 sequences, total weight= 5.63798 avg weight= 0.313221 20 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1txlA/info/1txlA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1txlA/nostruct-align/1txlA.t2k-thin90.a2m.gz, have 100233 columns in 411 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ud9A/nostruct-align/1ud9A.t2k-thin90.a2m.gz # 1ud9A.t2k-thin90.a2m with 103 sequences, total weight= 103 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26862 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ud9A/info/1ud9A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ud9A/nostruct-align/1ud9A.t2k-thin90.a2m.gz, have 100475 columns in 412 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qjpA/nostruct-align/1qjpA.t2k-thin90.a2m.gz # 1qjpA.t2k-thin90.a2m with 141 sequences, total weight= 141 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27572 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qjpA/info/1qjpA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qjpA/nostruct-align/1qjpA.t2k-thin90.a2m.gz, have 100612 columns in 413 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1of8A/nostruct-align/1of8A.t2k-thin90.a2m.gz # 1of8A.t2k-thin90.a2m with 279 sequences, total weight= 23.0937 avg weight= 0.082773 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1of8A/info/1of8A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1of8A/nostruct-align/1of8A.t2k-thin90.a2m.gz, have 100951 columns in 414 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ufyA/nostruct-align/1ufyA.t2k-thin90.a2m.gz # 1ufyA.t2k-thin90.a2m with 23 sequences, total weight= 6.43886 avg weight= 0.279951 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ufyA/info/1ufyA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ufyA/nostruct-align/1ufyA.t2k-thin90.a2m.gz, have 101072 columns in 415 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qz5A/nostruct-align/1qz5A.t2k-thin90.a2m.gz # 1qz5A.t2k-thin90.a2m with 322 sequences, total weight= 168.573 avg weight= 0.523518 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30299 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qz5A/info/1qz5A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qz5A/nostruct-align/1qz5A.t2k-thin90.a2m.gz, have 101431 columns in 416 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v7wA/nostruct-align/1v7wA.t2k-thin90.a2m.gz # 1v7wA.t2k-thin90.a2m with 89 sequences, total weight= 89 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16944 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v7wA/info/1v7wA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v7wA/nostruct-align/1v7wA.t2k-thin90.a2m.gz, have 102210 columns in 417 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mk0A/nostruct-align/1mk0A.t2k-thin90.a2m.gz # 1mk0A.t2k-thin90.a2m with 99 sequences, total weight= 85.1132 avg weight= 0.85973 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mk0A/info/1mk0A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mk0A/nostruct-align/1mk0A.t2k-thin90.a2m.gz, have 102307 columns in 418 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1euwA/nostruct-align/1euwA.t2k-thin90.a2m.gz # 1euwA.t2k-thin90.a2m with 274 sequences, total weight= 126.541 avg weight= 0.46183 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1euwA/info/1euwA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1euwA/nostruct-align/1euwA.t2k-thin90.a2m.gz, have 102443 columns in 419 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nnfA/nostruct-align/1nnfA.t2k-thin90.a2m.gz # 1nnfA.t2k-thin90.a2m with 270 sequences, total weight= 270 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.948348 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nnfA/info/1nnfA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nnfA/nostruct-align/1nnfA.t2k-thin90.a2m.gz, have 102751 columns in 420 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1ah7/nostruct-align/1ah7.t2k-thin90.a2m.gz # 1ah7.t2k-thin90.a2m with 20 sequences, total weight= 17.5643 avg weight= 0.878217 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1ah7/info/1ah7.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1a/1ah7/nostruct-align/1ah7.t2k-thin90.a2m.gz, have 102996 columns in 421 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i88A/nostruct-align/1i88A.t2k-thin90.a2m.gz # 1i88A.t2k-thin90.a2m with 204 sequences, total weight= 107.491 avg weight= 0.526916 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30088 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i88A/info/1i88A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i88A/nostruct-align/1i88A.t2k-thin90.a2m.gz, have 103385 columns in 422 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iyhA/nostruct-align/1iyhA.t2k-thin90.a2m.gz # 1iyhA.t2k-thin90.a2m with 428 sequences, total weight= 428 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14088 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iyhA/info/1iyhA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iyhA/nostruct-align/1iyhA.t2k-thin90.a2m.gz, have 103583 columns in 423 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qksA/nostruct-align/1qksA.t2k-thin90.a2m.gz # 1qksA.t2k-thin90.a2m with 250 sequences, total weight= 84.1909 avg weight= 0.336764 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qksA/info/1qksA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qksA/nostruct-align/1qksA.t2k-thin90.a2m.gz, have 104142 columns in 424 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3c/3cla/nostruct-align/3cla.t2k-thin90.a2m.gz # 3cla.t2k-thin90.a2m with 30 sequences, total weight= 16.6191 avg weight= 0.553971 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3c/3cla/info/3cla.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/3c/3cla/nostruct-align/3cla.t2k-thin90.a2m.gz, have 104355 columns in 425 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rzhH/nostruct-align/1rzhH.t2k-thin90.a2m.gz # 1rzhH.t2k-thin90.a2m with 26 sequences, total weight= 5.65916 avg weight= 0.21766 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rzhH/info/1rzhH.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rzhH/nostruct-align/1rzhH.t2k-thin90.a2m.gz, have 104593 columns in 426 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p1mA/nostruct-align/1p1mA.t2k-thin90.a2m.gz # 1p1mA.t2k-thin90.a2m with 360 sequences, total weight= 360 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.94604 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p1mA/info/1p1mA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p1mA/nostruct-align/1p1mA.t2k-thin90.a2m.gz, have 104997 columns in 427 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n9pA/nostruct-align/1n9pA.t2k-thin90.a2m.gz # 1n9pA.t2k-thin90.a2m with 37 sequences, total weight= 11.836 avg weight= 0.319891 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n9pA/info/1n9pA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n9pA/nostruct-align/1n9pA.t2k-thin90.a2m.gz, have 105194 columns in 428 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kqwA/nostruct-align/1kqwA.t2k-thin90.a2m.gz # 1kqwA.t2k-thin90.a2m with 128 sequences, total weight= 31.0218 avg weight= 0.242358 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kqwA/info/1kqwA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kqwA/nostruct-align/1kqwA.t2k-thin90.a2m.gz, have 105328 columns in 429 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tp6A/nostruct-align/1tp6A.t2k-thin90.a2m.gz # 1tp6A.t2k-thin90.a2m with 11 sequences, total weight= 6.14229 avg weight= 0.55839 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tp6A/info/1tp6A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tp6A/nostruct-align/1tp6A.t2k-thin90.a2m.gz, have 105454 columns in 430 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1erw/nostruct-align/1erw.t2k-thin90.a2m.gz # 1erw.t2k-thin90.a2m with 398 sequences, total weight= 321.879 avg weight= 0.808742 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30262 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1erw/info/1erw.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1erw/nostruct-align/1erw.t2k-thin90.a2m.gz, have 105559 columns in 431 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q0pA/nostruct-align/1q0pA.t2k-thin90.a2m.gz # 1q0pA.t2k-thin90.a2m with 353 sequences, total weight= 353 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24163 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q0pA/info/1q0pA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q0pA/nostruct-align/1q0pA.t2k-thin90.a2m.gz, have 105751 columns in 432 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dszA/nostruct-align/1dszA.t2k-thin90.a2m.gz # 1dszA.t2k-thin90.a2m with 366 sequences, total weight= 18.9413 avg weight= 0.0517521 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dszA/info/1dszA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dszA/nostruct-align/1dszA.t2k-thin90.a2m.gz, have 105826 columns in 433 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vziA/nostruct-align/1vziA.t2k-thin90.a2m.gz # 1vziA.t2k-thin90.a2m with 29 sequences, total weight= 11.1025 avg weight= 0.382844 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vziA/info/1vziA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vziA/nostruct-align/1vziA.t2k-thin90.a2m.gz, have 105951 columns in 434 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fxlA/nostruct-align/1fxlA.t2k-thin90.a2m.gz # 1fxlA.t2k-thin90.a2m with 865 sequences, total weight= 865 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20542 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fxlA/info/1fxlA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fxlA/nostruct-align/1fxlA.t2k-thin90.a2m.gz, have 106118 columns in 435 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gmxA/nostruct-align/1gmxA.t2k-thin90.a2m.gz # 1gmxA.t2k-thin90.a2m with 512 sequences, total weight= 512 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29058 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gmxA/info/1gmxA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gmxA/nostruct-align/1gmxA.t2k-thin90.a2m.gz, have 106226 columns in 436 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vybA/nostruct-align/1vybA.t2k-thin90.a2m.gz # 1vybA.t2k-thin90.a2m with 290 sequences, total weight= 290 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15835 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vybA/info/1vybA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vybA/nostruct-align/1vybA.t2k-thin90.a2m.gz, have 106462 columns in 437 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jetA/nostruct-align/1jetA.t2k-thin90.a2m.gz # 1jetA.t2k-thin90.a2m with 354 sequences, total weight= 354 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01924 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jetA/info/1jetA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jetA/nostruct-align/1jetA.t2k-thin90.a2m.gz, have 106979 columns in 438 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gbs/nostruct-align/1gbs.t2k-thin90.a2m.gz # 1gbs.t2k-thin90.a2m with 53 sequences, total weight= 39.9109 avg weight= 0.753035 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gbs/info/1gbs.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gbs/nostruct-align/1gbs.t2k-thin90.a2m.gz, have 107164 columns in 439 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oohA/nostruct-align/1oohA.t2k-thin90.a2m.gz # 1oohA.t2k-thin90.a2m with 96 sequences, total weight= 96 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0479 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oohA/info/1oohA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oohA/nostruct-align/1oohA.t2k-thin90.a2m.gz, have 107290 columns in 440 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pz4A/nostruct-align/1pz4A.t2k-thin90.a2m.gz # 1pz4A.t2k-thin90.a2m with 39 sequences, total weight= 21.806 avg weight= 0.559129 31 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pz4A/info/1pz4A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pz4A/nostruct-align/1pz4A.t2k-thin90.a2m.gz, have 107403 columns in 441 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d4oA/nostruct-align/1d4oA.t2k-thin90.a2m.gz # 1d4oA.t2k-thin90.a2m with 56 sequences, total weight= 4.25931 avg weight= 0.0760592 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d4oA/info/1d4oA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d4oA/nostruct-align/1d4oA.t2k-thin90.a2m.gz, have 107580 columns in 442 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qmvA/nostruct-align/1qmvA.t2k-thin90.a2m.gz # 1qmvA.t2k-thin90.a2m with 307 sequences, total weight= 134.019 avg weight= 0.436543 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30097 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qmvA/info/1qmvA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qmvA/nostruct-align/1qmvA.t2k-thin90.a2m.gz, have 107777 columns in 443 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qgiA/nostruct-align/1qgiA.t2k-thin90.a2m.gz # 1qgiA.t2k-thin90.a2m with 17 sequences, total weight= 10.9948 avg weight= 0.64675 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qgiA/info/1qgiA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qgiA/nostruct-align/1qgiA.t2k-thin90.a2m.gz, have 108036 columns in 444 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gk9A/nostruct-align/1gk9A.t2k-thin90.a2m.gz # 1gk9A.t2k-thin90.a2m with 69 sequences, total weight= 54.0654 avg weight= 0.783556 41 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gk9A/info/1gk9A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gk9A/nostruct-align/1gk9A.t2k-thin90.a2m.gz, have 108244 columns in 445 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dy5A/nostruct-align/1dy5A.t2k-thin90.a2m.gz # 1dy5A.t2k-thin90.a2m with 143 sequences, total weight= 21.1263 avg weight= 0.147736 41 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dy5A/info/1dy5A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dy5A/nostruct-align/1dy5A.t2k-thin90.a2m.gz, have 108368 columns in 446 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mdc/nostruct-align/1mdc.t2k-thin90.a2m.gz # 1mdc.t2k-thin90.a2m with 118 sequences, total weight= 27.0802 avg weight= 0.229494 37 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mdc/info/1mdc.stride-mixed.CB-burial-14-7 WARNING: skipping c, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1m/1mdc/nostruct-align/1mdc.t2k-thin90.a2m.gz, have 108499 columns in 447 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sfsA/nostruct-align/1sfsA.t2k-thin90.a2m.gz # 1sfsA.t2k-thin90.a2m with 4 sequences, total weight= 4 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2397 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sfsA/info/1sfsA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sfsA/nostruct-align/1sfsA.t2k-thin90.a2m.gz, have 108712 columns in 448 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oi0A/nostruct-align/1oi0A.t2k-thin90.a2m.gz # 1oi0A.t2k-thin90.a2m with 38 sequences, total weight= 31.7583 avg weight= 0.835745 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oi0A/info/1oi0A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oi0A/nostruct-align/1oi0A.t2k-thin90.a2m.gz, have 108820 columns in 449 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vhvA/nostruct-align/1vhvA.t2k-thin90.a2m.gz # 1vhvA.t2k-thin90.a2m with 243 sequences, total weight= 243 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24514 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vhvA/info/1vhvA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vhvA/nostruct-align/1vhvA.t2k-thin90.a2m.gz, have 109071 columns in 450 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jf3A/nostruct-align/1jf3A.t2k-thin90.a2m.gz # 1jf3A.t2k-thin90.a2m with 417 sequences, total weight= 162.12 avg weight= 0.388778 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3048 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jf3A/info/1jf3A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jf3A/nostruct-align/1jf3A.t2k-thin90.a2m.gz, have 109218 columns in 451 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mkkA/nostruct-align/1mkkA.t2k-thin90.a2m.gz # 1mkkA.t2k-thin90.a2m with 32 sequences, total weight= 14.3229 avg weight= 0.447592 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mkkA/info/1mkkA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mkkA/nostruct-align/1mkkA.t2k-thin90.a2m.gz, have 109311 columns in 452 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pyfA/nostruct-align/1pyfA.t2k-thin90.a2m.gz # 1pyfA.t2k-thin90.a2m with 1805 sequences, total weight= 1805 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22992 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pyfA/info/1pyfA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pyfA/nostruct-align/1pyfA.t2k-thin90.a2m.gz, have 109622 columns in 453 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n55A/nostruct-align/1n55A.t2k-thin90.a2m.gz # 1n55A.t2k-thin90.a2m with 211 sequences, total weight= 27.0207 avg weight= 0.12806 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n55A/info/1n55A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n55A/nostruct-align/1n55A.t2k-thin90.a2m.gz, have 109871 columns in 454 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1aba/nostruct-align/1aba.t2k-thin90.a2m.gz # 1aba.t2k-thin90.a2m with 129 sequences, total weight= 63.3897 avg weight= 0.491393 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1aba/info/1aba.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1a/1aba/nostruct-align/1aba.t2k-thin90.a2m.gz, have 109958 columns in 455 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1ql0A/nostruct-align/1ql0A.t2k-thin90.a2m.gz # 1ql0A.t2k-thin90.a2m with 66 sequences, total weight= 66 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20385 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1ql0A/info/1ql0A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1ql0A/nostruct-align/1ql0A.t2k-thin90.a2m.gz, have 110199 columns in 456 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gttA/nostruct-align/1gttA.t2k-thin90.a2m.gz # 1gttA.t2k-thin90.a2m with 253 sequences, total weight= 45.206 avg weight= 0.17868 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gttA/info/1gttA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gttA/nostruct-align/1gttA.t2k-thin90.a2m.gz, have 110620 columns in 457 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q9uA/nostruct-align/1q9uA.t2k-thin90.a2m.gz # 1q9uA.t2k-thin90.a2m with 42 sequences, total weight= 42 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22248 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q9uA/info/1q9uA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q9uA/nostruct-align/1q9uA.t2k-thin90.a2m.gz, have 110748 columns in 458 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j71A/nostruct-align/1j71A.t2k-thin90.a2m.gz # 1j71A.t2k-thin90.a2m with 300 sequences, total weight= 123.767 avg weight= 0.412558 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30281 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j71A/info/1j71A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j71A/nostruct-align/1j71A.t2k-thin90.a2m.gz, have 111082 columns in 459 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h32A/nostruct-align/1h32A.t2k-thin90.a2m.gz # 1h32A.t2k-thin90.a2m with 36 sequences, total weight= 36 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26174 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h32A/info/1h32A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h32A/nostruct-align/1h32A.t2k-thin90.a2m.gz, have 111343 columns in 460 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gwuA/nostruct-align/1gwuA.t2k-thin90.a2m.gz # 1gwuA.t2k-thin90.a2m with 366 sequences, total weight= 42.0511 avg weight= 0.114894 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gwuA/info/1gwuA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gwuA/nostruct-align/1gwuA.t2k-thin90.a2m.gz, have 111649 columns in 461 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q8fA/nostruct-align/1q8fA.t2k-thin90.a2m.gz # 1q8fA.t2k-thin90.a2m with 161 sequences, total weight= 144.092 avg weight= 0.894979 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30035 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q8fA/info/1q8fA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q8fA/nostruct-align/1q8fA.t2k-thin90.a2m.gz, have 111957 columns in 462 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3l/3lzt/nostruct-align/3lzt.t2k-thin90.a2m.gz # 3lzt.t2k-thin90.a2m with 87 sequences, total weight= 9.94429 avg weight= 0.114302 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3l/3lzt/info/3lzt.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/3l/3lzt/nostruct-align/3lzt.t2k-thin90.a2m.gz, have 112086 columns in 463 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kmvA/nostruct-align/1kmvA.t2k-thin90.a2m.gz # 1kmvA.t2k-thin90.a2m with 199 sequences, total weight= 100.229 avg weight= 0.503662 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30087 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kmvA/info/1kmvA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kmvA/nostruct-align/1kmvA.t2k-thin90.a2m.gz, have 112271 columns in 464 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nrjA/nostruct-align/1nrjA.t2k-thin90.a2m.gz # 1nrjA.t2k-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.564418 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nrjA/info/1nrjA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nrjA/nostruct-align/1nrjA.t2k-thin90.a2m.gz, have 112418 columns in 465 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oi6A/nostruct-align/1oi6A.t2k-thin90.a2m.gz # 1oi6A.t2k-thin90.a2m with 215 sequences, total weight= 29.3312 avg weight= 0.136424 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oi6A/info/1oi6A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oi6A/nostruct-align/1oi6A.t2k-thin90.a2m.gz, have 112620 columns in 466 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oq1A/nostruct-align/1oq1A.t2k-thin90.a2m.gz # 1oq1A.t2k-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.61905 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oq1A/info/1oq1A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oq1A/nostruct-align/1oq1A.t2k-thin90.a2m.gz, have 112843 columns in 467 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qstA/nostruct-align/1qstA.t2k-thin90.a2m.gz # 1qstA.t2k-thin90.a2m with 286 sequences, total weight= 286 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.983777 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qstA/info/1qstA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qstA/nostruct-align/1qstA.t2k-thin90.a2m.gz, have 113003 columns in 468 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nxmA/nostruct-align/1nxmA.t2k-thin90.a2m.gz # 1nxmA.t2k-thin90.a2m with 178 sequences, total weight= 20.597 avg weight= 0.115714 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nxmA/info/1nxmA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nxmA/nostruct-align/1nxmA.t2k-thin90.a2m.gz, have 113197 columns in 469 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s9rA/nostruct-align/1s9rA.t2k-thin90.a2m.gz # 1s9rA.t2k-thin90.a2m with 134 sequences, total weight= 118.004 avg weight= 0.880623 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s9rA/info/1s9rA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s9rA/nostruct-align/1s9rA.t2k-thin90.a2m.gz, have 113606 columns in 470 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k5nB/nostruct-align/1k5nB.t2k-thin90.a2m.gz # 1k5nB.t2k-thin90.a2m with 886 sequences, total weight= 886 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26285 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k5nB/info/1k5nB.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k5nB/nostruct-align/1k5nB.t2k-thin90.a2m.gz, have 113706 columns in 471 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eaqA/nostruct-align/1eaqA.t2k-thin90.a2m.gz # 1eaqA.t2k-thin90.a2m with 16 sequences, total weight= 3.38193 avg weight= 0.211371 14 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eaqA/info/1eaqA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1eaqA/nostruct-align/1eaqA.t2k-thin90.a2m.gz, have 113830 columns in 472 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1ls1A/nostruct-align/1ls1A.t2k-thin90.a2m.gz # 1ls1A.t2k-thin90.a2m with 622 sequences, total weight= 622 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18197 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1ls1A/info/1ls1A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1ls1A/nostruct-align/1ls1A.t2k-thin90.a2m.gz, have 114119 columns in 473 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hp1A/nostruct-align/1hp1A.t2k-thin90.a2m.gz # 1hp1A.t2k-thin90.a2m with 219 sequences, total weight= 219 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20167 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hp1A/info/1hp1A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hp1A/nostruct-align/1hp1A.t2k-thin90.a2m.gz, have 114635 columns in 474 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3s/3seb/nostruct-align/3seb.t2k-thin90.a2m.gz # 3seb.t2k-thin90.a2m with 53 sequences, total weight= 52.0103 avg weight= 0.981326 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3s/3seb/info/3seb.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/3s/3seb/nostruct-align/3seb.t2k-thin90.a2m.gz, have 114873 columns in 475 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p5vB/nostruct-align/1p5vB.t2k-thin90.a2m.gz # 1p5vB.t2k-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.614906 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p5vB/info/1p5vB.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p5vB/nostruct-align/1p5vB.t2k-thin90.a2m.gz, have 115009 columns in 476 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nq7A/nostruct-align/1nq7A.t2k-thin90.a2m.gz # 1nq7A.t2k-thin90.a2m with 245 sequences, total weight= 245 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16993 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nq7A/info/1nq7A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nq7A/nostruct-align/1nq7A.t2k-thin90.a2m.gz, have 115253 columns in 477 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1is3A/nostruct-align/1is3A.t2k-thin90.a2m.gz # 1is3A.t2k-thin90.a2m with 144 sequences, total weight= 65.5589 avg weight= 0.45527 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30029 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1is3A/info/1is3A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1is3A/nostruct-align/1is3A.t2k-thin90.a2m.gz, have 115387 columns in 478 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nkr/nostruct-align/1nkr.t2k-thin90.a2m.gz # 1nkr.t2k-thin90.a2m with 213 sequences, total weight= 213 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10424 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nkr/info/1nkr.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nkr/nostruct-align/1nkr.t2k-thin90.a2m.gz, have 115582 columns in 479 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vh4A/nostruct-align/1vh4A.t2k-thin90.a2m.gz # 1vh4A.t2k-thin90.a2m with 192 sequences, total weight= 192 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24716 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vh4A/info/1vh4A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vh4A/nostruct-align/1vh4A.t2k-thin90.a2m.gz, have 115992 columns in 480 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o97C/nostruct-align/1o97C.t2k-thin90.a2m.gz # 1o97C.t2k-thin90.a2m with 135 sequences, total weight= 61.4533 avg weight= 0.45521 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o97C/info/1o97C.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o97C/nostruct-align/1o97C.t2k-thin90.a2m.gz, have 116243 columns in 481 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qreA/nostruct-align/1qreA.t2k-thin90.a2m.gz # 1qreA.t2k-thin90.a2m with 238 sequences, total weight= 238 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15538 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qreA/info/1qreA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qreA/nostruct-align/1qreA.t2k-thin90.a2m.gz, have 116453 columns in 482 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ow4A/nostruct-align/1ow4A.t2k-thin90.a2m.gz # 1ow4A.t2k-thin90.a2m with 51 sequences, total weight= 51 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07107 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ow4A/info/1ow4A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ow4A/nostruct-align/1ow4A.t2k-thin90.a2m.gz, have 116573 columns in 483 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gqiA/nostruct-align/1gqiA.t2k-thin90.a2m.gz # 1gqiA.t2k-thin90.a2m with 17 sequences, total weight= 5.42997 avg weight= 0.31941 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gqiA/info/1gqiA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gqiA/nostruct-align/1gqiA.t2k-thin90.a2m.gz, have 117281 columns in 484 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mw9X/nostruct-align/1mw9X.t2k-thin90.a2m.gz # 1mw9X.t2k-thin90.a2m with 277 sequences, total weight= 69.9931 avg weight= 0.252683 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30141 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mw9X/info/1mw9X.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mw9X/nostruct-align/1mw9X.t2k-thin90.a2m.gz, have 117837 columns in 485 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rwzA/nostruct-align/1rwzA.t2k-thin90.a2m.gz # 1rwzA.t2k-thin90.a2m with 69 sequences, total weight= 36.8244 avg weight= 0.533686 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rwzA/info/1rwzA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rwzA/nostruct-align/1rwzA.t2k-thin90.a2m.gz, have 118081 columns in 486 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gmiA/nostruct-align/1gmiA.t2k-thin90.a2m.gz # 1gmiA.t2k-thin90.a2m with 176 sequences, total weight= 176 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15695 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gmiA/info/1gmiA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gmiA/nostruct-align/1gmiA.t2k-thin90.a2m.gz, have 118216 columns in 487 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n57A/nostruct-align/1n57A.t2k-thin90.a2m.gz # 1n57A.t2k-thin90.a2m with 76 sequences, total weight= 50.6808 avg weight= 0.666853 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n57A/info/1n57A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n57A/nostruct-align/1n57A.t2k-thin90.a2m.gz, have 118495 columns in 488 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h12A/nostruct-align/1h12A.t2k-thin90.a2m.gz # 1h12A.t2k-thin90.a2m with 34 sequences, total weight= 34 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20954 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h12A/info/1h12A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h12A/nostruct-align/1h12A.t2k-thin90.a2m.gz, have 118899 columns in 489 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kqfC/nostruct-align/1kqfC.t2k-thin90.a2m.gz # 1kqfC.t2k-thin90.a2m with 78 sequences, total weight= 78 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18823 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kqfC/info/1kqfC.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kqfC/nostruct-align/1kqfC.t2k-thin90.a2m.gz, have 119115 columns in 490 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nykA/nostruct-align/1nykA.t2k-thin90.a2m.gz # 1nykA.t2k-thin90.a2m with 279 sequences, total weight= 279 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27025 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nykA/info/1nykA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nykA/nostruct-align/1nykA.t2k-thin90.a2m.gz, have 119271 columns in 491 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t4bA/nostruct-align/1t4bA.t2k-thin90.a2m.gz # 1t4bA.t2k-thin90.a2m with 184 sequences, total weight= 27.4248 avg weight= 0.149048 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t4bA/info/1t4bA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t4bA/nostruct-align/1t4bA.t2k-thin90.a2m.gz, have 119638 columns in 492 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mj5A/nostruct-align/1mj5A.t2k-thin90.a2m.gz # 1mj5A.t2k-thin90.a2m with 783 sequences, total weight= 783 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.942856 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mj5A/info/1mj5A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mj5A/nostruct-align/1mj5A.t2k-thin90.a2m.gz, have 119935 columns in 493 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fsgA/nostruct-align/1fsgA.t2k-thin90.a2m.gz # 1fsgA.t2k-thin90.a2m with 294 sequences, total weight= 178.604 avg weight= 0.607497 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fsgA/info/1fsgA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fsgA/nostruct-align/1fsgA.t2k-thin90.a2m.gz, have 120168 columns in 494 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uuqA/nostruct-align/1uuqA.t2k-thin90.a2m.gz # 1uuqA.t2k-thin90.a2m with 64 sequences, total weight= 64 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21027 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uuqA/info/1uuqA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uuqA/nostruct-align/1uuqA.t2k-thin90.a2m.gz, have 120578 columns in 495 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kshB/nostruct-align/1kshB.t2k-thin90.a2m.gz # 1kshB.t2k-thin90.a2m with 15 sequences, total weight= 6.90416 avg weight= 0.460277 19 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kshB/info/1kshB.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kshB/nostruct-align/1kshB.t2k-thin90.a2m.gz, have 120720 columns in 496 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1od6A/nostruct-align/1od6A.t2k-thin90.a2m.gz # 1od6A.t2k-thin90.a2m with 190 sequences, total weight= 190 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17838 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1od6A/info/1od6A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1od6A/nostruct-align/1od6A.t2k-thin90.a2m.gz, have 120875 columns in 497 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hxiA/nostruct-align/1hxiA.t2k-thin90.a2m.gz # 1hxiA.t2k-thin90.a2m with 449 sequences, total weight= 449 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12906 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hxiA/info/1hxiA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hxiA/nostruct-align/1hxiA.t2k-thin90.a2m.gz, have 120987 columns in 498 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a4iA/nostruct-align/1a4iA.t2k-thin90.a2m.gz # 1a4iA.t2k-thin90.a2m with 182 sequences, total weight= 21.3241 avg weight= 0.117166 43 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a4iA/info/1a4iA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1a/1a4iA/nostruct-align/1a4iA.t2k-thin90.a2m.gz, have 121272 columns in 499 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hq1A/nostruct-align/1hq1A.t2k-thin90.a2m.gz # 1hq1A.t2k-thin90.a2m with 147 sequences, total weight= 12.9707 avg weight= 0.0882362 37 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hq1A/info/1hq1A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hq1A/nostruct-align/1hq1A.t2k-thin90.a2m.gz, have 121348 columns in 500 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j31A/nostruct-align/1j31A.t2k-thin90.a2m.gz # 1j31A.t2k-thin90.a2m with 597 sequences, total weight= 597 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21999 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j31A/info/1j31A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j31A/nostruct-align/1j31A.t2k-thin90.a2m.gz, have 121610 columns in 501 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c5eA/nostruct-align/1c5eA.t2k-thin90.a2m.gz # 1c5eA.t2k-thin90.a2m with 5 sequences, total weight= 3.27695 avg weight= 0.65539 11 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c5eA/info/1c5eA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1c/1c5eA/nostruct-align/1c5eA.t2k-thin90.a2m.gz, have 121705 columns in 502 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r6dA/nostruct-align/1r6dA.t2k-thin90.a2m.gz # 1r6dA.t2k-thin90.a2m with 2021 sequences, total weight= 2021 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03783 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r6dA/info/1r6dA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r6dA/nostruct-align/1r6dA.t2k-thin90.a2m.gz, have 122027 columns in 503 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p3dA/nostruct-align/1p3dA.t2k-thin90.a2m.gz # 1p3dA.t2k-thin90.a2m with 543 sequences, total weight= 543 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13819 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p3dA/info/1p3dA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p3dA/nostruct-align/1p3dA.t2k-thin90.a2m.gz, have 122490 columns in 504 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d0qA/nostruct-align/1d0qA.t2k-thin90.a2m.gz # 1d0qA.t2k-thin90.a2m with 134 sequences, total weight= 24.6137 avg weight= 0.183685 43 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d0qA/info/1d0qA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d0qA/nostruct-align/1d0qA.t2k-thin90.a2m.gz, have 122592 columns in 505 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2s/2sak/nostruct-align/2sak.t2k-thin90.a2m.gz # 2sak.t2k-thin90.a2m with 4 sequences, total weight= 4 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09305 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2s/2sak/info/2sak.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/2s/2sak/nostruct-align/2sak.t2k-thin90.a2m.gz, have 122713 columns in 506 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1msk/nostruct-align/1msk.t2k-thin90.a2m.gz # 1msk.t2k-thin90.a2m with 72 sequences, total weight= 16.9298 avg weight= 0.235136 31 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1msk/info/1msk.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1msk/nostruct-align/1msk.t2k-thin90.a2m.gz, have 123040 columns in 507 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1npyA/nostruct-align/1npyA.t2k-thin90.a2m.gz # 1npyA.t2k-thin90.a2m with 206 sequences, total weight= 70.9251 avg weight= 0.344296 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30038 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1npyA/info/1npyA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1npyA/nostruct-align/1npyA.t2k-thin90.a2m.gz, have 123309 columns in 508 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dkiA/nostruct-align/1dkiA.t2k-thin90.a2m.gz # 1dkiA.t2k-thin90.a2m with 6 sequences, total weight= 6 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11248 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dkiA/info/1dkiA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dkiA/nostruct-align/1dkiA.t2k-thin90.a2m.gz, have 123612 columns in 509 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fs7A/nostruct-align/1fs7A.t2k-thin90.a2m.gz # 1fs7A.t2k-thin90.a2m with 20 sequences, total weight= 11.026 avg weight= 0.5513 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fs7A/info/1fs7A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fs7A/nostruct-align/1fs7A.t2k-thin90.a2m.gz, have 124083 columns in 510 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eazA/nostruct-align/1eazA.t2k-thin90.a2m.gz # 1eazA.t2k-thin90.a2m with 310 sequences, total weight= 310 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06336 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eazA/info/1eazA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1eazA/nostruct-align/1eazA.t2k-thin90.a2m.gz, have 124186 columns in 511 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1ds1A/nostruct-align/1ds1A.t2k-thin90.a2m.gz # 1ds1A.t2k-thin90.a2m with 43 sequences, total weight= 43 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0359 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1ds1A/info/1ds1A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1ds1A/nostruct-align/1ds1A.t2k-thin90.a2m.gz, have 124509 columns in 512 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g8qA/nostruct-align/1g8qA.t2k-thin90.a2m.gz # 1g8qA.t2k-thin90.a2m with 22 sequences, total weight= 15.5542 avg weight= 0.707011 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g8qA/info/1g8qA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g8qA/nostruct-align/1g8qA.t2k-thin90.a2m.gz, have 124599 columns in 513 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c7kA/nostruct-align/1c7kA.t2k-thin90.a2m.gz # 1c7kA.t2k-thin90.a2m with 7 sequences, total weight= 2.90722 avg weight= 0.415317 12 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c7kA/info/1c7kA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1c/1c7kA/nostruct-align/1c7kA.t2k-thin90.a2m.gz, have 124731 columns in 514 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mwpA/nostruct-align/1mwpA.t2k-thin90.a2m.gz # 1mwpA.t2k-thin90.a2m with 10 sequences, total weight= 4.29524 avg weight= 0.429524 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mwpA/info/1mwpA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mwpA/nostruct-align/1mwpA.t2k-thin90.a2m.gz, have 124827 columns in 515 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pjxA/nostruct-align/1pjxA.t2k-thin90.a2m.gz # 1pjxA.t2k-thin90.a2m with 206 sequences, total weight= 206 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15455 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pjxA/info/1pjxA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pjxA/nostruct-align/1pjxA.t2k-thin90.a2m.gz, have 125141 columns in 516 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kicA/nostruct-align/1kicA.t2k-thin90.a2m.gz # 1kicA.t2k-thin90.a2m with 117 sequences, total weight= 108.151 avg weight= 0.924365 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kicA/info/1kicA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kicA/nostruct-align/1kicA.t2k-thin90.a2m.gz, have 125458 columns in 517 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1npsA/nostruct-align/1npsA.t2k-thin90.a2m.gz # 1npsA.t2k-thin90.a2m with 101 sequences, total weight= 62.1706 avg weight= 0.61555 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1npsA/info/1npsA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1npsA/nostruct-align/1npsA.t2k-thin90.a2m.gz, have 125546 columns in 518 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p1xA/nostruct-align/1p1xA.t2k-thin90.a2m.gz # 1p1xA.t2k-thin90.a2m with 123 sequences, total weight= 23.7406 avg weight= 0.193013 42 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p1xA/info/1p1xA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p1xA/nostruct-align/1p1xA.t2k-thin90.a2m.gz, have 125796 columns in 519 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jndA/nostruct-align/1jndA.t2k-thin90.a2m.gz # 1jndA.t2k-thin90.a2m with 261 sequences, total weight= 261 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24002 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jndA/info/1jndA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jndA/nostruct-align/1jndA.t2k-thin90.a2m.gz, have 126196 columns in 520 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kw4A/nostruct-align/1kw4A.t2k-thin90.a2m.gz # 1kw4A.t2k-thin90.a2m with 86 sequences, total weight= 54.2964 avg weight= 0.631353 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kw4A/info/1kw4A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kw4A/nostruct-align/1kw4A.t2k-thin90.a2m.gz, have 126266 columns in 521 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mj4A/nostruct-align/1mj4A.t2k-thin90.a2m.gz # 1mj4A.t2k-thin90.a2m with 171 sequences, total weight= 41.6491 avg weight= 0.243562 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mj4A/info/1mj4A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mj4A/nostruct-align/1mj4A.t2k-thin90.a2m.gz, have 126345 columns in 522 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m4jA/nostruct-align/1m4jA.t2k-thin90.a2m.gz # 1m4jA.t2k-thin90.a2m with 93 sequences, total weight= 74.5492 avg weight= 0.801605 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m4jA/info/1m4jA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m4jA/nostruct-align/1m4jA.t2k-thin90.a2m.gz, have 126478 columns in 523 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rwhA/nostruct-align/1rwhA.t2k-thin90.a2m.gz # 1rwhA.t2k-thin90.a2m with 30 sequences, total weight= 30 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27419 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rwhA/info/1rwhA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rwhA/nostruct-align/1rwhA.t2k-thin90.a2m.gz, have 127232 columns in 524 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j7xA/nostruct-align/1j7xA.t2k-thin90.a2m.gz # 1j7xA.t2k-thin90.a2m with 147 sequences, total weight= 52.4339 avg weight= 0.356693 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j7xA/info/1j7xA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j7xA/nostruct-align/1j7xA.t2k-thin90.a2m.gz, have 127534 columns in 525 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mnnA/nostruct-align/1mnnA.t2k-thin90.a2m.gz # 1mnnA.t2k-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.768833 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mnnA/info/1mnnA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mnnA/nostruct-align/1mnnA.t2k-thin90.a2m.gz, have 127824 columns in 526 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mdoA/nostruct-align/1mdoA.t2k-thin90.a2m.gz # 1mdoA.t2k-thin90.a2m with 783 sequences, total weight= 783 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.991609 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mdoA/info/1mdoA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mdoA/nostruct-align/1mdoA.t2k-thin90.a2m.gz, have 128189 columns in 527 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r9lA/nostruct-align/1r9lA.t2k-thin90.a2m.gz # 1r9lA.t2k-thin90.a2m with 119 sequences, total weight= 62.97 avg weight= 0.52916 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r9lA/info/1r9lA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r9lA/nostruct-align/1r9lA.t2k-thin90.a2m.gz, have 128498 columns in 528 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f1mA/nostruct-align/1f1mA.t2k-thin90.a2m.gz # 1f1mA.t2k-thin90.a2m with 114 sequences, total weight= 6.01726 avg weight= 0.052783 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f1mA/info/1f1mA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f1mA/nostruct-align/1f1mA.t2k-thin90.a2m.gz, have 128660 columns in 529 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vkkA/nostruct-align/1vkkA.t2k-thin90.a2m.gz # 1vkkA.t2k-thin90.a2m with 155 sequences, total weight= 64.3158 avg weight= 0.414941 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vkkA/info/1vkkA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vkkA/nostruct-align/1vkkA.t2k-thin90.a2m.gz, have 128797 columns in 530 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pp0A/nostruct-align/1pp0A.t2k-thin90.a2m.gz # 1pp0A.t2k-thin90.a2m with 9 sequences, total weight= 6.85402 avg weight= 0.761558 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pp0A/info/1pp0A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pp0A/nostruct-align/1pp0A.t2k-thin90.a2m.gz, have 128988 columns in 531 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r2qA/nostruct-align/1r2qA.t2k-thin90.a2m.gz # 1r2qA.t2k-thin90.a2m with 1136 sequences, total weight= 1136 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22007 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r2qA/info/1r2qA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r2qA/nostruct-align/1r2qA.t2k-thin90.a2m.gz, have 129158 columns in 532 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h5qA/nostruct-align/1h5qA.t2k-thin90.a2m.gz # 1h5qA.t2k-thin90.a2m with 1530 sequences, total weight= 1530 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20779 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h5qA/info/1h5qA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h5qA/nostruct-align/1h5qA.t2k-thin90.a2m.gz, have 129418 columns in 533 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kgsA/nostruct-align/1kgsA.t2k-thin90.a2m.gz # 1kgsA.t2k-thin90.a2m with 1645 sequences, total weight= 1645 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19384 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kgsA/info/1kgsA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kgsA/nostruct-align/1kgsA.t2k-thin90.a2m.gz, have 129637 columns in 534 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rwiA/nostruct-align/1rwiA.t2k-thin90.a2m.gz # 1rwiA.t2k-thin90.a2m with 630 sequences, total weight= 630 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.889204 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rwiA/info/1rwiA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rwiA/nostruct-align/1rwiA.t2k-thin90.a2m.gz, have 129893 columns in 535 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tyv/nostruct-align/1tyv.t2k-thin90.a2m.gz # 1tyv.t2k-thin90.a2m with 3 sequences, total weight= 2.72774 avg weight= 0.909247 8 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tyv/info/1tyv.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tyv/nostruct-align/1tyv.t2k-thin90.a2m.gz, have 130435 columns in 536 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tqhA/nostruct-align/1tqhA.t2k-thin90.a2m.gz # 1tqhA.t2k-thin90.a2m with 703 sequences, total weight= 703 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.882692 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tqhA/info/1tqhA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tqhA/nostruct-align/1tqhA.t2k-thin90.a2m.gz, have 130677 columns in 537 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54H/nostruct-align/1v54H.t2k-thin90.a2m.gz # 1v54H.t2k-thin90.a2m with 24 sequences, total weight= 10.8833 avg weight= 0.453472 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54H/info/1v54H.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v54H/nostruct-align/1v54H.t2k-thin90.a2m.gz, have 130756 columns in 538 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u14A/nostruct-align/1u14A.t2k-thin90.a2m.gz # 1u14A.t2k-thin90.a2m with 29 sequences, total weight= 13.5163 avg weight= 0.466078 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u14A/info/1u14A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1u14A/nostruct-align/1u14A.t2k-thin90.a2m.gz, have 130925 columns in 539 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1chd/nostruct-align/1chd.t2k-thin90.a2m.gz # 1chd.t2k-thin90.a2m with 146 sequences, total weight= 28.0285 avg weight= 0.191976 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1chd/info/1chd.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1c/1chd/nostruct-align/1chd.t2k-thin90.a2m.gz, have 131123 columns in 540 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fdr/nostruct-align/1fdr.t2k-thin90.a2m.gz # 1fdr.t2k-thin90.a2m with 194 sequences, total weight= 194 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19366 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fdr/info/1fdr.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fdr/nostruct-align/1fdr.t2k-thin90.a2m.gz, have 131367 columns in 541 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a3c/nostruct-align/1a3c.t2k-thin90.a2m.gz # 1a3c.t2k-thin90.a2m with 206 sequences, total weight= 206 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22554 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a3c/info/1a3c.