Best Alignments for T0640

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1edoA/T0640-1edoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1edoA/T0640-1edoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2900e-383.09e-150 1ybvA c.2.1.2
3lylA/T0640-3lylA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3lylA/T0640-3lylA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.1390e-329.81e-152
2pnfA/T0640-2pnfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2pnfA/T0640-2pnfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.3945e-328.50e-152
2ph3A/T0640-2ph3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ph3A/T0640-2ph3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6912e-311.80e-149
2hq1A/T0640-2hq1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2hq1A/T0640-2hq1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7339e-313.88e-141
3ezlA/T0640-3ezlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3ezlA/T0640-3ezlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5481e-295.73e-141
2pd6A/T0640-2pd6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2pd6A/T0640-2pd6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.0537e-291.09e-137
2nm0A/T0640-2nm0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2nm0A/T0640-2nm0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6959e-283.64e-127
2zatA/T0640-2zatA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2zatA/T0640-2zatA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7148e-272.39e-130
3a28A/T0640-3a28A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3a28A/T0640-3a28A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9623e-279.39e-132

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001