# List of top-scoring protein chains for t2k-w0.5-1-near-backbone-11-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2croA	71	2.828	a.35.1.2	17038
3f6wA	83	3.590		
1hlvA	131	4.476	a.4.1.7,a.4.1.7	65854,65855
2ictA	94	5.152	a.35.1.3	147605
1orc	71	6.344		
5croA	66	6.653	a.35.1.2	17044
1neqA	74	7.056	a.35.1.2	17063
2jvlA	107	9.112		
1r69	69	9.130		
3ivpA	126	10.28		
1ic8A	194	10.52	a.4.1.1,a.35.1.1	76740,76741
3fyaA	99	10.52		
3g5gA	99	11.69		
1r69A	69	15.51	a.35.1.2	17028
1orcA	71	16.07	a.35.1.2	17054
2b5aA	77	17.08	a.35.1.3	127882
2bnmA	198	18.12	a.35.1.3,b.82.1.10	128835,128836
2cro	71	19.08		
1lliA	92	19.14	a.35.1.2	17025
2cw1A	65	20.70	k.46.1.1	130918
1b0nA	111	21.40	a.34.1.1,a.35.1.3	17001,17064
1utxA	66	21.86	a.35.1.3	108034
3bs3A	76	22.21		
1lmb3	92	22.36		
2ef8A	84	24.26		
2ebyA	113	25.18		
1y7yA	74	29.92	a.35.1.3	122729
3b7hA	78	32.38		
2a4hA	126	36.38	c.47.1.23	126155
1y9qA	192	38.18	a.35.1.8,b.82.1.15	116592,116593
3kz3A	80	46.13		
3cecA	104	46.41		
2ovgA	66	47.02		
3eusA	86	50.28		
3ci7A	58	50.36		
2hftA	218	53.77	b.1.2.1,b.1.2.1	21951,21952
3mv2A	325	57.81		
3f52A	117	65.34		
1azoA	232	67.42	c.52.1.14	33329
1rhwA	89	69.05	d.39.1.1	97490
2r1jL	68	71.92	a.35.1.2	151525
2zjxA	58	72.87		
2ct7A	86	79.88	g.44.1.4	130791
2anxA	146	79.98		
1xjuA	163	80.84	d.2.1.3	115394
2elhA	87	82.29		
3i71A	68	82.69		
3fr7A	525	84.40