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1a/1a3c/nostruct-align/1a3c.t2k-thin90.a2m.gz, have 131533 columns in 542 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ox0A/nostruct-align/1ox0A.t2k-thin90.a2m.gz # 1ox0A.t2k-thin90.a2m with 1006 sequences, total weight= 510.496 avg weight= 0.507451 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31047 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ox0A/info/1ox0A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ox0A/nostruct-align/1ox0A.t2k-thin90.a2m.gz, have 131947 columns in 543 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bx4A/nostruct-align/1bx4A.t2k-thin90.a2m.gz # 1bx4A.t2k-thin90.a2m with 242 sequences, total weight= 242 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09961 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bx4A/info/1bx4A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bx4A/nostruct-align/1bx4A.t2k-thin90.a2m.gz, have 132289 columns in 544 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2t/2tpsA/nostruct-align/2tpsA.t2k-thin90.a2m.gz # 2tpsA.t2k-thin90.a2m with 231 sequences, total weight= 231 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02664 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2t/2tpsA/info/2tpsA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/2t/2tpsA/nostruct-align/2tpsA.t2k-thin90.a2m.gz, have 132515 columns in 545 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dbwA/nostruct-align/1dbwA.t2k-thin90.a2m.gz # 1dbwA.t2k-thin90.a2m with 1465 sequences, total weight= 288.506 avg weight= 0.196932 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3185 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dbwA/info/1dbwA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dbwA/nostruct-align/1dbwA.t2k-thin90.a2m.gz, have 132638 columns in 546 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jkxA/nostruct-align/1jkxA.t2k-thin90.a2m.gz # 1jkxA.t2k-thin90.a2m with 392 sequences, total weight= 136.975 avg weight= 0.349426 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30192 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jkxA/info/1jkxA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jkxA/nostruct-align/1jkxA.t2k-thin90.a2m.gz, have 132847 columns in 547 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ia8A/nostruct-align/1ia8A.t2k-thin90.a2m.gz # 1ia8A.t2k-thin90.a2m with 3254 sequences, total weight= 3254 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17126 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ia8A/info/1ia8A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ia8A/nostruct-align/1ia8A.t2k-thin90.a2m.gz, have 133119 columns in 548 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1opd/nostruct-align/1opd.t2k-thin90.a2m.gz # 1opd.t2k-thin90.a2m with 153 sequences, total weight= 20.6805 avg weight= 0.135167 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1opd/info/1opd.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1opd/nostruct-align/1opd.t2k-thin90.a2m.gz, have 133204 columns in 549 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vl7A/nostruct-align/1vl7A.t2k-thin90.a2m.gz # 1vl7A.t2k-thin90.a2m with 46 sequences, total weight= 25.3178 avg weight= 0.550388 37 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vl7A/info/1vl7A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vl7A/nostruct-align/1vl7A.t2k-thin90.a2m.gz, have 133339 columns in 550 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qkrA/nostruct-align/1qkrA.t2k-thin90.a2m.gz # 1qkrA.t2k-thin90.a2m with 20 sequences, total weight= 10.384 avg weight= 0.519202 20 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qkrA/info/1qkrA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qkrA/nostruct-align/1qkrA.t2k-thin90.a2m.gz, have 133520 columns in 551 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ui0A/nostruct-align/1ui0A.t2k-thin90.a2m.gz # 1ui0A.t2k-thin90.a2m with 140 sequences, total weight= 97.4108 avg weight= 0.695791 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ui0A/info/1ui0A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ui0A/nostruct-align/1ui0A.t2k-thin90.a2m.gz, have 133712 columns in 552 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m45A/nostruct-align/1m45A.t2k-thin90.a2m.gz # 1m45A.t2k-thin90.a2m with 730 sequences, total weight= 730 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20706 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m45A/info/1m45A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m45A/nostruct-align/1m45A.t2k-thin90.a2m.gz, have 133854 columns in 553 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mqoA/nostruct-align/1mqoA.t2k-thin90.a2m.gz # 1mqoA.t2k-thin90.a2m with 518 sequences, total weight= 518 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01621 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mqoA/info/1mqoA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mqoA/nostruct-align/1mqoA.t2k-thin90.a2m.gz, have 134075 columns in 554 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k5nA/nostruct-align/1k5nA.t2k-thin90.a2m.gz # 1k5nA.t2k-thin90.a2m with 2229 sequences, total weight= 2229 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21468 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k5nA/info/1k5nA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k5nA/nostruct-align/1k5nA.t2k-thin90.a2m.gz, have 134351 columns in 555 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nxuA/nostruct-align/1nxuA.t2k-thin90.a2m.gz # 1nxuA.t2k-thin90.a2m with 50 sequences, total weight= 21.0935 avg weight= 0.42187 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nxuA/info/1nxuA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nxuA/nostruct-align/1nxuA.t2k-thin90.a2m.gz, have 134683 columns in 556 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ew0A/nostruct-align/1ew0A.t2k-thin90.a2m.gz # 1ew0A.t2k-thin90.a2m with 341 sequences, total weight= 341 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.978087 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ew0A/info/1ew0A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ew0A/nostruct-align/1ew0A.t2k-thin90.a2m.gz, have 134813 columns in 557 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lf7A/nostruct-align/1lf7A.t2k-thin90.a2m.gz # 1lf7A.t2k-thin90.a2m with 88 sequences, total weight= 78.8609 avg weight= 0.896146 43 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lf7A/info/1lf7A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lf7A/nostruct-align/1lf7A.t2k-thin90.a2m.gz, have 134977 columns in 558 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e30A/nostruct-align/1e30A.t2k-thin90.a2m.gz # 1e30A.t2k-thin90.a2m with 57 sequences, total weight= 46.106 avg weight= 0.808877 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e30A/info/1e30A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e30A/nostruct-align/1e30A.t2k-thin90.a2m.gz, have 135130 columns in 559 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rttA/nostruct-align/1rttA.t2k-thin90.a2m.gz # 1rttA.t2k-thin90.a2m with 355 sequences, total weight= 355 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14206 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rttA/info/1rttA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rttA/nostruct-align/1rttA.t2k-thin90.a2m.gz, have 135304 columns in 560 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cnv/nostruct-align/1cnv.t2k-thin90.a2m.gz # 1cnv.t2k-thin90.a2m with 100 sequences, total weight= 34.4733 avg weight= 0.344733 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cnv/info/1cnv.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cnv/nostruct-align/1cnv.t2k-thin90.a2m.gz, have 135587 columns in 561 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tovA/nostruct-align/1tovA.t2k-thin90.a2m.gz # 1tovA.t2k-thin90.a2m with 142 sequences, total weight= 36.3167 avg weight= 0.255751 43 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tovA/info/1tovA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tovA/nostruct-align/1tovA.t2k-thin90.a2m.gz, have 135684 columns in 562 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dqeA/nostruct-align/1dqeA.t2k-thin90.a2m.gz # 1dqeA.t2k-thin90.a2m with 55 sequences, total weight= 31.9137 avg weight= 0.58025 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dqeA/info/1dqeA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dqeA/nostruct-align/1dqeA.t2k-thin90.a2m.gz, have 135821 columns in 563 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s7iA/nostruct-align/1s7iA.t2k-thin90.a2m.gz # 1s7iA.t2k-thin90.a2m with 66 sequences, total weight= 27.7813 avg weight= 0.420928 41 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s7iA/info/1s7iA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s7iA/nostruct-align/1s7iA.t2k-thin90.a2m.gz, have 135945 columns in 564 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dypA/nostruct-align/1dypA.t2k-thin90.a2m.gz # 1dypA.t2k-thin90.a2m with 149 sequences, total weight= 149 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14052 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dypA/info/1dypA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dypA/nostruct-align/1dypA.t2k-thin90.a2m.gz, have 136216 columns in 565 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fcyA/nostruct-align/1fcyA.t2k-thin90.a2m.gz # 1fcyA.t2k-thin90.a2m with 243 sequences, total weight= 243 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15424 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fcyA/info/1fcyA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fcyA/nostruct-align/1fcyA.t2k-thin90.a2m.gz, have 136452 columns in 566 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t5bA/nostruct-align/1t5bA.t2k-thin90.a2m.gz # 1t5bA.t2k-thin90.a2m with 346 sequences, total weight= 346 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06078 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t5bA/info/1t5bA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t5bA/nostruct-align/1t5bA.t2k-thin90.a2m.gz, have 136651 columns in 567 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ej0A/nostruct-align/1ej0A.t2k-thin90.a2m.gz # 1ej0A.t2k-thin90.a2m with 288 sequences, total weight= 288 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23891 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ej0A/info/1ej0A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ej0A/nostruct-align/1ej0A.t2k-thin90.a2m.gz, have 136831 columns in 568 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ifrA/nostruct-align/1ifrA.t2k-thin90.a2m.gz # 1ifrA.t2k-thin90.a2m with 70 sequences, total weight= 24.8172 avg weight= 0.354531 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ifrA/info/1ifrA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ifrA/nostruct-align/1ifrA.t2k-thin90.a2m.gz, have 136944 columns in 569 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u55A/nostruct-align/1u55A.t2k-thin90.a2m.gz # 1u55A.t2k-thin90.a2m with 28 sequences, total weight= 28 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25658 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u55A/info/1u55A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1u55A/nostruct-align/1u55A.t2k-thin90.a2m.gz, have 137132 columns in 570 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gheA/nostruct-align/1gheA.t2k-thin90.a2m.gz # 1gheA.t2k-thin90.a2m with 540 sequences, total weight= 540 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.891514 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gheA/info/1gheA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gheA/nostruct-align/1gheA.t2k-thin90.a2m.gz, have 137302 columns in 571 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kq6A/nostruct-align/1kq6A.t2k-thin90.a2m.gz # 1kq6A.t2k-thin90.a2m with 47 sequences, total weight= 47 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20501 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kq6A/info/1kq6A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kq6A/nostruct-align/1kq6A.t2k-thin90.a2m.gz, have 137442 columns in 572 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r6xA/nostruct-align/1r6xA.t2k-thin90.a2m.gz # 1r6xA.t2k-thin90.a2m with 75 sequences, total weight= 21.3554 avg weight= 0.284739 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r6xA/info/1r6xA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r6xA/nostruct-align/1r6xA.t2k-thin90.a2m.gz, have 137828 columns in 573 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l6rA/nostruct-align/1l6rA.t2k-thin90.a2m.gz # 1l6rA.t2k-thin90.a2m with 323 sequences, total weight= 323 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10105 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l6rA/info/1l6rA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1l6rA/nostruct-align/1l6rA.t2k-thin90.a2m.gz, have 138053 columns in 574 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qtnA/nostruct-align/1qtnA.t2k-thin90.a2m.gz # 1qtnA.t2k-thin90.a2m with 98 sequences, total weight= 26.7483 avg weight= 0.272942 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qtnA/info/1qtnA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qtnA/nostruct-align/1qtnA.t2k-thin90.a2m.gz, have 138205 columns in 575 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3s/3sdhA/nostruct-align/3sdhA.t2k-thin90.a2m.gz # 3sdhA.t2k-thin90.a2m with 348 sequences, total weight= 153.003 avg weight= 0.439662 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30355 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3s/3sdhA/info/3sdhA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/3s/3sdhA/nostruct-align/3sdhA.t2k-thin90.a2m.gz, have 138350 columns in 576 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e1hA/nostruct-align/1e1hA.t2k-thin90.a2m.gz # 1e1hA.t2k-thin90.a2m with 18 sequences, total weight= 7.49307 avg weight= 0.416281 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e1hA/info/1e1hA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e1hA/nostruct-align/1e1hA.t2k-thin90.a2m.gz, have 138585 columns in 577 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nepA/nostruct-align/1nepA.t2k-thin90.a2m.gz # 1nepA.t2k-thin90.a2m with 38 sequences, total weight= 25.521 avg weight= 0.671606 37 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nepA/info/1nepA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nepA/nostruct-align/1nepA.t2k-thin90.a2m.gz, have 138715 columns in 578 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s2wA/nostruct-align/1s2wA.t2k-thin90.a2m.gz # 1s2wA.t2k-thin90.a2m with 203 sequences, total weight= 50.7036 avg weight= 0.249771 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s2wA/info/1s2wA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s2wA/nostruct-align/1s2wA.t2k-thin90.a2m.gz, have 138973 columns in 579 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u60A/nostruct-align/1u60A.t2k-thin90.a2m.gz # 1u60A.t2k-thin90.a2m with 90 sequences, total weight= 15.4567 avg weight= 0.171741 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u60A/info/1u60A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1u60A/nostruct-align/1u60A.t2k-thin90.a2m.gz, have 139282 columns in 580 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jg1A/nostruct-align/1jg1A.t2k-thin90.a2m.gz # 1jg1A.t2k-thin90.a2m with 454 sequences, total weight= 454 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.894937 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jg1A/info/1jg1A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jg1A/nostruct-align/1jg1A.t2k-thin90.a2m.gz, have 139497 columns in 581 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f3uB/nostruct-align/1f3uB.t2k-thin90.a2m.gz # 1f3uB.t2k-thin90.a2m with 8 sequences, total weight= 5.19588 avg weight= 0.649485 15 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f3uB/info/1f3uB.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f3uB/nostruct-align/1f3uB.t2k-thin90.a2m.gz, have 139636 columns in 582 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mxiA/nostruct-align/1mxiA.t2k-thin90.a2m.gz # 1mxiA.t2k-thin90.a2m with 258 sequences, total weight= 107.228 avg weight= 0.415613 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30213 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mxiA/info/1mxiA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mxiA/nostruct-align/1mxiA.t2k-thin90.a2m.gz, have 139792 columns in 583 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tbfA/nostruct-align/1tbfA.t2k-thin90.a2m.gz # 1tbfA.t2k-thin90.a2m with 167 sequences, total weight= 59.4535 avg weight= 0.356009 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tbfA/info/1tbfA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tbfA/nostruct-align/1tbfA.t2k-thin90.a2m.gz, have 140118 columns in 584 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rh6A/nostruct-align/1rh6A.t2k-thin90.a2m.gz # 1rh6A.t2k-thin90.a2m with 6 sequences, total weight= 5.44098 avg weight= 0.906831 15 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rh6A/info/1rh6A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rh6A/nostruct-align/1rh6A.t2k-thin90.a2m.gz, have 140173 columns in 585 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oboA/nostruct-align/1oboA.t2k-thin90.a2m.gz # 1oboA.t2k-thin90.a2m with 165 sequences, total weight= 165 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27517 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oboA/info/1oboA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oboA/nostruct-align/1oboA.t2k-thin90.a2m.gz, have 140342 columns in 586 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jfxA/nostruct-align/1jfxA.t2k-thin90.a2m.gz # 1jfxA.t2k-thin90.a2m with 95 sequences, total weight= 95 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19091 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jfxA/info/1jfxA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jfxA/nostruct-align/1jfxA.t2k-thin90.a2m.gz, have 140559 columns in 587 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f86A/nostruct-align/1f86A.t2k-thin90.a2m.gz # 1f86A.t2k-thin90.a2m with 47 sequences, total weight= 9.31995 avg weight= 0.198297 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f86A/info/1f86A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f86A/nostruct-align/1f86A.t2k-thin90.a2m.gz, have 140674 columns in 588 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m4iA/nostruct-align/1m4iA.t2k-thin90.a2m.gz # 1m4iA.t2k-thin90.a2m with 88 sequences, total weight= 88 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19254 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m4iA/info/1m4iA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m4iA/nostruct-align/1m4iA.t2k-thin90.a2m.gz, have 140855 columns in 589 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qwnA/nostruct-align/1qwnA.t2k-thin90.a2m.gz # 1qwnA.t2k-thin90.a2m with 94 sequences, total weight= 94 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14716 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qwnA/info/1qwnA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qwnA/nostruct-align/1qwnA.t2k-thin90.a2m.gz, have 141869 columns in 590 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iuqA/nostruct-align/1iuqA.t2k-thin90.a2m.gz # 1iuqA.t2k-thin90.a2m with 20 sequences, total weight= 8.02695 avg weight= 0.401347 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iuqA/info/1iuqA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iuqA/nostruct-align/1iuqA.t2k-thin90.a2m.gz, have 142226 columns in 591 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v2zA/nostruct-align/1v2zA.t2k-thin90.a2m.gz # 1v2zA.t2k-thin90.a2m with 9 sequences, total weight= 3.40093 avg weight= 0.377881 14 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v2zA/info/1v2zA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v2zA/nostruct-align/1v2zA.t2k-thin90.a2m.gz, have 142332 columns in 592 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nqzA/nostruct-align/1nqzA.t2k-thin90.a2m.gz # 1nqzA.t2k-thin90.a2m with 602 sequences, total weight= 602 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07278 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nqzA/info/1nqzA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nqzA/nostruct-align/1nqzA.t2k-thin90.a2m.gz, have 142503 columns in 593 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kafA/nostruct-align/1kafA.t2k-thin90.a2m.gz # 1kafA.t2k-thin90.a2m with 3 sequences, total weight= 3 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0778 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kafA/info/1kafA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kafA/nostruct-align/1kafA.t2k-thin90.a2m.gz, have 142611 columns in 594 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2e/2eng/nostruct-align/2eng.t2k-thin90.a2m.gz # 2eng.t2k-thin90.a2m with 20 sequences, total weight= 4.48624 avg weight= 0.224312 20 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2e/2eng/info/2eng.stride-mixed.CB-burial-14-7 WARNING: skipping e, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/2e/2eng/nostruct-align/2eng.t2k-thin90.a2m.gz, have 142816 columns in 595 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ogoX/nostruct-align/1ogoX.t2k-thin90.a2m.gz # 1ogoX.t2k-thin90.a2m with 5 sequences, total weight= 3.81006 avg weight= 0.762011 12 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ogoX/info/1ogoX.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ogoX/nostruct-align/1ogoX.t2k-thin90.a2m.gz, have 143388 columns in 596 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o9wA/nostruct-align/1o9wA.t2k-thin90.a2m.gz # 1o9wA.t2k-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.623702 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o9wA/info/1o9wA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o9wA/nostruct-align/1o9wA.t2k-thin90.a2m.gz, have 143557 columns in 597 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1ku3A/nostruct-align/1ku3A.t2k-thin90.a2m.gz # 1ku3A.t2k-thin90.a2m with 176 sequences, total weight= 14.765 avg weight= 0.0838922 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1ku3A/info/1ku3A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1ku3A/nostruct-align/1ku3A.t2k-thin90.a2m.gz, have 143618 columns in 598 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q0rA/nostruct-align/1q0rA.t2k-thin90.a2m.gz # 1q0rA.t2k-thin90.a2m with 999 sequences, total weight= 999 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.861661 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q0rA/info/1q0rA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q0rA/nostruct-align/1q0rA.t2k-thin90.a2m.gz, have 143915 columns in 599 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fr2A/nostruct-align/1fr2A.t2k-thin90.a2m.gz # 1fr2A.t2k-thin90.a2m with 15 sequences, total weight= 4.37636 avg weight= 0.291757 19 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fr2A/info/1fr2A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fr2A/nostruct-align/1fr2A.t2k-thin90.a2m.gz, have 143998 columns in 600 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m70A/nostruct-align/1m70A.t2k-thin90.a2m.gz # 1m70A.t2k-thin90.a2m with 299 sequences, total weight= 299 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13622 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m70A/info/1m70A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m70A/nostruct-align/1m70A.t2k-thin90.a2m.gz, have 144188 columns in 601 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qg8A/nostruct-align/1qg8A.t2k-thin90.a2m.gz # 1qg8A.t2k-thin90.a2m with 477 sequences, total weight= 477 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.974505 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qg8A/info/1qg8A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qg8A/nostruct-align/1qg8A.t2k-thin90.a2m.gz, have 144426 columns in 602 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gveA/nostruct-align/1gveA.t2k-thin90.a2m.gz # 1gveA.t2k-thin90.a2m with 453 sequences, total weight= 453 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28575 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gveA/info/1gveA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gveA/nostruct-align/1gveA.t2k-thin90.a2m.gz, have 144750 columns in 603 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lm5A/nostruct-align/1lm5A.t2k-thin90.a2m.gz # 1lm5A.t2k-thin90.a2m with 74 sequences, total weight= 74 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26737 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lm5A/info/1lm5A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lm5A/nostruct-align/1lm5A.t2k-thin90.a2m.gz, have 144939 columns in 604 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p90A/nostruct-align/1p90A.t2k-thin90.a2m.gz # 1p90A.t2k-thin90.a2m with 89 sequences, total weight= 40.6452 avg weight= 0.456687 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p90A/info/1p90A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p90A/nostruct-align/1p90A.t2k-thin90.a2m.gz, have 145062 columns in 605 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lq9A/nostruct-align/1lq9A.t2k-thin90.a2m.gz # 1lq9A.t2k-thin90.a2m with 11 sequences, total weight= 11 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2657 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lq9A/info/1lq9A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lq9A/nostruct-align/1lq9A.t2k-thin90.a2m.gz, have 145174 columns in 606 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uuyA/nostruct-align/1uuyA.t2k-thin90.a2m.gz # 1uuyA.t2k-thin90.a2m with 292 sequences, total weight= 166.234 avg weight= 0.569296 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30179 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uuyA/info/1uuyA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uuyA/nostruct-align/1uuyA.t2k-thin90.a2m.gz, have 145335 columns in 607 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1z/1zin/nostruct-align/1zin.t2k-thin90.a2m.gz # 1zin.t2k-thin90.a2m with 199 sequences, total weight= 199 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22769 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1z/1zin/info/1zin.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1z/1zin/nostruct-align/1zin.t2k-thin90.a2m.gz, have 145552 columns in 608 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pz7A/nostruct-align/1pz7A.t2k-thin90.a2m.gz # 1pz7A.t2k-thin90.a2m with 305 sequences, total weight= 305 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.968487 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pz7A/info/1pz7A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pz7A/nostruct-align/1pz7A.t2k-thin90.a2m.gz, have 145740 columns in 609 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l5oA/nostruct-align/1l5oA.t2k-thin90.a2m.gz # 1l5oA.t2k-thin90.a2m with 71 sequences, total weight= 17.1386 avg weight= 0.241388 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l5oA/info/1l5oA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1l5oA/nostruct-align/1l5oA.t2k-thin90.a2m.gz, have 146086 columns in 610 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d4aA/nostruct-align/1d4aA.t2k-thin90.a2m.gz # 1d4aA.t2k-thin90.a2m with 197 sequences, total weight= 103.503 avg weight= 0.525395 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d4aA/info/1d4aA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d4aA/nostruct-align/1d4aA.t2k-thin90.a2m.gz, have 146359 columns in 611 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s3eA/nostruct-align/1s3eA.t2k-thin90.a2m.gz # 1s3eA.t2k-thin90.a2m with 3004 sequences, total weight= 3004 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.7085 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s3eA/info/1s3eA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s3eA/nostruct-align/1s3eA.t2k-thin90.a2m.gz, have 146858 columns in 612 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jhfA/nostruct-align/1jhfA.t2k-thin90.a2m.gz # 1jhfA.t2k-thin90.a2m with 177 sequences, total weight= 177 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28115 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jhfA/info/1jhfA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jhfA/nostruct-align/1jhfA.t2k-thin90.a2m.gz, have 147055 columns in 613 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rgzA/nostruct-align/1rgzA.t2k-thin90.a2m.gz # 1rgzA.t2k-thin90.a2m with 689 sequences, total weight= 689 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04161 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rgzA/info/1rgzA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rgzA/nostruct-align/1rgzA.t2k-thin90.a2m.gz, have 147418 columns in 614 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mla/nostruct-align/1mla.t2k-thin90.a2m.gz # 1mla.t2k-thin90.a2m with 375 sequences, total weight= 193.42 avg weight= 0.515787 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30393 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mla/info/1mla.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mla/nostruct-align/1mla.t2k-thin90.a2m.gz, have 147723 columns in 615 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f9vA/nostruct-align/1f9vA.t2k-thin90.a2m.gz # 1f9vA.t2k-thin90.a2m with 287 sequences, total weight= 32.0344 avg weight= 0.111618 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f9vA/info/1f9vA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f9vA/nostruct-align/1f9vA.t2k-thin90.a2m.gz, have 148036 columns in 616 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n8kA/nostruct-align/1n8kA.t2k-thin90.a2m.gz # 1n8kA.t2k-thin90.a2m with 1135 sequences, total weight= 1135 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2242 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n8kA/info/1n8kA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n8kA/nostruct-align/1n8kA.t2k-thin90.a2m.gz, have 148410 columns in 617 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jx4A/nostruct-align/1jx4A.t2k-thin90.a2m.gz # 1jx4A.t2k-thin90.a2m with 201 sequences, total weight= 114.531 avg weight= 0.569808 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30153 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jx4A/info/1jx4A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jx4A/nostruct-align/1jx4A.t2k-thin90.a2m.gz, have 148751 columns in 618 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n97A/nostruct-align/1n97A.t2k-thin90.a2m.gz # 1n97A.t2k-thin90.a2m with 1678 sequences, total weight= 1678 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10027 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n97A/info/1n97A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n97A/nostruct-align/1n97A.t2k-thin90.a2m.gz, have 149136 columns in 619 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k92A/nostruct-align/1k92A.t2k-thin90.a2m.gz # 1k92A.t2k-thin90.a2m with 123 sequences, total weight= 16.3904 avg weight= 0.133255 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k92A/info/1k92A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k92A/nostruct-align/1k92A.t2k-thin90.a2m.gz, have 149580 columns in 620 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pkhA/nostruct-align/1pkhA.t2k-thin90.a2m.gz # 1pkhA.t2k-thin90.a2m with 150 sequences, total weight= 123.457 avg weight= 0.823045 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pkhA/info/1pkhA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pkhA/nostruct-align/1pkhA.t2k-thin90.a2m.gz, have 149762 columns in 621 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q3oA/nostruct-align/1q3oA.t2k-thin90.a2m.gz # 1q3oA.t2k-thin90.a2m with 485 sequences, total weight= 467.547 avg weight= 0.964015 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30041 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q3oA/info/1q3oA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q3oA/nostruct-align/1q3oA.t2k-thin90.a2m.gz, have 149866 columns in 622 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kqrA/nostruct-align/1kqrA.t2k-thin90.a2m.gz # 1kqrA.t2k-thin90.a2m with 38 sequences, total weight= 6.60005 avg weight= 0.173686 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kqrA/info/1kqrA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kqrA/nostruct-align/1kqrA.t2k-thin90.a2m.gz, have 150026 columns in 623 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1euvA/nostruct-align/1euvA.t2k-thin90.a2m.gz # 1euvA.t2k-thin90.a2m with 98 sequences, total weight= 98 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07322 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1euvA/info/1euvA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1euvA/nostruct-align/1euvA.t2k-thin90.a2m.gz, have 150247 columns in 624 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d3gA/nostruct-align/1d3gA.t2k-thin90.a2m.gz # 1d3gA.t2k-thin90.a2m with 289 sequences, total weight= 289 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2087 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d3gA/info/1d3gA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d3gA/nostruct-align/1d3gA.t2k-thin90.a2m.gz, have 150607 columns in 625 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uufA/nostruct-align/1uufA.t2k-thin90.a2m.gz # 1uufA.t2k-thin90.a2m with 1598 sequences, total weight= 1598 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24015 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uufA/info/1uufA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uufA/nostruct-align/1uufA.t2k-thin90.a2m.gz, have 150946 columns in 626 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1it2A/nostruct-align/1it2A.t2k-thin90.a2m.gz # 1it2A.t2k-thin90.a2m with 423 sequences, total weight= 111.305 avg weight= 0.263133 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30316 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1it2A/info/1it2A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1it2A/nostruct-align/1it2A.t2k-thin90.a2m.gz, have 151092 columns in 627 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qb7A/nostruct-align/1qb7A.t2k-thin90.a2m.gz # 1qb7A.t2k-thin90.a2m with 202 sequences, total weight= 202 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16991 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qb7A/info/1qb7A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qb7A/nostruct-align/1qb7A.t2k-thin90.a2m.gz, have 151328 columns in 628 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nn5A/nostruct-align/1nn5A.t2k-thin90.a2m.gz # 1nn5A.t2k-thin90.a2m with 160 sequences, total weight= 160 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29342 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nn5A/info/1nn5A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nn5A/nostruct-align/1nn5A.t2k-thin90.a2m.gz, have 151532 columns in 629 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ucrA/nostruct-align/1ucrA.t2k-thin90.a2m.gz # 1ucrA.t2k-thin90.a2m with 10 sequences, total weight= 4.9536 avg weight= 0.49536 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ucrA/info/1ucrA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ucrA/nostruct-align/1ucrA.t2k-thin90.a2m.gz, have 151606 columns in 630 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s95A/nostruct-align/1s95A.t2k-thin90.a2m.gz # 1s95A.t2k-thin90.a2m with 448 sequences, total weight= 142.42 avg weight= 0.317903 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30103 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s95A/info/1s95A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s95A/nostruct-align/1s95A.t2k-thin90.a2m.gz, have 151930 columns in 631 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jykA/nostruct-align/1jykA.t2k-thin90.a2m.gz # 1jykA.t2k-thin90.a2m with 430 sequences, total weight= 430 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13037 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jykA/info/1jykA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jykA/nostruct-align/1jykA.t2k-thin90.a2m.gz, have 152159 columns in 632 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qazA/nostruct-align/1qazA.t2k-thin90.a2m.gz # 1qazA.t2k-thin90.a2m with 10 sequences, total weight= 6.7346 avg weight= 0.67346 13 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qazA/info/1qazA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qazA/nostruct-align/1qazA.t2k-thin90.a2m.gz, have 152510 columns in 633 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pkoA/nostruct-align/1pkoA.t2k-thin90.a2m.gz # 1pkoA.t2k-thin90.a2m with 1243 sequences, total weight= 1243 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10989 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pkoA/info/1pkoA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pkoA/nostruct-align/1pkoA.t2k-thin90.a2m.gz, have 152634 columns in 634 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n9eA/nostruct-align/1n9eA.t2k-thin90.a2m.gz # 1n9eA.t2k-thin90.a2m with 67 sequences, total weight= 43.825 avg weight= 0.654105 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n9eA/info/1n9eA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n9eA/nostruct-align/1n9eA.t2k-thin90.a2m.gz, have 153369 columns in 635 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l8bA/nostruct-align/1l8bA.t2k-thin90.a2m.gz # 1l8bA.t2k-thin90.a2m with 67 sequences, total weight= 30.0261 avg weight= 0.44815 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l8bA/info/1l8bA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1l8bA/nostruct-align/1l8bA.t2k-thin90.a2m.gz, have 153546 columns in 636 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1go3F/nostruct-align/1go3F.t2k-thin90.a2m.gz # 1go3F.t2k-thin90.a2m with 17 sequences, total weight= 13.4606 avg weight= 0.791799 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1go3F/info/1go3F.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1go3F/nostruct-align/1go3F.t2k-thin90.a2m.gz, have 153653 columns in 637 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rcqA/nostruct-align/1rcqA.t2k-thin90.a2m.gz # 1rcqA.t2k-thin90.a2m with 194 sequences, total weight= 56.0567 avg weight= 0.288952 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rcqA/info/1rcqA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rcqA/nostruct-align/1rcqA.t2k-thin90.a2m.gz, have 154010 columns in 638 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vkeA/nostruct-align/1vkeA.t2k-thin90.a2m.gz # 1vkeA.t2k-thin90.a2m with 150 sequences, total weight= 150 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28857 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vkeA/info/1vkeA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vkeA/nostruct-align/1vkeA.t2k-thin90.a2m.gz, have 154127 columns in 639 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kp6A/nostruct-align/1kp6A.t2k-thin90.a2m.gz # 1kp6A.t2k-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.617161 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kp6A/info/1kp6A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kp6A/nostruct-align/1kp6A.t2k-thin90.a2m.gz, have 154206 columns in 640 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e5kA/nostruct-align/1e5kA.t2k-thin90.a2m.gz # 1e5kA.t2k-thin90.a2m with 254 sequences, total weight= 254 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05367 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e5kA/info/1e5kA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e5kA/nostruct-align/1e5kA.t2k-thin90.a2m.gz, have 154394 columns in 641 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kveA/nostruct-align/1kveA.t2k-thin90.a2m.gz # 1kveA.t2k-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.697962 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kveA/info/1kveA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kveA/nostruct-align/1kveA.t2k-thin90.a2m.gz, have 154457 columns in 642 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eajA/nostruct-align/1eajA.t2k-thin90.a2m.gz # 1eajA.t2k-thin90.a2m with 2813 sequences, total weight= 2813 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28903 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eajA/info/1eajA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1eajA/nostruct-align/1eajA.t2k-thin90.a2m.gz, have 154581 columns in 643 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pgs/nostruct-align/1pgs.t2k-thin90.a2m.gz # 1pgs.t2k-thin90.a2m with 3 sequences, total weight= 3 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.967101 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pgs/info/1pgs.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pgs/nostruct-align/1pgs.t2k-thin90.a2m.gz, have 154892 columns in 644 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pe9A/nostruct-align/1pe9A.t2k-thin90.a2m.gz # 1pe9A.t2k-thin90.a2m with 142 sequences, total weight= 88.904 avg weight= 0.626085 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pe9A/info/1pe9A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pe9A/nostruct-align/1pe9A.t2k-thin90.a2m.gz, have 155253 columns in 645 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2ayh/nostruct-align/2ayh.t2k-thin90.a2m.gz # 2ayh.t2k-thin90.a2m with 182 sequences, total weight= 182 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22039 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2ayh/info/2ayh.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/2a/2ayh/nostruct-align/2ayh.t2k-thin90.a2m.gz, have 155467 columns in 646 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qqqA/nostruct-align/1qqqA.t2k-thin90.a2m.gz # 1qqqA.t2k-thin90.a2m with 160 sequences, total weight= 27.1208 avg weight= 0.169505 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qqqA/info/1qqqA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qqqA/nostruct-align/1qqqA.t2k-thin90.a2m.gz, have 155731 columns in 647 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ucdA/nostruct-align/1ucdA.t2k-thin90.a2m.gz # 1ucdA.t2k-thin90.a2m with 365 sequences, total weight= 137.195 avg weight= 0.375876 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30267 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ucdA/info/1ucdA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ucdA/nostruct-align/1ucdA.t2k-thin90.a2m.gz, have 155921 columns in 648 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uxy/nostruct-align/1uxy.t2k-thin90.a2m.gz # 1uxy.t2k-thin90.a2m with 121 sequences, total weight= 32.5913 avg weight= 0.26935 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uxy/info/1uxy.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uxy/nostruct-align/1uxy.t2k-thin90.a2m.gz, have 156261 columns in 649 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1avwB/nostruct-align/1avwB.t2k-thin90.a2m.gz # 1avwB.t2k-thin90.a2m with 90 sequences, total weight= 49.0697 avg weight= 0.545219 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1avwB/info/1avwB.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1a/1avwB/nostruct-align/1avwB.t2k-thin90.a2m.gz, have 156432 columns in 650 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k07A/nostruct-align/1k07A.t2k-thin90.a2m.gz # 1k07A.t2k-thin90.a2m with 352 sequences, total weight= 352 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.983583 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k07A/info/1k07A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k07A/nostruct-align/1k07A.t2k-thin90.a2m.gz, have 156694 columns in 651 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q52A/nostruct-align/1q52A.t2k-thin90.a2m.gz # 1q52A.t2k-thin90.a2m with 911 sequences, total weight= 253.264 avg weight= 0.278007 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30693 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q52A/info/1q52A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q52A/nostruct-align/1q52A.t2k-thin90.a2m.gz, have 156963 columns in 652 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fxoA/nostruct-align/1fxoA.t2k-thin90.a2m.gz # 1fxoA.t2k-thin90.a2m with 398 sequences, total weight= 398 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20333 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fxoA/info/1fxoA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fxoA/nostruct-align/1fxoA.t2k-thin90.a2m.gz, have 157255 columns in 653 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1od3A/nostruct-align/1od3A.t2k-thin90.a2m.gz # 1od3A.t2k-thin90.a2m with 82 sequences, total weight= 55.7222 avg weight= 0.679539 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1od3A/info/1od3A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1od3A/nostruct-align/1od3A.t2k-thin90.a2m.gz, have 157386 columns in 654 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qwyA/nostruct-align/1qwyA.t2k-thin90.a2m.gz # 1qwyA.t2k-thin90.a2m with 448 sequences, total weight= 448 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09232 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qwyA/info/1qwyA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qwyA/nostruct-align/1qwyA.t2k-thin90.a2m.gz, have 157620 columns in 655 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jigA/nostruct-align/1jigA.t2k-thin90.a2m.gz # 1jigA.t2k-thin90.a2m with 171 sequences, total weight= 111.007 avg weight= 0.649166 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30094 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jigA/info/1jigA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jigA/nostruct-align/1jigA.t2k-thin90.a2m.gz, have 157766 columns in 656 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iibA/nostruct-align/1iibA.t2k-thin90.a2m.gz # 1iibA.t2k-thin90.a2m with 60 sequences, total weight= 14.1053 avg weight= 0.235088 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iibA/info/1iibA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iibA/nostruct-align/1iibA.t2k-thin90.a2m.gz, have 157869 columns in 657 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dcs/nostruct-align/1dcs.t2k-thin90.a2m.gz # 1dcs.t2k-thin90.a2m with 289 sequences, total weight= 118.987 avg weight= 0.41172 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30242 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dcs/info/1dcs.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dcs/nostruct-align/1dcs.t2k-thin90.a2m.gz, have 158148 columns in 658 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mnaA/nostruct-align/1mnaA.t2k-thin90.a2m.gz # 1mnaA.t2k-thin90.a2m with 284 sequences, total weight= 284 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.846483 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mnaA/info/1mnaA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mnaA/nostruct-align/1mnaA.t2k-thin90.a2m.gz, have 158424 columns in 659 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1suuA/nostruct-align/1suuA.t2k-thin90.a2m.gz # 1suuA.t2k-thin90.a2m with 238 sequences, total weight= 82.7719 avg weight= 0.347781 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30128 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1suuA/info/1suuA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1suuA/nostruct-align/1suuA.t2k-thin90.a2m.gz, have 158717 columns in 660 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sfdA/nostruct-align/1sfdA.t2k-thin90.a2m.gz # 1sfdA.t2k-thin90.a2m with 159 sequences, total weight= 136.379 avg weight= 0.857728 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sfdA/info/1sfdA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sfdA/nostruct-align/1sfdA.t2k-thin90.a2m.gz, have 158822 columns in 661 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i0vA/nostruct-align/1i0vA.t2k-thin90.a2m.gz # 1i0vA.t2k-thin90.a2m with 13 sequences, total weight= 3.71867 avg weight= 0.286052 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i0vA/info/1i0vA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i0vA/nostruct-align/1i0vA.t2k-thin90.a2m.gz, have 158926 columns in 662 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3b/3bamA/nostruct-align/3bamA.t2k-thin90.a2m.gz # 3bamA.t2k-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.88126 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3b/3bamA/info/3bamA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/3b/3bamA/nostruct-align/3bamA.t2k-thin90.a2m.gz, have 159132 columns in 663 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iq4A/nostruct-align/1iq4A.t2k-thin90.a2m.gz # 1iq4A.t2k-thin90.a2m with 182 sequences, total weight= 23.5567 avg weight= 0.129432 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iq4A/info/1iq4A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iq4A/nostruct-align/1iq4A.t2k-thin90.a2m.gz, have 159311 columns in 664 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o9rA/nostruct-align/1o9rA.t2k-thin90.a2m.gz # 1o9rA.t2k-thin90.a2m with 108 sequences, total weight= 108 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28499 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o9rA/info/1o9rA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o9rA/nostruct-align/1o9rA.t2k-thin90.a2m.gz, have 159473 columns in 665 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gyxA/nostruct-align/1gyxA.t2k-thin90.a2m.gz # 1gyxA.t2k-thin90.a2m with 21 sequences, total weight= 10.5899 avg weight= 0.504281 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gyxA/info/1gyxA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gyxA/nostruct-align/1gyxA.t2k-thin90.a2m.gz, have 159549 columns in 666 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vk1A/nostruct-align/1vk1A.t2k-thin90.a2m.gz # 1vk1A.t2k-thin90.a2m with 153 sequences, total weight= 109.893 avg weight= 0.718254 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vk1A/info/1vk1A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vk1A/nostruct-align/1vk1A.t2k-thin90.a2m.gz, have 159781 columns in 667 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t1dA/nostruct-align/1t1dA.t2k-thin90.a2m.gz # 1t1dA.t2k-thin90.a2m with 102 sequences, total weight= 33.4575 avg weight= 0.328015 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t1dA/info/1t1dA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t1dA/nostruct-align/1t1dA.t2k-thin90.a2m.gz, have 159881 columns in 668 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2t/2trxA/nostruct-align/2trxA.t2k-thin90.a2m.gz # 2trxA.t2k-thin90.a2m with 665 sequences, total weight= 665 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17012 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2t/2trxA/info/2trxA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/2t/2trxA/nostruct-align/2trxA.t2k-thin90.a2m.gz, have 159989 columns in 669 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s1dA/nostruct-align/1s1dA.t2k-thin90.a2m.gz # 1s1dA.t2k-thin90.a2m with 12 sequences, total weight= 5.50736 avg weight= 0.458947 20 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s1dA/info/1s1dA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s1dA/nostruct-align/1s1dA.t2k-thin90.a2m.gz, have 160306 columns in 670 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gca/nostruct-align/1gca.t2k-thin90.a2m.gz # 1gca.t2k-thin90.a2m with 345 sequences, total weight= 345 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07687 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gca/info/1gca.