Best Alignments for T0640

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2pnfA/T0640-2pnfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2pnfA/T0640-2pnfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.9274e-316.63e-158
2zatA/T0640-2zatA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2zatA/T0640-2zatA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6999e-302.56e-146
2jahA/T0640-2jahA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2jahA/T0640-2jahA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0033e-297.29e-148
1q7bA/T0640-1q7bA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1q7bA/T0640-1q7bA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1481e-294.72e-157 c.2.1.2
2hq1A/T0640-2hq1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2hq1A/T0640-2hq1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5799e-298.65e-141
2ph3A/T0640-2ph3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ph3A/T0640-2ph3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.6422e-291.84e-147
2cfcA/T0640-2cfcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cfcA/T0640-2cfcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.8028e-296.92e-151
3lylA/T0640-3lylA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3lylA/T0640-3lylA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1352e-283.15e-153
3imfA/T0640-3imfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3imfA/T0640-3imfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5894e-283.59e-142
2pd6A/T0640-2pd6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2pd6A/T0640-2pd6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.9325e-281.57e-141

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001