Best Alignments for T0643

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2ictA	2.6805e+00	2ictA/T0643-2ictA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.35.1.3
3b7hA	3.3959e+00	3b7hA/T0643-3b7hA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3cecA	3.5797e+00	3cecA/T0643-3cecA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1r69	4.4957e+00	1r69/T0643-1r69-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2cro	6.4489e+00	2cro/T0643-2cro-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2jvlA	6.5143e+00	2jvlA/T0643-2jvlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3eusA	6.8319e+00	3eusA/T0643-3eusA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2bnmA	6.9481e+00	2bnmA/T0643-2bnmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.35.1.3 b.82.1.10
1y9qA	8.2673e+00	1y9qA/T0643-1y9qA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.35.1.8 b.82.1.15
1b0nA	8.9792e+00	1b0nA/T0643-1b0nA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.34.1.1 a.35.1.3
2r1jL	9.5885e+00	2r1jL/T0643-2r1jL-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.35.1.2
1rioA	9.9621e+00	1rioA/T0643-1rioA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.35.1.2
2croA	1.0146e+01	2croA/T0643-2croA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.35.1.2
1y7yA	1.1936e+01	1y7yA/T0643-1y7yA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.35.1.3
2ebyA	1.2267e+01	2ebyA/T0643-2ebyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1utxA	1.3921e+01	1utxA/T0643-1utxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.35.1.3
1adrA	1.5468e+01	1adrA/T0643-1adrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.35.1.2
1lliA	1.7233e+01	1lliA/T0643-1lliA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.35.1.2
2cw1A	1.9396e+01	2cw1A/T0643-2cw1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	k.46.1.1
2b5aA	2.0907e+01	2b5aA/T0643-2b5aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.35.1.3

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001