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gca/nostruct-align/1gca.t2k-thin90.a2m.gz, have 160615 columns in 671 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d3vA/nostruct-align/1d3vA.t2k-thin90.a2m.gz # 1d3vA.t2k-thin90.a2m with 186 sequences, total weight= 186 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28987 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d3vA/info/1d3vA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d3vA/nostruct-align/1d3vA.t2k-thin90.a2m.gz, have 160923 columns in 672 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eyhA/nostruct-align/1eyhA.t2k-thin90.a2m.gz # 1eyhA.t2k-thin90.a2m with 44 sequences, total weight= 23.6959 avg weight= 0.538543 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eyhA/info/1eyhA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1eyhA/nostruct-align/1eyhA.t2k-thin90.a2m.gz, have 161067 columns in 673 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1aqzA/nostruct-align/1aqzA.t2k-thin90.a2m.gz # 1aqzA.t2k-thin90.a2m with 3 sequences, total weight= 1.87734 avg weight= 0.62578 7 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1aqzA/info/1aqzA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1a/1aqzA/nostruct-align/1aqzA.t2k-thin90.a2m.gz, have 161209 columns in 674 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vlaA/nostruct-align/1vlaA.t2k-thin90.a2m.gz # 1vlaA.t2k-thin90.a2m with 115 sequences, total weight= 115 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19013 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vlaA/info/1vlaA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vlaA/nostruct-align/1vlaA.t2k-thin90.a2m.gz, have 161353 columns in 675 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vclA/nostruct-align/1vclA.t2k-thin90.a2m.gz # 1vclA.t2k-thin90.a2m with 125 sequences, total weight= 42.6107 avg weight= 0.340886 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vclA/info/1vclA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vclA/nostruct-align/1vclA.t2k-thin90.a2m.gz, have 161785 columns in 676 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mfmA/nostruct-align/1mfmA.t2k-thin90.a2m.gz # 1mfmA.t2k-thin90.a2m with 175 sequences, total weight= 21.8298 avg weight= 0.124742 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mfmA/info/1mfmA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mfmA/nostruct-align/1mfmA.t2k-thin90.a2m.gz, have 161938 columns in 677 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1whi/nostruct-align/1whi.t2k-thin90.a2m.gz # 1whi.t2k-thin90.a2m with 179 sequences, total weight= 17.6002 avg weight= 0.0983252 37 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1whi/info/1whi.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1w/1whi/nostruct-align/1whi.t2k-thin90.a2m.gz, have 162060 columns in 678 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1ks9A/nostruct-align/1ks9A.t2k-thin90.a2m.gz # 1ks9A.t2k-thin90.a2m with 149 sequences, total weight= 149 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17004 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1ks9A/info/1ks9A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1ks9A/nostruct-align/1ks9A.t2k-thin90.a2m.gz, have 162351 columns in 679 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vns/nostruct-align/1vns.t2k-thin90.a2m.gz # 1vns.t2k-thin90.a2m with 10 sequences, total weight= 10 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26786 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vns/info/1vns.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vns/nostruct-align/1vns.t2k-thin90.a2m.gz, have 162925 columns in 680 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1ayl/nostruct-align/1ayl.t2k-thin90.a2m.gz # 1ayl.t2k-thin90.a2m with 77 sequences, total weight= 22.9477 avg weight= 0.298022 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1ayl/info/1ayl.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1a/1ayl/nostruct-align/1ayl.t2k-thin90.a2m.gz, have 163457 columns in 681 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vhuA/nostruct-align/1vhuA.t2k-thin90.a2m.gz # 1vhuA.t2k-thin90.a2m with 127 sequences, total weight= 79.2484 avg weight= 0.624003 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vhuA/info/1vhuA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vhuA/nostruct-align/1vhuA.t2k-thin90.a2m.gz, have 163649 columns in 682 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h2cA/nostruct-align/1h2cA.t2k-thin90.a2m.gz # 1h2cA.t2k-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01055 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h2cA/info/1h2cA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h2cA/nostruct-align/1h2cA.t2k-thin90.a2m.gz, have 163773 columns in 683 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/5n/5nul/nostruct-align/5nul.t2k-thin90.a2m.gz # 5nul.t2k-thin90.a2m with 249 sequences, total weight= 249 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17639 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/5n/5nul/info/5nul.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/5n/5nul/nostruct-align/5nul.t2k-thin90.a2m.gz, have 163911 columns in 684 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k7jA/nostruct-align/1k7jA.t2k-thin90.a2m.gz # 1k7jA.t2k-thin90.a2m with 225 sequences, total weight= 70.8579 avg weight= 0.314924 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30089 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k7jA/info/1k7jA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k7jA/nostruct-align/1k7jA.t2k-thin90.a2m.gz, have 164117 columns in 685 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gqzA/nostruct-align/1gqzA.t2k-thin90.a2m.gz # 1gqzA.t2k-thin90.a2m with 100 sequences, total weight= 34.3972 avg weight= 0.343972 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gqzA/info/1gqzA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gqzA/nostruct-align/1gqzA.t2k-thin90.a2m.gz, have 164391 columns in 686 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gxuA/nostruct-align/1gxuA.t2k-thin90.a2m.gz # 1gxuA.t2k-thin90.a2m with 144 sequences, total weight= 36.5378 avg weight= 0.253735 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gxuA/info/1gxuA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gxuA/nostruct-align/1gxuA.t2k-thin90.a2m.gz, have 164479 columns in 687 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fiuA/nostruct-align/1fiuA.t2k-thin90.a2m.gz # 1fiuA.t2k-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19094 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fiuA/info/1fiuA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fiuA/nostruct-align/1fiuA.t2k-thin90.a2m.gz, have 164765 columns in 688 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pfvA/nostruct-align/1pfvA.t2k-thin90.a2m.gz # 1pfvA.t2k-thin90.a2m with 864 sequences, total weight= 864 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20203 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pfvA/info/1pfvA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pfvA/nostruct-align/1pfvA.t2k-thin90.a2m.gz, have 165312 columns in 689 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1csh/nostruct-align/1csh.t2k-thin90.a2m.gz # 1csh.t2k-thin90.a2m with 123 sequences, total weight= 34.441 avg weight= 0.280008 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1csh/info/1csh.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1c/1csh/nostruct-align/1csh.t2k-thin90.a2m.gz, have 165747 columns in 690 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t1jA/nostruct-align/1t1jA.t2k-thin90.a2m.gz # 1t1jA.t2k-thin90.a2m with 2 sequences, total weight= 1.92975 avg weight= 0.964877 6 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t1jA/info/1t1jA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t1jA/nostruct-align/1t1jA.t2k-thin90.a2m.gz, have 165866 columns in 691 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oh4A/nostruct-align/1oh4A.t2k-thin90.a2m.gz # 1oh4A.t2k-thin90.a2m with 5 sequences, total weight= 4.81508 avg weight= 0.963016 11 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oh4A/info/1oh4A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oh4A/nostruct-align/1oh4A.t2k-thin90.a2m.gz, have 166040 columns in 692 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1thfD/nostruct-align/1thfD.t2k-thin90.a2m.gz # 1thfD.t2k-thin90.a2m with 444 sequences, total weight= 444 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2861 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1thfD/info/1thfD.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1thfD/nostruct-align/1thfD.t2k-thin90.a2m.gz, have 166293 columns in 693 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/7a/7a3hA/nostruct-align/7a3hA.t2k-thin90.a2m.gz # 7a3hA.t2k-thin90.a2m with 157 sequences, total weight= 157 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08996 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/7a/7a3hA/info/7a3hA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/7a/7a3hA/nostruct-align/7a3hA.t2k-thin90.a2m.gz, have 166593 columns in 694 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lbu/nostruct-align/1lbu.t2k-thin90.a2m.gz # 1lbu.t2k-thin90.a2m with 185 sequences, total weight= 185 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2035 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lbu/info/1lbu.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lbu/nostruct-align/1lbu.t2k-thin90.a2m.gz, have 166806 columns in 695 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ejxC/nostruct-align/1ejxC.t2k-thin90.a2m.gz # 1ejxC.t2k-thin90.a2m with 384 sequences, total weight= 378.443 avg weight= 0.985528 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ejxC/info/1ejxC.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ejxC/nostruct-align/1ejxC.t2k-thin90.a2m.gz, have 167362 columns in 696 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tfe/nostruct-align/1tfe.t2k-thin90.a2m.gz # 1tfe.t2k-thin90.a2m with 137 sequences, total weight= 17.5714 avg weight= 0.128258 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tfe/info/1tfe.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tfe/nostruct-align/1tfe.t2k-thin90.a2m.gz, have 167504 columns in 697 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d2nA/nostruct-align/1d2nA.t2k-thin90.a2m.gz # 1d2nA.t2k-thin90.a2m with 499 sequences, total weight= 499 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25321 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d2nA/info/1d2nA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d2nA/nostruct-align/1d2nA.t2k-thin90.a2m.gz, have 167750 columns in 698 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qd1A/nostruct-align/1qd1A.t2k-thin90.a2m.gz # 1qd1A.t2k-thin90.a2m with 21 sequences, total weight= 6.92716 avg weight= 0.329865 19 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qd1A/info/1qd1A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qd1A/nostruct-align/1qd1A.t2k-thin90.a2m.gz, have 168069 columns in 699 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ogqA/nostruct-align/1ogqA.t2k-thin90.a2m.gz # 1ogqA.t2k-thin90.a2m with 2347 sequences, total weight= 2347 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03589 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ogqA/info/1ogqA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ogqA/nostruct-align/1ogqA.t2k-thin90.a2m.gz, have 168382 columns in 700 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v6sA/nostruct-align/1v6sA.t2k-thin90.a2m.gz # 1v6sA.t2k-thin90.a2m with 223 sequences, total weight= 14.3221 avg weight= 0.0642247 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v6sA/info/1v6sA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v6sA/nostruct-align/1v6sA.t2k-thin90.a2m.gz, have 168772 columns in 701 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t6uA/nostruct-align/1t6uA.t2k-thin90.a2m.gz # 1t6uA.t2k-thin90.a2m with 8 sequences, total weight= 3.01376 avg weight= 0.376719 12 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t6uA/info/1t6uA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t6uA/nostruct-align/1t6uA.t2k-thin90.a2m.gz, have 168889 columns in 702 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ekqA/nostruct-align/1ekqA.t2k-thin90.a2m.gz # 1ekqA.t2k-thin90.a2m with 145 sequences, total weight= 136.131 avg weight= 0.938834 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ekqA/info/1ekqA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ekqA/nostruct-align/1ekqA.t2k-thin90.a2m.gz, have 169143 columns in 703 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1njhA/nostruct-align/1njhA.t2k-thin90.a2m.gz # 1njhA.t2k-thin90.a2m with 6 sequences, total weight= 3.08793 avg weight= 0.514655 14 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1njhA/info/1njhA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1njhA/nostruct-align/1njhA.t2k-thin90.a2m.gz, have 169251 columns in 704 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1xfsA/nostruct-align/1xfsA.t2k-thin90.a2m.gz # 1xfsA.t2k-thin90.a2m with 102 sequences, total weight= 102 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22408 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1xfsA/info/1xfsA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1x/1xfsA/nostruct-align/1xfsA.t2k-thin90.a2m.gz, have 169405 columns in 705 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lriA/nostruct-align/1lriA.t2k-thin90.a2m.gz # 1lriA.t2k-thin90.a2m with 24 sequences, total weight= 4.99884 avg weight= 0.208285 20 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lriA/info/1lriA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lriA/nostruct-align/1lriA.t2k-thin90.a2m.gz, have 169503 columns in 706 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dzkA/nostruct-align/1dzkA.t2k-thin90.a2m.gz # 1dzkA.t2k-thin90.a2m with 84 sequences, total weight= 84 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27267 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dzkA/info/1dzkA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dzkA/nostruct-align/1dzkA.t2k-thin90.a2m.gz, have 169651 columns in 707 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vhsA/nostruct-align/1vhsA.t2k-thin90.a2m.gz # 1vhsA.t2k-thin90.a2m with 976 sequences, total weight= 976 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.917532 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vhsA/info/1vhsA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vhsA/nostruct-align/1vhsA.t2k-thin90.a2m.gz, have 169816 columns in 708 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1muwA/nostruct-align/1muwA.t2k-thin90.a2m.gz # 1muwA.t2k-thin90.a2m with 69 sequences, total weight= 31.2402 avg weight= 0.452756 31 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1muwA/info/1muwA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1muwA/nostruct-align/1muwA.t2k-thin90.a2m.gz, have 170202 columns in 709 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1orvA/nostruct-align/1orvA.t2k-thin90.a2m.gz # 1orvA.t2k-thin90.a2m with 249 sequences, total weight= 249 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.831695 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1orvA/info/1orvA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1orvA/nostruct-align/1orvA.t2k-thin90.a2m.gz, have 170930 columns in 710 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jhgA/nostruct-align/1jhgA.t2k-thin90.a2m.gz # 1jhgA.t2k-thin90.a2m with 25 sequences, total weight= 13.5581 avg weight= 0.542323 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jhgA/info/1jhgA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jhgA/nostruct-align/1jhgA.t2k-thin90.a2m.gz, have 171031 columns in 711 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r0uA/nostruct-align/1r0uA.t2k-thin90.a2m.gz # 1r0uA.t2k-thin90.a2m with 21 sequences, total weight= 21 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15189 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r0uA/info/1r0uA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r0uA/nostruct-align/1r0uA.t2k-thin90.a2m.gz, have 171173 columns in 712 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ed8A/nostruct-align/1ed8A.t2k-thin90.a2m.gz # 1ed8A.t2k-thin90.a2m with 116 sequences, total weight= 46.095 avg weight= 0.397371 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ed8A/info/1ed8A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ed8A/nostruct-align/1ed8A.t2k-thin90.a2m.gz, have 171622 columns in 713 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kngA/nostruct-align/1kngA.t2k-thin90.a2m.gz # 1kngA.t2k-thin90.a2m with 430 sequences, total weight= 430 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20561 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kngA/info/1kngA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kngA/nostruct-align/1kngA.t2k-thin90.a2m.gz, have 171766 columns in 714 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gmuA/nostruct-align/1gmuA.t2k-thin90.a2m.gz # 1gmuA.t2k-thin90.a2m with 57 sequences, total weight= 32.238 avg weight= 0.565579 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gmuA/info/1gmuA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gmuA/nostruct-align/1gmuA.t2k-thin90.a2m.gz, have 171904 columns in 715 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1aohA/nostruct-align/1aohA.t2k-thin90.a2m.gz # 1aohA.t2k-thin90.a2m with 29 sequences, total weight= 18.7337 avg weight= 0.64599 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1aohA/info/1aohA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1a/1aohA/nostruct-align/1aohA.t2k-thin90.a2m.gz, have 172047 columns in 716 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g6gA/nostruct-align/1g6gA.t2k-thin90.a2m.gz # 1g6gA.t2k-thin90.a2m with 201 sequences, total weight= 201 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24369 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g6gA/info/1g6gA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g6gA/nostruct-align/1g6gA.t2k-thin90.a2m.gz, have 172174 columns in 717 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1din/nostruct-align/1din.t2k-thin90.a2m.gz # 1din.t2k-thin90.a2m with 241 sequences, total weight= 241 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.979966 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1din/info/1din.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1din/nostruct-align/1din.t2k-thin90.a2m.gz, have 172407 columns in 718 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gyvA/nostruct-align/1gyvA.t2k-thin90.a2m.gz # 1gyvA.t2k-thin90.a2m with 29 sequences, total weight= 18.4184 avg weight= 0.635118 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gyvA/info/1gyvA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gyvA/nostruct-align/1gyvA.t2k-thin90.a2m.gz, have 172527 columns in 719 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1ls9A/nostruct-align/1ls9A.t2k-thin90.a2m.gz # 1ls9A.t2k-thin90.a2m with 361 sequences, total weight= 361 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1997 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1ls9A/info/1ls9A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1ls9A/nostruct-align/1ls9A.t2k-thin90.a2m.gz, have 172618 columns in 720 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o3uA/nostruct-align/1o3uA.t2k-thin90.a2m.gz # 1o3uA.t2k-thin90.a2m with 56 sequences, total weight= 48.753 avg weight= 0.870589 41 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o3uA/info/1o3uA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o3uA/nostruct-align/1o3uA.t2k-thin90.a2m.gz, have 172738 columns in 721 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e19A/nostruct-align/1e19A.t2k-thin90.a2m.gz # 1e19A.t2k-thin90.a2m with 307 sequences, total weight= 192.645 avg weight= 0.627507 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30221 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e19A/info/1e19A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e19A/nostruct-align/1e19A.t2k-thin90.a2m.gz, have 173051 columns in 722 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iujA/nostruct-align/1iujA.t2k-thin90.a2m.gz # 1iujA.t2k-thin90.a2m with 113 sequences, total weight= 113 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13203 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iujA/info/1iujA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iujA/nostruct-align/1iujA.t2k-thin90.a2m.gz, have 173153 columns in 723 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g5aA/nostruct-align/1g5aA.t2k-thin90.a2m.gz # 1g5aA.t2k-thin90.a2m with 437 sequences, total weight= 437 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.949663 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g5aA/info/1g5aA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g5aA/nostruct-align/1g5aA.t2k-thin90.a2m.gz, have 173781 columns in 724 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jtvA/nostruct-align/1jtvA.t2k-thin90.a2m.gz # 1jtvA.t2k-thin90.a2m with 3266 sequences, total weight= 3266 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19126 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jtvA/info/1jtvA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jtvA/nostruct-align/1jtvA.t2k-thin90.a2m.gz, have 174059 columns in 725 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1ako/nostruct-align/1ako.t2k-thin90.a2m.gz # 1ako.t2k-thin90.a2m with 227 sequences, total weight= 227 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25401 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1ako/info/1ako.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1a/1ako/nostruct-align/1ako.t2k-thin90.a2m.gz, have 174327 columns in 726 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ijyA/nostruct-align/1ijyA.t2k-thin90.a2m.gz # 1ijyA.t2k-thin90.a2m with 79 sequences, total weight= 30.2521 avg weight= 0.382938 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ijyA/info/1ijyA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ijyA/nostruct-align/1ijyA.t2k-thin90.a2m.gz, have 174449 columns in 727 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nh0A/nostruct-align/1nh0A.t2k-thin90.a2m.gz # 1nh0A.t2k-thin90.a2m with 966 sequences, total weight= 2.82694 avg weight= 0.00292644 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nh0A/info/1nh0A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nh0A/nostruct-align/1nh0A.t2k-thin90.a2m.gz, have 174548 columns in 728 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k2eA/nostruct-align/1k2eA.t2k-thin90.a2m.gz # 1k2eA.t2k-thin90.a2m with 623 sequences, total weight= 623 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.94777 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k2eA/info/1k2eA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k2eA/nostruct-align/1k2eA.t2k-thin90.a2m.gz, have 174700 columns in 729 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f5nA/nostruct-align/1f5nA.t2k-thin90.a2m.gz # 1f5nA.t2k-thin90.a2m with 62 sequences, total weight= 52.3417 avg weight= 0.844221 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f5nA/info/1f5nA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f5nA/nostruct-align/1f5nA.t2k-thin90.a2m.gz, have 175270 columns in 730 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uuzA/nostruct-align/1uuzA.t2k-thin90.a2m.gz # 1uuzA.t2k-thin90.a2m with 8 sequences, total weight= 5.42594 avg weight= 0.678242 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uuzA/info/1uuzA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uuzA/nostruct-align/1uuzA.t2k-thin90.a2m.gz, have 175399 columns in 731 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cex/nostruct-align/1cex.t2k-thin90.a2m.gz # 1cex.t2k-thin90.a2m with 32 sequences, total weight= 23.742 avg weight= 0.741937 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cex/info/1cex.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cex/nostruct-align/1cex.t2k-thin90.a2m.gz, have 175596 columns in 732 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pdo/nostruct-align/1pdo.t2k-thin90.a2m.gz # 1pdo.t2k-thin90.a2m with 113 sequences, total weight= 62.9723 avg weight= 0.557277 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30063 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pdo/info/1pdo.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pdo/nostruct-align/1pdo.t2k-thin90.a2m.gz, have 175725 columns in 733 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j98A/nostruct-align/1j98A.t2k-thin90.a2m.gz # 1j98A.t2k-thin90.a2m with 41 sequences, total weight= 6.69842 avg weight= 0.163376 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j98A/info/1j98A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j98A/nostruct-align/1j98A.t2k-thin90.a2m.gz, have 175879 columns in 734 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qqfA/nostruct-align/1qqfA.t2k-thin90.a2m.gz # 1qqfA.t2k-thin90.a2m with 104 sequences, total weight= 30.7089 avg weight= 0.295278 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qqfA/info/1qqfA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qqfA/nostruct-align/1qqfA.t2k-thin90.a2m.gz, have 176156 columns in 735 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gy7A/nostruct-align/1gy7A.t2k-thin90.a2m.gz # 1gy7A.t2k-thin90.a2m with 63 sequences, total weight= 30.642 avg weight= 0.48638 42 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gy7A/info/1gy7A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gy7A/nostruct-align/1gy7A.t2k-thin90.a2m.gz, have 176277 columns in 736 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a3aA/nostruct-align/1a3aA.t2k-thin90.a2m.gz # 1a3aA.t2k-thin90.a2m with 296 sequences, total weight= 296 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27317 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a3aA/info/1a3aA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1a/1a3aA/nostruct-align/1a3aA.t2k-thin90.a2m.gz, have 176422 columns in 737 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jidA/nostruct-align/1jidA.t2k-thin90.a2m.gz # 1jidA.t2k-thin90.a2m with 33 sequences, total weight= 19.059 avg weight= 0.577546 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jidA/info/1jidA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jidA/nostruct-align/1jidA.t2k-thin90.a2m.gz, have 176536 columns in 738 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kv7A/nostruct-align/1kv7A.t2k-thin90.a2m.gz # 1kv7A.t2k-thin90.a2m with 228 sequences, total weight= 228 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17978 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kv7A/info/1kv7A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kv7A/nostruct-align/1kv7A.t2k-thin90.a2m.gz, have 176999 columns in 739 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l2hA/nostruct-align/1l2hA.t2k-thin90.a2m.gz # 1l2hA.t2k-thin90.a2m with 53 sequences, total weight= 23.9166 avg weight= 0.451257 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l2hA/info/1l2hA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1l2hA/nostruct-align/1l2hA.t2k-thin90.a2m.gz, have 177143 columns in 740 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gvdA/nostruct-align/1gvdA.t2k-thin90.a2m.gz # 1gvdA.t2k-thin90.a2m with 560 sequences, total weight= 27.5104 avg weight= 0.0491257 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gvdA/info/1gvdA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gvdA/nostruct-align/1gvdA.t2k-thin90.a2m.gz, have 177195 columns in 741 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w1oA/nostruct-align/1w1oA.t2k-thin90.a2m.gz # 1w1oA.t2k-thin90.a2m with 650 sequences, total weight= 650 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.913531 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w1oA/info/1w1oA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w1oA/nostruct-align/1w1oA.t2k-thin90.a2m.gz, have 177674 columns in 742 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/4f/4fiv/nostruct-align/4fiv.t2k-thin90.a2m.gz # 4fiv.t2k-thin90.a2m with 338 sequences, total weight= 29.1248 avg weight= 0.0861681 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/4f/4fiv/info/4fiv.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/4f/4fiv/nostruct-align/4fiv.t2k-thin90.a2m.gz, have 177787 columns in 743 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1atzA/nostruct-align/1atzA.t2k-thin90.a2m.gz # 1atzA.t2k-thin90.a2m with 267 sequences, total weight= 267 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29331 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1atzA/info/1atzA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1a/1atzA/nostruct-align/1atzA.t2k-thin90.a2m.gz, have 177971 columns in 744 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kmtA/nostruct-align/1kmtA.t2k-thin90.a2m.gz # 1kmtA.t2k-thin90.a2m with 28 sequences, total weight= 10.6984 avg weight= 0.382085 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kmtA/info/1kmtA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kmtA/nostruct-align/1kmtA.t2k-thin90.a2m.gz, have 178109 columns in 745 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v9yA/nostruct-align/1v9yA.t2k-thin90.a2m.gz # 1v9yA.t2k-thin90.a2m with 1179 sequences, total weight= 1179 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.984587 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v9yA/info/1v9yA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v9yA/nostruct-align/1v9yA.t2k-thin90.a2m.gz, have 178212 columns in 746 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lj8A/nostruct-align/1lj8A.t2k-thin90.a2m.gz # 1lj8A.t2k-thin90.a2m with 89 sequences, total weight= 40.8981 avg weight= 0.45953 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lj8A/info/1lj8A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lj8A/nostruct-align/1lj8A.t2k-thin90.a2m.gz, have 178704 columns in 747 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1ji1A/nostruct-align/1ji1A.t2k-thin90.a2m.gz # 1ji1A.t2k-thin90.a2m with 279 sequences, total weight= 279 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.00014 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1ji1A/info/1ji1A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1ji1A/nostruct-align/1ji1A.t2k-thin90.a2m.gz, have 179341 columns in 748 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h6hA/nostruct-align/1h6hA.t2k-thin90.a2m.gz # 1h6hA.t2k-thin90.a2m with 70 sequences, total weight= 70 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07816 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h6hA/info/1h6hA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h6hA/nostruct-align/1h6hA.t2k-thin90.a2m.gz, have 179484 columns in 749 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ocyA/nostruct-align/1ocyA.t2k-thin90.a2m.gz # 1ocyA.t2k-thin90.a2m with 53 sequences, total weight= 53 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29149 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ocyA/info/1ocyA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ocyA/nostruct-align/1ocyA.t2k-thin90.a2m.gz, have 179682 columns in 750 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fobA/nostruct-align/1fobA.t2k-thin90.a2m.gz # 1fobA.t2k-thin90.a2m with 19 sequences, total weight= 8.75192 avg weight= 0.460628 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fobA/info/1fobA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fobA/nostruct-align/1fobA.t2k-thin90.a2m.gz, have 180016 columns in 751 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h2wA/nostruct-align/1h2wA.t2k-thin90.a2m.gz # 1h2wA.t2k-thin90.a2m with 248 sequences, total weight= 248 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.934819 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h2wA/info/1h2wA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h2wA/nostruct-align/1h2wA.t2k-thin90.a2m.gz, have 180726 columns in 752 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kwgA/nostruct-align/1kwgA.t2k-thin90.a2m.gz # 1kwgA.t2k-thin90.a2m with 86 sequences, total weight= 86 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22448 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kwgA/info/1kwgA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kwgA/nostruct-align/1kwgA.t2k-thin90.a2m.gz, have 181370 columns in 753 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dwkA/nostruct-align/1dwkA.t2k-thin90.a2m.gz # 1dwkA.t2k-thin90.a2m with 24 sequences, total weight= 6.53294 avg weight= 0.272206 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dwkA/info/1dwkA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dwkA/nostruct-align/1dwkA.t2k-thin90.a2m.gz, have 181526 columns in 754 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h2bA/nostruct-align/1h2bA.t2k-thin90.a2m.gz # 1h2bA.t2k-thin90.a2m with 1453 sequences, total weight= 1453 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22189 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h2bA/info/1h2bA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h2bA/nostruct-align/1h2bA.t2k-thin90.a2m.gz, have 181869 columns in 755 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uf5A/nostruct-align/1uf5A.t2k-thin90.a2m.gz # 1uf5A.t2k-thin90.a2m with 437 sequences, total weight= 437 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19416 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uf5A/info/1uf5A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uf5A/nostruct-align/1uf5A.t2k-thin90.a2m.gz, have 182172 columns in 756 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ijbA/nostruct-align/1ijbA.t2k-thin90.a2m.gz # 1ijbA.t2k-thin90.a2m with 333 sequences, total weight= 333 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23028 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ijbA/info/1ijbA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ijbA/nostruct-align/1ijbA.t2k-thin90.a2m.gz, have 182374 columns in 757 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lqvA/nostruct-align/1lqvA.t2k-thin90.a2m.gz # 1lqvA.t2k-thin90.a2m with 512 sequences, total weight= 40.6686 avg weight= 0.0794309 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lqvA/info/1lqvA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lqvA/nostruct-align/1lqvA.t2k-thin90.a2m.gz, have 182546 columns in 758 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dowA/nostruct-align/1dowA.t2k-thin90.a2m.gz # 1dowA.t2k-thin90.a2m with 20 sequences, total weight= 12.4493 avg weight= 0.622464 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dowA/info/1dowA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dowA/nostruct-align/1dowA.t2k-thin90.a2m.gz, have 182751 columns in 759 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cc8A/nostruct-align/1cc8A.t2k-thin90.a2m.gz # 1cc8A.t2k-thin90.a2m with 186 sequences, total weight= 60.8503 avg weight= 0.327152 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cc8A/info/1cc8A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cc8A/nostruct-align/1cc8A.t2k-thin90.a2m.gz, have 182823 columns in 760 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qf8A/nostruct-align/1qf8A.t2k-thin90.a2m.gz # 1qf8A.t2k-thin90.a2m with 28 sequences, total weight= 7.31921 avg weight= 0.2614 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qf8A/info/1qf8A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qf8A/nostruct-align/1qf8A.t2k-thin90.a2m.gz, have 182990 columns in 761 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gsoA/nostruct-align/1gsoA.t2k-thin90.a2m.gz # 1gsoA.t2k-thin90.a2m with 304 sequences, total weight= 304 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26652 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gsoA/info/1gsoA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gsoA/nostruct-align/1gsoA.t2k-thin90.a2m.gz, have 183409 columns in 762 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d0cA/nostruct-align/1d0cA.t2k-thin90.a2m.gz # 1d0cA.t2k-thin90.a2m with 34 sequences, total weight= 5.85016 avg weight= 0.172064 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d0cA/info/1d0cA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d0cA/nostruct-align/1d0cA.t2k-thin90.a2m.gz, have 183825 columns in 763 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gq6A/nostruct-align/1gq6A.t2k-thin90.a2m.gz # 1gq6A.t2k-thin90.a2m with 183 sequences, total weight= 158.745 avg weight= 0.867458 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30038 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gq6A/info/1gq6A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gq6A/nostruct-align/1gq6A.t2k-thin90.a2m.gz, have 184120 columns in 764 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oaa/nostruct-align/1oaa.t2k-thin90.a2m.gz # 1oaa.t2k-thin90.a2m with 1115 sequences, total weight= 1115 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25857 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oaa/info/1oaa.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oaa/nostruct-align/1oaa.t2k-thin90.a2m.gz, have 184379 columns in 765 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rqpA/nostruct-align/1rqpA.t2k-thin90.a2m.gz # 1rqpA.t2k-thin90.a2m with 41 sequences, total weight= 17.0549 avg weight= 0.415972 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rqpA/info/1rqpA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rqpA/nostruct-align/1rqpA.t2k-thin90.a2m.gz, have 184670 columns in 766 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/4u/4uagA/nostruct-align/4uagA.t2k-thin90.a2m.gz # 4uagA.t2k-thin90.a2m with 234 sequences, total weight= 234 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15262 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/4u/4uagA/info/4uagA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/4u/4uagA/nostruct-align/4uagA.t2k-thin90.a2m.gz, have 185099 columns in 767 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vpt/nostruct-align/1vpt.t2k-thin90.a2m.gz # 1vpt.t2k-thin90.a2m with 12 sequences, total weight= 7.48844 avg weight= 0.624036 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vpt/info/1vpt.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vpt/nostruct-align/1vpt.t2k-thin90.a2m.gz, have 185390 columns in 768 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p4cA/nostruct-align/1p4cA.t2k-thin90.a2m.gz # 1p4cA.t2k-thin90.a2m with 448 sequences, total weight= 448 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2228 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p4cA/info/1p4cA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p4cA/nostruct-align/1p4cA.t2k-thin90.a2m.gz, have 185743 columns in 769 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l9xA/nostruct-align/1l9xA.t2k-thin90.a2m.gz # 1l9xA.t2k-thin90.a2m with 193 sequences, total weight= 162.188 avg weight= 0.840352 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l9xA/info/1l9xA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1l9xA/nostruct-align/1l9xA.t2k-thin90.a2m.gz, have 186031 columns in 770 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n71A/nostruct-align/1n71A.t2k-thin90.a2m.gz # 1n71A.t2k-thin90.a2m with 147 sequences, total weight= 147 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25876 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n71A/info/1n71A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n71A/nostruct-align/1n71A.t2k-thin90.a2m.gz, have 186211 columns in 771 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a7s/nostruct-align/1a7s.t2k-thin90.a2m.gz # 1a7s.t2k-thin90.a2m with 1515 sequences, total weight= 300.194 avg weight= 0.198148 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32001 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a7s/info/1a7s.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1a/1a7s/nostruct-align/1a7s.t2k-thin90.a2m.gz, have 186432 columns in 772 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p5fA/nostruct-align/1p5fA.t2k-thin90.a2m.gz # 1p5fA.t2k-thin90.a2m with 325 sequences, total weight= 325 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24241 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p5fA/info/1p5fA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p5fA/nostruct-align/1p5fA.t2k-thin90.a2m.gz, have 186618 columns in 773 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i58A/nostruct-align/1i58A.t2k-thin90.a2m.gz # 1i58A.t2k-thin90.a2m with 843 sequences, total weight= 843 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24546 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i58A/info/1i58A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i58A/nostruct-align/1i58A.t2k-thin90.a2m.gz, have 186807 columns in 774 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uujA/nostruct-align/1uujA.t2k-thin90.a2m.gz # 1uujA.t2k-thin90.a2m with 21 sequences, total weight= 8.55259 avg weight= 0.407266 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uujA/info/1uujA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uujA/nostruct-align/1uujA.t2k-thin90.a2m.gz, have 186883 columns in 775 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e0tA/nostruct-align/1e0tA.t2k-thin90.a2m.gz # 1e0tA.t2k-thin90.a2m with 263 sequences, total weight= 27.365 avg weight= 0.104049 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e0tA/info/1e0tA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e0tA/nostruct-align/1e0tA.t2k-thin90.a2m.gz, have 187329 columns in 776 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p0hA/nostruct-align/1p0hA.t2k-thin90.a2m.gz # 1p0hA.t2k-thin90.a2m with 272 sequences, total weight= 272 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05585 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p0hA/info/1p0hA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p0hA/nostruct-align/1p0hA.t2k-thin90.a2m.gz, have 187619 columns in 777 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1usmA/nostruct-align/1usmA.t2k-thin90.a2m.gz # 1usmA.t2k-thin90.a2m with 80 sequences, total weight= 20.0002 avg weight= 0.250003 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1usmA/info/1usmA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1usmA/nostruct-align/1usmA.t2k-thin90.a2m.gz, have 187696 columns in 778 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fr2B/nostruct-align/1fr2B.t2k-thin90.a2m.gz # 1fr2B.t2k-thin90.a2m with 14 sequences, total weight= 4.51977 avg weight= 0.322841 20 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fr2B/info/1fr2B.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fr2B/nostruct-align/1fr2B.t2k-thin90.a2m.gz, have 187827 columns in 779 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vdkA/nostruct-align/1vdkA.t2k-thin90.a2m.gz # 1vdkA.t2k-thin90.a2m with 1235 sequences, total weight= 238.293 avg weight= 0.19295 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31362 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vdkA/info/1vdkA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vdkA/nostruct-align/1vdkA.t2k-thin90.a2m.gz, have 188285 columns in 780 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2s/2sli/nostruct-align/2sli.t2k-thin90.a2m.gz # 2sli.t2k-thin90.a2m with 94 sequences, total weight= 94 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09036 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2s/2sli/info/2sli.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/2s/2sli/nostruct-align/2sli.t2k-thin90.a2m.gz, have 188964 columns in 781 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dz3A/nostruct-align/1dz3A.t2k-thin90.a2m.gz # 1dz3A.t2k-thin90.a2m with 1538 sequences, total weight= 1333.53 avg weight= 0.867053 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30385 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dz3A/info/1dz3A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dz3A/nostruct-align/1dz3A.t2k-thin90.a2m.gz, have 189087 columns in 782 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o2dA/nostruct-align/1o2dA.t2k-thin90.a2m.gz # 1o2dA.t2k-thin90.a2m with 268 sequences, total weight= 268 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26689 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o2dA/info/1o2dA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o2dA/nostruct-align/1o2dA.t2k-thin90.a2m.gz, have 189446 columns in 783 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1molA/nostruct-align/1molA.t2k-thin90.a2m.gz # 1molA.t2k-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.626348 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1molA/info/1molA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1molA/nostruct-align/1molA.t2k-thin90.a2m.gz, have 189540 columns in 784 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qs1A/nostruct-align/1qs1A.t2k-thin90.a2m.gz # 1qs1A.t2k-thin90.a2m with 25 sequences, total weight= 17.3671 avg weight= 0.694683 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qs1A/info/1qs1A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qs1A/nostruct-align/1qs1A.t2k-thin90.a2m.gz, have 189942 columns in 785 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h4gA/nostruct-align/1h4gA.t2k-thin90.a2m.gz # 1h4gA.t2k-thin90.a2m with 93 sequences, total weight= 11.449 avg weight= 0.123108 31 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h4gA/info/1h4gA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h4gA/nostruct-align/1h4gA.t2k-thin90.a2m.gz, have 190148 columns in 786 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m9xC/nostruct-align/1m9xC.t2k-thin90.a2m.gz # 1m9xC.t2k-thin90.a2m with 479 sequences, total weight= 19.8392 avg weight= 0.0414179 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m9xC/info/1m9xC.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m9xC/nostruct-align/1m9xC.t2k-thin90.a2m.gz, have 190294 columns in 787 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v8cA/nostruct-align/1v8cA.t2k-thin90.a2m.gz # 1v8cA.t2k-thin90.a2m with 107 sequences, total weight= 13.4683 avg weight= 0.125872 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v8cA/info/1v8cA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v8cA/nostruct-align/1v8cA.t2k-thin90.a2m.gz, have 190459 columns in 788 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p5zB/nostruct-align/1p5zB.t2k-thin90.a2m.gz # 1p5zB.t2k-thin90.a2m with 99 sequences, total weight= 99 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1353 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p5zB/info/1p5zB.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p5zB/nostruct-align/1p5zB.t2k-thin90.a2m.gz, have 190688 columns in 789 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1khxA/nostruct-align/1khxA.t2k-thin90.a2m.gz # 1khxA.t2k-thin90.a2m with 30 sequences, total weight= 14.2613 avg weight= 0.475378 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1khxA/info/1khxA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1khxA/nostruct-align/1khxA.t2k-thin90.a2m.gz, have 190891 columns in 790 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1st9A/nostruct-align/1st9A.t2k-thin90.a2m.gz # 1st9A.t2k-thin90.a2m with 1495 sequences, total weight= 1495 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17727 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1st9A/info/1st9A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1st9A/nostruct-align/1st9A.t2k-thin90.a2m.gz, have 191028 columns in 791 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mk4A/nostruct-align/1mk4A.t2k-thin90.a2m.gz # 1mk4A.t2k-thin90.a2m with 346 sequences, total weight= 346 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.936917 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mk4A/info/1mk4A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mk4A/nostruct-align/1mk4A.t2k-thin90.a2m.gz, have 191185 columns in 792 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f1eA/nostruct-align/1f1eA.t2k-thin90.a2m.gz # 1f1eA.t2k-thin90.a2m with 88 sequences, total weight= 29.1039 avg weight= 0.330726 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f1eA/info/1f1eA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f1eA/nostruct-align/1f1eA.t2k-thin90.a2m.gz, have 191336 columns in 793 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nh8A/nostruct-align/1nh8A.t2k-thin90.a2m.gz # 1nh8A.t2k-thin90.a2m with 90 sequences, total weight= 22.8084 avg weight= 0.253427 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nh8A/info/1nh8A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nh8A/nostruct-align/1nh8A.t2k-thin90.a2m.gz, have 191612 columns in 794 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ikpA/nostruct-align/1ikpA.t2k-thin90.a2m.gz # 1ikpA.t2k-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.624537 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ikpA/info/1ikpA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ikpA/nostruct-align/1ikpA.t2k-thin90.a2m.gz, have 192211 columns in 795 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1swxA/nostruct-align/1swxA.t2k-thin90.a2m.gz # 1swxA.t2k-thin90.a2m with 65 sequences, total weight= 40.7769 avg weight= 0.627338 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1swxA/info/1swxA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1swxA/nostruct-align/1swxA.t2k-thin90.a2m.gz, have 192409 columns in 796 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nlrA/nostruct-align/2nlrA.t2k-thin90.a2m.gz # 2nlrA.t2k-thin90.a2m with 45 sequences, total weight= 27.9667 avg weight= 0.621481 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nlrA/info/2nlrA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/2n/2nlrA/nostruct-align/2nlrA.t2k-thin90.a2m.gz, have 192631 columns in 797 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uebA/nostruct-align/1uebA.t2k-thin90.a2m.gz # 1uebA.t2k-thin90.a2m with 172 sequences, total weight= 21.4323 avg weight= 0.124606 43 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uebA/info/1uebA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uebA/nostruct-align/1uebA.t2k-thin90.a2m.gz, have 192815 columns in 798 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mgtA/nostruct-align/1mgtA.t2k-thin90.a2m.gz # 1mgtA.t2k-thin90.a2m with 230 sequences, total weight= 135.58 avg weight= 0.589479 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30131 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mgtA/info/1mgtA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mgtA/nostruct-align/1mgtA.t2k-thin90.a2m.gz, have 192984 columns in 799 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dytA/nostruct-align/1dytA.t2k-thin90.a2m.gz # 1dytA.t2k-thin90.a2m with 165 sequences, total weight= 24.5931 avg weight= 0.149049 37 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dytA/info/1dytA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dytA/nostruct-align/1dytA.t2k-thin90.a2m.gz, have 193117 columns in 800 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1me4A/nostruct-align/1me4A.t2k-thin90.a2m.gz # 1me4A.t2k-thin90.a2m with 572 sequences, total weight= 139.941 avg weight= 0.244653 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30459 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1me4A/info/1me4A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1me4A/nostruct-align/1me4A.t2k-thin90.a2m.gz, have 193332 columns in 801 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g6xA/nostruct-align/1g6xA.t2k-thin90.a2m.gz # 1g6xA.t2k-thin90.a2m with 217 sequences, total weight= 34.3004 avg weight= 0.158066 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g6xA/info/1g6xA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g6xA/nostruct-align/1g6xA.t2k-thin90.a2m.gz, have 193390 columns in 802 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iwlA/nostruct-align/1iwlA.t2k-thin90.a2m.gz # 1iwlA.t2k-thin90.a2m with 60 sequences, total weight= 60 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22274 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iwlA/info/1iwlA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iwlA/nostruct-align/1iwlA.t2k-thin90.a2m.gz, have 193567 columns in 803 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k2xA/nostruct-align/1k2xA.t2k-thin90.a2m.gz # 1k2xA.t2k-thin90.a2m with 73 sequences, total weight= 22.7572 avg weight= 0.311743 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k2xA/info/1k2xA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k2xA/nostruct-align/1k2xA.t2k-thin90.a2m.gz, have 193723 columns in 804 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jiwI/nostruct-align/1jiwI.t2k-thin90.a2m.gz # 1jiwI.t2k-thin90.a2m with 16 sequences, total weight= 8.67997 avg weight= 0.542498 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jiwI/info/1jiwI.