Best Alignments for T0642

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2r5jA/T0642-2r5jA-simplesw-adpstyle1.a2m 2r5jA/T0642-2r5jA-simplesw-adpstyle1.al 1.3324e+013.27e+00
1e3dB/T0642-1e3dB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1e3dB/T0642-1e3dB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7248e+011.21e-03 1h2rL e.18.1.1
2i53A/T0642-2i53A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2i53A/T0642-2i53A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8387e+011.04e-07 a.74.1.1
a.74.1.1
2fmyA/T0642-2fmyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fmyA/T0642-2fmyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2233e+014.25e-09
2fxqA/T0642-2fxqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fxqA/T0642-2fxqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4032e+016.99e-05
1dzlA/T0642-1dzlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dzlA/T0642-1dzlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4088e+014.95e-05 1dzlA b.121.6.1
2koeA/T0642-2koeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2koeA/T0642-2koeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5382e+011.09e+03
1x7aL/T0642-1x7aL-t04-global-adpstyle1.a2m 1x7aL/T0642-1x7aL-t04-global-adpstyle1.al 2.5801e+019.49e+00 g.3.11.1
g.3.11.1
1jlvA/T0642-1jlvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jlvA/T0642-1jlvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8137e+012.39e-03 a.45.1.1
c.47.1.5
3lqaG/T0642-3lqaG-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3lqaG/T0642-3lqaG-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9688e+017.00e+01

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001