# List of top-scoring protein chains for t2k-w0.5-1-near-backbone-11-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
3g7gA	158	1.858		
1dnv	437	8.067		
1dj8A	89	16.14	a.57.1.1	17919
2k47A	79	16.53		
2w82A	165	23.30		
1moqA	368	28.84	c.80.1.1	35302
3f0nA	414	30.59		
2w51A	158	34.41		
2k2vA	126	36.47		
2eknA	159	36.98		
2fcwA	109	40.65	a.13.1.1	133288
3n22A	98	41.62		
1r5sA	132	43.16	f.50.1.1	111709
3lloA	143	43.84		
2b4gA	317	47.85	c.1.4.1	127829
3cztX	92	48.60		
1rtwA	220	49.59	a.132.1.3	97823
1x93A	55	50.96	a.43.1.3	145859
2pr1A	163	52.03		
2axcA	264	52.15		
3c8zA	414	53.52		
2h21A	440	61.65	a.166.1.1,b.85.7.3	135976,135977
3h2yA	368	68.97		
2r4vA	247	69.37		
3f7sA	142	69.48		
1jhdA	396	69.51	b.122.1.3,c.26.1.5	66712,66713
1u1sA	82	74.27	b.38.1.2	119451
2qmoA	220	74.28		
1c4oA	664	75.09	c.37.1.19,c.37.1.19	32415,32416
3fbkA	153	80.06		
3ckaA	320	83.74		
2r37A	207	85.42