Best Alignments for T0643

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2ictA	2.5229e+00	2ictA/T0643-2ictA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.35.1.3
1lmb3	3.0713e+00	1lmb3/T0643-1lmb3-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3f6wA	3.1133e+00	3f6wA/T0643-3f6wA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2croA	3.5740e+00	2croA/T0643-2croA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.35.1.2
1hlvA	4.8834e+00	1hlvA/T0643-1hlvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.1.7 a.4.1.7
1lliA	5.5521e+00	1lliA/T0643-1lliA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.35.1.2
1r69	5.8875e+00	1r69/T0643-1r69-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3fyaA	7.0560e+00	3fyaA/T0643-3fyaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3g5gA	8.4695e+00	3g5gA/T0643-3g5gA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ef8A	8.8634e+00	2ef8A/T0643-2ef8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2b5aA	8.8712e+00	2b5aA/T0643-2b5aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.35.1.3
3cecA	9.0223e+00	3cecA/T0643-3cecA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1r69A	9.1253e+00	1r69A/T0643-1r69A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.35.1.2
3kz3A	9.2884e+00	3kz3A/T0643-3kz3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3ivpA	9.5368e+00	3ivpA/T0643-3ivpA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3eusA	9.5617e+00	3eusA/T0643-3eusA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1utxA	9.7623e+00	1utxA/T0643-1utxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.35.1.3
2ebyA	9.7822e+00	2ebyA/T0643-2ebyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3b7hA	1.0316e+01	3b7hA/T0643-3b7hA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1b0nA	1.2605e+01	1b0nA/T0643-1b0nA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.34.1.1 a.35.1.3

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001