# List of top-scoring protein chains for t2k-w0.5-1-bys-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1h7wA	1025	8.945	a.1.2.2,c.1.4.1,c.3.1.1,c.4.1.1,d.58.1.5	15683,28628,30324,30609,39007
3g7gA	158	13.53		
1gteA	1025	19.50	a.1.2.2,c.1.4.1,c.3.1.1,c.4.1.1,d.58.1.5	70440,70441,70442,70443,70444
2r4vA	247	24.20		
2b4gA	317	24.63	c.1.4.1	127829
2eknA	159	27.18		
2koeA	40	28.00		
1vhvA	268	32.73	c.90.1.1	100704
2w82A	165	45.59		
3d72A	149	52.14		
3n22A	98	52.75		
3gl5A	239	59.23		
1gxsB	158	59.71		
1moqA	368	62.35	c.80.1.1	35302
1mtzA	293	65.96	c.69.1.7	79467
1dnv	437	69.52		
1rtwA	220	72.39	a.132.1.3	97823
1o63A	219	72.40	c.94.1.1	92540
3keaA	285	73.93		
2vnfA	60	74.85	g.50.1.2	153333
3dm8A	143	74.95	d.17.4.20	157804
2i3dA	249	77.24	c.69.1.36	147499
2esnA	310	78.85	a.4.5.37,c.94.1.1	132333,132334
3il6A	321	80.72		
2evvA	207	81.97		
2f6kA	307	85.09	c.1.9.15	133047
2e6fA	314	87.32		
2djlA	314	89.36