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jiwI/nostruct-align/1jiwI.t2k-thin90.a2m.gz, have 193828 columns in 805 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ogiA/nostruct-align/1ogiA.t2k-thin90.a2m.gz # 1ogiA.t2k-thin90.a2m with 595 sequences, total weight= 595 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09316 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ogiA/info/1ogiA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ogiA/nostruct-align/1ogiA.t2k-thin90.a2m.gz, have 194123 columns in 806 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mf7A/nostruct-align/1mf7A.t2k-thin90.a2m.gz # 1mf7A.t2k-thin90.a2m with 392 sequences, total weight= 392 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15148 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mf7A/info/1mf7A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mf7A/nostruct-align/1mf7A.t2k-thin90.a2m.gz, have 194317 columns in 807 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jp4A/nostruct-align/1jp4A.t2k-thin90.a2m.gz # 1jp4A.t2k-thin90.a2m with 324 sequences, total weight= 324 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22047 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jp4A/info/1jp4A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jp4A/nostruct-align/1jp4A.t2k-thin90.a2m.gz, have 194619 columns in 808 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sjyA/nostruct-align/1sjyA.t2k-thin90.a2m.gz # 1sjyA.t2k-thin90.a2m with 1112 sequences, total weight= 1112 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14237 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sjyA/info/1sjyA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sjyA/nostruct-align/1sjyA.t2k-thin90.a2m.gz, have 194773 columns in 809 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1evyA/nostruct-align/1evyA.t2k-thin90.a2m.gz # 1evyA.t2k-thin90.a2m with 227 sequences, total weight= 78.2587 avg weight= 0.344752 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1evyA/info/1evyA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1evyA/nostruct-align/1evyA.t2k-thin90.a2m.gz, have 195119 columns in 810 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1snrA/nostruct-align/1snrA.t2k-thin90.a2m.gz # 1snrA.t2k-thin90.a2m with 287 sequences, total weight= 287 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29794 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1snrA/info/1snrA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1snrA/nostruct-align/1snrA.t2k-thin90.a2m.gz, have 195455 columns in 811 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nkgA/nostruct-align/1nkgA.t2k-thin90.a2m.gz # 1nkgA.t2k-thin90.a2m with 24 sequences, total weight= 13.7257 avg weight= 0.571903 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nkgA/info/1nkgA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nkgA/nostruct-align/1nkgA.t2k-thin90.a2m.gz, have 195963 columns in 812 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g12A/nostruct-align/1g12A.t2k-thin90.a2m.gz # 1g12A.t2k-thin90.a2m with 15 sequences, total weight= 9.12035 avg weight= 0.608024 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g12A/info/1g12A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g12A/nostruct-align/1g12A.t2k-thin90.a2m.gz, have 196130 columns in 813 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k3yA/nostruct-align/1k3yA.t2k-thin90.a2m.gz # 1k3yA.t2k-thin90.a2m with 519 sequences, total weight= 519 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19881 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k3yA/info/1k3yA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k3yA/nostruct-align/1k3yA.t2k-thin90.a2m.gz, have 196351 columns in 814 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1ng6A/nostruct-align/1ng6A.t2k-thin90.a2m.gz # 1ng6A.t2k-thin90.a2m with 74 sequences, total weight= 21.3911 avg weight= 0.289068 37 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1ng6A/info/1ng6A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1ng6A/nostruct-align/1ng6A.t2k-thin90.a2m.gz, have 196499 columns in 815 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1ftrA/nostruct-align/1ftrA.t2k-thin90.a2m.gz # 1ftrA.t2k-thin90.a2m with 14 sequences, total weight= 4.36422 avg weight= 0.31173 19 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1ftrA/info/1ftrA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1ftrA/nostruct-align/1ftrA.t2k-thin90.a2m.gz, have 196795 columns in 816 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1co6A/nostruct-align/1co6A.t2k-thin90.a2m.gz # 1co6A.t2k-thin90.a2m with 228 sequences, total weight= 49.1557 avg weight= 0.215595 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1co6A/info/1co6A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1c/1co6A/nostruct-align/1co6A.t2k-thin90.a2m.gz, have 196902 columns in 817 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nc5A/nostruct-align/1nc5A.t2k-thin90.a2m.gz # 1nc5A.t2k-thin90.a2m with 27 sequences, total weight= 24.7578 avg weight= 0.916956 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nc5A/info/1nc5A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nc5A/nostruct-align/1nc5A.t2k-thin90.a2m.gz, have 197265 columns in 818 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3n/3nul/nostruct-align/3nul.t2k-thin90.a2m.gz # 3nul.t2k-thin90.a2m with 77 sequences, total weight= 22.2295 avg weight= 0.288695 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3n/3nul/info/3nul.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/3n/3nul/nostruct-align/3nul.t2k-thin90.a2m.gz, have 197395 columns in 819 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qj4A/nostruct-align/1qj4A.t2k-thin90.a2m.gz # 1qj4A.t2k-thin90.a2m with 285 sequences, total weight= 285 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.923954 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qj4A/info/1qj4A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qj4A/nostruct-align/1qj4A.t2k-thin90.a2m.gz, have 197651 columns in 820 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g8mA/nostruct-align/1g8mA.t2k-thin90.a2m.gz # 1g8mA.t2k-thin90.a2m with 130 sequences, total weight= 13.3371 avg weight= 0.102593 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g8mA/info/1g8mA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g8mA/nostruct-align/1g8mA.t2k-thin90.a2m.gz, have 198241 columns in 821 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n8vA/nostruct-align/1n8vA.t2k-thin90.a2m.gz # 1n8vA.t2k-thin90.a2m with 38 sequences, total weight= 8.97313 avg weight= 0.236135 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n8vA/info/1n8vA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n8vA/nostruct-align/1n8vA.t2k-thin90.a2m.gz, have 198342 columns in 822 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o8bA/nostruct-align/1o8bA.t2k-thin90.a2m.gz # 1o8bA.t2k-thin90.a2m with 98 sequences, total weight= 14.6603 avg weight= 0.149595 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o8bA/info/1o8bA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o8bA/nostruct-align/1o8bA.t2k-thin90.a2m.gz, have 198510 columns in 823 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f1uA/nostruct-align/1f1uA.t2k-thin90.a2m.gz # 1f1uA.t2k-thin90.a2m with 282 sequences, total weight= 282 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1185 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f1uA/info/1f1uA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f1uA/nostruct-align/1f1uA.t2k-thin90.a2m.gz, have 198832 columns in 824 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tqjA/nostruct-align/1tqjA.t2k-thin90.a2m.gz # 1tqjA.t2k-thin90.a2m with 224 sequences, total weight= 24.5178 avg weight= 0.109454 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tqjA/info/1tqjA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tqjA/nostruct-align/1tqjA.t2k-thin90.a2m.gz, have 199049 columns in 825 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k5cA/nostruct-align/1k5cA.t2k-thin90.a2m.gz # 1k5cA.t2k-thin90.a2m with 243 sequences, total weight= 71.7 avg weight= 0.295062 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.301 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k5cA/info/1k5cA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k5cA/nostruct-align/1k5cA.t2k-thin90.a2m.gz, have 199382 columns in 826 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oneA/nostruct-align/1oneA.t2k-thin90.a2m.gz # 1oneA.t2k-thin90.a2m with 196 sequences, total weight= 24.2113 avg weight= 0.123527 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oneA/info/1oneA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oneA/nostruct-align/1oneA.t2k-thin90.a2m.gz, have 199818 columns in 827 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dj0A/nostruct-align/1dj0A.t2k-thin90.a2m.gz # 1dj0A.t2k-thin90.a2m with 177 sequences, total weight= 65.0734 avg weight= 0.367646 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30042 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dj0A/info/1dj0A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dj0A/nostruct-align/1dj0A.t2k-thin90.a2m.gz, have 200082 columns in 828 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q25A/nostruct-align/1q25A.t2k-thin90.a2m.gz # 1q25A.t2k-thin90.a2m with 76 sequences, total weight= 27.5979 avg weight= 0.363131 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q25A/info/1q25A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q25A/nostruct-align/1q25A.t2k-thin90.a2m.gz, have 200510 columns in 829 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gskA/nostruct-align/1gskA.t2k-thin90.a2m.gz # 1gskA.t2k-thin90.a2m with 252 sequences, total weight= 252 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17939 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gskA/info/1gskA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gskA/nostruct-align/1gskA.t2k-thin90.a2m.gz, have 201012 columns in 830 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j3aA/nostruct-align/1j3aA.t2k-thin90.a2m.gz # 1j3aA.t2k-thin90.a2m with 138 sequences, total weight= 33.5217 avg weight= 0.242911 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j3aA/info/1j3aA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j3aA/nostruct-align/1j3aA.t2k-thin90.a2m.gz, have 201141 columns in 831 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jy1A/nostruct-align/1jy1A.t2k-thin90.a2m.gz # 1jy1A.t2k-thin90.a2m with 17 sequences, total weight= 16.7591 avg weight= 0.985831 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jy1A/info/1jy1A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jy1A/nostruct-align/1jy1A.t2k-thin90.a2m.gz, have 201580 columns in 832 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i27A/nostruct-align/1i27A.t2k-thin90.a2m.gz # 1i27A.t2k-thin90.a2m with 6 sequences, total weight= 3.57596 avg weight= 0.595994 11 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i27A/info/1i27A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i27A/nostruct-align/1i27A.t2k-thin90.a2m.gz, have 201653 columns in 833 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tgsI/nostruct-align/1tgsI.t2k-thin90.a2m.gz # 1tgsI.t2k-thin90.a2m with 134 sequences, total weight= 45.755 avg weight= 0.341455 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tgsI/info/1tgsI.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tgsI/nostruct-align/1tgsI.t2k-thin90.a2m.gz, have 201709 columns in 834 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dgwA/nostruct-align/1dgwA.t2k-thin90.a2m.gz # 1dgwA.t2k-thin90.a2m with 144 sequences, total weight= 109.339 avg weight= 0.759296 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3004 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dgwA/info/1dgwA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dgwA/nostruct-align/1dgwA.t2k-thin90.a2m.gz, have 201887 columns in 835 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w50A/nostruct-align/1w50A.t2k-thin90.a2m.gz # 1w50A.t2k-thin90.a2m with 641 sequences, total weight= 641 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29848 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w50A/info/1w50A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w50A/nostruct-align/1w50A.t2k-thin90.a2m.gz, have 202264 columns in 836 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gx5A/nostruct-align/1gx5A.t2k-thin90.a2m.gz # 1gx5A.t2k-thin90.a2m with 143 sequences, total weight= 41.7708 avg weight= 0.292103 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gx5A/info/1gx5A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gx5A/nostruct-align/1gx5A.t2k-thin90.a2m.gz, have 202794 columns in 837 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hztA/nostruct-align/1hztA.t2k-thin90.a2m.gz # 1hztA.t2k-thin90.a2m with 247 sequences, total weight= 173.95 avg weight= 0.704251 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30035 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hztA/info/1hztA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hztA/nostruct-align/1hztA.t2k-thin90.a2m.gz, have 202947 columns in 838 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1owlA/nostruct-align/1owlA.t2k-thin90.a2m.gz # 1owlA.t2k-thin90.a2m with 874 sequences, total weight= 874 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27323 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1owlA/info/1owlA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1owlA/nostruct-align/1owlA.t2k-thin90.a2m.gz, have 203420 columns in 839 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fpoA/nostruct-align/1fpoA.t2k-thin90.a2m.gz # 1fpoA.t2k-thin90.a2m with 271 sequences, total weight= 234.691 avg weight= 0.866017 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3006 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fpoA/info/1fpoA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fpoA/nostruct-align/1fpoA.t2k-thin90.a2m.gz, have 203591 columns in 840 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rrmA/nostruct-align/1rrmA.t2k-thin90.a2m.gz # 1rrmA.t2k-thin90.a2m with 438 sequences, total weight= 438 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2954 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rrmA/info/1rrmA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rrmA/nostruct-align/1rrmA.t2k-thin90.a2m.gz, have 203976 columns in 841 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qsaA/nostruct-align/1qsaA.t2k-thin90.a2m.gz # 1qsaA.t2k-thin90.a2m with 271 sequences, total weight= 271 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10587 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qsaA/info/1qsaA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qsaA/nostruct-align/1qsaA.t2k-thin90.a2m.gz, have 204594 columns in 842 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ohlA/nostruct-align/1ohlA.t2k-thin90.a2m.gz # 1ohlA.t2k-thin90.a2m with 117 sequences, total weight= 8.48187 avg weight= 0.0724946 31 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ohlA/info/1ohlA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ohlA/nostruct-align/1ohlA.t2k-thin90.a2m.gz, have 204934 columns in 843 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oygA/nostruct-align/1oygA.t2k-thin90.a2m.gz # 1oygA.t2k-thin90.a2m with 26 sequences, total weight= 11.4332 avg weight= 0.439738 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oygA/info/1oygA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oygA/nostruct-align/1oygA.t2k-thin90.a2m.gz, have 205374 columns in 844 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1khcA/nostruct-align/1khcA.t2k-thin90.a2m.gz # 1khcA.t2k-thin90.a2m with 61 sequences, total weight= 61 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16088 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1khcA/info/1khcA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1khcA/nostruct-align/1khcA.t2k-thin90.a2m.gz, have 205509 columns in 845 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nlqA/nostruct-align/1nlqA.t2k-thin90.a2m.gz # 1nlqA.t2k-thin90.a2m with 16 sequences, total weight= 6.92879 avg weight= 0.433049 19 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nlqA/info/1nlqA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nlqA/nostruct-align/1nlqA.t2k-thin90.a2m.gz, have 205614 columns in 846 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b2pA/nostruct-align/1b2pA.t2k-thin90.a2m.gz # 1b2pA.t2k-thin90.a2m with 129 sequences, total weight= 41.2302 avg weight= 0.319614 41 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b2pA/info/1b2pA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1b/1b2pA/nostruct-align/1b2pA.t2k-thin90.a2m.gz, have 205733 columns in 847 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ugpA/nostruct-align/1ugpA.t2k-thin90.a2m.gz # 1ugpA.t2k-thin90.a2m with 28 sequences, total weight= 6.99964 avg weight= 0.249987 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ugpA/info/1ugpA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ugpA/nostruct-align/1ugpA.t2k-thin90.a2m.gz, have 205936 columns in 848 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o8xA/nostruct-align/1o8xA.t2k-thin90.a2m.gz # 1o8xA.t2k-thin90.a2m with 370 sequences, total weight= 370 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19091 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o8xA/info/1o8xA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o8xA/nostruct-align/1o8xA.t2k-thin90.a2m.gz, have 206079 columns in 849 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nulA/nostruct-align/1nulA.t2k-thin90.a2m.gz # 1nulA.t2k-thin90.a2m with 331 sequences, total weight= 309.96 avg weight= 0.936435 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30036 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nulA/info/1nulA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nulA/nostruct-align/1nulA.t2k-thin90.a2m.gz, have 206221 columns in 850 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lugA/nostruct-align/1lugA.t2k-thin90.a2m.gz # 1lugA.t2k-thin90.a2m with 162 sequences, total weight= 93.7 avg weight= 0.578395 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30082 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lugA/info/1lugA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lugA/nostruct-align/1lugA.t2k-thin90.a2m.gz, have 206480 columns in 851 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tca/nostruct-align/1tca.t2k-thin90.a2m.gz # 1tca.t2k-thin90.a2m with 32 sequences, total weight= 32 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22918 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tca/info/1tca.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tca/nostruct-align/1tca.t2k-thin90.a2m.gz, have 206797 columns in 852 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1behA/nostruct-align/1behA.t2k-thin90.a2m.gz # 1behA.t2k-thin90.a2m with 124 sequences, total weight= 60.7414 avg weight= 0.48985 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1behA/info/1behA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1b/1behA/nostruct-align/1behA.t2k-thin90.a2m.gz, have 206981 columns in 853 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oaiA/nostruct-align/1oaiA.t2k-thin90.a2m.gz # 1oaiA.t2k-thin90.a2m with 11 sequences, total weight= 7.01955 avg weight= 0.638141 19 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oaiA/info/1oaiA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oaiA/nostruct-align/1oaiA.t2k-thin90.a2m.gz, have 207040 columns in 854 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sgwA/nostruct-align/1sgwA.t2k-thin90.a2m.gz # 1sgwA.t2k-thin90.a2m with 13637 sequences, total weight= 10739.3 avg weight= 0.78751 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30823 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sgwA/info/1sgwA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sgwA/nostruct-align/1sgwA.t2k-thin90.a2m.gz, have 207240 columns in 855 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nkiA/nostruct-align/1nkiA.t2k-thin90.a2m.gz # 1nkiA.t2k-thin90.a2m with 622 sequences, total weight= 622 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07893 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nkiA/info/1nkiA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nkiA/nostruct-align/1nkiA.t2k-thin90.a2m.gz, have 207374 columns in 856 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rv9A/nostruct-align/1rv9A.t2k-thin90.a2m.gz # 1rv9A.t2k-thin90.a2m with 135 sequences, total weight= 35.874 avg weight= 0.265733 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rv9A/info/1rv9A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rv9A/nostruct-align/1rv9A.t2k-thin90.a2m.gz, have 207616 columns in 857 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v58A/nostruct-align/1v58A.t2k-thin90.a2m.gz # 1v58A.t2k-thin90.a2m with 127 sequences, total weight= 127 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15683 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v58A/info/1v58A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v58A/nostruct-align/1v58A.t2k-thin90.a2m.gz, have 207845 columns in 858 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kllA/nostruct-align/1kllA.t2k-thin90.a2m.gz # 1kllA.t2k-thin90.a2m with 225 sequences, total weight= 225 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01409 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kllA/info/1kllA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kllA/nostruct-align/1kllA.t2k-thin90.a2m.gz, have 207973 columns in 859 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u4gA/nostruct-align/1u4gA.t2k-thin90.a2m.gz # 1u4gA.t2k-thin90.a2m with 109 sequences, total weight= 53.3252 avg weight= 0.489222 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u4gA/info/1u4gA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1u4gA/nostruct-align/1u4gA.t2k-thin90.a2m.gz, have 208271 columns in 860 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1roaA/nostruct-align/1roaA.t2k-thin90.a2m.gz # 1roaA.t2k-thin90.a2m with 145 sequences, total weight= 103.733 avg weight= 0.715399 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30053 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1roaA/info/1roaA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1roaA/nostruct-align/1roaA.t2k-thin90.a2m.gz, have 208382 columns in 861 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1ctf/nostruct-align/1ctf.t2k-thin90.a2m.gz # 1ctf.t2k-thin90.a2m with 152 sequences, total weight= 7.64956 avg weight= 0.0503261 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1ctf/info/1ctf.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1c/1ctf/nostruct-align/1ctf.t2k-thin90.a2m.gz, have 208450 columns in 862 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gai/nostruct-align/1gai.t2k-thin90.a2m.gz # 1gai.t2k-thin90.a2m with 54 sequences, total weight= 49.1124 avg weight= 0.909488 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gai/info/1gai.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gai/nostruct-align/1gai.t2k-thin90.a2m.gz, have 208922 columns in 863 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jsdB/nostruct-align/1jsdB.t2k-thin90.a2m.gz # 1jsdB.t2k-thin90.a2m with 18 sequences, total weight= 3.74919 avg weight= 0.208288 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jsdB/info/1jsdB.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jsdB/nostruct-align/1jsdB.t2k-thin90.a2m.gz, have 209082 columns in 864 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2p/2pth/nostruct-align/2pth.t2k-thin90.a2m.gz # 2pth.t2k-thin90.a2m with 134 sequences, total weight= 19.7092 avg weight= 0.147084 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2p/2pth/info/2pth.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/2p/2pth/nostruct-align/2pth.t2k-thin90.a2m.gz, have 209275 columns in 865 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e9gA/nostruct-align/1e9gA.t2k-thin90.a2m.gz # 1e9gA.t2k-thin90.a2m with 139 sequences, total weight= 27.9031 avg weight= 0.200742 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e9gA/info/1e9gA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e9gA/nostruct-align/1e9gA.t2k-thin90.a2m.gz, have 209559 columns in 866 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lucA/nostruct-align/1lucA.t2k-thin90.a2m.gz # 1lucA.t2k-thin90.a2m with 272 sequences, total weight= 272 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08065 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lucA/info/1lucA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lucA/nostruct-align/1lucA.t2k-thin90.a2m.gz, have 209885 columns in 867 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sg6A/nostruct-align/1sg6A.t2k-thin90.a2m.gz # 1sg6A.t2k-thin90.a2m with 279 sequences, total weight= 255.168 avg weight= 0.914579 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30048 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sg6A/info/1sg6A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sg6A/nostruct-align/1sg6A.t2k-thin90.a2m.gz, have 210262 columns in 868 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s5aA/nostruct-align/1s5aA.t2k-thin90.a2m.gz # 1s5aA.t2k-thin90.a2m with 45 sequences, total weight= 45 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05894 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s5aA/info/1s5aA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s5aA/nostruct-align/1s5aA.t2k-thin90.a2m.gz, have 210401 columns in 869 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h1nA/nostruct-align/1h1nA.t2k-thin90.a2m.gz # 1h1nA.t2k-thin90.a2m with 126 sequences, total weight= 126 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10131 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h1nA/info/1h1nA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h1nA/nostruct-align/1h1nA.t2k-thin90.a2m.gz, have 210706 columns in 870 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gpiA/nostruct-align/1gpiA.t2k-thin90.a2m.gz # 1gpiA.t2k-thin90.a2m with 54 sequences, total weight= 6.46478 avg weight= 0.119718 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gpiA/info/1gpiA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gpiA/nostruct-align/1gpiA.t2k-thin90.a2m.gz, have 211137 columns in 871 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1df4A/nostruct-align/1df4A.t2k-thin90.a2m.gz # 1df4A.t2k-thin90.a2m with 504 sequences, total weight= 8.7245 avg weight= 0.0173105 31 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1df4A/info/1df4A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1df4A/nostruct-align/1df4A.t2k-thin90.a2m.gz, have 211194 columns in 872 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hxn/nostruct-align/1hxn.t2k-thin90.a2m.gz # 1hxn.t2k-thin90.a2m with 127 sequences, total weight= 62.1953 avg weight= 0.489727 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hxn/info/1hxn.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hxn/nostruct-align/1hxn.t2k-thin90.a2m.gz, have 211404 columns in 873 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f8mA/nostruct-align/1f8mA.t2k-thin90.a2m.gz # 1f8mA.t2k-thin90.a2m with 153 sequences, total weight= 39.2484 avg weight= 0.256525 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f8mA/info/1f8mA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f8mA/nostruct-align/1f8mA.t2k-thin90.a2m.gz, have 211831 columns in 874 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1earA/nostruct-align/1earA.t2k-thin90.a2m.gz # 1earA.t2k-thin90.a2m with 60 sequences, total weight= 33.1714 avg weight= 0.552857 43 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1earA/info/1earA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1earA/nostruct-align/1earA.t2k-thin90.a2m.gz, have 211973 columns in 875 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h4rA/nostruct-align/1h4rA.t2k-thin90.a2m.gz # 1h4rA.t2k-thin90.a2m with 124 sequences, total weight= 124 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21333 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h4rA/info/1h4rA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h4rA/nostruct-align/1h4rA.t2k-thin90.a2m.gz, have 212267 columns in 876 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r9wA/nostruct-align/1r9wA.t2k-thin90.a2m.gz # 1r9wA.t2k-thin90.a2m with 83 sequences, total weight= 11.0144 avg weight= 0.132703 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r9wA/info/1r9wA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r9wA/nostruct-align/1r9wA.t2k-thin90.a2m.gz, have 212405 columns in 877 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qo7A/nostruct-align/1qo7A.t2k-thin90.a2m.gz # 1qo7A.t2k-thin90.a2m with 169 sequences, total weight= 169 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13996 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qo7A/info/1qo7A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qo7A/nostruct-align/1qo7A.t2k-thin90.a2m.gz, have 212790 columns in 878 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j30A/nostruct-align/1j30A.t2k-thin90.a2m.gz # 1j30A.t2k-thin90.a2m with 96 sequences, total weight= 94.0422 avg weight= 0.979607 43 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j30A/info/1j30A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j30A/nostruct-align/1j30A.t2k-thin90.a2m.gz, have 212931 columns in 879 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nzjA/nostruct-align/1nzjA.t2k-thin90.a2m.gz # 1nzjA.t2k-thin90.a2m with 671 sequences, total weight= 44.1933 avg weight= 0.0658619 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nzjA/info/1nzjA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nzjA/nostruct-align/1nzjA.t2k-thin90.a2m.gz, have 213204 columns in 880 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vimA/nostruct-align/1vimA.t2k-thin90.a2m.gz # 1vimA.t2k-thin90.a2m with 621 sequences, total weight= 621 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12825 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vimA/info/1vimA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vimA/nostruct-align/1vimA.t2k-thin90.a2m.gz, have 213396 columns in 881 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oa8A/nostruct-align/1oa8A.t2k-thin90.a2m.gz # 1oa8A.t2k-thin90.a2m with 9 sequences, total weight= 6.39758 avg weight= 0.710842 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oa8A/info/1oa8A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oa8A/nostruct-align/1oa8A.t2k-thin90.a2m.gz, have 213524 columns in 882 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m65A/nostruct-align/1m65A.t2k-thin90.a2m.gz # 1m65A.t2k-thin90.a2m with 126 sequences, total weight= 126 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15377 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m65A/info/1m65A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m65A/nostruct-align/1m65A.t2k-thin90.a2m.gz, have 213758 columns in 883 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e2kA/nostruct-align/1e2kA.t2k-thin90.a2m.gz # 1e2kA.t2k-thin90.a2m with 38 sequences, total weight= 26.756 avg weight= 0.704106 31 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e2kA/info/1e2kA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e2kA/nostruct-align/1e2kA.t2k-thin90.a2m.gz, have 214066 columns in 884 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eyeA/nostruct-align/1eyeA.t2k-thin90.a2m.gz # 1eyeA.t2k-thin90.a2m with 160 sequences, total weight= 28.5413 avg weight= 0.178383 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eyeA/info/1eyeA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1eyeA/nostruct-align/1eyeA.t2k-thin90.a2m.gz, have 214322 columns in 885 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cs6A/nostruct-align/1cs6A.t2k-thin90.a2m.gz # 1cs6A.t2k-thin90.a2m with 1532 sequences, total weight= 1532 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.848894 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cs6A/info/1cs6A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cs6A/nostruct-align/1cs6A.t2k-thin90.a2m.gz, have 214704 columns in 886 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u7gA/nostruct-align/1u7gA.t2k-thin90.a2m.gz # 1u7gA.t2k-thin90.a2m with 382 sequences, total weight= 56.3359 avg weight= 0.147476 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30046 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u7gA/info/1u7gA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1u7gA/nostruct-align/1u7gA.t2k-thin90.a2m.gz, have 215087 columns in 887 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kaeA/nostruct-align/1kaeA.t2k-thin90.a2m.gz # 1kaeA.t2k-thin90.a2m with 124 sequences, total weight= 13.4995 avg weight= 0.108867 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kaeA/info/1kaeA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kaeA/nostruct-align/1kaeA.t2k-thin90.a2m.gz, have 215521 columns in 888 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qftA/nostruct-align/1qftA.t2k-thin90.a2m.gz # 1qftA.t2k-thin90.a2m with 10 sequences, total weight= 10 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11289 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qftA/info/1qftA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qftA/nostruct-align/1qftA.t2k-thin90.a2m.gz, have 215696 columns in 889 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g8aA/nostruct-align/1g8aA.t2k-thin90.a2m.gz # 1g8aA.t2k-thin90.a2m with 204 sequences, total weight= 204 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1991 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g8aA/info/1g8aA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g8aA/nostruct-align/1g8aA.t2k-thin90.a2m.gz, have 215923 columns in 890 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dtdB/nostruct-align/1dtdB.t2k-thin90.a2m.gz # 1dtdB.t2k-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.675221 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dtdB/info/1dtdB.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dtdB/nostruct-align/1dtdB.t2k-thin90.a2m.gz, have 215984 columns in 891 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1inlA/nostruct-align/1inlA.t2k-thin90.a2m.gz # 1inlA.t2k-thin90.a2m with 200 sequences, total weight= 200 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18361 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1inlA/info/1inlA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1inlA/nostruct-align/1inlA.t2k-thin90.a2m.gz, have 216269 columns in 892 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q5zA/nostruct-align/1q5zA.t2k-thin90.a2m.gz # 1q5zA.t2k-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.588933 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q5zA/info/1q5zA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q5zA/nostruct-align/1q5zA.t2k-thin90.a2m.gz, have 216414 columns in 893 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cxqA/nostruct-align/1cxqA.t2k-thin90.a2m.gz # 1cxqA.t2k-thin90.a2m with 358 sequences, total weight= 358 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16125 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cxqA/info/1cxqA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cxqA/nostruct-align/1cxqA.t2k-thin90.a2m.gz, have 216557 columns in 894 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1itxA/nostruct-align/1itxA.t2k-thin90.a2m.gz # 1itxA.t2k-thin90.a2m with 295 sequences, total weight= 295 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13608 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1itxA/info/1itxA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1itxA/nostruct-align/1itxA.t2k-thin90.a2m.gz, have 216976 columns in 895 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o97D/nostruct-align/1o97D.t2k-thin90.a2m.gz # 1o97D.t2k-thin90.a2m with 143 sequences, total weight= 28.5861 avg weight= 0.199903 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o97D/info/1o97D.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o97D/nostruct-align/1o97D.t2k-thin90.a2m.gz, have 217291 columns in 896 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/4e/4eugA/nostruct-align/4eugA.t2k-thin90.a2m.gz # 4eugA.t2k-thin90.a2m with 154 sequences, total weight= 22.6815 avg weight= 0.147283 43 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/4e/4eugA/info/4eugA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/4e/4eugA/nostruct-align/4eugA.t2k-thin90.a2m.gz, have 217516 columns in 897 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pfbA/nostruct-align/1pfbA.t2k-thin90.a2m.gz # 1pfbA.t2k-thin90.a2m with 87 sequences, total weight= 25.8579 avg weight= 0.297218 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pfbA/info/1pfbA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pfbA/nostruct-align/1pfbA.t2k-thin90.a2m.gz, have 217571 columns in 898 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rjdA/nostruct-align/1rjdA.t2k-thin90.a2m.gz # 1rjdA.t2k-thin90.a2m with 41 sequences, total weight= 41 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26921 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rjdA/info/1rjdA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rjdA/nostruct-align/1rjdA.t2k-thin90.a2m.gz, have 217899 columns in 899 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vhwA/nostruct-align/1vhwA.t2k-thin90.a2m.gz # 1vhwA.t2k-thin90.a2m with 207 sequences, total weight= 207 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24044 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vhwA/info/1vhwA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vhwA/nostruct-align/1vhwA.t2k-thin90.a2m.gz, have 218136 columns in 900 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pwbA/nostruct-align/1pwbA.t2k-thin90.a2m.gz # 1pwbA.t2k-thin90.a2m with 547 sequences, total weight= 547 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09407 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pwbA/info/1pwbA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pwbA/nostruct-align/1pwbA.t2k-thin90.a2m.gz, have 218287 columns in 901 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1irdB/nostruct-align/1irdB.t2k-thin90.a2m.gz # 1irdB.t2k-thin90.a2m with 467 sequences, total weight= 77.9517 avg weight= 0.16692 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30262 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1irdB/info/1irdB.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1irdB/nostruct-align/1irdB.t2k-thin90.a2m.gz, have 218433 columns in 902 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rylA/nostruct-align/1rylA.t2k-thin90.a2m.gz # 1rylA.t2k-thin90.a2m with 11 sequences, total weight= 11 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22321 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rylA/info/1rylA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rylA/nostruct-align/1rylA.t2k-thin90.a2m.gz, have 218590 columns in 903 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sx5A/nostruct-align/1sx5A.t2k-thin90.a2m.gz # 1sx5A.t2k-thin90.a2m with 3 sequences, total weight= 3 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13992 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sx5A/info/1sx5A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sx5A/nostruct-align/1sx5A.t2k-thin90.a2m.gz, have 218834 columns in 904 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ut1A/nostruct-align/1ut1A.t2k-thin90.a2m.gz # 1ut1A.t2k-thin90.a2m with 8 sequences, total weight= 5.02289 avg weight= 0.627861 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ut1A/info/1ut1A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ut1A/nostruct-align/1ut1A.t2k-thin90.a2m.gz, have 218974 columns in 905 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mr7A/nostruct-align/1mr7A.t2k-thin90.a2m.gz # 1mr7A.t2k-thin90.a2m with 801 sequences, total weight= 801 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23684 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mr7A/info/1mr7A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mr7A/nostruct-align/1mr7A.t2k-thin90.a2m.gz, have 219177 columns in 906 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1twdA/nostruct-align/1twdA.t2k-thin90.a2m.gz # 1twdA.t2k-thin90.a2m with 64 sequences, total weight= 17.9559 avg weight= 0.280561 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1twdA/info/1twdA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1twdA/nostruct-align/1twdA.t2k-thin90.a2m.gz, have 219411 columns in 907 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2igd/nostruct-align/2igd.t2k-thin90.a2m.gz # 2igd.t2k-thin90.a2m with 9 sequences, total weight= 3.43718 avg weight= 0.381908 12 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2igd/info/2igd.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/2i/2igd/nostruct-align/2igd.t2k-thin90.a2m.gz, have 219472 columns in 908 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lc0A/nostruct-align/1lc0A.t2k-thin90.a2m.gz # 1lc0A.t2k-thin90.a2m with 271 sequences, total weight= 271 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09704 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lc0A/info/1lc0A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lc0A/nostruct-align/1lc0A.t2k-thin90.a2m.gz, have 219762 columns in 909 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1ka1A/nostruct-align/1ka1A.t2k-thin90.a2m.gz # 1ka1A.t2k-thin90.a2m with 330 sequences, total weight= 330 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17148 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1ka1A/info/1ka1A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1ka1A/nostruct-align/1ka1A.t2k-thin90.a2m.gz, have 220116 columns in 910 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ejdA/nostruct-align/1ejdA.t2k-thin90.a2m.gz # 1ejdA.t2k-thin90.a2m with 292 sequences, total weight= 59.2996 avg weight= 0.203081 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30077 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ejdA/info/1ejdA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ejdA/nostruct-align/1ejdA.t2k-thin90.a2m.gz, have 220535 columns in 911 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r89A/nostruct-align/1r89A.t2k-thin90.a2m.gz # 1r89A.t2k-thin90.a2m with 19 sequences, total weight= 11.3541 avg weight= 0.597583 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r89A/info/1r89A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r89A/nostruct-align/1r89A.t2k-thin90.a2m.gz, have 220972 columns in 912 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pq1A/nostruct-align/1pq1A.t2k-thin90.a2m.gz # 1pq1A.t2k-thin90.a2m with 53 sequences, total weight= 53 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22746 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pq1A/info/1pq1A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pq1A/nostruct-align/1pq1A.t2k-thin90.a2m.gz, have 221119 columns in 913 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ursA/nostruct-align/1ursA.t2k-thin90.a2m.gz # 1ursA.t2k-thin90.a2m with 380 sequences, total weight= 380 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.922988 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ursA/info/1ursA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ursA/nostruct-align/1ursA.t2k-thin90.a2m.gz, have 221485 columns in 914 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q35A/nostruct-align/1q35A.t2k-thin90.a2m.gz # 1q35A.t2k-thin90.a2m with 251 sequences, total weight= 251 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08248 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q35A/info/1q35A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q35A/nostruct-align/1q35A.t2k-thin90.a2m.gz, have 221802 columns in 915 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1psrA/nostruct-align/1psrA.t2k-thin90.a2m.gz # 1psrA.t2k-thin90.a2m with 201 sequences, total weight= 139.856 avg weight= 0.695801 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1psrA/info/1psrA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1psrA/nostruct-align/1psrA.t2k-thin90.a2m.gz, have 221902 columns in 916 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1md6A/nostruct-align/1md6A.t2k-thin90.a2m.gz # 1md6A.t2k-thin90.a2m with 57 sequences, total weight= 21.5647 avg weight= 0.378328 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1md6A/info/1md6A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1md6A/nostruct-align/1md6A.t2k-thin90.a2m.gz, have 222056 columns in 917 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1po5A/nostruct-align/1po5A.t2k-thin90.a2m.gz # 1po5A.t2k-thin90.a2m with 1945 sequences, total weight= 1945 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03624 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1po5A/info/1po5A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1po5A/nostruct-align/1po5A.t2k-thin90.a2m.gz, have 222521 columns in 918 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kzfA/nostruct-align/1kzfA.t2k-thin90.a2m.gz # 1kzfA.t2k-thin90.a2m with 58 sequences, total weight= 34.106 avg weight= 0.588034 43 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kzfA/info/1kzfA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kzfA/nostruct-align/1kzfA.t2k-thin90.a2m.gz, have 222719 columns in 919 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vhh/nostruct-align/1vhh.t2k-thin90.a2m.gz # 1vhh.t2k-thin90.a2m with 22 sequences, total weight= 3.63095 avg weight= 0.165043 15 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vhh/info/1vhh.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vhh/nostruct-align/1vhh.t2k-thin90.a2m.gz, have 222876 columns in 920 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g2bA/nostruct-align/1g2bA.t2k-thin90.a2m.gz # 1g2bA.t2k-thin90.a2m with 518 sequences, total weight= 82.2889 avg weight= 0.158859 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g2bA/info/1g2bA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g2bA/nostruct-align/1g2bA.t2k-thin90.a2m.gz, have 222938 columns in 921 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pwgA/nostruct-align/1pwgA.t2k-thin90.a2m.gz # 1pwgA.t2k-thin90.a2m with 487 sequences, total weight= 487 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02923 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pwgA/info/1pwgA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pwgA/nostruct-align/1pwgA.t2k-thin90.a2m.gz, have 223283 columns in 922 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jx6A/nostruct-align/1jx6A.t2k-thin90.a2m.gz # 1jx6A.t2k-thin90.a2m with 240 sequences, total weight= 240 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21574 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jx6A/info/1jx6A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jx6A/nostruct-align/1jx6A.t2k-thin90.a2m.gz, have 223621 columns in 923 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tqgA/nostruct-align/1tqgA.t2k-thin90.a2m.gz # 1tqgA.t2k-thin90.a2m with 219 sequences, total weight= 112.441 avg weight= 0.513429 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30067 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tqgA/info/1tqgA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tqgA/nostruct-align/1tqgA.t2k-thin90.a2m.gz, have 223726 columns in 924 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rvkA/nostruct-align/1rvkA.t2k-thin90.a2m.gz # 1rvkA.t2k-thin90.a2m with 347 sequences, total weight= 347 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24603 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rvkA/info/1rvkA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rvkA/nostruct-align/1rvkA.t2k-thin90.a2m.gz, have 224107 columns in 925 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f5vA/nostruct-align/1f5vA.t2k-thin90.a2m.gz # 1f5vA.t2k-thin90.a2m with 184 sequences, total weight= 180.972 avg weight= 0.983541 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f5vA/info/1f5vA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f5vA/nostruct-align/1f5vA.t2k-thin90.a2m.gz, have 224347 columns in 926 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eb6A/nostruct-align/1eb6A.t2k-thin90.a2m.gz # 1eb6A.t2k-thin90.a2m with 19 sequences, total weight= 14.824 avg weight= 0.780212 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eb6A/info/1eb6A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1eb6A/nostruct-align/1eb6A.t2k-thin90.a2m.gz, have 224524 columns in 927 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fcqA/nostruct-align/1fcqA.t2k-thin90.a2m.gz # 1fcqA.t2k-thin90.a2m with 29 sequences, total weight= 8.43378 avg weight= 0.29082 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fcqA/info/1fcqA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fcqA/nostruct-align/1fcqA.t2k-thin90.a2m.gz, have 224838 columns in 928 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ifc/nostruct-align/1ifc.t2k-thin90.a2m.gz # 1ifc.t2k-thin90.a2m with 126 sequences, total weight= 26.8527 avg weight= 0.213117 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ifc/info/1ifc.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ifc/nostruct-align/1ifc.t2k-thin90.a2m.gz, have 224969 columns in 929 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lxjA/nostruct-align/1lxjA.t2k-thin90.a2m.gz # 1lxjA.t2k-thin90.a2m with 43 sequences, total weight= 20.3459 avg weight= 0.473162 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lxjA/info/1lxjA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lxjA/nostruct-align/1lxjA.t2k-thin90.a2m.gz, have 225073 columns in 930 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54C/nostruct-align/1v54C.t2k-thin90.a2m.gz # 1v54C.t2k-thin90.a2m with 472 sequences, total weight= 62.1433 avg weight= 0.131659 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54C/info/1v54C.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v54C/nostruct-align/1v54C.t2k-thin90.a2m.gz, have 225332 columns in 931 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pbyB/nostruct-align/1pbyB.t2k-thin90.a2m.gz # 1pbyB.t2k-thin90.a2m with 112 sequences, total weight= 112 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04118 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pbyB/info/1pbyB.