Best Alignments for T0642

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2i53A/T0642-2i53A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2i53A/T0642-2i53A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1880e+011.04e-07 a.74.1.1
a.74.1.1
1e3dB/T0642-1e3dB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1e3dB/T0642-1e3dB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3989e+011.23e-03 1h2rL e.18.1.1
2koeA/T0642-2koeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2koeA/T0642-2koeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4075e+014.58e+03
1oltA/T0642-1oltA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1oltA/T0642-1oltA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4696e+018.94e+03 c.1.28.2
3lqaG/T0642-3lqaG-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3lqaG/T0642-3lqaG-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6054e+011.28e+02
2fmyA/T0642-2fmyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fmyA/T0642-2fmyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7045e+012.12e-06
1jlvA/T0642-1jlvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jlvA/T0642-1jlvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8731e+011.03e-01 a.45.1.1
c.47.1.5
1qvtA/T0642-1qvtA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qvtA/T0642-1qvtA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9877e+014.17e-05 a.4.1.9
a.121.1.1
2nqoA/T0642-2nqoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2nqoA/T0642-2nqoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2278e+011.83e-03 d.153.1.6
1dzlA/T0642-1dzlA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dzlA/T0642-1dzlA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.4048e+017.35e+00 1dzlA b.121.6.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001