Best Alignments for T0642

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2eknA	1.3265e+01	2eknA/T0642-2eknA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ohdA	1.9511e+01	2ohdA/T0642-2ohdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2i61A	2.6172e+01	2i61A/T0642-2i61A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pdrA	3.0739e+01	2pdrA/T0642-2pdrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3d72A	3.1339e+01	3d72A/T0642-3d72A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ekrA	3.4482e+01	1ekrA/T0642-1ekrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.58.21.1
2iihA	3.9234e+01	2iihA/T0642-2iihA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2koeA	4.3809e+01	2koeA/T0642-2koeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3fvcA	4.7168e+01	3fvcA/T0642-3fvcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2p0pA	4.7978e+01	2p0pA/T0642-2p0pA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1zkkA	4.8449e+01	1zkkA/T0642-1zkkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1xk4C	5.4734e+01	1xk4C/T0642-1xk4C-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.39.1.2
2eeyA	5.7503e+01	2eeyA/T0642-2eeyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2w51A	6.2507e+01	2w51A/T0642-2w51A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1rdsA	6.5529e+01	1rdsA/T0642-1rdsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.1.1.4
3f9xA	6.8802e+01	3f9xA/T0642-3f9xA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ml9A	6.9217e+01	1ml9A/T0642-1ml9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2w5yA	6.9722e+01	2w5yA/T0642-2w5yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ebbA	7.1204e+01	2ebbA/T0642-2ebbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3h6lA	7.3309e+01	3h6lA/T0642-3h6lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001