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pbyB/nostruct-align/1pbyB.t2k-thin90.a2m.gz, have 225669 columns in 932 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b3aA/nostruct-align/1b3aA.t2k-thin90.a2m.gz # 1b3aA.t2k-thin90.a2m with 180 sequences, total weight= 54.6432 avg weight= 0.303573 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b3aA/info/1b3aA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1b/1b3aA/nostruct-align/1b3aA.t2k-thin90.a2m.gz, have 225736 columns in 933 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vl2A/nostruct-align/1vl2A.t2k-thin90.a2m.gz # 1vl2A.t2k-thin90.a2m with 219 sequences, total weight= 43.739 avg weight= 0.199721 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vl2A/info/1vl2A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vl2A/nostruct-align/1vl2A.t2k-thin90.a2m.gz, have 226134 columns in 934 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pb7A/nostruct-align/1pb7A.t2k-thin90.a2m.gz # 1pb7A.t2k-thin90.a2m with 444 sequences, total weight= 444 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14405 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pb7A/info/1pb7A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pb7A/nostruct-align/1pb7A.t2k-thin90.a2m.gz, have 226415 columns in 935 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dqzA/nostruct-align/1dqzA.t2k-thin90.a2m.gz # 1dqzA.t2k-thin90.a2m with 110 sequences, total weight= 110 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22055 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dqzA/info/1dqzA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dqzA/nostruct-align/1dqzA.t2k-thin90.a2m.gz, have 226695 columns in 936 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lyvA/nostruct-align/1lyvA.t2k-thin90.a2m.gz # 1lyvA.t2k-thin90.a2m with 189 sequences, total weight= 94.1943 avg weight= 0.498383 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30078 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lyvA/info/1lyvA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lyvA/nostruct-align/1lyvA.t2k-thin90.a2m.gz, have 226978 columns in 937 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lb3A/nostruct-align/1lb3A.t2k-thin90.a2m.gz # 1lb3A.t2k-thin90.a2m with 157 sequences, total weight= 71.386 avg weight= 0.454688 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lb3A/info/1lb3A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lb3A/nostruct-align/1lb3A.t2k-thin90.a2m.gz, have 227145 columns in 938 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b8zA/nostruct-align/1b8zA.t2k-thin90.a2m.gz # 1b8zA.t2k-thin90.a2m with 263 sequences, total weight= 25.5385 avg weight= 0.0971046 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b8zA/info/1b8zA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1b/1b8zA/nostruct-align/1b8zA.t2k-thin90.a2m.gz, have 227212 columns in 939 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rkuA/nostruct-align/1rkuA.t2k-thin90.a2m.gz # 1rkuA.t2k-thin90.a2m with 174 sequences, total weight= 111.751 avg weight= 0.642246 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rkuA/info/1rkuA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rkuA/nostruct-align/1rkuA.t2k-thin90.a2m.gz, have 227418 columns in 940 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vjuA/nostruct-align/1vjuA.t2k-thin90.a2m.gz # 1vjuA.t2k-thin90.a2m with 356 sequences, total weight= 12.0155 avg weight= 0.0337515 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vjuA/info/1vjuA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vjuA/nostruct-align/1vjuA.t2k-thin90.a2m.gz, have 227709 columns in 941 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ogwA/nostruct-align/1ogwA.t2k-thin90.a2m.gz # 1ogwA.t2k-thin90.a2m with 304 sequences, total weight= 159.027 avg weight= 0.523115 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30299 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ogwA/info/1ogwA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ogwA/nostruct-align/1ogwA.t2k-thin90.a2m.gz, have 227785 columns in 942 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r1tA/nostruct-align/1r1tA.t2k-thin90.a2m.gz # 1r1tA.t2k-thin90.a2m with 614 sequences, total weight= 107.973 avg weight= 0.175852 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30049 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r1tA/info/1r1tA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r1tA/nostruct-align/1r1tA.t2k-thin90.a2m.gz, have 227883 columns in 943 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nnhA/nostruct-align/1nnhA.t2k-thin90.a2m.gz # 1nnhA.t2k-thin90.a2m with 472 sequences, total weight= 90.7804 avg weight= 0.192331 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30205 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nnhA/info/1nnhA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nnhA/nostruct-align/1nnhA.t2k-thin90.a2m.gz, have 228176 columns in 944 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uteA/nostruct-align/1uteA.t2k-thin90.a2m.gz # 1uteA.t2k-thin90.a2m with 134 sequences, total weight= 134 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.892057 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uteA/info/1uteA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uteA/nostruct-align/1uteA.t2k-thin90.a2m.gz, have 228478 columns in 945 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1ks8A/nostruct-align/1ks8A.t2k-thin90.a2m.gz # 1ks8A.t2k-thin90.a2m with 160 sequences, total weight= 48.2845 avg weight= 0.301778 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1ks8A/info/1ks8A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1ks8A/nostruct-align/1ks8A.t2k-thin90.a2m.gz, have 228911 columns in 946 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vkiA/nostruct-align/1vkiA.t2k-thin90.a2m.gz # 1vkiA.t2k-thin90.a2m with 50 sequences, total weight= 49.8649 avg weight= 0.997297 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vkiA/info/1vkiA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vkiA/nostruct-align/1vkiA.t2k-thin90.a2m.gz, have 229076 columns in 947 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ou8A/nostruct-align/1ou8A.t2k-thin90.a2m.gz # 1ou8A.t2k-thin90.a2m with 27 sequences, total weight= 7.19166 avg weight= 0.266358 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ou8A/info/1ou8A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ou8A/nostruct-align/1ou8A.t2k-thin90.a2m.gz, have 229182 columns in 948 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1ssxA/nostruct-align/1ssxA.t2k-thin90.a2m.gz # 1ssxA.t2k-thin90.a2m with 245 sequences, total weight= 160.622 avg weight= 0.655601 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30114 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1ssxA/info/1ssxA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1ssxA/nostruct-align/1ssxA.t2k-thin90.a2m.gz, have 229380 columns in 949 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j6oA/nostruct-align/1j6oA.t2k-thin90.a2m.gz # 1j6oA.t2k-thin90.a2m with 239 sequences, total weight= 121.745 avg weight= 0.509392 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3021 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j6oA/info/1j6oA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j6oA/nostruct-align/1j6oA.t2k-thin90.a2m.gz, have 229640 columns in 950 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fp2A/nostruct-align/1fp2A.t2k-thin90.a2m.gz # 1fp2A.t2k-thin90.a2m with 215 sequences, total weight= 215 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14267 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fp2A/info/1fp2A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fp2A/nostruct-align/1fp2A.t2k-thin90.a2m.gz, have 229985 columns in 951 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h4aX/nostruct-align/1h4aX.t2k-thin90.a2m.gz # 1h4aX.t2k-thin90.a2m with 90 sequences, total weight= 24.0921 avg weight= 0.267691 37 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h4aX/info/1h4aX.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h4aX/nostruct-align/1h4aX.t2k-thin90.a2m.gz, have 230158 columns in 952 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oywA/nostruct-align/1oywA.t2k-thin90.a2m.gz # 1oywA.t2k-thin90.a2m with 1703 sequences, total weight= 1703 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.96965 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oywA/info/1oywA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oywA/nostruct-align/1oywA.t2k-thin90.a2m.gz, have 230674 columns in 953 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mpgA/nostruct-align/1mpgA.t2k-thin90.a2m.gz # 1mpgA.t2k-thin90.a2m with 163 sequences, total weight= 163 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22802 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mpgA/info/1mpgA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mpgA/nostruct-align/1mpgA.t2k-thin90.a2m.gz, have 230956 columns in 954 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qwgA/nostruct-align/1qwgA.t2k-thin90.a2m.gz # 1qwgA.t2k-thin90.a2m with 12 sequences, total weight= 10.0278 avg weight= 0.835649 20 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qwgA/info/1qwgA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qwgA/nostruct-align/1qwgA.t2k-thin90.a2m.gz, have 231207 columns in 955 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v9fA/nostruct-align/1v9fA.t2k-thin90.a2m.gz # 1v9fA.t2k-thin90.a2m with 559 sequences, total weight= 326.21 avg weight= 0.58356 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30326 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v9fA/info/1v9fA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v9fA/nostruct-align/1v9fA.t2k-thin90.a2m.gz, have 231457 columns in 956 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f7lA/nostruct-align/1f7lA.t2k-thin90.a2m.gz # 1f7lA.t2k-thin90.a2m with 132 sequences, total weight= 72.1113 avg weight= 0.546298 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30035 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f7lA/info/1f7lA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f7lA/nostruct-align/1f7lA.t2k-thin90.a2m.gz, have 231575 columns in 957 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ey4A/nostruct-align/1ey4A.t2k-thin90.a2m.gz # 1ey4A.t2k-thin90.a2m with 160 sequences, total weight= 160 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26681 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ey4A/info/1ey4A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ey4A/nostruct-align/1ey4A.t2k-thin90.a2m.gz, have 231711 columns in 958 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1os6A/nostruct-align/1os6A.t2k-thin90.a2m.gz # 1os6A.t2k-thin90.a2m with 29 sequences, total weight= 20.5228 avg weight= 0.707683 31 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1os6A/info/1os6A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1os6A/nostruct-align/1os6A.t2k-thin90.a2m.gz, have 231782 columns in 959 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gvzA/nostruct-align/1gvzA.t2k-thin90.a2m.gz # 1gvzA.t2k-thin90.a2m with 1374 sequences, total weight= 1230.99 avg weight= 0.895919 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30247 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gvzA/info/1gvzA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gvzA/nostruct-align/1gvzA.t2k-thin90.a2m.gz, have 232019 columns in 960 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i1wA/nostruct-align/1i1wA.t2k-thin90.a2m.gz # 1i1wA.t2k-thin90.a2m with 146 sequences, total weight= 59.2007 avg weight= 0.405484 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i1wA/info/1i1wA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i1wA/nostruct-align/1i1wA.t2k-thin90.a2m.gz, have 232322 columns in 961 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1ten/nostruct-align/1ten.t2k-thin90.a2m.gz # 1ten.t2k-thin90.a2m with 709 sequences, total weight= 709 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08666 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1ten/info/1ten.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1ten/nostruct-align/1ten.t2k-thin90.a2m.gz, have 232411 columns in 962 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gvfA/nostruct-align/1gvfA.t2k-thin90.a2m.gz # 1gvfA.t2k-thin90.a2m with 165 sequences, total weight= 18.1771 avg weight= 0.110164 41 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gvfA/info/1gvfA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gvfA/nostruct-align/1gvfA.t2k-thin90.a2m.gz, have 232684 columns in 963 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mh1/nostruct-align/1mh1.t2k-thin90.a2m.gz # 1mh1.t2k-thin90.a2m with 633 sequences, total weight= 597.469 avg weight= 0.943869 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30101 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mh1/info/1mh1.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mh1/nostruct-align/1mh1.t2k-thin90.a2m.gz, have 232867 columns in 964 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gtkA/nostruct-align/1gtkA.t2k-thin90.a2m.gz # 1gtkA.t2k-thin90.a2m with 113 sequences, total weight= 17.045 avg weight= 0.150841 41 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gtkA/info/1gtkA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gtkA/nostruct-align/1gtkA.t2k-thin90.a2m.gz, have 233161 columns in 965 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pvmA/nostruct-align/1pvmA.t2k-thin90.a2m.gz # 1pvmA.t2k-thin90.a2m with 909 sequences, total weight= 909 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21109 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pvmA/info/1pvmA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pvmA/nostruct-align/1pvmA.t2k-thin90.a2m.gz, have 233339 columns in 966 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hbnA/nostruct-align/1hbnA.t2k-thin90.a2m.gz # 1hbnA.t2k-thin90.a2m with 51 sequences, total weight= 5.11719 avg weight= 0.100337 15 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hbnA/info/1hbnA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hbnA/nostruct-align/1hbnA.t2k-thin90.a2m.gz, have 233886 columns in 967 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1deuA/nostruct-align/1deuA.t2k-thin90.a2m.gz # 1deuA.t2k-thin90.a2m with 421 sequences, total weight= 121.728 avg weight= 0.289139 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30206 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1deuA/info/1deuA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1deuA/nostruct-align/1deuA.t2k-thin90.a2m.gz, have 234161 columns in 968 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i9zA/nostruct-align/1i9zA.t2k-thin90.a2m.gz # 1i9zA.t2k-thin90.a2m with 77 sequences, total weight= 67.2966 avg weight= 0.873982 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i9zA/info/1i9zA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i9zA/nostruct-align/1i9zA.t2k-thin90.a2m.gz, have 234497 columns in 969 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eexB/nostruct-align/1eexB.t2k-thin90.a2m.gz # 1eexB.t2k-thin90.a2m with 14 sequences, total weight= 7.55162 avg weight= 0.539401 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eexB/info/1eexB.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1eexB/nostruct-align/1eexB.t2k-thin90.a2m.gz, have 234675 columns in 970 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h16A/nostruct-align/1h16A.t2k-thin90.a2m.gz # 1h16A.t2k-thin90.a2m with 67 sequences, total weight= 33.1921 avg weight= 0.495404 37 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h16A/info/1h16A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h16A/nostruct-align/1h16A.t2k-thin90.a2m.gz, have 235434 columns in 971 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m0kA/nostruct-align/1m0kA.t2k-thin90.a2m.gz # 1m0kA.t2k-thin90.a2m with 44 sequences, total weight= 27.9711 avg weight= 0.635708 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m0kA/info/1m0kA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m0kA/nostruct-align/1m0kA.t2k-thin90.a2m.gz, have 235656 columns in 972 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wkqA/nostruct-align/1wkqA.t2k-thin90.a2m.gz # 1wkqA.t2k-thin90.a2m with 465 sequences, total weight= 200.961 avg weight= 0.432174 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30325 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wkqA/info/1wkqA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wkqA/nostruct-align/1wkqA.t2k-thin90.a2m.gz, have 235814 columns in 973 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eexG/nostruct-align/1eexG.t2k-thin90.a2m.gz # 1eexG.t2k-thin90.a2m with 8 sequences, total weight= 3.51513 avg weight= 0.439391 13 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eexG/info/1eexG.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1eexG/nostruct-align/1eexG.t2k-thin90.a2m.gz, have 235951 columns in 974 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vhtA/nostruct-align/1vhtA.t2k-thin90.a2m.gz # 1vhtA.t2k-thin90.a2m with 200 sequences, total weight= 150.629 avg weight= 0.753143 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vhtA/info/1vhtA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vhtA/nostruct-align/1vhtA.t2k-thin90.a2m.gz, have 236159 columns in 975 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nrzA/nostruct-align/1nrzA.t2k-thin90.a2m.gz # 1nrzA.t2k-thin90.a2m with 65 sequences, total weight= 20.2959 avg weight= 0.312244 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nrzA/info/1nrzA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nrzA/nostruct-align/1nrzA.t2k-thin90.a2m.gz, have 236322 columns in 976 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m6pA/nostruct-align/1m6pA.t2k-thin90.a2m.gz # 1m6pA.t2k-thin90.a2m with 174 sequences, total weight= 71.2645 avg weight= 0.409566 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30056 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m6pA/info/1m6pA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m6pA/nostruct-align/1m6pA.t2k-thin90.a2m.gz, have 236468 columns in 977 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kfcA/nostruct-align/1kfcA.t2k-thin90.a2m.gz # 1kfcA.t2k-thin90.a2m with 219 sequences, total weight= 22.1329 avg weight= 0.101063 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kfcA/info/1kfcA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kfcA/nostruct-align/1kfcA.t2k-thin90.a2m.gz, have 236722 columns in 978 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1epxA/nostruct-align/1epxA.t2k-thin90.a2m.gz # 1epxA.t2k-thin90.a2m with 115 sequences, total weight= 15.662 avg weight= 0.136192 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1epxA/info/1epxA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1epxA/nostruct-align/1epxA.t2k-thin90.a2m.gz, have 237079 columns in 979 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i2tA/nostruct-align/1i2tA.t2k-thin90.a2m.gz # 1i2tA.t2k-thin90.a2m with 47 sequences, total weight= 7.45597 avg weight= 0.158638 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i2tA/info/1i2tA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i2tA/nostruct-align/1i2tA.t2k-thin90.a2m.gz, have 237140 columns in 980 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nnlA/nostruct-align/1nnlA.t2k-thin90.a2m.gz # 1nnlA.t2k-thin90.a2m with 252 sequences, total weight= 252 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06264 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nnlA/info/1nnlA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nnlA/nostruct-align/1nnlA.t2k-thin90.a2m.gz, have 237345 columns in 981 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54G/nostruct-align/1v54G.t2k-thin90.a2m.gz # 1v54G.t2k-thin90.a2m with 21 sequences, total weight= 7.66931 avg weight= 0.365205 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54G/info/1v54G.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v54G/nostruct-align/1v54G.t2k-thin90.a2m.gz, have 237429 columns in 982 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hw1A/nostruct-align/1hw1A.t2k-thin90.a2m.gz # 1hw1A.t2k-thin90.a2m with 387 sequences, total weight= 387 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08013 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hw1A/info/1hw1A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hw1A/nostruct-align/1hw1A.t2k-thin90.a2m.gz, have 237655 columns in 983 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1al3/nostruct-align/1al3.t2k-thin90.a2m.gz # 1al3.t2k-thin90.a2m with 898 sequences, total weight= 898 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02416 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1al3/info/1al3.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1a/1al3/nostruct-align/1al3.t2k-thin90.a2m.gz, have 237892 columns in 984 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w2yA/nostruct-align/1w2yA.t2k-thin90.a2m.gz # 1w2yA.t2k-thin90.a2m with 21 sequences, total weight= 20.1621 avg weight= 0.9601 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w2yA/info/1w2yA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w2yA/nostruct-align/1w2yA.t2k-thin90.a2m.gz, have 238118 columns in 985 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tx4A/nostruct-align/1tx4A.t2k-thin90.a2m.gz # 1tx4A.t2k-thin90.a2m with 149 sequences, total weight= 149 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22637 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tx4A/info/1tx4A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tx4A/nostruct-align/1tx4A.t2k-thin90.a2m.gz, have 238314 columns in 986 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fj2A/nostruct-align/1fj2A.t2k-thin90.a2m.gz # 1fj2A.t2k-thin90.a2m with 234 sequences, total weight= 234 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.934388 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fj2A/info/1fj2A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fj2A/nostruct-align/1fj2A.t2k-thin90.a2m.gz, have 238543 columns in 987 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w2wA/nostruct-align/1w2wA.t2k-thin90.a2m.gz # 1w2wA.t2k-thin90.a2m with 99 sequences, total weight= 22.7894 avg weight= 0.230196 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w2wA/info/1w2wA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w2wA/nostruct-align/1w2wA.t2k-thin90.a2m.gz, have 238754 columns in 988 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r0mA/nostruct-align/1r0mA.t2k-thin90.a2m.gz # 1r0mA.t2k-thin90.a2m with 466 sequences, total weight= 466 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17318 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r0mA/info/1r0mA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r0mA/nostruct-align/1r0mA.t2k-thin90.a2m.gz, have 239114 columns in 989 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c4qA/nostruct-align/1c4qA.t2k-thin90.a2m.gz # 1c4qA.t2k-thin90.a2m with 6 sequences, total weight= 2.53165 avg weight= 0.421942 10 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c4qA/info/1c4qA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1c/1c4qA/nostruct-align/1c4qA.t2k-thin90.a2m.gz, have 239183 columns in 990 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sxrA/nostruct-align/1sxrA.t2k-thin90.a2m.gz # 1sxrA.t2k-thin90.a2m with 105 sequences, total weight= 38.7919 avg weight= 0.369447 41 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sxrA/info/1sxrA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sxrA/nostruct-align/1sxrA.t2k-thin90.a2m.gz, have 239356 columns in 991 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1utg/nostruct-align/1utg.t2k-thin90.a2m.gz # 1utg.t2k-thin90.a2m with 32 sequences, total weight= 11.2852 avg weight= 0.352662 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1utg/info/1utg.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1utg/nostruct-align/1utg.t2k-thin90.a2m.gz, have 239426 columns in 992 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1npk/nostruct-align/1npk.t2k-thin90.a2m.gz # 1npk.t2k-thin90.a2m with 223 sequences, total weight= 26.8092 avg weight= 0.12022 41 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1npk/info/1npk.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1npk/nostruct-align/1npk.t2k-thin90.a2m.gz, have 239576 columns in 993 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n62A/nostruct-align/1n62A.t2k-thin90.a2m.gz # 1n62A.t2k-thin90.a2m with 211 sequences, total weight= 19.2776 avg weight= 0.0913632 42 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n62A/info/1n62A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n62A/nostruct-align/1n62A.t2k-thin90.a2m.gz, have 239737 columns in 994 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mg4A/nostruct-align/1mg4A.t2k-thin90.a2m.gz # 1mg4A.t2k-thin90.a2m with 45 sequences, total weight= 37.4109 avg weight= 0.831353 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mg4A/info/1mg4A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mg4A/nostruct-align/1mg4A.t2k-thin90.a2m.gz, have 239838 columns in 995 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1llfA/nostruct-align/1llfA.t2k-thin90.a2m.gz # 1llfA.t2k-thin90.a2m with 412 sequences, total weight= 412 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14781 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1llfA/info/1llfA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1llfA/nostruct-align/1llfA.t2k-thin90.a2m.gz, have 240372 columns in 996 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t1vA/nostruct-align/1t1vA.t2k-thin90.a2m.gz # 1t1vA.t2k-thin90.a2m with 194 sequences, total weight= 60.8429 avg weight= 0.313623 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t1vA/info/1t1vA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t1vA/nostruct-align/1t1vA.t2k-thin90.a2m.gz, have 240465 columns in 997 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j0pA/nostruct-align/1j0pA.t2k-thin90.a2m.gz # 1j0pA.t2k-thin90.a2m with 54 sequences, total weight= 54 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11275 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j0pA/info/1j0pA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j0pA/nostruct-align/1j0pA.t2k-thin90.a2m.gz, have 240573 columns in 998 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1omrA/nostruct-align/1omrA.t2k-thin90.a2m.gz # 1omrA.t2k-thin90.a2m with 842 sequences, total weight= 842 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.082 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1omrA/info/1omrA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1omrA/nostruct-align/1omrA.t2k-thin90.a2m.gz, have 240774 columns in 999 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f60A/nostruct-align/1f60A.t2k-thin90.a2m.gz # 1f60A.t2k-thin90.a2m with 865 sequences, total weight= 485.886 avg weight= 0.561717 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30923 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f60A/info/1f60A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f60A/nostruct-align/1f60A.t2k-thin90.a2m.gz, have 241214 columns in 1000 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gvp/nostruct-align/1gvp.t2k-thin90.a2m.gz # 1gvp.t2k-thin90.a2m with 8 sequences, total weight= 4.61579 avg weight= 0.576974 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gvp/info/1gvp.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gvp/nostruct-align/1gvp.t2k-thin90.a2m.gz, have 241301 columns in 1001 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1knmA/nostruct-align/1knmA.t2k-thin90.a2m.gz # 1knmA.t2k-thin90.a2m with 175 sequences, total weight= 175 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07375 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1knmA/info/1knmA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1knmA/nostruct-align/1knmA.t2k-thin90.a2m.gz, have 241430 columns in 1002 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t2wA/nostruct-align/1t2wA.t2k-thin90.a2m.gz # 1t2wA.t2k-thin90.a2m with 93 sequences, total weight= 31.6839 avg weight= 0.340687 43 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t2wA/info/1t2wA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t2wA/nostruct-align/1t2wA.t2k-thin90.a2m.gz, have 241575 columns in 1003 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o9gA/nostruct-align/1o9gA.t2k-thin90.a2m.gz # 1o9gA.t2k-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.624727 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o9gA/info/1o9gA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o9gA/nostruct-align/1o9gA.t2k-thin90.a2m.gz, have 241824 columns in 1004 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fjjA/nostruct-align/1fjjA.t2k-thin90.a2m.gz # 1fjjA.t2k-thin90.a2m with 126 sequences, total weight= 91.0759 avg weight= 0.722825 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fjjA/info/1fjjA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fjjA/nostruct-align/1fjjA.t2k-thin90.a2m.gz, have 241983 columns in 1005 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1ccwB/nostruct-align/1ccwB.t2k-thin90.a2m.gz # 1ccwB.t2k-thin90.a2m with 7 sequences, total weight= 4.98297 avg weight= 0.711852 15 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1ccwB/info/1ccwB.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1c/1ccwB/nostruct-align/1ccwB.t2k-thin90.a2m.gz, have 242466 columns in 1006 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p5dX/nostruct-align/1p5dX.t2k-thin90.a2m.gz # 1p5dX.t2k-thin90.a2m with 445 sequences, total weight= 445 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25482 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p5dX/info/1p5dX.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p5dX/nostruct-align/1p5dX.t2k-thin90.a2m.gz, have 242921 columns in 1007 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1josA/nostruct-align/1josA.t2k-thin90.a2m.gz # 1josA.t2k-thin90.a2m with 109 sequences, total weight= 33.5382 avg weight= 0.30769 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1josA/info/1josA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1josA/nostruct-align/1josA.t2k-thin90.a2m.gz, have 243021 columns in 1008 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kpf/nostruct-align/1kpf.t2k-thin90.a2m.gz # 1kpf.t2k-thin90.a2m with 250 sequences, total weight= 84.9089 avg weight= 0.339636 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30083 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kpf/info/1kpf.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kpf/nostruct-align/1kpf.t2k-thin90.a2m.gz, have 243132 columns in 1009 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eg2A/nostruct-align/1eg2A.t2k-thin90.a2m.gz # 1eg2A.t2k-thin90.a2m with 213 sequences, total weight= 213 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21725 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eg2A/info/1eg2A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1eg2A/nostruct-align/1eg2A.t2k-thin90.a2m.gz, have 243402 columns in 1010 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ucsA/nostruct-align/1ucsA.t2k-thin90.a2m.gz # 1ucsA.t2k-thin90.a2m with 10 sequences, total weight= 5.03674 avg weight= 0.503674 15 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ucsA/info/1ucsA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ucsA/nostruct-align/1ucsA.t2k-thin90.a2m.gz, have 243466 columns in 1011 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sdiA/nostruct-align/1sdiA.t2k-thin90.a2m.gz # 1sdiA.t2k-thin90.a2m with 27 sequences, total weight= 9.13589 avg weight= 0.338366 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sdiA/info/1sdiA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sdiA/nostruct-align/1sdiA.t2k-thin90.a2m.gz, have 243679 columns in 1012 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1obdA/nostruct-align/1obdA.t2k-thin90.a2m.gz # 1obdA.t2k-thin90.a2m with 118 sequences, total weight= 38.0781 avg weight= 0.322696 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1obdA/info/1obdA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1obdA/nostruct-align/1obdA.t2k-thin90.a2m.gz, have 243977 columns in 1013 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rx0A/nostruct-align/1rx0A.t2k-thin90.a2m.gz # 1rx0A.t2k-thin90.a2m with 2601 sequences, total weight= 2601 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22367 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rx0A/info/1rx0A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rx0A/nostruct-align/1rx0A.t2k-thin90.a2m.gz, have 244361 columns in 1014 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p99A/nostruct-align/1p99A.t2k-thin90.a2m.gz # 1p99A.t2k-thin90.a2m with 142 sequences, total weight= 24.3631 avg weight= 0.171571 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p99A/info/1p99A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p99A/nostruct-align/1p99A.t2k-thin90.a2m.gz, have 244616 columns in 1015 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2l/2lisA/nostruct-align/2lisA.t2k-thin90.a2m.gz # 2lisA.t2k-thin90.a2m with 26 sequences, total weight= 8.54631 avg weight= 0.328704 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2l/2lisA/info/2lisA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/2l/2lisA/nostruct-align/2lisA.t2k-thin90.a2m.gz, have 244747 columns in 1016 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nvmA/nostruct-align/1nvmA.t2k-thin90.a2m.gz # 1nvmA.t2k-thin90.a2m with 354 sequences, total weight= 187.28 avg weight= 0.529038 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30264 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nvmA/info/1nvmA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nvmA/nostruct-align/1nvmA.t2k-thin90.a2m.gz, have 245087 columns in 1017 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1egwA/nostruct-align/1egwA.t2k-thin90.a2m.gz # 1egwA.t2k-thin90.a2m with 247 sequences, total weight= 14.2941 avg weight= 0.057871 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1egwA/info/1egwA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1egwA/nostruct-align/1egwA.t2k-thin90.a2m.gz, have 245158 columns in 1018 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jmkC/nostruct-align/1jmkC.t2k-thin90.a2m.gz # 1jmkC.t2k-thin90.a2m with 220 sequences, total weight= 220 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04524 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jmkC/info/1jmkC.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jmkC/nostruct-align/1jmkC.t2k-thin90.a2m.gz, have 245380 columns in 1019 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1duvG/nostruct-align/1duvG.t2k-thin90.a2m.gz # 1duvG.t2k-thin90.a2m with 174 sequences, total weight= 33.6078 avg weight= 0.193148 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1duvG/info/1duvG.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1duvG/nostruct-align/1duvG.t2k-thin90.a2m.gz, have 245713 columns in 1020 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rocA/nostruct-align/1rocA.t2k-thin90.a2m.gz # 1rocA.t2k-thin90.a2m with 18 sequences, total weight= 8.45724 avg weight= 0.469847 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rocA/info/1rocA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rocA/nostruct-align/1rocA.t2k-thin90.a2m.gz, have 245868 columns in 1021 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i71A/nostruct-align/1i71A.t2k-thin90.a2m.gz # 1i71A.t2k-thin90.a2m with 142 sequences, total weight= 17.9187 avg weight= 0.126188 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i71A/info/1i71A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i71A/nostruct-align/1i71A.t2k-thin90.a2m.gz, have 245951 columns in 1022 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1umgA/nostruct-align/1umgA.t2k-thin90.a2m.gz # 1umgA.t2k-thin90.a2m with 21 sequences, total weight= 3.74432 avg weight= 0.178301 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1umgA/info/1umgA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1umgA/nostruct-align/1umgA.t2k-thin90.a2m.gz, have 246310 columns in 1023 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h5uA/nostruct-align/1h5uA.t2k-thin90.a2m.gz # 1h5uA.t2k-thin90.a2m with 149 sequences, total weight= 27.1267 avg weight= 0.182058 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h5uA/info/1h5uA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h5uA/nostruct-align/1h5uA.t2k-thin90.a2m.gz, have 247121 columns in 1024 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gkpA/nostruct-align/1gkpA.t2k-thin90.a2m.gz # 1gkpA.t2k-thin90.a2m with 390 sequences, total weight= 390 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.959872 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gkpA/info/1gkpA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gkpA/nostruct-align/1gkpA.t2k-thin90.a2m.gz, have 247579 columns in 1025 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pa7A/nostruct-align/1pa7A.t2k-thin90.a2m.gz # 1pa7A.t2k-thin90.a2m with 33 sequences, total weight= 10.4566 avg weight= 0.316868 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pa7A/info/1pa7A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pa7A/nostruct-align/1pa7A.t2k-thin90.a2m.gz, have 247709 columns in 1026 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gnlA/nostruct-align/1gnlA.t2k-thin90.a2m.gz # 1gnlA.t2k-thin90.a2m with 52 sequences, total weight= 18.5719 avg weight= 0.357153 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gnlA/info/1gnlA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gnlA/nostruct-align/1gnlA.t2k-thin90.a2m.gz, have 248252 columns in 1027 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bteA/nostruct-align/1bteA.t2k-thin90.a2m.gz # 1bteA.t2k-thin90.a2m with 16 sequences, total weight= 8.63899 avg weight= 0.539937 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bteA/info/1bteA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bteA/nostruct-align/1bteA.t2k-thin90.a2m.gz, have 248344 columns in 1028 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gu2A/nostruct-align/1gu2A.t2k-thin90.a2m.gz # 1gu2A.t2k-thin90.a2m with 6 sequences, total weight= 5.40735 avg weight= 0.901225 13 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gu2A/info/1gu2A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gu2A/nostruct-align/1gu2A.t2k-thin90.a2m.gz, have 248468 columns in 1029 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l1lA/nostruct-align/1l1lA.t2k-thin90.a2m.gz # 1l1lA.t2k-thin90.a2m with 51 sequences, total weight= 40.3366 avg weight= 0.790915 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l1lA/info/1l1lA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1l1lA/nostruct-align/1l1lA.t2k-thin90.a2m.gz, have 249185 columns in 1030 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e2wA/nostruct-align/1e2wA.t2k-thin90.a2m.gz # 1e2wA.t2k-thin90.a2m with 32 sequences, total weight= 3.43532 avg weight= 0.107354 19 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e2wA/info/1e2wA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e2wA/nostruct-align/1e2wA.t2k-thin90.a2m.gz, have 249436 columns in 1031 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kt6A/nostruct-align/1kt6A.t2k-thin90.a2m.gz # 1kt6A.t2k-thin90.a2m with 94 sequences, total weight= 94 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0781 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kt6A/info/1kt6A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kt6A/nostruct-align/1kt6A.t2k-thin90.a2m.gz, have 249611 columns in 1032 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2m/2mhr/nostruct-align/2mhr.t2k-thin90.a2m.gz # 2mhr.t2k-thin90.a2m with 89 sequences, total weight= 68.1084 avg weight= 0.765262 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2m/2mhr/info/2mhr.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/2m/2mhr/nostruct-align/2mhr.t2k-thin90.a2m.gz, have 249729 columns in 1033 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vjoA/nostruct-align/1vjoA.t2k-thin90.a2m.gz # 1vjoA.t2k-thin90.a2m with 1224 sequences, total weight= 1224 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.968046 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vjoA/info/1vjoA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vjoA/nostruct-align/1vjoA.t2k-thin90.a2m.gz, have 250106 columns in 1034 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mqvA/nostruct-align/1mqvA.t2k-thin90.a2m.gz # 1mqvA.t2k-thin90.a2m with 36 sequences, total weight= 26.3079 avg weight= 0.730776 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mqvA/info/1mqvA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mqvA/nostruct-align/1mqvA.t2k-thin90.a2m.gz, have 250229 columns in 1035 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1io0A/nostruct-align/1io0A.t2k-thin90.a2m.gz # 1io0A.t2k-thin90.a2m with 212 sequences, total weight= 212 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13336 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1io0A/info/1io0A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1io0A/nostruct-align/1io0A.t2k-thin90.a2m.gz, have 250395 columns in 1036 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i40A/nostruct-align/1i40A.t2k-thin90.a2m.gz # 1i40A.t2k-thin90.a2m with 139 sequences, total weight= 24.3314 avg weight= 0.175046 41 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i40A/info/1i40A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i40A/nostruct-align/1i40A.t2k-thin90.a2m.gz, have 250570 columns in 1037 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t0bA/nostruct-align/1t0bA.t2k-thin90.a2m.gz # 1t0bA.t2k-thin90.a2m with 13 sequences, total weight= 3.16533 avg weight= 0.243487 15 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t0bA/info/1t0bA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t0bA/nostruct-align/1t0bA.t2k-thin90.a2m.gz, have 250810 columns in 1038 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uxaA/nostruct-align/1uxaA.t2k-thin90.a2m.gz # 1uxaA.t2k-thin90.a2m with 33 sequences, total weight= 14.7892 avg weight= 0.448156 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uxaA/info/1uxaA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uxaA/nostruct-align/1uxaA.t2k-thin90.a2m.gz, have 250995 columns in 1039 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cjwA/nostruct-align/1cjwA.t2k-thin90.a2m.gz # 1cjwA.t2k-thin90.a2m with 195 sequences, total weight= 195 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.940738 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cjwA/info/1cjwA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cjwA/nostruct-align/1cjwA.t2k-thin90.a2m.gz, have 251161 columns in 1040 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/8a/8abp/nostruct-align/8abp.t2k-thin90.a2m.gz # 8abp.t2k-thin90.a2m with 215 sequences, total weight= 215 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16704 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/8a/8abp/info/8abp.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/8a/8abp/nostruct-align/8abp.t2k-thin90.a2m.gz, have 251466 columns in 1041 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bopA/nostruct-align/2bopA.t2k-thin90.a2m.gz # 2bopA.t2k-thin90.a2m with 101 sequences, total weight= 14.2015 avg weight= 0.140609 37 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bopA/info/2bopA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/2b/2bopA/nostruct-align/2bopA.t2k-thin90.a2m.gz, have 251551 columns in 1042 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qmgA/nostruct-align/1qmgA.t2k-thin90.a2m.gz # 1qmgA.t2k-thin90.a2m with 107 sequences, total weight= 13.8665 avg weight= 0.129593 26 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qmgA/info/1qmgA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qmgA/nostruct-align/1qmgA.t2k-thin90.a2m.gz, have 252065 columns in 1043 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jovA/nostruct-align/1jovA.t2k-thin90.a2m.gz # 1jovA.t2k-thin90.a2m with 52 sequences, total weight= 41.8933 avg weight= 0.805641 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jovA/info/1jovA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jovA/nostruct-align/1jovA.t2k-thin90.a2m.gz, have 252334 columns in 1044 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e85A/nostruct-align/1e85A.t2k-thin90.a2m.gz # 1e85A.t2k-thin90.a2m with 36 sequences, total weight= 31.6579 avg weight= 0.879386 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e85A/info/1e85A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e85A/nostruct-align/1e85A.t2k-thin90.a2m.gz, have 252459 columns in 1045 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hqkA/nostruct-align/1hqkA.t2k-thin90.a2m.gz # 1hqkA.t2k-thin90.a2m with 135 sequences, total weight= 21.4408 avg weight= 0.158821 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hqkA/info/1hqkA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hqkA/nostruct-align/1hqkA.t2k-thin90.a2m.gz, have 252613 columns in 1046 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c75A/nostruct-align/1c75A.t2k-thin90.a2m.gz # 1c75A.t2k-thin90.a2m with 237 sequences, total weight= 120.119 avg weight= 0.506833 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30147 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c75A/info/1c75A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1c/1c75A/nostruct-align/1c75A.t2k-thin90.a2m.gz, have 252684 columns in 1047 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dg6A/nostruct-align/1dg6A.t2k-thin90.a2m.gz # 1dg6A.t2k-thin90.a2m with 74 sequences, total weight= 42.307 avg weight= 0.571716 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dg6A/info/1dg6A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dg6A/nostruct-align/1dg6A.t2k-thin90.a2m.gz, have 252833 columns in 1048 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1syyA/nostruct-align/1syyA.t2k-thin90.a2m.gz # 1syyA.t2k-thin90.a2m with 231 sequences, total weight= 143.607 avg weight= 0.621674 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30113 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1syyA/info/1syyA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1syyA/nostruct-align/1syyA.t2k-thin90.a2m.gz, have 253150 columns in 1049 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vknA/nostruct-align/1vknA.t2k-thin90.a2m.gz # 1vknA.t2k-thin90.a2m with 300 sequences, total weight= 52.4451 avg weight= 0.174817 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3005 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vknA/info/1vknA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vknA/nostruct-align/1vknA.t2k-thin90.a2m.gz, have 253490 columns in 1050 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a62/nostruct-align/1a62.t2k-thin90.a2m.gz # 1a62.t2k-thin90.a2m with 74 sequences, total weight= 12.3024 avg weight= 0.166248 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a62/info/1a62.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1a/1a62/nostruct-align/1a62.t2k-thin90.a2m.gz, have 253615 columns in 1051 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e6bA/nostruct-align/1e6bA.t2k-thin90.a2m.gz # 1e6bA.t2k-thin90.a2m with 599 sequences, total weight= 599 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.171 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e6bA/info/1e6bA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e6bA/nostruct-align/1e6bA.t2k-thin90.a2m.gz, have 253809 columns in 1052 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-thin90.a2m.gz # 1nzyA.t2k-thin90.a2m with 361 sequences, total weight= 361 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24866 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-thin90.a2m.gz, have 254078 columns in 1053 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r7jA/nostruct-align/1r7jA.t2k-thin90.a2m.gz # 1r7jA.t2k-thin90.a2m with 34 sequences, total weight= 28.995 avg weight= 0.852793 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r7jA/info/1r7jA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r7jA/nostruct-align/1r7jA.t2k-thin90.a2m.gz, have 254168 columns in 1054 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bgc/nostruct-align/1bgc.t2k-thin90.a2m.gz # 1bgc.t2k-thin90.a2m with 24 sequences, total weight= 10.4482 avg weight= 0.43534 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bgc/info/1bgc.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bgc/nostruct-align/1bgc.t2k-thin90.a2m.gz, have 254326 columns in 1055 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j1yA/nostruct-align/1j1yA.t2k-thin90.a2m.gz # 1j1yA.t2k-thin90.a2m with 266 sequences, total weight= 266 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23366 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j1yA/info/1j1yA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j1yA/nostruct-align/1j1yA.t2k-thin90.a2m.gz, have 254442 columns in 1056 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qxyA/nostruct-align/1qxyA.t2k-thin90.a2m.gz # 1qxyA.t2k-thin90.a2m with 1254 sequences, total weight= 1254 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2532 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qxyA/info/1qxyA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qxyA/nostruct-align/1qxyA.t2k-thin90.a2m.gz, have 254691 columns in 1057 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oz2A/nostruct-align/1oz2A.t2k-thin90.a2m.gz # 1oz2A.t2k-thin90.a2m with 30 sequences, total weight= 13.684 avg weight= 0.456134 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oz2A/info/1oz2A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oz2A/nostruct-align/1oz2A.t2k-thin90.a2m.gz, have 255015 columns in 1058 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1shuX/nostruct-align/1shuX.t2k-thin90.a2m.gz # 1shuX.t2k-thin90.a2m with 433 sequences, total weight= 433 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.10198 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1shuX/info/1shuX.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1shuX/nostruct-align/1shuX.t2k-thin90.a2m.gz, have 255196 columns in 1059 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h8uA/nostruct-align/1h8uA.t2k-thin90.a2m.gz # 1h8uA.t2k-thin90.a2m with 334 sequences, total weight= 334 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19022 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h8uA/info/1h8uA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h8uA/nostruct-align/1h8uA.t2k-thin90.a2m.gz, have 255311 columns in 1060 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oc7A/nostruct-align/1oc7A.t2k-thin90.a2m.gz # 1oc7A.t2k-thin90.a2m with 60 sequences, total weight= 18.7363 avg weight= 0.312272 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oc7A/info/1oc7A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oc7A/nostruct-align/1oc7A.t2k-thin90.a2m.gz, have 255675 columns in 1061 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ufoA/nostruct-align/1ufoA.t2k-thin90.a2m.gz # 1ufoA.t2k-thin90.a2m with 376 sequences, total weight= 376 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.873807 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ufoA/info/1ufoA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ufoA/nostruct-align/1ufoA.t2k-thin90.a2m.gz, have 255913 columns in 1062 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1ji7A/nostruct-align/1ji7A.t2k-thin90.a2m.gz # 1ji7A.t2k-thin90.a2m with 36 sequences, total weight= 20.0438 avg weight= 0.556772 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1ji7A/info/1ji7A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1ji7A/nostruct-align/1ji7A.t2k-thin90.a2m.gz, have 255990 columns in 1063 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wkrA/nostruct-align/1wkrA.t2k-thin90.a2m.gz # 1wkrA.t2k-thin90.a2m with 651 sequences, total weight= 651 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27813 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wkrA/info/1wkrA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wkrA/nostruct-align/1wkrA.t2k-thin90.a2m.gz, have 256330 columns in 1064 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nszA/nostruct-align/1nszA.t2k-thin90.a2m.gz # 1nszA.t2k-thin90.a2m with 97 sequences, total weight= 79.9224 avg weight= 0.823942 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nszA/info/1nszA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nszA/nostruct-align/1nszA.t2k-thin90.a2m.gz, have 256670 columns in 1065 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q74A/nostruct-align/1q74A.t2k-thin90.a2m.gz # 1q74A.t2k-thin90.a2m with 122 sequences, total weight= 122 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.06914 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q74A/info/1q74A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q74A/nostruct-align/1q74A.t2k-thin90.a2m.gz, have 256957 columns in 1066 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dd9A/nostruct-align/1dd9A.t2k-thin90.a2m.gz # 1dd9A.t2k-thin90.a2m with 160 sequences, total weight= 123.828 avg weight= 0.773922 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30047 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dd9A/info/1dd9A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dd9A/nostruct-align/1dd9A.t2k-thin90.a2m.gz, have 257267 columns in 1067 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mml/nostruct-align/1mml.t2k-thin90.a2m.gz # 1mml.t2k-thin90.a2m with 509 sequences, total weight= 64.5292 avg weight= 0.126777 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3004 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mml/info/1mml.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mml/nostruct-align/1mml.t2k-thin90.a2m.gz, have 257518 columns in 1068 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1aquA/nostruct-align/1aquA.t2k-thin90.a2m.gz # 1aquA.t2k-thin90.a2m with 148 sequences, total weight= 99.5748 avg weight= 0.672803 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30038 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1aquA/info/1aquA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1a/1aquA/nostruct-align/1aquA.t2k-thin90.a2m.gz, have 257799 columns in 1069 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i2kA/nostruct-align/1i2kA.t2k-thin90.a2m.gz # 1i2kA.t2k-thin90.a2m with 218 sequences, total weight= 218 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29736 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i2kA/info/1i2kA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i2kA/nostruct-align/1i2kA.t2k-thin90.a2m.gz, have 258068 columns in 1070 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sc3A/nostruct-align/1sc3A.t2k-thin90.a2m.gz # 1sc3A.t2k-thin90.a2m with 154 sequences, total weight= 90.3442 avg weight= 0.586651 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sc3A/info/1sc3A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sc3A/nostruct-align/1sc3A.t2k-thin90.a2m.gz, have 258241 columns in 1071 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m9zA/nostruct-align/1m9zA.t2k-thin90.a2m.gz # 1m9zA.t2k-thin90.a2m with 8 sequences, total weight= 3.24478 avg weight= 0.405598 14 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m9zA/info/1m9zA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m9zA/nostruct-align/1m9zA.t2k-thin90.a2m.gz, have 258346 columns in 1072 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c1dA/nostruct-align/1c1dA.t2k-thin90.a2m.gz # 1c1dA.t2k-thin90.a2m with 247 sequences, total weight= 42.434 avg weight= 0.171797 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c1dA/info/1c1dA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1c/1c1dA/nostruct-align/1c1dA.t2k-thin90.a2m.gz, have 258695 columns in 1073 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vk5A/nostruct-align/1vk5A.t2k-thin90.a2m.gz # 1vk5A.t2k-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.58791 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vk5A/info/1vk5A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vk5A/nostruct-align/1vk5A.t2k-thin90.a2m.gz, have 258816 columns in 1074 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ie9A/nostruct-align/1ie9A.t2k-thin90.a2m.gz # 1ie9A.t2k-thin90.a2m with 250 sequences, total weight= 250 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03377 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ie9A/info/1ie9A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ie9A/nostruct-align/1ie9A.t2k-thin90.a2m.gz, have 259071 columns in 1075 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54A/nostruct-align/1v54A.t2k-thin90.a2m.gz # 1v54A.t2k-thin90.a2m with 1988 sequences, total weight= 62.2894 avg weight= 0.0313327 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54A/info/1v54A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v54A/nostruct-align/1v54A.t2k-thin90.a2m.gz, have 259585 columns in 1076 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nogA/nostruct-align/1nogA.t2k-thin90.a2m.gz # 1nogA.t2k-thin90.a2m with 68 sequences, total weight= 14.9283 avg weight= 0.219534 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nogA/info/1nogA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nogA/nostruct-align/1nogA.t2k-thin90.a2m.gz, have 259734 columns in 1077 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1ay7B/nostruct-align/1ay7B.t2k-thin90.a2m.gz # 1ay7B.t2k-thin90.a2m with 22 sequences, total weight= 22 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29556 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1ay7B/info/1ay7B.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1a/1ay7B/nostruct-align/1ay7B.t2k-thin90.a2m.gz, have 259823 columns in 1078 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cruA/nostruct-align/1cruA.t2k-thin90.a2m.gz # 1cruA.t2k-thin90.a2m with 99 sequences, total weight= 99 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21869 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cruA/info/1cruA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cruA/nostruct-align/1cruA.t2k-thin90.a2m.gz, have 260271 columns in 1079 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dc1A/nostruct-align/1dc1A.t2k-thin90.a2m.gz # 1dc1A.t2k-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14377 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dc1A/info/1dc1A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dc1A/nostruct-align/1dc1A.t2k-thin90.a2m.gz, have 260581 columns in 1080 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kid/nostruct-align/1kid.t2k-thin90.a2m.gz # 1kid.t2k-thin90.a2m with 197 sequences, total weight= 12.1824 avg weight= 0.0618397 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kid/info/1kid.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kid/nostruct-align/1kid.t2k-thin90.a2m.gz, have 260774 columns in 1081 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rliA/nostruct-align/1rliA.t2k-thin90.a2m.gz # 1rliA.t2k-thin90.a2m with 251 sequences, total weight= 251 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08779 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rliA/info/1rliA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rliA/nostruct-align/1rliA.t2k-thin90.a2m.gz, have 260930 columns in 1082 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1moq/nostruct-align/1moq.t2k-thin90.a2m.gz # 1moq.t2k-thin90.a2m with 355 sequences, total weight= 257.859 avg weight= 0.726365 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30236 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1moq/info/1moq.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1moq/nostruct-align/1moq.t2k-thin90.a2m.gz, have 261296 columns in 1083 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ryqA/nostruct-align/1ryqA.t2k-thin90.a2m.gz # 1ryqA.t2k-thin90.a2m with 19 sequences, total weight= 6.55252 avg weight= 0.34487 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ryqA/info/1ryqA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1ryqA/nostruct-align/1ryqA.t2k-thin90.a2m.gz, have 261360 columns in 1084 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fm0E/nostruct-align/1fm0E.t2k-thin90.a2m.gz # 1fm0E.t2k-thin90.a2m with 104 sequences, total weight= 26.5633 avg weight= 0.255416 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fm0E/info/1fm0E.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fm0E/nostruct-align/1fm0E.t2k-thin90.a2m.gz, have 261502 columns in 1085 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e7lA/nostruct-align/1e7lA.t2k-thin90.a2m.gz # 1e7lA.t2k-thin90.a2m with 25 sequences, total weight= 18.6075 avg weight= 0.7443 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e7lA/info/1e7lA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e7lA/nostruct-align/1e7lA.t2k-thin90.a2m.gz, have 261659 columns in 1086 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q92A/nostruct-align/1q92A.t2k-thin90.a2m.gz # 1q92A.t2k-thin90.a2m with 39 sequences, total weight= 39 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2973 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q92A/info/1q92A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q92A/nostruct-align/1q92A.t2k-thin90.a2m.gz, have 261854 columns in 1087 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jyeA/nostruct-align/1jyeA.t2k-thin90.a2m.gz # 1jyeA.t2k-thin90.a2m with 420 sequences, total weight= 420 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08647 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jyeA/info/1jyeA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jyeA/nostruct-align/1jyeA.t2k-thin90.a2m.gz, have 262125 columns in 1088 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lst/nostruct-align/1lst.t2k-thin90.a2m.gz # 1lst.t2k-thin90.a2m with 259 sequences, total weight= 259 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19975 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lst/info/1lst.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lst/nostruct-align/1lst.t2k-thin90.a2m.gz, have 262363 columns in 1089 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qwoA/nostruct-align/1qwoA.t2k-thin90.a2m.gz # 1qwoA.t2k-thin90.a2m with 71 sequences, total weight= 71 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25265 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qwoA/info/1qwoA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qwoA/nostruct-align/1qwoA.t2k-thin90.a2m.gz, have 262798 columns in 1090 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k1eA/nostruct-align/1k1eA.t2k-thin90.a2m.gz # 1k1eA.t2k-thin90.a2m with 292 sequences, total weight= 151.212 avg weight= 0.51785 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30091 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k1eA/info/1k1eA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k1eA/nostruct-align/1k1eA.t2k-thin90.a2m.gz, have 262975 columns in 1091 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2h/2hft/nostruct-align/2hft.t2k-thin90.a2m.gz # 2hft.t2k-thin90.a2m with 49 sequences, total weight= 49 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1794 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2h/2hft/info/2hft.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/2h/2hft/nostruct-align/2hft.t2k-thin90.a2m.gz, have 263180 columns in 1092 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/19/19hcA/nostruct-align/19hcA.t2k-thin90.a2m.gz # 19hcA.t2k-thin90.a2m with 146 sequences, total weight= 146 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.813899 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/19/19hcA/info/19hcA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/19/19hcA/nostruct-align/19hcA.t2k-thin90.a2m.gz, have 263472 columns in 1093 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g66A/nostruct-align/1g66A.t2k-thin90.a2m.gz # 1g66A.t2k-thin90.a2m with 35 sequences, total weight= 27.2235 avg weight= 0.777813 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g66A/info/1g66A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g66A/nostruct-align/1g66A.t2k-thin90.a2m.gz, have 263679 columns in 1094 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wmzA/nostruct-align/1wmzA.t2k-thin90.a2m.gz # 1wmzA.t2k-thin90.a2m with 1016 sequences, total weight= 1016 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08287 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wmzA/info/1wmzA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wmzA/nostruct-align/1wmzA.t2k-thin90.a2m.gz, have 263819 columns in 1095 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ew6A/nostruct-align/1ew6A.t2k-thin90.a2m.gz # 1ew6A.t2k-thin90.a2m with 123 sequences, total weight= 91.7864 avg weight= 0.746231 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30041 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ew6A/info/1ew6A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ew6A/nostruct-align/1ew6A.t2k-thin90.a2m.gz, have 263956 columns in 1096 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h97A/nostruct-align/1h97A.t2k-thin90.a2m.gz # 1h97A.t2k-thin90.a2m with 164 sequences, total weight= 164 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.2825 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h97A/info/1h97A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h97A/nostruct-align/1h97A.t2k-thin90.a2m.gz, have 264103 columns in 1097 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2n/2nacA/nostruct-align/2nacA.t2k-thin90.a2m.gz # 2nacA.t2k-thin90.a2m with 269 sequences, total weight= 155.477 avg weight= 0.577982 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30059 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2n/2nacA/info/2nacA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/2n/2nacA/nostruct-align/2nacA.t2k-thin90.a2m.gz, have 264477 columns in 1098 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i0rA/nostruct-align/1i0rA.t2k-thin90.a2m.gz # 1i0rA.t2k-thin90.a2m with 186 sequences, total weight= 87.39 avg weight= 0.469839 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30033 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i0rA/info/1i0rA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i0rA/nostruct-align/1i0rA.t2k-thin90.a2m.gz, have 264638 columns in 1099 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nbuA/nostruct-align/1nbuA.t2k-thin90.a2m.gz # 1nbuA.t2k-thin90.a2m with 108 sequences, total weight= 28.2446 avg weight= 0.261524 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nbuA/info/1nbuA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nbuA/nostruct-align/1nbuA.t2k-thin90.a2m.gz, have 264756 columns in 1100 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sj1A/nostruct-align/1sj1A.t2k-thin90.a2m.gz # 1sj1A.t2k-thin90.a2m with 669 sequences, total weight= 272.97 avg weight= 0.408026 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30899 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sj1A/info/1sj1A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sj1A/nostruct-align/1sj1A.t2k-thin90.a2m.gz, have 264822 columns in 1101 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gtvA/nostruct-align/1gtvA.t2k-thin90.a2m.gz # 1gtvA.t2k-thin90.a2m with 173 sequences, total weight= 173 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24903 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gtvA/info/1gtvA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gtvA/nostruct-align/1gtvA.t2k-thin90.a2m.gz, have 265030 columns in 1102 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nwzA/nostruct-align/1nwzA.t2k-thin90.a2m.gz # 1nwzA.t2k-thin90.a2m with 6 sequences, total weight= 3.38215 avg weight= 0.563692 14 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nwzA/info/1nwzA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nwzA/nostruct-align/1nwzA.t2k-thin90.a2m.gz, have 265155 columns in 1103 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bqcA/nostruct-align/1bqcA.t2k-thin90.a2m.gz # 1bqcA.t2k-thin90.a2m with 130 sequences, total weight= 130 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21436 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bqcA/info/1bqcA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bqcA/nostruct-align/1bqcA.t2k-thin90.a2m.gz, have 265457 columns in 1104 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vl1A/nostruct-align/1vl1A.t2k-thin90.a2m.gz # 1vl1A.t2k-thin90.a2m with 274 sequences, total weight= 88.8054 avg weight= 0.324107 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30244 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vl1A/info/1vl1A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vl1A/nostruct-align/1vl1A.t2k-thin90.a2m.gz, have 265675 columns in 1105 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cqmA/nostruct-align/1cqmA.t2k-thin90.a2m.gz # 1cqmA.t2k-thin90.a2m with 109 sequences, total weight= 37.0637 avg weight= 0.340034 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cqmA/info/1cqmA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cqmA/nostruct-align/1cqmA.t2k-thin90.a2m.gz, have 265773 columns in 1106 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iktA/nostruct-align/1iktA.t2k-thin90.a2m.gz # 1iktA.t2k-thin90.a2m with 72 sequences, total weight= 72 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25826 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iktA/info/1iktA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iktA/nostruct-align/1iktA.t2k-thin90.a2m.gz, have 265888 columns in 1107 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rhs/nostruct-align/1rhs.t2k-thin90.a2m.gz # 1rhs.t2k-thin90.a2m with 173 sequences, total weight= 173 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25426 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rhs/info/1rhs.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rhs/nostruct-align/1rhs.t2k-thin90.a2m.gz, have 266181 columns in 1108 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j8rA/nostruct-align/1j8rA.t2k-thin90.a2m.gz # 1j8rA.t2k-thin90.a2m with 5 sequences, total weight= 3.45363 avg weight= 0.690725 12 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j8rA/info/1j8rA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j8rA/nostruct-align/1j8rA.t2k-thin90.a2m.gz, have 266377 columns in 1109 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k3xA/nostruct-align/1k3xA.t2k-thin90.a2m.gz # 1k3xA.t2k-thin90.a2m with 137 sequences, total weight= 54.5522 avg weight= 0.398192 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k3xA/info/1k3xA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k3xA/nostruct-align/1k3xA.t2k-thin90.a2m.gz, have 266630 columns in 1110 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iooA/nostruct-align/1iooA.t2k-thin90.a2m.gz # 1iooA.t2k-thin90.a2m with 226 sequences, total weight= 60.2779 avg weight= 0.266717 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30044 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iooA/info/1iooA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iooA/nostruct-align/1iooA.t2k-thin90.a2m.gz, have 266826 columns in 1111 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gweA/nostruct-align/1gweA.t2k-thin90.a2m.gz # 1gweA.t2k-thin90.a2m with 153 sequences, total weight= 21.221 avg weight= 0.138699 37 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gweA/info/1gweA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gweA/nostruct-align/1gweA.t2k-thin90.a2m.gz, have 267324 columns in 1112 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oqvA/nostruct-align/1oqvA.t2k-thin90.a2m.gz # 1oqvA.t2k-thin90.a2m with 13 sequences, total weight= 3.82273 avg weight= 0.294056 15 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oqvA/info/1oqvA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oqvA/nostruct-align/1oqvA.t2k-thin90.a2m.gz, have 267495 columns in 1113 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jlvA/nostruct-align/1jlvA.t2k-thin90.a2m.gz # 1jlvA.t2k-thin90.a2m with 723 sequences, total weight= 723 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1188 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jlvA/info/1jlvA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jlvA/nostruct-align/1jlvA.t2k-thin90.a2m.gz, have 267702 columns in 1114 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nrvA/nostruct-align/1nrvA.t2k-thin90.a2m.gz # 1nrvA.t2k-thin90.a2m with 272 sequences, total weight= 136.604 avg weight= 0.502219 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30243 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nrvA/info/1nrvA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nrvA/nostruct-align/1nrvA.t2k-thin90.a2m.gz, have 267802 columns in 1115 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kcqA/nostruct-align/1kcqA.t2k-thin90.a2m.gz # 1kcqA.t2k-thin90.a2m with 170 sequences, total weight= 170 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17954 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kcqA/info/1kcqA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kcqA/nostruct-align/1kcqA.t2k-thin90.a2m.gz, have 267905 columns in 1116 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w53A/nostruct-align/1w53A.t2k-thin90.a2m.gz # 1w53A.t2k-thin90.a2m with 8 sequences, total weight= 5.78613 avg weight= 0.723266 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w53A/info/1w53A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w53A/nostruct-align/1w53A.t2k-thin90.a2m.gz, have 267989 columns in 1117 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bdmA/nostruct-align/1bdmA.t2k-thin90.a2m.gz # 1bdmA.t2k-thin90.a2m with 196 sequences, total weight= 38.9941 avg weight= 0.198949 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bdmA/info/1bdmA.stride-mixed.CB-burial-14-7 WARNING: skipping b, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1b/1bdmA/nostruct-align/1bdmA.t2k-thin90.a2m.gz, have 268306 columns in 1118 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2i/2ilk/nostruct-align/2ilk.t2k-thin90.a2m.gz # 2ilk.t2k-thin90.a2m with 41 sequences, total weight= 20.2112 avg weight= 0.492957 31 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2i/2ilk/info/2ilk.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/2i/2ilk/nostruct-align/2ilk.t2k-thin90.a2m.gz, have 268461 columns in 1119 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h2eA/nostruct-align/1h2eA.t2k-thin90.a2m.gz # 1h2eA.t2k-thin90.a2m with 283 sequences, total weight= 283 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12799 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h2eA/info/1h2eA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h2eA/nostruct-align/1h2eA.t2k-thin90.a2m.gz, have 268668 columns in 1120 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uzbA/nostruct-align/1uzbA.t2k-thin90.a2m.gz # 1uzbA.t2k-thin90.a2m with 3087 sequences, total weight= 746.337 avg weight= 0.241768 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32387 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uzbA/info/1uzbA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uzbA/nostruct-align/1uzbA.t2k-thin90.a2m.gz, have 269184 columns in 1121 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w2fA/nostruct-align/1w2fA.t2k-thin90.a2m.gz # 1w2fA.t2k-thin90.a2m with 84 sequences, total weight= 25.8289 avg weight= 0.307486 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w2fA/info/1w2fA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w2fA/nostruct-align/1w2fA.t2k-thin90.a2m.gz, have 269460 columns in 1122 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1isuA/nostruct-align/1isuA.t2k-thin90.a2m.gz # 1isuA.t2k-thin90.a2m with 21 sequences, total weight= 10.7372 avg weight= 0.511297 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1isuA/info/1isuA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1isuA/nostruct-align/1isuA.t2k-thin90.a2m.gz, have 269522 columns in 1123 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iab/nostruct-align/1iab.t2k-thin90.a2m.gz # 1iab.t2k-thin90.a2m with 119 sequences, total weight= 47.7869 avg weight= 0.401571 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iab/info/1iab.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iab/nostruct-align/1iab.t2k-thin90.a2m.gz, have 269722 columns in 1124 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qusA/nostruct-align/1qusA.t2k-thin90.a2m.gz # 1qusA.t2k-thin90.a2m with 91 sequences, total weight= 34.885 avg weight= 0.383352 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qusA/info/1qusA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qusA/nostruct-align/1qusA.t2k-thin90.a2m.gz, have 270034 columns in 1125 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mc2A/nostruct-align/1mc2A.t2k-thin90.a2m.gz # 1mc2A.t2k-thin90.a2m with 185 sequences, total weight= 16.6386 avg weight= 0.0899382 42 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mc2A/info/1mc2A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mc2A/nostruct-align/1mc2A.t2k-thin90.a2m.gz, have 270156 columns in 1126 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qtwA/nostruct-align/1qtwA.t2k-thin90.a2m.gz # 1qtwA.t2k-thin90.a2m with 89 sequences, total weight= 63.2785 avg weight= 0.710994 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qtwA/info/1qtwA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qtwA/nostruct-align/1qtwA.t2k-thin90.a2m.gz, have 270441 columns in 1127 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vsrA/nostruct-align/1vsrA.t2k-thin90.a2m.gz # 1vsrA.t2k-thin90.a2m with 15 sequences, total weight= 7.71965 avg weight= 0.514643 20 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vsrA/info/1vsrA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vsrA/nostruct-align/1vsrA.t2k-thin90.a2m.gz, have 270575 columns in 1128 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1na3A/nostruct-align/1na3A.t2k-thin90.a2m.gz # 1na3A.t2k-thin90.a2m with 2404 sequences, total weight= 2404 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02581 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1na3A/info/1na3A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1na3A/nostruct-align/1na3A.t2k-thin90.a2m.gz, have 270661 columns in 1129 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lo7A/nostruct-align/1lo7A.t2k-thin90.a2m.gz # 1lo7A.t2k-thin90.a2m with 121 sequences, total weight= 121 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25115 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lo7A/info/1lo7A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lo7A/nostruct-align/1lo7A.t2k-thin90.a2m.gz, have 270801 columns in 1130 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1flmA/nostruct-align/1flmA.t2k-thin90.a2m.gz # 1flmA.t2k-thin90.a2m with 8 sequences, total weight= 4.47678 avg weight= 0.559598 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1flmA/info/1flmA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1flmA/nostruct-align/1flmA.t2k-thin90.a2m.gz, have 270923 columns in 1131 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lb6A/nostruct-align/1lb6A.t2k-thin90.a2m.gz # 1lb6A.t2k-thin90.a2m with 45 sequences, total weight= 30.2175 avg weight= 0.671501 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lb6A/info/1lb6A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lb6A/nostruct-align/1lb6A.t2k-thin90.a2m.gz, have 271078 columns in 1132 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gci/nostruct-align/1gci.t2k-thin90.a2m.gz # 1gci.t2k-thin90.a2m with 386 sequences, total weight= 211.591 avg weight= 0.548163 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30533 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gci/info/1gci.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gci/nostruct-align/1gci.t2k-thin90.a2m.gz, have 271347 columns in 1133 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1juvA/nostruct-align/1juvA.t2k-thin90.a2m.gz # 1juvA.t2k-thin90.a2m with 169 sequences, total weight= 83.9709 avg weight= 0.496869 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1juvA/info/1juvA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1juvA/nostruct-align/1juvA.t2k-thin90.a2m.gz, have 271540 columns in 1134 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d1qA/nostruct-align/1d1qA.t2k-thin90.a2m.gz # 1d1qA.t2k-thin90.a2m with 170 sequences, total weight= 65.9094 avg weight= 0.387702 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30036 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d1qA/info/1d1qA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d1qA/nostruct-align/1d1qA.t2k-thin90.a2m.gz, have 271699 columns in 1135 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1unqA/nostruct-align/1unqA.t2k-thin90.a2m.gz # 1unqA.t2k-thin90.a2m with 320 sequences, total weight= 320 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13889 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1unqA/info/1unqA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1unqA/nostruct-align/1unqA.t2k-thin90.a2m.gz, have 271816 columns in 1136 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g4yB/nostruct-align/1g4yB.t2k-thin90.a2m.gz # 1g4yB.t2k-thin90.a2m with 12 sequences, total weight= 5.43649 avg weight= 0.453041 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g4yB/info/1g4yB.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g4yB/nostruct-align/1g4yB.t2k-thin90.a2m.gz, have 271897 columns in 1137 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m1nA/nostruct-align/1m1nA.t2k-thin90.a2m.gz # 1m1nA.t2k-thin90.a2m with 227 sequences, total weight= 227 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28964 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m1nA/info/1m1nA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m1nA/nostruct-align/1m1nA.t2k-thin90.a2m.gz, have 272374 columns in 1138 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tzpA/nostruct-align/1tzpA.t2k-thin90.a2m.gz # 1tzpA.t2k-thin90.a2m with 24 sequences, total weight= 6.22104 avg weight= 0.25921 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tzpA/info/1tzpA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tzpA/nostruct-align/1tzpA.t2k-thin90.a2m.gz, have 272614 columns in 1139 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n3lA/nostruct-align/1n3lA.t2k-thin90.a2m.gz # 1n3lA.t2k-thin90.a2m with 197 sequences, total weight= 171.081 avg weight= 0.868429 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30038 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n3lA/info/1n3lA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n3lA/nostruct-align/1n3lA.t2k-thin90.a2m.gz, have 272946 columns in 1140 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1us0A/nostruct-align/1us0A.t2k-thin90.a2m.gz # 1us0A.t2k-thin90.a2m with 988 sequences, total weight= 383.779 avg weight= 0.38844 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31352 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1us0A/info/1us0A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1us0A/nostruct-align/1us0A.t2k-thin90.a2m.gz, have 273259 columns in 1141 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l8rA/nostruct-align/1l8rA.t2k-thin90.a2m.gz # 1l8rA.t2k-thin90.a2m with 15 sequences, total weight= 6.17977 avg weight= 0.411985 19 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l8rA/info/1l8rA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1l8rA/nostruct-align/1l8rA.t2k-thin90.a2m.gz, have 273360 columns in 1142 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p9aG/nostruct-align/1p9aG.t2k-thin90.a2m.gz # 1p9aG.t2k-thin90.a2m with 2878 sequences, total weight= 2878 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.05711 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p9aG/info/1p9aG.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p9aG/nostruct-align/1p9aG.t2k-thin90.a2m.gz, have 273626 columns in 1143 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iqcA/nostruct-align/1iqcA.t2k-thin90.a2m.gz # 1iqcA.t2k-thin90.a2m with 83 sequences, total weight= 38.2548 avg weight= 0.460901 43 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iqcA/info/1iqcA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iqcA/nostruct-align/1iqcA.t2k-thin90.a2m.gz, have 273934 columns in 1144 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i0dA/nostruct-align/1i0dA.t2k-thin90.a2m.gz # 1i0dA.t2k-thin90.a2m with 30 sequences, total weight= 19.4033 avg weight= 0.646775 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i0dA/info/1i0dA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i0dA/nostruct-align/1i0dA.t2k-thin90.a2m.gz, have 274265 columns in 1145 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q7eA/nostruct-align/1q7eA.t2k-thin90.a2m.gz # 1q7eA.t2k-thin90.a2m with 342 sequences, total weight= 99.7995 avg weight= 0.291811 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30078 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q7eA/info/1q7eA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q7eA/nostruct-align/1q7eA.t2k-thin90.a2m.gz, have 274675 columns in 1146 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tvxA/nostruct-align/1tvxA.t2k-thin90.a2m.gz # 1tvxA.t2k-thin90.a2m with 153 sequences, total weight= 45.1277 avg weight= 0.294952 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tvxA/info/1tvxA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tvxA/nostruct-align/1tvxA.t2k-thin90.a2m.gz, have 274739 columns in 1147 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hz4A/nostruct-align/1hz4A.t2k-thin90.a2m.gz # 1hz4A.t2k-thin90.a2m with 11 sequences, total weight= 7.31653 avg weight= 0.665139 15 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hz4A/info/1hz4A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hz4A/nostruct-align/1hz4A.t2k-thin90.a2m.gz, have 275105 columns in 1148 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wer/nostruct-align/1wer.t2k-thin90.a2m.gz # 1wer.t2k-thin90.a2m with 50 sequences, total weight= 50 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23644 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wer/info/1wer.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wer/nostruct-align/1wer.t2k-thin90.a2m.gz, have 275429 columns in 1149 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1w0pA/nostruct-align/1w0pA.t2k-thin90.a2m.gz # 1w0pA.t2k-thin90.a2m with 66 sequences, total weight= 66 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.22841 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1w0pA/info/1w0pA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1w/1w0pA/nostruct-align/1w0pA.t2k-thin90.a2m.gz, have 276182 columns in 1150 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qe3A/nostruct-align/1qe3A.t2k-thin90.a2m.gz # 1qe3A.t2k-thin90.a2m with 374 sequences, total weight= 374 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14691 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qe3A/info/1qe3A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qe3A/nostruct-align/1qe3A.t2k-thin90.a2m.gz, have 276649 columns in 1151 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jz8A/nostruct-align/1jz8A.t2k-thin90.a2m.gz # 1jz8A.t2k-thin90.a2m with 193 sequences, total weight= 193 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15076 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jz8A/info/1jz8A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jz8A/nostruct-align/1jz8A.t2k-thin90.a2m.gz, have 277660 columns in 1152 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lkkA/nostruct-align/1lkkA.t2k-thin90.a2m.gz # 1lkkA.t2k-thin90.a2m with 221 sequences, total weight= 106.645 avg weight= 0.482558 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30164 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lkkA/info/1lkkA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lkkA/nostruct-align/1lkkA.t2k-thin90.a2m.gz, have 277765 columns in 1153 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qnaA/nostruct-align/1qnaA.t2k-thin90.a2m.gz # 1qnaA.t2k-thin90.a2m with 62 sequences, total weight= 19.2023 avg weight= 0.309715 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qnaA/info/1qnaA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qnaA/nostruct-align/1qnaA.t2k-thin90.a2m.gz, have 277947 columns in 1154 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n7oA/nostruct-align/1n7oA.t2k-thin90.a2m.gz # 1n7oA.t2k-thin90.a2m with 27 sequences, total weight= 21.1421 avg weight= 0.783042 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n7oA/info/1n7oA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n7oA/nostruct-align/1n7oA.t2k-thin90.a2m.gz, have 278668 columns in 1155 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r5lA/nostruct-align/1r5lA.t2k-thin90.a2m.gz # 1r5lA.t2k-thin90.a2m with 179 sequences, total weight= 179 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08834 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r5lA/info/1r5lA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r5lA/nostruct-align/1r5lA.t2k-thin90.a2m.gz, have 278919 columns in 1156 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1w/1wouA/nostruct-align/1wouA.t2k-thin90.a2m.gz # 1wouA.t2k-thin90.a2m with 119 sequences, total weight= 97.127 avg weight= 0.816194 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1w/1wouA/info/1wouA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1w/1wouA/nostruct-align/1wouA.t2k-thin90.a2m.gz, have 279038 columns in 1157 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ukfA/nostruct-align/1ukfA.t2k-thin90.a2m.gz # 1ukfA.t2k-thin90.a2m with 5 sequences, total weight= 4.84633 avg weight= 0.969267 10 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ukfA/info/1ukfA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ukfA/nostruct-align/1ukfA.t2k-thin90.a2m.gz, have 279226 columns in 1158 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jtgB/nostruct-align/1jtgB.t2k-thin90.a2m.gz # 1jtgB.t2k-thin90.a2m with 3 sequences, total weight= 3 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15327 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jtgB/info/1jtgB.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jtgB/nostruct-align/1jtgB.t2k-thin90.a2m.gz, have 279391 columns in 1159 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nz0A/nostruct-align/1nz0A.t2k-thin90.a2m.gz # 1nz0A.t2k-thin90.a2m with 94 sequences, total weight= 48.6494 avg weight= 0.517547 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nz0A/info/1nz0A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nz0A/nostruct-align/1nz0A.t2k-thin90.a2m.gz, have 279500 columns in 1160 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kw3B/nostruct-align/1kw3B.t2k-thin90.a2m.gz # 1kw3B.t2k-thin90.a2m with 125 sequences, total weight= 125 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25067 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kw3B/info/1kw3B.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kw3B/nostruct-align/1kw3B.t2k-thin90.a2m.gz, have 279788 columns in 1161 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iv3A/nostruct-align/1iv3A.t2k-thin90.a2m.gz # 1iv3A.t2k-thin90.a2m with 98 sequences, total weight= 10.055 avg weight= 0.102602 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iv3A/info/1iv3A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iv3A/nostruct-align/1iv3A.t2k-thin90.a2m.gz, have 279938 columns in 1162 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p5vA/nostruct-align/1p5vA.t2k-thin90.a2m.gz # 1p5vA.t2k-thin90.a2m with 123 sequences, total weight= 30.9041 avg weight= 0.251253 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p5vA/info/1p5vA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p5vA/nostruct-align/1p5vA.t2k-thin90.a2m.gz, have 280129 columns in 1163 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oi2A/nostruct-align/1oi2A.t2k-thin90.a2m.gz # 1oi2A.t2k-thin90.a2m with 75 sequences, total weight= 11.1764 avg weight= 0.149019 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oi2A/info/1oi2A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oi2A/nostruct-align/1oi2A.t2k-thin90.a2m.gz, have 280465 columns in 1164 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jf8A/nostruct-align/1jf8A.t2k-thin90.a2m.gz # 1jf8A.t2k-thin90.a2m with 165 sequences, total weight= 81.0359 avg weight= 0.491127 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30067 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jf8A/info/1jf8A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jf8A/nostruct-align/1jf8A.t2k-thin90.a2m.gz, have 280595 columns in 1165 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b6a/nostruct-align/1b6a.t2k-thin90.a2m.gz # 1b6a.t2k-thin90.a2m with 279 sequences, total weight= 175.075 avg weight= 0.627509 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30093 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b6a/info/1b6a.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1b/1b6a/nostruct-align/1b6a.t2k-thin90.a2m.gz, have 280950 columns in 1166 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gudA/nostruct-align/1gudA.t2k-thin90.a2m.gz # 1gudA.t2k-thin90.a2m with 587 sequences, total weight= 587 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.996157 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gudA/info/1gudA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gudA/nostruct-align/1gudA.t2k-thin90.a2m.gz, have 281238 columns in 1167 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k7iA/nostruct-align/1k7iA.t2k-thin90.a2m.gz # 1k7iA.t2k-thin90.a2m with 509 sequences, total weight= 509 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15709 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k7iA/info/1k7iA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k7iA/nostruct-align/1k7iA.t2k-thin90.a2m.gz, have 281700 columns in 1168 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a8o/nostruct-align/1a8o.t2k-thin90.a2m.gz # 1a8o.t2k-thin90.a2m with 103 sequences, total weight= 14.6711 avg weight= 0.142438 36 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a8o/info/1a8o.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1a/1a8o/nostruct-align/1a8o.t2k-thin90.a2m.gz, have 281770 columns in 1169 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ew4A/nostruct-align/1ew4A.t2k-thin90.a2m.gz # 1ew4A.t2k-thin90.a2m with 40 sequences, total weight= 13.7324 avg weight= 0.34331 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ew4A/info/1ew4A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ew4A/nostruct-align/1ew4A.t2k-thin90.a2m.gz, have 281876 columns in 1170 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3v/3vub/nostruct-align/3vub.t2k-thin90.a2m.gz # 3vub.t2k-thin90.a2m with 6 sequences, total weight= 5.28421 avg weight= 0.880701 14 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3v/3vub/info/3vub.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/3v/3vub/nostruct-align/3vub.t2k-thin90.a2m.gz, have 281977 columns in 1171 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2baa/nostruct-align/2baa.t2k-thin90.a2m.gz # 2baa.t2k-thin90.a2m with 147 sequences, total weight= 21.0227 avg weight= 0.143012 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2baa/info/2baa.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/2b/2baa/nostruct-align/2baa.t2k-thin90.a2m.gz, have 282220 columns in 1172 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2f/2fdn/nostruct-align/2fdn.t2k-thin90.a2m.gz # 2fdn.t2k-thin90.a2m with 972 sequences, total weight= 86.5781 avg weight= 0.0890721 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30217 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2f/2fdn/info/2fdn.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/2f/2fdn/nostruct-align/2fdn.t2k-thin90.a2m.gz, have 282275 columns in 1173 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l6xA/nostruct-align/1l6xA.t2k-thin90.a2m.gz # 1l6xA.t2k-thin90.a2m with 2056 sequences, total weight= 2056 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02312 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l6xA/info/1l6xA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1l6xA/nostruct-align/1l6xA.t2k-thin90.a2m.gz, have 282482 columns in 1174 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1smbA/nostruct-align/1smbA.t2k-thin90.a2m.gz # 1smbA.t2k-thin90.a2m with 362 sequences, total weight= 143.667 avg weight= 0.396869 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30364 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1smbA/info/1smbA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1smbA/nostruct-align/1smbA.t2k-thin90.a2m.gz, have 282631 columns in 1175 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mxrA/nostruct-align/1mxrA.t2k-thin90.a2m.gz # 1mxrA.t2k-thin90.a2m with 132 sequences, total weight= 83.8114 avg weight= 0.634935 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mxrA/info/1mxrA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mxrA/nostruct-align/1mxrA.t2k-thin90.a2m.gz, have 282970 columns in 1176 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t82A/nostruct-align/1t82A.t2k-thin90.a2m.gz # 1t82A.t2k-thin90.a2m with 17 sequences, total weight= 9.02422 avg weight= 0.530836 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t82A/info/1t82A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t82A/nostruct-align/1t82A.t2k-thin90.a2m.gz, have 283113 columns in 1177 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n6aA/nostruct-align/1n6aA.t2k-thin90.a2m.gz # 1n6aA.t2k-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.616476 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n6aA/info/1n6aA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n6aA/nostruct-align/1n6aA.t2k-thin90.a2m.gz, have 283347 columns in 1178 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ecsA/nostruct-align/1ecsA.t2k-thin90.a2m.gz # 1ecsA.t2k-thin90.a2m with 88 sequences, total weight= 88 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09141 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ecsA/info/1ecsA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ecsA/nostruct-align/1ecsA.t2k-thin90.a2m.gz, have 283467 columns in 1179 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f7dA/nostruct-align/1f7dA.t2k-thin90.a2m.gz # 1f7dA.t2k-thin90.a2m with 337 sequences, total weight= 165.074 avg weight= 0.489834 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30049 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f7dA/info/1f7dA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f7dA/nostruct-align/1f7dA.t2k-thin90.a2m.gz, have 283585 columns in 1180 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lk9A/nostruct-align/1lk9A.t2k-thin90.a2m.gz # 1lk9A.t2k-thin90.a2m with 64 sequences, total weight= 43.0491 avg weight= 0.672642 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lk9A/info/1lk9A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lk9A/nostruct-align/1lk9A.t2k-thin90.a2m.gz, have 284010 columns in 1181 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pmhX/nostruct-align/1pmhX.t2k-thin90.a2m.gz # 1pmhX.t2k-thin90.a2m with 9 sequences, total weight= 8.11525 avg weight= 0.901694 15 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pmhX/info/1pmhX.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pmhX/nostruct-align/1pmhX.t2k-thin90.a2m.gz, have 284193 columns in 1182 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m1qA/nostruct-align/1m1qA.t2k-thin90.a2m.gz # 1m1qA.t2k-thin90.a2m with 22 sequences, total weight= 22 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19536 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m1qA/info/1m1qA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m1qA/nostruct-align/1m1qA.t2k-thin90.a2m.gz, have 284283 columns in 1183 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nnxA/nostruct-align/1nnxA.t2k-thin90.a2m.gz # 1nnxA.t2k-thin90.a2m with 25 sequences, total weight= 12.1938 avg weight= 0.48775 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nnxA/info/1nnxA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nnxA/nostruct-align/1nnxA.t2k-thin90.a2m.gz, have 284376 columns in 1184 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ouwA/nostruct-align/1ouwA.t2k-thin90.a2m.gz # 1ouwA.t2k-thin90.a2m with 174 sequences, total weight= 64.9495 avg weight= 0.373273 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ouwA/info/1ouwA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ouwA/nostruct-align/1ouwA.t2k-thin90.a2m.gz, have 284525 columns in 1185 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fm0D/nostruct-align/1fm0D.t2k-thin90.a2m.gz # 1fm0D.t2k-thin90.a2m with 119 sequences, total weight= 39.3672 avg weight= 0.330817 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fm0D/info/1fm0D.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fm0D/nostruct-align/1fm0D.t2k-thin90.a2m.gz, have 284606 columns in 1186 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h99A/nostruct-align/1h99A.t2k-thin90.a2m.gz # 1h99A.t2k-thin90.a2m with 133 sequences, total weight= 133 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08744 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h99A/info/1h99A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h99A/nostruct-align/1h99A.t2k-thin90.a2m.gz, have 284826 columns in 1187 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oksA/nostruct-align/1oksA.t2k-thin90.a2m.gz # 1oksA.t2k-thin90.a2m with 5 sequences, total weight= 3.56796 avg weight= 0.713591 11 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oksA/info/1oksA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oksA/nostruct-align/1oksA.t2k-thin90.a2m.gz, have 284879 columns in 1188 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1c9oA/nostruct-align/1c9oA.t2k-thin90.a2m.gz # 1c9oA.t2k-thin90.a2m with 159 sequences, total weight= 15.7415 avg weight= 0.099003 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1c9oA/info/1c9oA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1c/1c9oA/nostruct-align/1c9oA.t2k-thin90.a2m.gz, have 284945 columns in 1189 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pa1A/nostruct-align/1pa1A.t2k-thin90.a2m.gz # 1pa1A.t2k-thin90.a2m with 336 sequences, total weight= 336 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25141 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pa1A/info/1pa1A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pa1A/nostruct-align/1pa1A.t2k-thin90.a2m.gz, have 285247 columns in 1190 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hd2A/nostruct-align/1hd2A.t2k-thin90.a2m.gz # 1hd2A.t2k-thin90.a2m with 447 sequences, total weight= 115.117 avg weight= 0.257532 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3033 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hd2A/info/1hd2A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hd2A/nostruct-align/1hd2A.t2k-thin90.a2m.gz, have 285408 columns in 1191 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iq6A/nostruct-align/1iq6A.t2k-thin90.a2m.gz # 1iq6A.t2k-thin90.a2m with 213 sequences, total weight= 213 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24408 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iq6A/info/1iq6A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iq6A/nostruct-align/1iq6A.t2k-thin90.a2m.gz, have 285540 columns in 1192 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ummA/nostruct-align/1ummA.t2k-thin90.a2m.gz # 1ummA.t2k-thin90.a2m with 260 sequences, total weight= 260 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25455 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ummA/info/1ummA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ummA/nostruct-align/1ummA.t2k-thin90.a2m.gz, have 285689 columns in 1193 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2arcA/nostruct-align/2arcA.t2k-thin90.a2m.gz # 2arcA.t2k-thin90.a2m with 21 sequences, total weight= 21 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27763 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2arcA/info/2arcA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/2a/2arcA/nostruct-align/2arcA.t2k-thin90.a2m.gz, have 285850 columns in 1194 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f6bA/nostruct-align/1f6bA.t2k-thin90.a2m.gz # 1f6bA.t2k-thin90.a2m with 702 sequences, total weight= 702 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15396 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f6bA/info/1f6bA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f6bA/nostruct-align/1f6bA.t2k-thin90.a2m.gz, have 286026 columns in 1195 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nfp/nostruct-align/1nfp.t2k-thin90.a2m.gz # 1nfp.t2k-thin90.a2m with 26 sequences, total weight= 23.2949 avg weight= 0.895956 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nfp/info/1nfp.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nfp/nostruct-align/1nfp.t2k-thin90.a2m.gz, have 286254 columns in 1196 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gppA/nostruct-align/1gppA.t2k-thin90.a2m.gz # 1gppA.t2k-thin90.a2m with 23 sequences, total weight= 15.0935 avg weight= 0.656238 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gppA/info/1gppA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gppA/nostruct-align/1gppA.t2k-thin90.a2m.gz, have 286471 columns in 1197 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pwxA/nostruct-align/1pwxA.t2k-thin90.a2m.gz # 1pwxA.t2k-thin90.a2m with 2669 sequences, total weight= 323.772 avg weight= 0.121308 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.32978 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pwxA/info/1pwxA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pwxA/nostruct-align/1pwxA.t2k-thin90.a2m.gz, have 286723 columns in 1198 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1es9A/nostruct-align/1es9A.t2k-thin90.a2m.gz # 1es9A.t2k-thin90.a2m with 77 sequences, total weight= 77 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08556 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1es9A/info/1es9A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1es9A/nostruct-align/1es9A.t2k-thin90.a2m.gz, have 286935 columns in 1199 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eca/nostruct-align/1eca.t2k-thin90.a2m.gz # 1eca.t2k-thin90.a2m with 187 sequences, total weight= 80.9916 avg weight= 0.43311 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30155 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eca/info/1eca.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1eca/nostruct-align/1eca.t2k-thin90.a2m.gz, have 287071 columns in 1200 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q7lA/nostruct-align/1q7lA.t2k-thin90.a2m.gz # 1q7lA.t2k-thin90.a2m with 355 sequences, total weight= 355 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1942 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q7lA/info/1q7lA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q7lA/nostruct-align/1q7lA.t2k-thin90.a2m.gz, have 287263 columns in 1201 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1ja1A/nostruct-align/1ja1A.t2k-thin90.a2m.gz # 1ja1A.t2k-thin90.a2m with 200 sequences, total weight= 200 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27753 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1ja1A/info/1ja1A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1ja1A/nostruct-align/1ja1A.t2k-thin90.a2m.gz, have 287879 columns in 1202 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h6fA/nostruct-align/1h6fA.t2k-thin90.a2m.gz # 1h6fA.t2k-thin90.a2m with 93 sequences, total weight= 15.9342 avg weight= 0.171335 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h6fA/info/1h6fA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h6fA/nostruct-align/1h6fA.t2k-thin90.a2m.gz, have 288063 columns in 1203 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1te2A/nostruct-align/1te2A.t2k-thin90.a2m.gz # 1te2A.t2k-thin90.a2m with 821 sequences, total weight= 821 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07869 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1te2A/info/1te2A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1te2A/nostruct-align/1te2A.t2k-thin90.a2m.gz, have 288281 columns in 1204 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v54F/nostruct-align/1v54F.t2k-thin90.a2m.gz # 1v54F.t2k-thin90.a2m with 19 sequences, total weight= 9.67921 avg weight= 0.509432 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v54F/info/1v54F.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v54F/nostruct-align/1v54F.t2k-thin90.a2m.gz, have 288379 columns in 1205 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1y/1yge/nostruct-align/1yge.t2k-thin90.a2m.gz # 1yge.t2k-thin90.a2m with 113 sequences, total weight= 26.9548 avg weight= 0.238538 37 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1y/1yge/info/1yge.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1y/1yge/nostruct-align/1yge.t2k-thin90.a2m.gz, have 289218 columns in 1206 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1in6A/nostruct-align/1in6A.t2k-thin90.a2m.gz # 1in6A.t2k-thin90.a2m with 1586 sequences, total weight= 1586 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04313 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1in6A/info/1in6A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1in6A/nostruct-align/1in6A.t2k-thin90.a2m.gz, have 289518 columns in 1207 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u4bA/nostruct-align/1u4bA.t2k-thin90.a2m.gz # 1u4bA.t2k-thin90.a2m with 302 sequences, total weight= 302 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27431 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u4bA/info/1u4bA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1u4bA/nostruct-align/1u4bA.t2k-thin90.a2m.gz, have 290098 columns in 1208 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uptB/nostruct-align/1uptB.t2k-thin90.a2m.gz # 1uptB.t2k-thin90.a2m with 4 sequences, total weight= 3.47726 avg weight= 0.869315 10 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uptB/info/1uptB.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uptB/nostruct-align/1uptB.t2k-thin90.a2m.gz, have 290156 columns in 1209 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p57A/nostruct-align/1p57A.t2k-thin90.a2m.gz # 1p57A.t2k-thin90.a2m with 2 sequences, total weight= 1.80962 avg weight= 0.904812 7 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p57A/info/1p57A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p57A/nostruct-align/1p57A.t2k-thin90.a2m.gz, have 290266 columns in 1210 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vlyA/nostruct-align/1vlyA.t2k-thin90.a2m.gz # 1vlyA.t2k-thin90.a2m with 146 sequences, total weight= 146 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1757 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vlyA/info/1vlyA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vlyA/nostruct-align/1vlyA.t2k-thin90.a2m.gz, have 290589 columns in 1211 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1u7iA/nostruct-align/1u7iA.t2k-thin90.a2m.gz # 1u7iA.t2k-thin90.a2m with 127 sequences, total weight= 71.3046 avg weight= 0.561453 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1u7iA/info/1u7iA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1u7iA/nostruct-align/1u7iA.t2k-thin90.a2m.gz, have 290723 columns in 1212 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o4vA/nostruct-align/1o4vA.t2k-thin90.a2m.gz # 1o4vA.t2k-thin90.a2m with 159 sequences, total weight= 19.0418 avg weight= 0.11976 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o4vA/info/1o4vA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o4vA/nostruct-align/1o4vA.t2k-thin90.a2m.gz, have 290892 columns in 1213 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gq8A/nostruct-align/1gq8A.t2k-thin90.a2m.gz # 1gq8A.t2k-thin90.a2m with 178 sequences, total weight= 35.0041 avg weight= 0.196652 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gq8A/info/1gq8A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gq8A/nostruct-align/1gq8A.t2k-thin90.a2m.gz, have 291211 columns in 1214 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m2dA/nostruct-align/1m2dA.t2k-thin90.a2m.gz # 1m2dA.t2k-thin90.a2m with 106 sequences, total weight= 101.196 avg weight= 0.954676 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m2dA/info/1m2dA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m2dA/nostruct-align/1m2dA.t2k-thin90.a2m.gz, have 291312 columns in 1215 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1khiA/nostruct-align/1khiA.t2k-thin90.a2m.gz # 1khiA.t2k-thin90.a2m with 41 sequences, total weight= 10.6751 avg weight= 0.260369 24 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1khiA/info/1khiA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1khiA/nostruct-align/1khiA.t2k-thin90.a2m.gz, have 291459 columns in 1216 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mqkH/nostruct-align/1mqkH.t2k-thin90.a2m.gz # 1mqkH.t2k-thin90.a2m with 8267 sequences, total weight= 32.035 avg weight= 0.00387505 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mqkH/info/1mqkH.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mqkH/nostruct-align/1mqkH.t2k-thin90.a2m.gz, have 291582 columns in 1217 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m7gA/nostruct-align/1m7gA.t2k-thin90.a2m.gz # 1m7gA.t2k-thin90.a2m with 130 sequences, total weight= 24.2816 avg weight= 0.186782 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m7gA/info/1m7gA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m7gA/nostruct-align/1m7gA.t2k-thin90.a2m.gz, have 291790 columns in 1218 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f46A/nostruct-align/1f46A.t2k-thin90.a2m.gz # 1f46A.t2k-thin90.a2m with 23 sequences, total weight= 13.8981 avg weight= 0.604265 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f46A/info/1f46A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f46A/nostruct-align/1f46A.t2k-thin90.a2m.gz, have 291929 columns in 1219 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gkmA/nostruct-align/1gkmA.t2k-thin90.a2m.gz # 1gkmA.t2k-thin90.a2m with 126 sequences, total weight= 20.1006 avg weight= 0.159528 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gkmA/info/1gkmA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gkmA/nostruct-align/1gkmA.t2k-thin90.a2m.gz, have 292438 columns in 1220 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tu9A/nostruct-align/1tu9A.t2k-thin90.a2m.gz # 1tu9A.t2k-thin90.a2m with 37 sequences, total weight= 25.5354 avg weight= 0.690147 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tu9A/info/1tu9A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tu9A/nostruct-align/1tu9A.t2k-thin90.a2m.gz, have 292569 columns in 1221 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ru4A/nostruct-align/1ru4A.t2k-thin90.a2m.gz # 1ru4A.t2k-thin90.a2m with 246 sequences, total weight= 246 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.982651 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ru4A/info/1ru4A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1ru4A/nostruct-align/1ru4A.t2k-thin90.a2m.gz, have 292969 columns in 1222 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m33A/nostruct-align/1m33A.t2k-thin90.a2m.gz # 1m33A.t2k-thin90.a2m with 1102 sequences, total weight= 1102 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.835122 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m33A/info/1m33A.stride-mixed.CB-burial-14-7 WARNING: skipping c, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1m/1m33A/nostruct-align/1m33A.t2k-thin90.a2m.gz, have 293224 columns in 1223 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t4hA/nostruct-align/1t4hA.t2k-thin90.a2m.gz # 1t4hA.t2k-thin90.a2m with 8073 sequences, total weight= 8073 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16985 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t4hA/info/1t4hA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t4hA/nostruct-align/1t4hA.t2k-thin90.a2m.gz, have 293494 columns in 1224 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1igqA/nostruct-align/1igqA.t2k-thin90.a2m.gz # 1igqA.t2k-thin90.a2m with 5 sequences, total weight= 3.12428 avg weight= 0.624856 11 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1igqA/info/1igqA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1igqA/nostruct-align/1igqA.t2k-thin90.a2m.gz, have 293548 columns in 1225 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mtyD/nostruct-align/1mtyD.t2k-thin90.a2m.gz # 1mtyD.t2k-thin90.a2m with 52 sequences, total weight= 26.5498 avg weight= 0.510572 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mtyD/info/1mtyD.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mtyD/nostruct-align/1mtyD.t2k-thin90.a2m.gz, have 294060 columns in 1226 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rxqA/nostruct-align/1rxqA.t2k-thin90.a2m.gz # 1rxqA.t2k-thin90.a2m with 23 sequences, total weight= 23 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12166 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rxqA/info/1rxqA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rxqA/nostruct-align/1rxqA.t2k-thin90.a2m.gz, have 294234 columns in 1227 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i24A/nostruct-align/1i24A.t2k-thin90.a2m.gz # 1i24A.t2k-thin90.a2m with 726 sequences, total weight= 726 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28473 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i24A/info/1i24A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i24A/nostruct-align/1i24A.t2k-thin90.a2m.gz, have 294626 columns in 1228 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o98A/nostruct-align/1o98A.t2k-thin90.a2m.gz # 1o98A.t2k-thin90.a2m with 175 sequences, total weight= 175 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25207 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o98A/info/1o98A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o98A/nostruct-align/1o98A.t2k-thin90.a2m.gz, have 295135 columns in 1229 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dk8A/nostruct-align/1dk8A.t2k-thin90.a2m.gz # 1dk8A.t2k-thin90.a2m with 99 sequences, total weight= 99 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28687 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dk8A/info/1dk8A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dk8A/nostruct-align/1dk8A.t2k-thin90.a2m.gz, have 295282 columns in 1230 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qnrA/nostruct-align/1qnrA.t2k-thin90.a2m.gz # 1qnrA.t2k-thin90.a2m with 97 sequences, total weight= 97 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.966112 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qnrA/info/1qnrA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qnrA/nostruct-align/1qnrA.t2k-thin90.a2m.gz, have 295626 columns in 1231 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eokA/nostruct-align/1eokA.t2k-thin90.a2m.gz # 1eokA.t2k-thin90.a2m with 32 sequences, total weight= 32 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09506 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eokA/info/1eokA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1eokA/nostruct-align/1eokA.t2k-thin90.a2m.gz, have 295908 columns in 1232 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uehA/nostruct-align/1uehA.t2k-thin90.a2m.gz # 1uehA.t2k-thin90.a2m with 188 sequences, total weight= 26.7944 avg weight= 0.142524 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uehA/info/1uehA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uehA/nostruct-align/1uehA.t2k-thin90.a2m.gz, have 296122 columns in 1233 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3p/3pviA/nostruct-align/3pviA.t2k-thin90.a2m.gz # 3pviA.t2k-thin90.a2m with 2 sequences, total weight= 2 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24461 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3p/3pviA/info/3pviA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/3p/3pviA/nostruct-align/3pviA.t2k-thin90.a2m.gz, have 296278 columns in 1234 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sh8A/nostruct-align/1sh8A.t2k-thin90.a2m.gz # 1sh8A.t2k-thin90.a2m with 111 sequences, total weight= 111 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14662 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sh8A/info/1sh8A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sh8A/nostruct-align/1sh8A.t2k-thin90.a2m.gz, have 296431 columns in 1235 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m6kA/nostruct-align/1m6kA.t2k-thin90.a2m.gz # 1m6kA.t2k-thin90.a2m with 45 sequences, total weight= 45 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27895 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m6kA/info/1m6kA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m6kA/nostruct-align/1m6kA.t2k-thin90.a2m.gz, have 296681 columns in 1236 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tr0A/nostruct-align/1tr0A.t2k-thin90.a2m.gz # 1tr0A.t2k-thin90.a2m with 42 sequences, total weight= 40.8932 avg weight= 0.973648 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tr0A/info/1tr0A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tr0A/nostruct-align/1tr0A.t2k-thin90.a2m.gz, have 296787 columns in 1237 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bg6/nostruct-align/1bg6.t2k-thin90.a2m.gz # 1bg6.t2k-thin90.a2m with 410 sequences, total weight= 410 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.980066 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bg6/info/1bg6.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bg6/nostruct-align/1bg6.t2k-thin90.a2m.gz, have 297136 columns in 1238 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1idpA/nostruct-align/1idpA.t2k-thin90.a2m.gz # 1idpA.t2k-thin90.a2m with 6 sequences, total weight= 2.47098 avg weight= 0.41183 10 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1idpA/info/1idpA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1idpA/nostruct-align/1idpA.t2k-thin90.a2m.gz, have 297283 columns in 1239 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1n7hA/nostruct-align/1n7hA.t2k-thin90.a2m.gz # 1n7hA.t2k-thin90.a2m with 891 sequences, total weight= 891 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1709 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1n7hA/info/1n7hA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1n7hA/nostruct-align/1n7hA.t2k-thin90.a2m.gz, have 297614 columns in 1240 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r2zA/nostruct-align/1r2zA.t2k-thin90.a2m.gz # 1r2zA.t2k-thin90.a2m with 137 sequences, total weight= 51.7177 avg weight= 0.377502 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r2zA/info/1r2zA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r2zA/nostruct-align/1r2zA.t2k-thin90.a2m.gz, have 297887 columns in 1241 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uq5A/nostruct-align/1uq5A.t2k-thin90.a2m.gz # 1uq5A.t2k-thin90.a2m with 86 sequences, total weight= 56.6818 avg weight= 0.659091 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uq5A/info/1uq5A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uq5A/nostruct-align/1uq5A.t2k-thin90.a2m.gz, have 298150 columns in 1242 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nwwA/nostruct-align/1nwwA.t2k-thin90.a2m.gz # 1nwwA.t2k-thin90.a2m with 29 sequences, total weight= 29 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11869 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nwwA/info/1nwwA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nwwA/nostruct-align/1nwwA.t2k-thin90.a2m.gz, have 298295 columns in 1243 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oxjA/nostruct-align/1oxjA.t2k-thin90.a2m.gz # 1oxjA.t2k-thin90.a2m with 14 sequences, total weight= 9.72502 avg weight= 0.694644 15 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oxjA/info/1oxjA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oxjA/nostruct-align/1oxjA.t2k-thin90.a2m.gz, have 298465 columns in 1244 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2b/2bbkH/nostruct-align/2bbkH.t2k-thin90.a2m.gz # 2bbkH.t2k-thin90.a2m with 9 sequences, total weight= 6.55294 avg weight= 0.728104 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2b/2bbkH/info/2bbkH.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/2b/2bbkH/nostruct-align/2bbkH.t2k-thin90.a2m.gz, have 298820 columns in 1245 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i6lA/nostruct-align/1i6lA.t2k-thin90.a2m.gz # 1i6lA.t2k-thin90.a2m with 244 sequences, total weight= 76.3138 avg weight= 0.312762 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30097 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i6lA/info/1i6lA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i6lA/nostruct-align/1i6lA.t2k-thin90.a2m.gz, have 299146 columns in 1246 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i52A/nostruct-align/1i52A.t2k-thin90.a2m.gz # 1i52A.t2k-thin90.a2m with 243 sequences, total weight= 243 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.12186 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i52A/info/1i52A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i52A/nostruct-align/1i52A.t2k-thin90.a2m.gz, have 299371 columns in 1247 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2t/2tgi/nostruct-align/2tgi.t2k-thin90.a2m.gz # 2tgi.t2k-thin90.a2m with 136 sequences, total weight= 36.8852 avg weight= 0.271215 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2t/2tgi/info/2tgi.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/2t/2tgi/nostruct-align/2tgi.t2k-thin90.a2m.gz, have 299483 columns in 1248 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1l3kA/nostruct-align/1l3kA.t2k-thin90.a2m.gz # 1l3kA.t2k-thin90.a2m with 972 sequences, total weight= 972 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21248 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1l3kA/info/1l3kA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1l3kA/nostruct-align/1l3kA.t2k-thin90.a2m.gz, have 299646 columns in 1249 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qv1A/nostruct-align/1qv1A.t2k-thin90.a2m.gz # 1qv1A.t2k-thin90.a2m with 561 sequences, total weight= 561 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14169 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qv1A/info/1qv1A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qv1A/nostruct-align/1qv1A.t2k-thin90.a2m.gz, have 299833 columns in 1250 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k77A/nostruct-align/1k77A.t2k-thin90.a2m.gz # 1k77A.t2k-thin90.a2m with 132 sequences, total weight= 132 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21444 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k77A/info/1k77A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k77A/nostruct-align/1k77A.t2k-thin90.a2m.gz, have 300093 columns in 1251 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rzhM/nostruct-align/1rzhM.t2k-thin90.a2m.gz # 1rzhM.t2k-thin90.a2m with 170 sequences, total weight= 15.489 avg weight= 0.0911118 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rzhM/info/1rzhM.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rzhM/nostruct-align/1rzhM.t2k-thin90.a2m.gz, have 300394 columns in 1252 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iu8A/nostruct-align/1iu8A.t2k-thin90.a2m.gz # 1iu8A.t2k-thin90.a2m with 52 sequences, total weight= 24.6114 avg weight= 0.473296 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iu8A/info/1iu8A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iu8A/nostruct-align/1iu8A.t2k-thin90.a2m.gz, have 300600 columns in 1253 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jh6A/nostruct-align/1jh6A.t2k-thin90.a2m.gz # 1jh6A.t2k-thin90.a2m with 3 sequences, total weight= 3 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03635 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jh6A/info/1jh6A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jh6A/nostruct-align/1jh6A.t2k-thin90.a2m.gz, have 300781 columns in 1254 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jl0A/nostruct-align/1jl0A.t2k-thin90.a2m.gz # 1jl0A.t2k-thin90.a2m with 54 sequences, total weight= 16.0167 avg weight= 0.296606 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jl0A/info/1jl0A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jl0A/nostruct-align/1jl0A.t2k-thin90.a2m.gz, have 301091 columns in 1255 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a92A/nostruct-align/1a92A.t2k-thin90.a2m.gz # 1a92A.t2k-thin90.a2m with 19 sequences, total weight= 2.75484 avg weight= 0.144991 15 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a92A/info/1a92A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1a/1a92A/nostruct-align/1a92A.t2k-thin90.a2m.gz, have 301141 columns in 1256 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t6eX/nostruct-align/1t6eX.t2k-thin90.a2m.gz # 1t6eX.t2k-thin90.a2m with 179 sequences, total weight= 175.562 avg weight= 0.980791 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t6eX/info/1t6eX.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t6eX/nostruct-align/1t6eX.t2k-thin90.a2m.gz, have 301503 columns in 1257 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q8dA/nostruct-align/1q8dA.t2k-thin90.a2m.gz # 1q8dA.t2k-thin90.a2m with 24 sequences, total weight= 7.17686 avg weight= 0.299036 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q8dA/info/1q8dA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q8dA/nostruct-align/1q8dA.t2k-thin90.a2m.gz, have 301603 columns in 1258 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o08A/nostruct-align/1o08A.t2k-thin90.a2m.gz # 1o08A.t2k-thin90.a2m with 579 sequences, total weight= 579 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02241 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o08A/info/1o08A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o08A/nostruct-align/1o08A.t2k-thin90.a2m.gz, have 301824 columns in 1259 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dbxA/nostruct-align/1dbxA.t2k-thin90.a2m.gz # 1dbxA.t2k-thin90.a2m with 147 sequences, total weight= 82.6304 avg weight= 0.562111 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30048 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dbxA/info/1dbxA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dbxA/nostruct-align/1dbxA.t2k-thin90.a2m.gz, have 301976 columns in 1260 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jbeA/nostruct-align/1jbeA.t2k-thin90.a2m.gz # 1jbeA.t2k-thin90.a2m with 1602 sequences, total weight= 585.78 avg weight= 0.365655 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31845 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jbeA/info/1jbeA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jbeA/nostruct-align/1jbeA.t2k-thin90.a2m.gz, have 302102 columns in 1261 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jubA/nostruct-align/1jubA.t2k-thin90.a2m.gz # 1jubA.t2k-thin90.a2m with 243 sequences, total weight= 243 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.23674 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jubA/info/1jubA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jubA/nostruct-align/1jubA.t2k-thin90.a2m.gz, have 302413 columns in 1262 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oflA/nostruct-align/1oflA.t2k-thin90.a2m.gz # 1oflA.t2k-thin90.a2m with 29 sequences, total weight= 29 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08628 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oflA/info/1oflA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oflA/nostruct-align/1oflA.t2k-thin90.a2m.gz, have 302894 columns in 1263 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vhnA/nostruct-align/1vhnA.t2k-thin90.a2m.gz # 1vhnA.t2k-thin90.a2m with 307 sequences, total weight= 307 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27712 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vhnA/info/1vhnA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vhnA/nostruct-align/1vhnA.t2k-thin90.a2m.gz, have 303199 columns in 1264 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lyqA/nostruct-align/1lyqA.t2k-thin90.a2m.gz # 1lyqA.t2k-thin90.a2m with 42 sequences, total weight= 20.379 avg weight= 0.485214 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lyqA/info/1lyqA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lyqA/nostruct-align/1lyqA.t2k-thin90.a2m.gz, have 303300 columns in 1265 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r29A/nostruct-align/1r29A.t2k-thin90.a2m.gz # 1r29A.t2k-thin90.a2m with 558 sequences, total weight= 558 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27248 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r29A/info/1r29A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r29A/nostruct-align/1r29A.t2k-thin90.a2m.gz, have 303422 columns in 1266 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rwjA/nostruct-align/1rwjA.t2k-thin90.a2m.gz # 1rwjA.t2k-thin90.a2m with 26 sequences, total weight= 8.21365 avg weight= 0.315909 29 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rwjA/info/1rwjA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rwjA/nostruct-align/1rwjA.t2k-thin90.a2m.gz, have 303503 columns in 1267 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dmgA/nostruct-align/1dmgA.t2k-thin90.a2m.gz # 1dmgA.t2k-thin90.a2m with 150 sequences, total weight= 59.5052 avg weight= 0.396701 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dmgA/info/1dmgA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dmgA/nostruct-align/1dmgA.t2k-thin90.a2m.gz, have 303675 columns in 1268 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ofzA/nostruct-align/1ofzA.t2k-thin90.a2m.gz # 1ofzA.t2k-thin90.a2m with 4 sequences, total weight= 3.78639 avg weight= 0.946597 9 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ofzA/info/1ofzA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ofzA/nostruct-align/1ofzA.t2k-thin90.a2m.gz, have 303987 columns in 1269 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1s5uA/nostruct-align/1s5uA.t2k-thin90.a2m.gz # 1s5uA.t2k-thin90.a2m with 237 sequences, total weight= 237 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20398 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1s5uA/info/1s5uA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1s5uA/nostruct-align/1s5uA.t2k-thin90.a2m.gz, have 304116 columns in 1270 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gs9A/nostruct-align/1gs9A.t2k-thin90.a2m.gz # 1gs9A.t2k-thin90.a2m with 70 sequences, total weight= 39.4571 avg weight= 0.563674 43 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gs9A/info/1gs9A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gs9A/nostruct-align/1gs9A.t2k-thin90.a2m.gz, have 304260 columns in 1271 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pg6A/nostruct-align/1pg6A.t2k-thin90.a2m.gz # 1pg6A.t2k-thin90.a2m with 80 sequences, total weight= 59.1802 avg weight= 0.739753 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pg6A/info/1pg6A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pg6A/nostruct-align/1pg6A.t2k-thin90.a2m.gz, have 304476 columns in 1272 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hqsA/nostruct-align/1hqsA.t2k-thin90.a2m.gz # 1hqsA.t2k-thin90.a2m with 206 sequences, total weight= 39.6736 avg weight= 0.19259 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hqsA/info/1hqsA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hqsA/nostruct-align/1hqsA.t2k-thin90.a2m.gz, have 304899 columns in 1273 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1ny1A/nostruct-align/1ny1A.t2k-thin90.a2m.gz # 1ny1A.t2k-thin90.a2m with 268 sequences, total weight= 268 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09725 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1ny1A/info/1ny1A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1ny1A/nostruct-align/1ny1A.t2k-thin90.a2m.gz, have 305134 columns in 1274 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1ntyA/nostruct-align/1ntyA.t2k-thin90.a2m.gz # 1ntyA.t2k-thin90.a2m with 392 sequences, total weight= 392 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09141 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1ntyA/info/1ntyA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1ntyA/nostruct-align/1ntyA.t2k-thin90.a2m.gz, have 305439 columns in 1275 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o1yA/nostruct-align/1o1yA.t2k-thin90.a2m.gz # 1o1yA.t2k-thin90.a2m with 539 sequences, total weight= 539 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.14823 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o1yA/info/1o1yA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o1yA/nostruct-align/1o1yA.t2k-thin90.a2m.gz, have 305669 columns in 1276 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hyp/nostruct-align/1hyp.t2k-thin90.a2m.gz # 1hyp.t2k-thin90.a2m with 70 sequences, total weight= 7.1961 avg weight= 0.102801 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hyp/info/1hyp.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hyp/nostruct-align/1hyp.t2k-thin90.a2m.gz, have 305744 columns in 1277 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1izcA/nostruct-align/1izcA.t2k-thin90.a2m.gz # 1izcA.t2k-thin90.a2m with 91 sequences, total weight= 74.4906 avg weight= 0.818578 35 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1izcA/info/1izcA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1izcA/nostruct-align/1izcA.t2k-thin90.a2m.gz, have 306043 columns in 1278 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k8uA/nostruct-align/1k8uA.t2k-thin90.a2m.gz # 1k8uA.t2k-thin90.a2m with 453 sequences, total weight= 98.1401 avg weight= 0.216645 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3009 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k8uA/info/1k8uA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k8uA/nostruct-align/1k8uA.t2k-thin90.a2m.gz, have 306132 columns in 1279 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ig0A/nostruct-align/1ig0A.t2k-thin90.a2m.gz # 1ig0A.t2k-thin90.a2m with 25 sequences, total weight= 23.9005 avg weight= 0.956018 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ig0A/info/1ig0A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ig0A/nostruct-align/1ig0A.t2k-thin90.a2m.gz, have 306449 columns in 1280 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1ddwA/nostruct-align/1ddwA.t2k-thin90.a2m.gz # 1ddwA.t2k-thin90.a2m with 13 sequences, total weight= 4.79748 avg weight= 0.369037 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1ddwA/info/1ddwA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1ddwA/nostruct-align/1ddwA.t2k-thin90.a2m.gz, have 306560 columns in 1281 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1arb/nostruct-align/1arb.t2k-thin90.a2m.gz # 1arb.t2k-thin90.a2m with 16 sequences, total weight= 16 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20084 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1arb/info/1arb.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1a/1arb/nostruct-align/1arb.t2k-thin90.a2m.gz, have 306823 columns in 1282 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fi2A/nostruct-align/1fi2A.t2k-thin90.a2m.gz # 1fi2A.t2k-thin90.a2m with 190 sequences, total weight= 190 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25143 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fi2A/info/1fi2A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fi2A/nostruct-align/1fi2A.t2k-thin90.a2m.gz, have 307024 columns in 1283 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jyaA/nostruct-align/1jyaA.t2k-thin90.a2m.gz # 1jyaA.t2k-thin90.a2m with 5 sequences, total weight= 4.85158 avg weight= 0.970317 11 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jyaA/info/1jyaA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jyaA/nostruct-align/1jyaA.t2k-thin90.a2m.gz, have 307141 columns in 1284 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dljA/nostruct-align/1dljA.t2k-thin90.a2m.gz # 1dljA.t2k-thin90.a2m with 309 sequences, total weight= 78.4761 avg weight= 0.253968 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30084 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dljA/info/1dljA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dljA/nostruct-align/1dljA.t2k-thin90.a2m.gz, have 307543 columns in 1285 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i19A/nostruct-align/1i19A.t2k-thin90.a2m.gz # 1i19A.t2k-thin90.a2m with 133 sequences, total weight= 133 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02186 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i19A/info/1i19A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i19A/nostruct-align/1i19A.t2k-thin90.a2m.gz, have 308084 columns in 1286 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vmeA/nostruct-align/1vmeA.t2k-thin90.a2m.gz # 1vmeA.t2k-thin90.a2m with 349 sequences, total weight= 349 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17079 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vmeA/info/1vmeA.stride-mixed.CB-burial-14-7 WARNING: skipping b, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1v/1vmeA/nostruct-align/1vmeA.t2k-thin90.a2m.gz, have 308485 columns in 1287 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1go3E/nostruct-align/1go3E.t2k-thin90.a2m.gz # 1go3E.t2k-thin90.a2m with 286 sequences, total weight= 286 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17801 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1go3E/info/1go3E.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1go3E/nostruct-align/1go3E.t2k-thin90.a2m.gz, have 308662 columns in 1288 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fo8A/nostruct-align/1fo8A.t2k-thin90.a2m.gz # 1fo8A.t2k-thin90.a2m with 13 sequences, total weight= 6.9491 avg weight= 0.534546 20 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fo8A/info/1fo8A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fo8A/nostruct-align/1fo8A.t2k-thin90.a2m.gz, have 308992 columns in 1289 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bdo/nostruct-align/1bdo.t2k-thin90.a2m.gz # 1bdo.t2k-thin90.a2m with 277 sequences, total weight= 45.3387 avg weight= 0.163678 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30041 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bdo/info/1bdo.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bdo/nostruct-align/1bdo.t2k-thin90.a2m.gz, have 309072 columns in 1290 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ukkA/nostruct-align/1ukkA.t2k-thin90.a2m.gz # 1ukkA.t2k-thin90.a2m with 173 sequences, total weight= 173 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26652 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ukkA/info/1ukkA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ukkA/nostruct-align/1ukkA.t2k-thin90.a2m.gz, have 309213 columns in 1291 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m15A/nostruct-align/1m15A.t2k-thin90.a2m.gz # 1m15A.t2k-thin90.a2m with 100 sequences, total weight= 19.2793 avg weight= 0.192793 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m15A/info/1m15A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m15A/nostruct-align/1m15A.t2k-thin90.a2m.gz, have 309569 columns in 1292 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bkrA/nostruct-align/1bkrA.t2k-thin90.a2m.gz # 1bkrA.t2k-thin90.a2m with 125 sequences, total weight= 66.163 avg weight= 0.529304 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30029 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bkrA/info/1bkrA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bkrA/nostruct-align/1bkrA.t2k-thin90.a2m.gz, have 309677 columns in 1293 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qlwA/nostruct-align/1qlwA.t2k-thin90.a2m.gz # 1qlwA.t2k-thin90.a2m with 61 sequences, total weight= 61 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11385 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qlwA/info/1qlwA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qlwA/nostruct-align/1qlwA.t2k-thin90.a2m.gz, have 309995 columns in 1294 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t6cA/nostruct-align/1t6cA.t2k-thin90.a2m.gz # 1t6cA.t2k-thin90.a2m with 189 sequences, total weight= 176.574 avg weight= 0.934253 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30036 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t6cA/info/1t6cA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t6cA/nostruct-align/1t6cA.t2k-thin90.a2m.gz, have 310301 columns in 1295 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o7nA/nostruct-align/1o7nA.t2k-thin90.a2m.gz # 1o7nA.t2k-thin90.a2m with 296 sequences, total weight= 296 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.01028 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o7nA/info/1o7nA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o7nA/nostruct-align/1o7nA.t2k-thin90.a2m.gz, have 310748 columns in 1296 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bx7/nostruct-align/1bx7.t2k-thin90.a2m.gz # 1bx7.t2k-thin90.a2m with 6 sequences, total weight= 3.25243 avg weight= 0.542072 19 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bx7/info/1bx7.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bx7/nostruct-align/1bx7.t2k-thin90.a2m.gz, have 310799 columns in 1297 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j5xA/nostruct-align/1j5xA.t2k-thin90.a2m.gz # 1j5xA.t2k-thin90.a2m with 346 sequences, total weight= 346 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24957 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j5xA/info/1j5xA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j5xA/nostruct-align/1j5xA.t2k-thin90.a2m.gz, have 311118 columns in 1298 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1elkA/nostruct-align/1elkA.t2k-thin90.a2m.gz # 1elkA.t2k-thin90.a2m with 53 sequences, total weight= 37.5076 avg weight= 0.707691 38 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1elkA/info/1elkA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1elkA/nostruct-align/1elkA.t2k-thin90.a2m.gz, have 311271 columns in 1299 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1ak0/nostruct-align/1ak0.t2k-thin90.a2m.gz # 1ak0.t2k-thin90.a2m with 41 sequences, total weight= 38.0017 avg weight= 0.926871 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1ak0/info/1ak0.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1a/1ak0/nostruct-align/1ak0.t2k-thin90.a2m.gz, have 311535 columns in 1300 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/25/256bA/nostruct-align/256bA.t2k-thin90.a2m.gz # 256bA.t2k-thin90.a2m with 9 sequences, total weight= 7.39616 avg weight= 0.821795 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/25/256bA/info/256bA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/25/256bA/nostruct-align/256bA.t2k-thin90.a2m.gz, have 311641 columns in 1301 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r8sA/nostruct-align/1r8sA.t2k-thin90.a2m.gz # 1r8sA.t2k-thin90.a2m with 1125 sequences, total weight= 1125 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20283 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r8sA/info/1r8sA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r8sA/nostruct-align/1r8sA.t2k-thin90.a2m.gz, have 311801 columns in 1302 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q2hA/nostruct-align/1q2hA.t2k-thin90.a2m.gz # 1q2hA.t2k-thin90.a2m with 10 sequences, total weight= 5.21909 avg weight= 0.521909 17 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q2hA/info/1q2hA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q2hA/nostruct-align/1q2hA.t2k-thin90.a2m.gz, have 311864 columns in 1303 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1edg/nostruct-align/1edg.t2k-thin90.a2m.gz # 1edg.t2k-thin90.a2m with 130 sequences, total weight= 130 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0252 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1edg/info/1edg.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1edg/nostruct-align/1edg.t2k-thin90.a2m.gz, have 312244 columns in 1304 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rgxA/nostruct-align/1rgxA.t2k-thin90.a2m.gz # 1rgxA.t2k-thin90.a2m with 11 sequences, total weight= 3.09705 avg weight= 0.28155 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rgxA/info/1rgxA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rgxA/nostruct-align/1rgxA.t2k-thin90.a2m.gz, have 312333 columns in 1305 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cnzA/nostruct-align/1cnzA.t2k-thin90.a2m.gz # 1cnzA.t2k-thin90.a2m with 181 sequences, total weight= 28.3591 avg weight= 0.15668 44 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cnzA/info/1cnzA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cnzA/nostruct-align/1cnzA.t2k-thin90.a2m.gz, have 312696 columns in 1306 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k4nA/nostruct-align/1k4nA.t2k-thin90.a2m.gz # 1k4nA.t2k-thin90.a2m with 14 sequences, total weight= 5.51251 avg weight= 0.393751 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k4nA/info/1k4nA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k4nA/nostruct-align/1k4nA.t2k-thin90.a2m.gz, have 312879 columns in 1307 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gxrA/nostruct-align/1gxrA.t2k-thin90.a2m.gz # 1gxrA.t2k-thin90.a2m with 1415 sequences, total weight= 1415 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.839139 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gxrA/info/1gxrA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gxrA/nostruct-align/1gxrA.t2k-thin90.a2m.gz, have 313214 columns in 1308 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qv9A/nostruct-align/1qv9A.t2k-thin90.a2m.gz # 1qv9A.t2k-thin90.a2m with 5 sequences, total weight= 2.99702 avg weight= 0.599405 12 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qv9A/info/1qv9A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qv9A/nostruct-align/1qv9A.t2k-thin90.a2m.gz, have 313496 columns in 1309 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2d/2dpmA/nostruct-align/2dpmA.t2k-thin90.a2m.gz # 2dpmA.t2k-thin90.a2m with 108 sequences, total weight= 108 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26701 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2d/2dpmA/info/2dpmA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/2d/2dpmA/nostruct-align/2dpmA.t2k-thin90.a2m.gz, have 313754 columns in 1310 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o7nB/nostruct-align/1o7nB.t2k-thin90.a2m.gz # 1o7nB.t2k-thin90.a2m with 46 sequences, total weight= 31.633 avg weight= 0.687674 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o7nB/info/1o7nB.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o7nB/nostruct-align/1o7nB.t2k-thin90.a2m.gz, have 313947 columns in 1311 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e42A/nostruct-align/1e42A.t2k-thin90.a2m.gz # 1e42A.t2k-thin90.a2m with 11 sequences, total weight= 5.80161 avg weight= 0.527419 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e42A/info/1e42A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e42A/nostruct-align/1e42A.t2k-thin90.a2m.gz, have 314180 columns in 1312 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t56A/nostruct-align/1t56A.t2k-thin90.a2m.gz # 1t56A.t2k-thin90.a2m with 1539 sequences, total weight= 1539 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.856189 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t56A/info/1t56A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t56A/nostruct-align/1t56A.t2k-thin90.a2m.gz, have 314373 columns in 1313 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rwrA/nostruct-align/1rwrA.t2k-thin90.a2m.gz # 1rwrA.t2k-thin90.a2m with 146 sequences, total weight= 146 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29244 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rwrA/info/1rwrA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rwrA/nostruct-align/1rwrA.t2k-thin90.a2m.gz, have 314670 columns in 1314 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oqjA/nostruct-align/1oqjA.t2k-thin90.a2m.gz # 1oqjA.t2k-thin90.a2m with 19 sequences, total weight= 8.62823 avg weight= 0.454117 23 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oqjA/info/1oqjA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oqjA/nostruct-align/1oqjA.t2k-thin90.a2m.gz, have 314760 columns in 1315 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lmiA/nostruct-align/1lmiA.t2k-thin90.a2m.gz # 1lmiA.t2k-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.621329 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lmiA/info/1lmiA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lmiA/nostruct-align/1lmiA.t2k-thin90.a2m.gz, have 314891 columns in 1316 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fyeA/nostruct-align/1fyeA.t2k-thin90.a2m.gz # 1fyeA.t2k-thin90.a2m with 36 sequences, total weight= 36 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21899 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fyeA/info/1fyeA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fyeA/nostruct-align/1fyeA.t2k-thin90.a2m.gz, have 315111 columns in 1317 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gp0A/nostruct-align/1gp0A.t2k-thin90.a2m.gz # 1gp0A.t2k-thin90.a2m with 178 sequences, total weight= 55.418 avg weight= 0.311337 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30033 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gp0A/info/1gp0A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gp0A/nostruct-align/1gp0A.t2k-thin90.a2m.gz, have 315244 columns in 1318 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b5pA/nostruct-align/1b5pA.t2k-thin90.a2m.gz # 1b5pA.t2k-thin90.a2m with 1971 sequences, total weight= 1971 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.931795 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b5pA/info/1b5pA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1b/1b5pA/nostruct-align/1b5pA.t2k-thin90.a2m.gz, have 315626 columns in 1319 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a73A/nostruct-align/1a73A.t2k-thin90.a2m.gz # 1a73A.t2k-thin90.a2m with 7 sequences, total weight= 6.43428 avg weight= 0.919182 10 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a73A/info/1a73A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1a/1a73A/nostruct-align/1a73A.t2k-thin90.a2m.gz, have 315788 columns in 1320 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1no5A/nostruct-align/1no5A.t2k-thin90.a2m.gz # 1no5A.t2k-thin90.a2m with 102 sequences, total weight= 102 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1562 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1no5A/info/1no5A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1no5A/nostruct-align/1no5A.t2k-thin90.a2m.gz, have 315888 columns in 1321 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hfuA/nostruct-align/1hfuA.t2k-thin90.a2m.gz # 1hfuA.t2k-thin90.a2m with 239 sequences, total weight= 239 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20104 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hfuA/info/1hfuA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hfuA/nostruct-align/1hfuA.t2k-thin90.a2m.gz, have 316388 columns in 1322 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fltX/nostruct-align/1fltX.t2k-thin90.a2m.gz # 1fltX.t2k-thin90.a2m with 32 sequences, total weight= 29.9375 avg weight= 0.935548 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fltX/info/1fltX.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fltX/nostruct-align/1fltX.t2k-thin90.a2m.gz, have 316483 columns in 1323 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1oxxK/nostruct-align/1oxxK.t2k-thin90.a2m.gz # 1oxxK.t2k-thin90.a2m with 10776 sequences, total weight= 10776 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.29273 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1oxxK/info/1oxxK.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1oxxK/nostruct-align/1oxxK.t2k-thin90.a2m.gz, have 316835 columns in 1324 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f9yA/nostruct-align/1f9yA.t2k-thin90.a2m.gz # 1f9yA.t2k-thin90.a2m with 106 sequences, total weight= 24.7746 avg weight= 0.233723 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f9yA/info/1f9yA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f9yA/nostruct-align/1f9yA.t2k-thin90.a2m.gz, have 316993 columns in 1325 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1a6m/nostruct-align/1a6m.t2k-thin90.a2m.gz # 1a6m.t2k-thin90.a2m with 479 sequences, total weight= 98.0817 avg weight= 0.204763 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30423 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1a6m/info/1a6m.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1a/1a6m/nostruct-align/1a6m.t2k-thin90.a2m.gz, have 317144 columns in 1326 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3e/3ezmA/nostruct-align/3ezmA.t2k-thin90.a2m.gz # 3ezmA.t2k-thin90.a2m with 5 sequences, total weight= 5 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20796 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3e/3ezmA/info/3ezmA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/3e/3ezmA/nostruct-align/3ezmA.t2k-thin90.a2m.gz, have 317245 columns in 1327 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fl0A/nostruct-align/1fl0A.t2k-thin90.a2m.gz # 1fl0A.t2k-thin90.a2m with 225 sequences, total weight= 44.2355 avg weight= 0.196602 37 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fl0A/info/1fl0A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fl0A/nostruct-align/1fl0A.t2k-thin90.a2m.gz, have 317409 columns in 1328 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lycA/nostruct-align/1lycA.t2k-thin90.a2m.gz # 1lycA.t2k-thin90.a2m with 211 sequences, total weight= 30.6609 avg weight= 0.145312 41 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lycA/info/1lycA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lycA/nostruct-align/1lycA.t2k-thin90.a2m.gz, have 317745 columns in 1329 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h05A/nostruct-align/1h05A.t2k-thin90.a2m.gz # 1h05A.t2k-thin90.a2m with 102 sequences, total weight= 8.66864 avg weight= 0.0849867 30 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h05A/info/1h05A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h05A/nostruct-align/1h05A.t2k-thin90.a2m.gz, have 317883 columns in 1330 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p9hA/nostruct-align/1p9hA.t2k-thin90.a2m.gz # 1p9hA.t2k-thin90.a2m with 340 sequences, total weight= 101.299 avg weight= 0.297938 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30049 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p9hA/info/1p9hA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p9hA/nostruct-align/1p9hA.t2k-thin90.a2m.gz, have 318062 columns in 1331 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ewfA/nostruct-align/1ewfA.t2k-thin90.a2m.gz # 1ewfA.t2k-thin90.a2m with 51 sequences, total weight= 51 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.13741 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ewfA/info/1ewfA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ewfA/nostruct-align/1ewfA.t2k-thin90.a2m.gz, have 318518 columns in 1332 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r6wA/nostruct-align/1r6wA.t2k-thin90.a2m.gz # 1r6wA.t2k-thin90.a2m with 140 sequences, total weight= 140 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18735 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r6wA/info/1r6wA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r6wA/nostruct-align/1r6wA.t2k-thin90.a2m.gz, have 318839 columns in 1333 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kptA/nostruct-align/1kptA.t2k-thin90.a2m.gz # 1kptA.t2k-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.65574 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kptA/info/1kptA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kptA/nostruct-align/1kptA.t2k-thin90.a2m.gz, have 318944 columns in 1334 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i0lA/nostruct-align/1i0lA.t2k-thin90.a2m.gz # 1i0lA.t2k-thin90.a2m with 215 sequences, total weight= 85.9332 avg weight= 0.399689 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30038 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i0lA/info/1i0lA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i0lA/nostruct-align/1i0lA.t2k-thin90.a2m.gz, have 319136 columns in 1335 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mwqA/nostruct-align/1mwqA.t2k-thin90.a2m.gz # 1mwqA.t2k-thin90.a2m with 71 sequences, total weight= 32.8529 avg weight= 0.462717 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mwqA/info/1mwqA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mwqA/nostruct-align/1mwqA.t2k-thin90.a2m.gz, have 319236 columns in 1336 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nvmB/nostruct-align/1nvmB.t2k-thin90.a2m.gz # 1nvmB.t2k-thin90.a2m with 36 sequences, total weight= 5.06929 avg weight= 0.140814 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nvmB/info/1nvmB.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nvmB/nostruct-align/1nvmB.t2k-thin90.a2m.gz, have 319548 columns in 1337 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nox/nostruct-align/1nox.t2k-thin90.a2m.gz # 1nox.t2k-thin90.a2m with 365 sequences, total weight= 365 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07978 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nox/info/1nox.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nox/nostruct-align/1nox.t2k-thin90.a2m.gz, have 319748 columns in 1338 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1onwA/nostruct-align/1onwA.t2k-thin90.a2m.gz # 1onwA.t2k-thin90.a2m with 467 sequences, total weight= 467 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.950063 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1onwA/info/1onwA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1onwA/nostruct-align/1onwA.t2k-thin90.a2m.gz, have 320124 columns in 1339 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1smxA/nostruct-align/1smxA.t2k-thin90.a2m.gz # 1smxA.t2k-thin90.a2m with 180 sequences, total weight= 26.1955 avg weight= 0.145531 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1smxA/info/1smxA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1smxA/nostruct-align/1smxA.t2k-thin90.a2m.gz, have 320211 columns in 1340 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pqhA/nostruct-align/1pqhA.t2k-thin90.a2m.gz # 1pqhA.t2k-thin90.a2m with 55 sequences, total weight= 6.67143 avg weight= 0.121299 28 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pqhA/info/1pqhA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pqhA/nostruct-align/1pqhA.t2k-thin90.a2m.gz, have 320330 columns in 1341 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jfuA/nostruct-align/1jfuA.t2k-thin90.a2m.gz # 1jfuA.t2k-thin90.a2m with 514 sequences, total weight= 514 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03211 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jfuA/info/1jfuA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jfuA/nostruct-align/1jfuA.t2k-thin90.a2m.gz, have 320506 columns in 1342 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ijqA/nostruct-align/1ijqA.t2k-thin90.a2m.gz # 1ijqA.t2k-thin90.a2m with 234 sequences, total weight= 234 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18568 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ijqA/info/1ijqA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ijqA/nostruct-align/1ijqA.t2k-thin90.a2m.gz, have 320814 columns in 1343 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1snyA/nostruct-align/1snyA.t2k-thin90.a2m.gz # 1snyA.t2k-thin90.a2m with 3965 sequences, total weight= 3965 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.28813 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1snyA/info/1snyA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1snyA/nostruct-align/1snyA.t2k-thin90.a2m.gz, have 321062 columns in 1344 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1fs1B/nostruct-align/1fs1B.t2k-thin90.a2m.gz # 1fs1B.t2k-thin90.a2m with 99 sequences, total weight= 28.3217 avg weight= 0.286077 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1fs1B/info/1fs1B.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1fs1B/nostruct-align/1fs1B.t2k-thin90.a2m.gz, have 321178 columns in 1345 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jl1A/nostruct-align/1jl1A.t2k-thin90.a2m.gz # 1jl1A.t2k-thin90.a2m with 165 sequences, total weight= 98.8683 avg weight= 0.599202 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jl1A/info/1jl1A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jl1A/nostruct-align/1jl1A.t2k-thin90.a2m.gz, have 321330 columns in 1346 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jpzA/nostruct-align/1jpzA.t2k-thin90.a2m.gz # 1jpzA.t2k-thin90.a2m with 1426 sequences, total weight= 1426 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07568 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jpzA/info/1jpzA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jpzA/nostruct-align/1jpzA.t2k-thin90.a2m.gz, have 321786 columns in 1347 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1x/1x6oA/nostruct-align/1x6oA.t2k-thin90.a2m.gz # 1x6oA.t2k-thin90.a2m with 90 sequences, total weight= 31.4364 avg weight= 0.349293 34 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1x/1x6oA/info/1x6oA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1x/1x6oA/nostruct-align/1x6oA.t2k-thin90.a2m.gz, have 321929 columns in 1348 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2t/2tnfA/nostruct-align/2tnfA.t2k-thin90.a2m.gz # 2tnfA.t2k-thin90.a2m with 74 sequences, total weight= 34.4038 avg weight= 0.464916 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2t/2tnfA/info/2tnfA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/2t/2tnfA/nostruct-align/2tnfA.t2k-thin90.a2m.gz, have 322077 columns in 1349 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d4xG/nostruct-align/1d4xG.t2k-thin90.a2m.gz # 1d4xG.t2k-thin90.a2m with 167 sequences, total weight= 167 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21921 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d4xG/info/1d4xG.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d4xG/nostruct-align/1d4xG.t2k-thin90.a2m.gz, have 322201 columns in 1350 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hm9A/nostruct-align/1hm9A.t2k-thin90.a2m.gz # 1hm9A.t2k-thin90.a2m with 691 sequences, total weight= 691 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08302 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hm9A/info/1hm9A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hm9A/nostruct-align/1hm9A.t2k-thin90.a2m.gz, have 322659 columns in 1351 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1orrA/nostruct-align/1orrA.t2k-thin90.a2m.gz # 1orrA.t2k-thin90.a2m with 1470 sequences, total weight= 1470 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03436 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1orrA/info/1orrA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1orrA/nostruct-align/1orrA.t2k-thin90.a2m.gz, have 322997 columns in 1352 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gqnA/nostruct-align/1gqnA.t2k-thin90.a2m.gz # 1gqnA.t2k-thin90.a2m with 58 sequences, total weight= 40.7925 avg weight= 0.703319 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gqnA/info/1gqnA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gqnA/nostruct-align/1gqnA.t2k-thin90.a2m.gz, have 323249 columns in 1353 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rtqA/nostruct-align/1rtqA.t2k-thin90.a2m.gz # 1rtqA.t2k-thin90.a2m with 275 sequences, total weight= 275 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.962988 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rtqA/info/1rtqA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rtqA/nostruct-align/1rtqA.t2k-thin90.a2m.gz, have 323540 columns in 1354 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cy5A/nostruct-align/1cy5A.t2k-thin90.a2m.gz # 1cy5A.t2k-thin90.a2m with 7 sequences, total weight= 5.76599 avg weight= 0.823713 14 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cy5A/info/1cy5A.stride-mixed.CB-burial-14-7 WARNING: skipping b, since it is lower case. # After reading /projects/compbio/experiments/models.97/pdb/1c/1cy5A/nostruct-align/1cy5A.t2k-thin90.a2m.gz, have 323632 columns in 1355 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1a/1azo/nostruct-align/1azo.t2k-thin90.a2m.gz # 1azo.t2k-thin90.a2m with 15 sequences, total weight= 5.82633 avg weight= 0.388422 18 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1a/1azo/info/1azo.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1a/1azo/nostruct-align/1azo.t2k-thin90.a2m.gz, have 323846 columns in 1356 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1m4lA/nostruct-align/1m4lA.t2k-thin90.a2m.gz # 1m4lA.t2k-thin90.a2m with 148 sequences, total weight= 115.941 avg weight= 0.783384 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30043 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1m4lA/info/1m4lA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1m4lA/nostruct-align/1m4lA.t2k-thin90.a2m.gz, have 324153 columns in 1357 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r2mA/nostruct-align/1r2mA.t2k-thin90.a2m.gz # 1r2mA.t2k-thin90.a2m with 19 sequences, total weight= 4.48085 avg weight= 0.235834 21 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r2mA/info/1r2mA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r2mA/nostruct-align/1r2mA.t2k-thin90.a2m.gz, have 324223 columns in 1358 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g6sA/nostruct-align/1g6sA.t2k-thin90.a2m.gz # 1g6sA.t2k-thin90.a2m with 296 sequences, total weight= 74.5392 avg weight= 0.251822 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30117 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g6sA/info/1g6sA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g6sA/nostruct-align/1g6sA.t2k-thin90.a2m.gz, have 324650 columns in 1359 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j79A/nostruct-align/1j79A.t2k-thin90.a2m.gz # 1j79A.t2k-thin90.a2m with 118 sequences, total weight= 57.7262 avg weight= 0.489205 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j79A/info/1j79A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j79A/nostruct-align/1j79A.t2k-thin90.a2m.gz, have 324993 columns in 1360 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gu7A/nostruct-align/1gu7A.t2k-thin90.a2m.gz # 1gu7A.t2k-thin90.a2m with 555 sequences, total weight= 555 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17631 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gu7A/info/1gu7A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gu7A/nostruct-align/1gu7A.t2k-thin90.a2m.gz, have 325357 columns in 1361 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ryaA/nostruct-align/1ryaA.t2k-thin90.a2m.gz # 1ryaA.t2k-thin90.a2m with 586 sequences, total weight= 586 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.08267 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ryaA/info/1ryaA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1ryaA/nostruct-align/1ryaA.t2k-thin90.a2m.gz, have 325517 columns in 1362 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rkqA/nostruct-align/1rkqA.t2k-thin90.a2m.gz # 1rkqA.t2k-thin90.a2m with 605 sequences, total weight= 605 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.964149 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rkqA/info/1rkqA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rkqA/nostruct-align/1rkqA.t2k-thin90.a2m.gz, have 325788 columns in 1363 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e29A/nostruct-align/1e29A.t2k-thin90.a2m.gz # 1e29A.t2k-thin90.a2m with 103 sequences, total weight= 55.159 avg weight= 0.535525 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e29A/info/1e29A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e29A/nostruct-align/1e29A.t2k-thin90.a2m.gz, have 325923 columns in 1364 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k3iA/nostruct-align/1k3iA.t2k-thin90.a2m.gz # 1k3iA.t2k-thin90.a2m with 298 sequences, total weight= 298 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02769 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k3iA/info/1k3iA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k3iA/nostruct-align/1k3iA.t2k-thin90.a2m.gz, have 326574 columns in 1365 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g2nA/nostruct-align/1g2nA.t2k-thin90.a2m.gz # 1g2nA.t2k-thin90.a2m with 295 sequences, total weight= 295 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.968179 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g2nA/info/1g2nA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g2nA/nostruct-align/1g2nA.t2k-thin90.a2m.gz, have 326820 columns in 1366 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qddA/nostruct-align/1qddA.t2k-thin90.a2m.gz # 1qddA.t2k-thin90.a2m with 594 sequences, total weight= 594 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.061 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qddA/info/1qddA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qddA/nostruct-align/1qddA.t2k-thin90.a2m.gz, have 326964 columns in 1367 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jo8A/nostruct-align/1jo8A.t2k-thin90.a2m.gz # 1jo8A.t2k-thin90.a2m with 383 sequences, total weight= 49.8204 avg weight= 0.130079 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30069 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jo8A/info/1jo8A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jo8A/nostruct-align/1jo8A.t2k-thin90.a2m.gz, have 327022 columns in 1368 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2c/2cuaA/nostruct-align/2cuaA.t2k-thin90.a2m.gz # 2cuaA.t2k-thin90.a2m with 552 sequences, total weight= 52.3834 avg weight= 0.0948974 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2c/2cuaA/info/2cuaA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/2c/2cuaA/nostruct-align/2cuaA.t2k-thin90.a2m.gz, have 327144 columns in 1369 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h80A/nostruct-align/1h80A.t2k-thin90.a2m.gz # 1h80A.t2k-thin90.a2m with 92 sequences, total weight= 92 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19248 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h80A/info/1h80A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h80A/nostruct-align/1h80A.t2k-thin90.a2m.gz, have 327577 columns in 1370 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sqsA/nostruct-align/1sqsA.t2k-thin90.a2m.gz # 1sqsA.t2k-thin90.a2m with 132 sequences, total weight= 132 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17458 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sqsA/info/1sqsA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sqsA/nostruct-align/1sqsA.t2k-thin90.a2m.gz, have 327809 columns in 1371 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ix9A/nostruct-align/1ix9A.t2k-thin90.a2m.gz # 1ix9A.t2k-thin90.a2m with 310 sequences, total weight= 22.5652 avg weight= 0.0727909 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ix9A/info/1ix9A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ix9A/nostruct-align/1ix9A.t2k-thin90.a2m.gz, have 328014 columns in 1372 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i4jA/nostruct-align/1i4jA.t2k-thin90.a2m.gz # 1i4jA.t2k-thin90.a2m with 176 sequences, total weight= 25.8785 avg weight= 0.147037 40 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i4jA/info/1i4jA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i4jA/nostruct-align/1i4jA.t2k-thin90.a2m.gz, have 328124 columns in 1373 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ornA/nostruct-align/1ornA.t2k-thin90.a2m.gz # 1ornA.t2k-thin90.a2m with 331 sequences, total weight= 261.091 avg weight= 0.788795 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30087 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ornA/info/1ornA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ornA/nostruct-align/1ornA.t2k-thin90.a2m.gz, have 328338 columns in 1374 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o5kA/nostruct-align/1o5kA.t2k-thin90.a2m.gz # 1o5kA.t2k-thin90.a2m with 315 sequences, total weight= 192.858 avg weight= 0.612247 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.303 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o5kA/info/1o5kA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o5kA/nostruct-align/1o5kA.t2k-thin90.a2m.gz, have 328633 columns in 1375 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e87A/nostruct-align/1e87A.t2k-thin90.a2m.gz # 1e87A.t2k-thin90.a2m with 477 sequences, total weight= 477 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11103 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e87A/info/1e87A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e87A/nostruct-align/1e87A.t2k-thin90.a2m.gz, have 328750 columns in 1376 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kjqA/nostruct-align/1kjqA.t2k-thin90.a2m.gz # 1kjqA.t2k-thin90.a2m with 503 sequences, total weight= 503 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.17077 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kjqA/info/1kjqA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kjqA/nostruct-align/1kjqA.t2k-thin90.a2m.gz, have 329138 columns in 1377 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jsdA/nostruct-align/1jsdA.t2k-thin90.a2m.gz # 1jsdA.t2k-thin90.a2m with 53 sequences, total weight= 8.88536 avg weight= 0.167648 27 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jsdA/info/1jsdA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jsdA/nostruct-align/1jsdA.t2k-thin90.a2m.gz, have 329455 columns in 1378 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tif/nostruct-align/1tif.t2k-thin90.a2m.gz # 1tif.t2k-thin90.a2m with 109 sequences, total weight= 8.41581 avg weight= 0.0772092 31 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tif/info/1tif.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tif/nostruct-align/1tif.t2k-thin90.a2m.gz, have 329531 columns in 1379 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1dqpA/nostruct-align/1dqpA.t2k-thin90.a2m.gz # 1dqpA.t2k-thin90.a2m with 134 sequences, total weight= 37.6027 avg weight= 0.280617 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1dqpA/info/1dqpA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1dqpA/nostruct-align/1dqpA.t2k-thin90.a2m.gz, have 329761 columns in 1380 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qveA/nostruct-align/1qveA.t2k-thin90.a2m.gz # 1qveA.t2k-thin90.a2m with 146 sequences, total weight= 57.5364 avg weight= 0.394085 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qveA/info/1qveA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qveA/nostruct-align/1qveA.t2k-thin90.a2m.gz, have 329887 columns in 1381 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ubkS/nostruct-align/1ubkS.t2k-thin90.a2m.gz # 1ubkS.t2k-thin90.a2m with 143 sequences, total weight= 51.1217 avg weight= 0.357495 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ubkS/info/1ubkS.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ubkS/nostruct-align/1ubkS.t2k-thin90.a2m.gz, have 330154 columns in 1382 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1t2dA/nostruct-align/1t2dA.t2k-thin90.a2m.gz # 1t2dA.t2k-thin90.a2m with 395 sequences, total weight= 83.9985 avg weight= 0.212654 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30166 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1t2dA/info/1t2dA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1t2dA/nostruct-align/1t2dA.t2k-thin90.a2m.gz, have 330469 columns in 1383 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/2a/2a0b/nostruct-align/2a0b.t2k-thin90.a2m.gz # 2a0b.t2k-thin90.a2m with 58 sequences, total weight= 58 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.11921 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/2a/2a0b/info/2a0b.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/2a/2a0b/nostruct-align/2a0b.t2k-thin90.a2m.gz, have 330587 columns in 1384 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1c/1cczA/nostruct-align/1cczA.t2k-thin90.a2m.gz # 1cczA.t2k-thin90.a2m with 87 sequences, total weight= 87 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.0489 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1c/1cczA/info/1cczA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1c/1cczA/nostruct-align/1cczA.t2k-thin90.a2m.gz, have 330758 columns in 1385 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1p0zA/nostruct-align/1p0zA.t2k-thin90.a2m.gz # 1p0zA.t2k-thin90.a2m with 41 sequences, total weight= 22.4928 avg weight= 0.548604 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1p0zA/info/1p0zA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1p0zA/nostruct-align/1p0zA.t2k-thin90.a2m.gz, have 330889 columns in 1386 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1urrA/nostruct-align/1urrA.t2k-thin90.a2m.gz # 1urrA.t2k-thin90.a2m with 145 sequences, total weight= 42.0414 avg weight= 0.289941 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1urrA/info/1urrA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1urrA/nostruct-align/1urrA.t2k-thin90.a2m.gz, have 330986 columns in 1387 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o4yA/nostruct-align/1o4yA.t2k-thin90.a2m.gz # 1o4yA.t2k-thin90.a2m with 52 sequences, total weight= 52 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.21856 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o4yA/info/1o4yA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o4yA/nostruct-align/1o4yA.t2k-thin90.a2m.gz, have 331256 columns in 1388 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1guqA/nostruct-align/1guqA.t2k-thin90.a2m.gz # 1guqA.t2k-thin90.a2m with 84 sequences, total weight= 39.9642 avg weight= 0.475764 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1guqA/info/1guqA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1guqA/nostruct-align/1guqA.t2k-thin90.a2m.gz, have 331603 columns in 1389 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1ju3A/nostruct-align/1ju3A.t2k-thin90.a2m.gz # 1ju3A.t2k-thin90.a2m with 97 sequences, total weight= 97 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.04194 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1ju3A/info/1ju3A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1ju3A/nostruct-align/1ju3A.t2k-thin90.a2m.gz, have 332173 columns in 1390 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k-thin90.a2m.gz # 1b8oA.t2k-thin90.a2m with 130 sequences, total weight= 37.5754 avg weight= 0.289041 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1b8oA/info/1b8oA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k-thin90.a2m.gz, have 332453 columns in 1391 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lzlA/nostruct-align/1lzlA.t2k-thin90.a2m.gz # 1lzlA.t2k-thin90.a2m with 630 sequences, total weight= 630 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02672 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lzlA/info/1lzlA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lzlA/nostruct-align/1lzlA.t2k-thin90.a2m.gz, have 332770 columns in 1392 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vcaA/nostruct-align/1vcaA.t2k-thin90.a2m.gz # 1vcaA.t2k-thin90.a2m with 1073 sequences, total weight= 1073 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.997197 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vcaA/info/1vcaA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vcaA/nostruct-align/1vcaA.t2k-thin90.a2m.gz, have 332969 columns in 1393 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q6oA/nostruct-align/1q6oA.t2k-thin90.a2m.gz # 1q6oA.t2k-thin90.a2m with 81 sequences, total weight= 63.2933 avg weight= 0.781399 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q6oA/info/1q6oA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q6oA/nostruct-align/1q6oA.t2k-thin90.a2m.gz, have 333182 columns in 1394 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1qq9A/nostruct-align/1qq9A.t2k-thin90.a2m.gz # 1qq9A.t2k-thin90.a2m with 211 sequences, total weight= 211 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02171 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1qq9A/info/1qq9A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1qq9A/nostruct-align/1qq9A.t2k-thin90.a2m.gz, have 333459 columns in 1395 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jo0A/nostruct-align/1jo0A.t2k-thin90.a2m.gz # 1jo0A.t2k-thin90.a2m with 91 sequences, total weight= 46.0369 avg weight= 0.5059 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jo0A/info/1jo0A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jo0A/nostruct-align/1jo0A.t2k-thin90.a2m.gz, have 333556 columns in 1396 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sqeA/nostruct-align/1sqeA.t2k-thin90.a2m.gz # 1sqeA.t2k-thin90.a2m with 51 sequences, total weight= 34.8748 avg weight= 0.68382 37 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sqeA/info/1sqeA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sqeA/nostruct-align/1sqeA.t2k-thin90.a2m.gz, have 333657 columns in 1397 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jb3A/nostruct-align/1jb3A.t2k-thin90.a2m.gz # 1jb3A.t2k-thin90.a2m with 2 sequences, total weight= 1.89548 avg weight= 0.947741 6 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jb3A/info/1jb3A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jb3A/nostruct-align/1jb3A.t2k-thin90.a2m.gz, have 333784 columns in 1398 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1uasA/nostruct-align/1uasA.t2k-thin90.a2m.gz # 1uasA.t2k-thin90.a2m with 111 sequences, total weight= 111 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25097 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1uasA/info/1uasA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1uasA/nostruct-align/1uasA.t2k-thin90.a2m.gz, have 334146 columns in 1399 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hyvA/nostruct-align/1hyvA.t2k-thin90.a2m.gz # 1hyvA.t2k-thin90.a2m with 355 sequences, total weight= 355 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25099 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hyvA/info/1hyvA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hyvA/nostruct-align/1hyvA.t2k-thin90.a2m.gz, have 334290 columns in 1400 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vhqA/nostruct-align/1vhqA.t2k-thin90.a2m.gz # 1vhqA.t2k-thin90.a2m with 87 sequences, total weight= 52.0605 avg weight= 0.598396 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vhqA/info/1vhqA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vhqA/nostruct-align/1vhqA.t2k-thin90.a2m.gz, have 334507 columns in 1401 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e43A/nostruct-align/1e43A.t2k-thin90.a2m.gz # 1e43A.t2k-thin90.a2m with 357 sequences, total weight= 357 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07365 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e43A/info/1e43A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e43A/nostruct-align/1e43A.t2k-thin90.a2m.gz, have 334990 columns in 1402 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nkpA/nostruct-align/1nkpA.t2k-thin90.a2m.gz # 1nkpA.t2k-thin90.a2m with 355 sequences, total weight= 185.543 avg weight= 0.522658 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3022 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nkpA/info/1nkpA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nkpA/nostruct-align/1nkpA.t2k-thin90.a2m.gz, have 335078 columns in 1403 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1iw0A/nostruct-align/1iw0A.t2k-thin90.a2m.gz # 1iw0A.t2k-thin90.a2m with 51 sequences, total weight= 23.7458 avg weight= 0.465604 37 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1iw0A/info/1iw0A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1iw0A/nostruct-align/1iw0A.t2k-thin90.a2m.gz, have 335285 columns in 1404 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1o6sB/nostruct-align/1o6sB.t2k-thin90.a2m.gz # 1o6sB.t2k-thin90.a2m with 1038 sequences, total weight= 1038 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18486 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1o6sB/info/1o6sB.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1o6sB/nostruct-align/1o6sB.t2k-thin90.a2m.gz, have 335389 columns in 1405 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g8kA/nostruct-align/1g8kA.t2k-thin90.a2m.gz # 1g8kA.t2k-thin90.a2m with 198 sequences, total weight= 198 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.18721 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g8kA/info/1g8kA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g8kA/nostruct-align/1g8kA.t2k-thin90.a2m.gz, have 336211 columns in 1406 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1t/1tuaA/nostruct-align/1tuaA.t2k-thin90.a2m.gz # 1tuaA.t2k-thin90.a2m with 163 sequences, total weight= 163 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26694 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1t/1tuaA/info/1tuaA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1t/1tuaA/nostruct-align/1tuaA.t2k-thin90.a2m.gz, have 336400 columns in 1407 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r26A/nostruct-align/1r26A.t2k-thin90.a2m.gz # 1r26A.t2k-thin90.a2m with 974 sequences, total weight= 974 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24575 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r26A/info/1r26A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r26A/nostruct-align/1r26A.t2k-thin90.a2m.gz, have 336513 columns in 1408 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mugA/nostruct-align/1mugA.t2k-thin90.a2m.gz # 1mugA.t2k-thin90.a2m with 42 sequences, total weight= 42 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.27357 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mugA/info/1mugA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mugA/nostruct-align/1mugA.t2k-thin90.a2m.gz, have 336678 columns in 1409 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bgf/nostruct-align/1bgf.t2k-thin90.a2m.gz # 1bgf.t2k-thin90.a2m with 24 sequences, total weight= 10.1892 avg weight= 0.424549 25 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bgf/info/1bgf.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bgf/nostruct-align/1bgf.t2k-thin90.a2m.gz, have 336802 columns in 1410 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vioA/nostruct-align/1vioA.t2k-thin90.a2m.gz # 1vioA.t2k-thin90.a2m with 399 sequences, total weight= 113.194 avg weight= 0.283695 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30428 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vioA/info/1vioA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vioA/nostruct-align/1vioA.t2k-thin90.a2m.gz, have 337032 columns in 1411 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nf9A/nostruct-align/1nf9A.t2k-thin90.a2m.gz # 1nf9A.t2k-thin90.a2m with 215 sequences, total weight= 215 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24477 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nf9A/info/1nf9A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nf9A/nostruct-align/1nf9A.t2k-thin90.a2m.gz, have 337239 columns in 1412 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1u/1ugiA/nostruct-align/1ugiA.t2k-thin90.a2m.gz # 1ugiA.t2k-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.584933 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1u/1ugiA/info/1ugiA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1u/1ugiA/nostruct-align/1ugiA.t2k-thin90.a2m.gz, have 337322 columns in 1413 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1eu1A/nostruct-align/1eu1A.t2k-thin90.a2m.gz # 1eu1A.t2k-thin90.a2m with 222 sequences, total weight= 222 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.15077 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1eu1A/info/1eu1A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1eu1A/nostruct-align/1eu1A.t2k-thin90.a2m.gz, have 338089 columns in 1414 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kr7A/nostruct-align/1kr7A.t2k-thin90.a2m.gz # 1kr7A.t2k-thin90.a2m with 95 sequences, total weight= 64.1473 avg weight= 0.675235 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kr7A/info/1kr7A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kr7A/nostruct-align/1kr7A.t2k-thin90.a2m.gz, have 338199 columns in 1415 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hx6A/nostruct-align/1hx6A.t2k-thin90.a2m.gz # 1hx6A.t2k-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.583138 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hx6A/info/1hx6A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hx6A/nostruct-align/1hx6A.t2k-thin90.a2m.gz, have 338569 columns in 1416 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sw5A/nostruct-align/1sw5A.t2k-thin90.a2m.gz # 1sw5A.t2k-thin90.a2m with 124 sequences, total weight= 53.4192 avg weight= 0.4308 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sw5A/info/1sw5A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sw5A/nostruct-align/1sw5A.t2k-thin90.a2m.gz, have 338839 columns in 1417 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mqkL/nostruct-align/1mqkL.t2k-thin90.a2m.gz # 1mqkL.t2k-thin90.a2m with 6402 sequences, total weight= 74.3143 avg weight= 0.011608 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.31391 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mqkL/info/1mqkL.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mqkL/nostruct-align/1mqkL.t2k-thin90.a2m.gz, have 338947 columns in 1418 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1szhA/nostruct-align/1szhA.t2k-thin90.a2m.gz # 1szhA.t2k-thin90.a2m with 4 sequences, total weight= 3.48601 avg weight= 0.871503 11 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1szhA/info/1szhA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1szhA/nostruct-align/1szhA.t2k-thin90.a2m.gz, have 339094 columns in 1419 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i60A/nostruct-align/1i60A.t2k-thin90.a2m.gz # 1i60A.t2k-thin90.a2m with 228 sequences, total weight= 228 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.965386 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i60A/info/1i60A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i60A/nostruct-align/1i60A.t2k-thin90.a2m.gz, have 339372 columns in 1420 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1i12A/nostruct-align/1i12A.t2k-thin90.a2m.gz # 1i12A.t2k-thin90.a2m with 378 sequences, total weight= 378 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.898215 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1i12A/info/1i12A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1i12A/nostruct-align/1i12A.t2k-thin90.a2m.gz, have 339526 columns in 1421 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kkoA/nostruct-align/1kkoA.t2k-thin90.a2m.gz # 1kkoA.t2k-thin90.a2m with 69 sequences, total weight= 49.1127 avg weight= 0.711778 37 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kkoA/info/1kkoA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kkoA/nostruct-align/1kkoA.t2k-thin90.a2m.gz, have 339937 columns in 1422 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lqaA/nostruct-align/1lqaA.t2k-thin90.a2m.gz # 1lqaA.t2k-thin90.a2m with 830 sequences, total weight= 830 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25428 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lqaA/info/1lqaA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lqaA/nostruct-align/1lqaA.t2k-thin90.a2m.gz, have 340283 columns in 1423 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1p/1pcfA/nostruct-align/1pcfA.t2k-thin90.a2m.gz # 1pcfA.t2k-thin90.a2m with 19 sequences, total weight= 8.83828 avg weight= 0.465173 22 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1p/1pcfA/info/1pcfA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1p/1pcfA/nostruct-align/1pcfA.t2k-thin90.a2m.gz, have 340349 columns in 1424 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r4pA/nostruct-align/1r4pA.t2k-thin90.a2m.gz # 1r4pA.t2k-thin90.a2m with 87 sequences, total weight= 69.7327 avg weight= 0.801525 45 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r4pA/info/1r4pA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r4pA/nostruct-align/1r4pA.t2k-thin90.a2m.gz, have 340630 columns in 1425 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sqgA/nostruct-align/1sqgA.t2k-thin90.a2m.gz # 1sqgA.t2k-thin90.a2m with 540 sequences, total weight= 540 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.1268 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sqgA/info/1sqgA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sqgA/nostruct-align/1sqgA.t2k-thin90.a2m.gz, have 341054 columns in 1426 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1h4xA/nostruct-align/1h4xA.t2k-thin90.a2m.gz # 1h4xA.t2k-thin90.a2m with 170 sequences, total weight= 170 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.26298 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1h4xA/info/1h4xA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1h4xA/nostruct-align/1h4xA.t2k-thin90.a2m.gz, have 341165 columns in 1427 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/3e/3eipA/nostruct-align/3eipA.t2k-thin90.a2m.gz # 3eipA.t2k-thin90.a2m with 6 sequences, total weight= 2.6921 avg weight= 0.448684 11 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/3e/3eipA/info/3eipA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/3e/3eipA/nostruct-align/3eipA.t2k-thin90.a2m.gz, have 341249 columns in 1428 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1k94A/nostruct-align/1k94A.t2k-thin90.a2m.gz # 1k94A.t2k-thin90.a2m with 405 sequences, total weight= 377.516 avg weight= 0.932139 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.3007 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1k94A/info/1k94A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1k94A/nostruct-align/1k94A.t2k-thin90.a2m.gz, have 341414 columns in 1429 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1r62A/nostruct-align/1r62A.t2k-thin90.a2m.gz # 1r62A.t2k-thin90.a2m with 4006 sequences, total weight= 4006 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24069 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1r62A/info/1r62A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1r62A/nostruct-align/1r62A.t2k-thin90.a2m.gz, have 341550 columns in 1430 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1i/1ihjA/nostruct-align/1ihjA.t2k-thin90.a2m.gz # 1ihjA.t2k-thin90.a2m with 353 sequences, total weight= 176.699 avg weight= 0.500563 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30179 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1i/1ihjA/info/1ihjA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1i/1ihjA/nostruct-align/1ihjA.t2k-thin90.a2m.gz, have 341644 columns in 1431 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1n/1nofA/nostruct-align/1nofA.t2k-thin90.a2m.gz # 1nofA.t2k-thin90.a2m with 49 sequences, total weight= 49 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25643 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1n/1nofA/info/1nofA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1n/1nofA/nostruct-align/1nofA.t2k-thin90.a2m.gz, have 342027 columns in 1432 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1g3p/nostruct-align/1g3p.t2k-thin90.a2m.gz # 1g3p.t2k-thin90.a2m with 3 sequences, total weight= 3 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.16516 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1g3p/info/1g3p.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1g3p/nostruct-align/1g3p.t2k-thin90.a2m.gz, have 342219 columns in 1433 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1vdwA/nostruct-align/1vdwA.t2k-thin90.a2m.gz # 1vdwA.t2k-thin90.a2m with 1307 sequences, total weight= 1307 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24901 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1vdwA/info/1vdwA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1vdwA/nostruct-align/1vdwA.t2k-thin90.a2m.gz, have 342467 columns in 1434 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1q/1q1fA/nostruct-align/1q1fA.t2k-thin90.a2m.gz # 1q1fA.t2k-thin90.a2m with 603 sequences, total weight= 603 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.24988 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1q/1q1fA/info/1q1fA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1q/1q1fA/nostruct-align/1q1fA.t2k-thin90.a2m.gz, have 342615 columns in 1435 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jakA/nostruct-align/1jakA.t2k-thin90.a2m.gz # 1jakA.t2k-thin90.a2m with 125 sequences, total weight= 125 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.20989 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jakA/info/1jakA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jakA/nostruct-align/1jakA.t2k-thin90.a2m.gz, have 343114 columns in 1436 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1ju2A/nostruct-align/1ju2A.t2k-thin90.a2m.gz # 1ju2A.t2k-thin90.a2m with 294 sequences, total weight= 294 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.03754 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1ju2A/info/1ju2A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1ju2A/nostruct-align/1ju2A.t2k-thin90.a2m.gz, have 343635 columns in 1437 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1orc/nostruct-align/1orc.t2k-thin90.a2m.gz # 1orc.t2k-thin90.a2m with 4 sequences, total weight= 3.31057 avg weight= 0.827642 10 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1orc/info/1orc.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1orc/nostruct-align/1orc.t2k-thin90.a2m.gz, have 343699 columns in 1438 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1m/1mhnA/nostruct-align/1mhnA.t2k-thin90.a2m.gz # 1mhnA.t2k-thin90.a2m with 58 sequences, total weight= 31.7503 avg weight= 0.547418 37 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1m/1mhnA/info/1mhnA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1m/1mhnA/nostruct-align/1mhnA.t2k-thin90.a2m.gz, have 343758 columns in 1439 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d2sA/nostruct-align/1d2sA.t2k-thin90.a2m.gz # 1d2sA.t2k-thin90.a2m with 189 sequences, total weight= 189 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.991545 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d2sA/info/1d2sA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d2sA/nostruct-align/1d2sA.t2k-thin90.a2m.gz, have 343928 columns in 1440 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1v/1v7zA/nostruct-align/1v7zA.t2k-thin90.a2m.gz # 1v7zA.t2k-thin90.a2m with 58 sequences, total weight= 56.6217 avg weight= 0.976237 33 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1v/1v7zA/info/1v7zA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1v/1v7zA/nostruct-align/1v7zA.t2k-thin90.a2m.gz, have 344185 columns in 1441 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1o/1ok0A/nostruct-align/1ok0A.t2k-thin90.a2m.gz # 1ok0A.t2k-thin90.a2m with 8 sequences, total weight= 4.20491 avg weight= 0.525614 16 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1o/1ok0A/info/1ok0A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1o/1ok0A/nostruct-align/1ok0A.t2k-thin90.a2m.gz, have 344259 columns in 1442 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1jixA/nostruct-align/1jixA.t2k-thin90.a2m.gz # 1jixA.t2k-thin90.a2m with 1 sequences, total weight= 1 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.577944 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1jixA/info/1jixA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1jixA/nostruct-align/1jixA.t2k-thin90.a2m.gz, have 344610 columns in 1443 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1e4cP/nostruct-align/1e4cP.t2k-thin90.a2m.gz # 1e4cP.t2k-thin90.a2m with 202 sequences, total weight= 186.632 avg weight= 0.923919 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30031 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1e4cP/info/1e4cP.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1e4cP/nostruct-align/1e4cP.t2k-thin90.a2m.gz, have 344816 columns in 1444 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1e/1ezwA/nostruct-align/1ezwA.t2k-thin90.a2m.gz # 1ezwA.t2k-thin90.a2m with 320 sequences, total weight= 320 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.07756 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1e/1ezwA/info/1ezwA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1e/1ezwA/nostruct-align/1ezwA.t2k-thin90.a2m.gz, have 345163 columns in 1445 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f94A/nostruct-align/1f94A.t2k-thin90.a2m.gz # 1f94A.t2k-thin90.a2m with 143 sequences, total weight= 20.4403 avg weight= 0.142939 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f94A/info/1f94A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f94A/nostruct-align/1f94A.t2k-thin90.a2m.gz, have 345226 columns in 1446 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kr4A/nostruct-align/1kr4A.t2k-thin90.a2m.gz # 1kr4A.t2k-thin90.a2m with 70 sequences, total weight= 18.3437 avg weight= 0.262052 39 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kr4A/info/1kr4A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kr4A/nostruct-align/1kr4A.t2k-thin90.a2m.gz, have 345336 columns in 1447 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1ryoA/nostruct-align/1ryoA.t2k-thin90.a2m.gz # 1ryoA.t2k-thin90.a2m with 164 sequences, total weight= 78.9855 avg weight= 0.481619 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.30037 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1ryoA/info/1ryoA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1ryoA/nostruct-align/1ryoA.t2k-thin90.a2m.gz, have 345660 columns in 1448 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1k/1kxoA/nostruct-align/1kxoA.t2k-thin90.a2m.gz # 1kxoA.t2k-thin90.a2m with 57 sequences, total weight= 57 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.19253 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1k/1kxoA/info/1kxoA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1k/1kxoA/nostruct-align/1kxoA.t2k-thin90.a2m.gz, have 345825 columns in 1449 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1b/1bu8A/nostruct-align/1bu8A.t2k-thin90.a2m.gz # 1bu8A.t2k-thin90.a2m with 146 sequences, total weight= 104.558 avg weight= 0.716148 46 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1b/1bu8A/info/1bu8A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1b/1bu8A/nostruct-align/1bu8A.t2k-thin90.a2m.gz, have 346271 columns in 1450 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1l/1lvmA/nostruct-align/1lvmA.t2k-thin90.a2m.gz # 1lvmA.t2k-thin90.a2m with 51 sequences, total weight= 16.1522 avg weight= 0.31671 32 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1l/1lvmA/info/1lvmA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1l/1lvmA/nostruct-align/1lvmA.t2k-thin90.a2m.gz, have 346500 columns in 1451 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1g/1gwyA/nostruct-align/1gwyA.t2k-thin90.a2m.gz # 1gwyA.t2k-thin90.a2m with 7 sequences, total weight= 2.85776 avg weight= 0.408252 11 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1g/1gwyA/info/1gwyA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1g/1gwyA/nostruct-align/1gwyA.t2k-thin90.a2m.gz, have 346675 columns in 1452 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1j/1j24A/nostruct-align/1j24A.t2k-thin90.a2m.gz # 1j24A.t2k-thin90.a2m with 46 sequences, total weight= 32.85 avg weight= 0.714131 41 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1j/1j24A/info/1j24A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1j/1j24A/nostruct-align/1j24A.t2k-thin90.a2m.gz, have 346808 columns in 1453 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1s/1sfxA/nostruct-align/1sfxA.t2k-thin90.a2m.gz # 1sfxA.t2k-thin90.a2m with 207 sequences, total weight= 207 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.09075 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1s/1sfxA/info/1sfxA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1s/1sfxA/nostruct-align/1sfxA.t2k-thin90.a2m.gz, have 346917 columns in 1454 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1r/1rhcA/nostruct-align/1rhcA.t2k-thin90.a2m.gz # 1rhcA.t2k-thin90.a2m with 857 sequences, total weight= 857 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.02501 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1r/1rhcA/info/1rhcA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1r/1rhcA/nostruct-align/1rhcA.t2k-thin90.a2m.gz, have 347247 columns in 1455 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1h/1hxhA/nostruct-align/1hxhA.t2k-thin90.a2m.gz # 1hxhA.t2k-thin90.a2m with 2988 sequences, total weight= 2988 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 1.25913 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1h/1hxhA/info/1hxhA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1h/1hxhA/nostruct-align/1hxhA.t2k-thin90.a2m.gz, have 347500 columns in 1456 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1f/1f32A/nostruct-align/1f32A.t2k-thin90.a2m.gz # 1f32A.t2k-thin90.a2m with 8 sequences, total weight= 6.84308 avg weight= 0.855385 14 iterations # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1f/1f32A/info/1f32A.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1f/1f32A/nostruct-align/1f32A.t2k-thin90.a2m.gz, have 347627 columns in 1457 chains # Reading Input A2M format from /projects/compbio/experiments/models.97/pdb/1d/1d5tA/nostruct-align/1d5tA.t2k-thin90.a2m.gz # 1d5tA.t2k-thin90.a2m with 179 sequences, total weight= 179 avg weight= 1 clipped 46 iterations # AdjustWeights couldn't save exactly 1.3 bits/position, saving 0.938387 bits. # Reading sequence for layer 4 from /projects/compbio/experiments/models.97/pdb/1d/1d5tA/info/1d5tA.stride-mixed.CB-burial-14-7 # After reading /projects/compbio/experiments/models.97/pdb/1d/1d5tA/nostruct-align/1d5tA.t2k-thin90.a2m.gz, have 348060 columns in 1458 chains # command:CPU_time= 1823 sec, elapsed time= 1856.76 sec) # command:# ReportNetQualityForTestTo quality-reports/dunbrack-30pc-1763-t2k-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-CB-burial-14-7-from-empty-for-casp.test ok. # command:# Testing net dunbrack-30pc-1763-t2k-thin90-IDGaaH13-3-13-7-13-9-13-11-t2c3-CB-burial-14-7-from-empty.net # Initializing Gain for CB-burial-14-7 # Initializing Gain for third_layer # Initializing Gain for second_layer # Initializing Gain for FirstLayer # Network initialization done # command:CPU_time= 1929.42 sec, elapsed time= 2076.81 sec) # command: