PFRMAT TS TARGET T0639 AUTHOR SAM-T08-server METHOD This prediction was created by the SAM-T08 server, which uses target METHOD and template HMMs to search a large template library and to align the METHOD target to the templates. Undertaker is then used to choose the most METHOD protein-like models from among the alignments, and to do further METHOD optimization to attempt to remove breaks and clashes. METHOD REMARK 6 REMARK 6 T0639 model 5 Sat Jul 17 00:33:12 2010 MODEL 5 PARENT N/A ATOM 2 N ASN 55 -17.037 -12.603 -8.400 1.00 0.00 ATOM 3 CA ASN 55 -16.509 -13.295 -7.240 1.00 0.00 ATOM 4 CB ASN 55 -16.389 -14.794 -7.519 1.00 0.00 ATOM 5 CG ASN 55 -17.736 -15.491 -7.547 1.00 0.00 ATOM 6 ND2 ASN 55 -17.773 -16.680 -8.140 1.00 0.00 ATOM 7 OD1 ASN 55 -18.727 -14.966 -7.041 1.00 0.00 ATOM 8 O ASN 55 -14.922 -12.383 -5.705 1.00 0.00 ATOM 9 C ASN 55 -15.172 -12.681 -6.869 1.00 0.00 ATOM 10 N GLU 56 -14.314 -12.496 -7.867 1.00 0.00 ATOM 11 CA GLU 56 -13.004 -11.924 -7.637 1.00 0.00 ATOM 12 CB GLU 56 -12.218 -11.839 -8.947 1.00 0.00 ATOM 13 CG GLU 56 -11.780 -13.185 -9.497 1.00 0.00 ATOM 14 CD GLU 56 -11.073 -13.067 -10.833 1.00 0.00 ATOM 15 OE1 GLU 56 -11.092 -11.964 -11.420 1.00 0.00 ATOM 16 OE2 GLU 56 -10.500 -14.077 -11.293 1.00 0.00 ATOM 17 O GLU 56 -12.307 -10.237 -6.088 1.00 0.00 ATOM 18 C GLU 56 -13.067 -10.550 -7.004 1.00 0.00 ATOM 19 N PHE 57 -13.983 -9.730 -7.492 1.00 0.00 ATOM 20 CA PHE 57 -14.154 -8.395 -6.968 1.00 0.00 ATOM 21 CB PHE 57 -15.181 -7.620 -7.797 1.00 0.00 ATOM 22 CG PHE 57 -14.666 -7.173 -9.136 1.00 0.00 ATOM 23 CD1 PHE 57 -15.177 -7.707 -10.305 1.00 0.00 ATOM 24 CD2 PHE 57 -13.669 -6.217 -9.224 1.00 0.00 ATOM 25 CE1 PHE 57 -14.702 -7.295 -11.536 1.00 0.00 ATOM 26 CE2 PHE 57 -13.195 -5.803 -10.455 1.00 0.00 ATOM 27 CZ PHE 57 -13.706 -6.339 -11.608 1.00 0.00 ATOM 28 O PHE 57 -14.097 -7.702 -4.677 1.00 0.00 ATOM 29 C PHE 57 -14.581 -8.472 -5.507 1.00 0.00 ATOM 30 N LYS 58 -15.483 -9.395 -5.185 1.00 0.00 ATOM 31 CA LYS 58 -15.935 -9.526 -3.808 1.00 0.00 ATOM 32 CB LYS 58 -17.100 -10.511 -3.718 1.00 0.00 ATOM 33 CG LYS 58 -18.394 -10.000 -4.333 1.00 0.00 ATOM 34 CD LYS 58 -19.505 -11.031 -4.220 1.00 0.00 ATOM 35 CE LYS 58 -20.798 -10.520 -4.832 1.00 0.00 ATOM 36 NZ LYS 58 -21.883 -11.536 -4.767 1.00 0.00 ATOM 37 O LYS 58 -14.697 -9.508 -1.771 1.00 0.00 ATOM 38 C LYS 58 -14.807 -9.974 -2.900 1.00 0.00 ATOM 39 N GLU 59 -13.954 -10.861 -3.400 1.00 0.00 ATOM 40 CA GLU 59 -12.830 -11.356 -2.614 1.00 0.00 ATOM 41 CB GLU 59 -12.193 -12.568 -3.297 1.00 0.00 ATOM 42 CG GLU 59 -12.978 -13.859 -3.129 1.00 0.00 ATOM 43 CD GLU 59 -12.466 -14.972 -4.021 1.00 0.00 ATOM 44 OE1 GLU 59 -13.086 -16.057 -4.033 1.00 0.00 ATOM 45 OE2 GLU 59 -11.446 -14.759 -4.710 1.00 0.00 ATOM 46 O GLU 59 -11.262 -10.163 -1.267 1.00 0.00 ATOM 47 C GLU 59 -11.768 -10.300 -2.379 1.00 0.00 ATOM 48 N ASP 60 -11.416 -9.554 -3.425 1.00 0.00 ATOM 49 CA ASP 60 -10.374 -8.545 -3.281 1.00 0.00 ATOM 50 CB ASP 60 -9.949 -8.015 -4.653 1.00 0.00 ATOM 51 CG ASP 60 -9.307 -9.082 -5.516 1.00 0.00 ATOM 52 OD1 ASP 60 -8.888 -10.122 -4.964 1.00 0.00 ATOM 53 OD2 ASP 60 -9.222 -8.881 -6.746 1.00 0.00 ATOM 54 O ASP 60 -10.093 -6.928 -1.530 1.00 0.00 ATOM 55 C ASP 60 -10.831 -7.393 -2.402 1.00 0.00 ATOM 56 N LEU 61 -12.057 -6.939 -2.636 1.00 0.00 ATOM 57 CA LEU 61 -12.628 -5.838 -1.880 1.00 0.00 ATOM 58 CB LEU 61 -14.048 -5.533 -2.366 1.00 0.00 ATOM 59 CG LEU 61 -14.267 -4.158 -2.999 1.00 0.00 ATOM 60 CD1 LEU 61 -15.701 -4.011 -3.481 1.00 0.00 ATOM 61 CD2 LEU 61 -13.924 -3.051 -2.013 1.00 0.00 ATOM 62 O LEU 61 -12.235 -5.277 0.425 1.00 0.00 ATOM 63 C LEU 61 -12.654 -6.113 -0.386 1.00 0.00 ATOM 64 N LYS 62 -13.154 -7.289 -0.036 1.00 0.00 ATOM 65 CA LYS 62 -13.258 -7.691 1.352 1.00 0.00 ATOM 66 CB LYS 62 -13.923 -9.064 1.464 1.00 0.00 ATOM 67 CG LYS 62 -14.024 -9.591 2.886 1.00 0.00 ATOM 68 CD LYS 62 -14.895 -10.835 2.952 1.00 0.00 ATOM 69 CE LYS 62 -14.670 -11.596 4.248 1.00 0.00 ATOM 70 NZ LYS 62 -14.641 -10.691 5.429 1.00 0.00 ATOM 71 O LYS 62 -11.679 -7.135 3.065 1.00 0.00 ATOM 72 C LYS 62 -11.874 -7.707 1.987 1.00 0.00 ATOM 73 N ASN 63 -10.908 -8.319 1.302 1.00 0.00 ATOM 74 CA ASN 63 -9.554 -8.386 1.822 1.00 0.00 ATOM 75 CB ASN 63 -8.684 -9.278 0.934 1.00 0.00 ATOM 76 CG ASN 63 -9.010 -10.751 1.091 1.00 0.00 ATOM 77 ND2 ASN 63 -8.592 -11.556 0.121 1.00 0.00 ATOM 78 OD1 ASN 63 -9.629 -11.158 2.075 1.00 0.00 ATOM 79 O ASN 63 -8.362 -6.683 3.022 1.00 0.00 ATOM 80 C ASN 63 -8.900 -7.025 1.965 1.00 0.00 ATOM 81 N PHE 64 -8.950 -6.228 0.907 1.00 0.00 ATOM 82 CA PHE 64 -8.343 -4.911 0.952 1.00 0.00 ATOM 83 CB PHE 64 -8.373 -4.260 -0.431 1.00 0.00 ATOM 84 CG PHE 64 -7.718 -2.908 -0.479 1.00 0.00 ATOM 85 CD1 PHE 64 -6.340 -2.791 -0.524 1.00 0.00 ATOM 86 CD2 PHE 64 -8.480 -1.753 -0.480 1.00 0.00 ATOM 87 CE1 PHE 64 -5.738 -1.549 -0.568 1.00 0.00 ATOM 88 CE2 PHE 64 -7.879 -0.510 -0.525 1.00 0.00 ATOM 89 CZ PHE 64 -6.514 -0.405 -0.569 1.00 0.00 ATOM 90 O PHE 64 -8.389 -3.133 2.550 1.00 0.00 ATOM 91 C PHE 64 -9.031 -3.999 1.962 1.00 0.00 ATOM 92 N LEU 65 -10.333 -4.160 2.158 1.00 0.00 ATOM 93 CA LEU 65 -10.997 -3.302 3.128 1.00 0.00 ATOM 94 CB LEU 65 -12.517 -3.442 3.015 1.00 0.00 ATOM 95 CG LEU 65 -13.167 -2.799 1.789 1.00 0.00 ATOM 96 CD1 LEU 65 -14.651 -3.132 1.730 1.00 0.00 ATOM 97 CD2 LEU 65 -12.963 -1.292 1.800 1.00 0.00 ATOM 98 O LEU 65 -10.325 -2.771 5.360 1.00 0.00 ATOM 99 C LEU 65 -10.528 -3.647 4.532 1.00 0.00 ATOM 100 N ASP 66 -10.352 -4.933 4.796 1.00 0.00 ATOM 101 CA ASP 66 -9.894 -5.372 6.104 1.00 0.00 ATOM 102 CB ASP 66 -9.976 -6.895 6.217 1.00 0.00 ATOM 103 CG ASP 66 -9.356 -7.418 7.499 1.00 0.00 ATOM 104 OD1 ASP 66 -9.915 -7.149 8.582 1.00 0.00 ATOM 105 OD2 ASP 66 -8.311 -8.098 7.419 1.00 0.00 ATOM 106 O ASP 66 -8.064 -4.508 7.414 1.00 0.00 ATOM 107 C ASP 66 -8.468 -4.873 6.310 1.00 0.00 ATOM 108 N TYR 67 -7.707 -4.870 5.224 1.00 0.00 ATOM 109 CA TYR 67 -6.331 -4.411 5.256 1.00 0.00 ATOM 110 CB TYR 67 -5.690 -4.543 3.874 1.00 0.00 ATOM 111 CG TYR 67 -4.269 -4.035 3.805 1.00 0.00 ATOM 112 CD1 TYR 67 -3.215 -4.809 4.277 1.00 0.00 ATOM 113 CD2 TYR 67 -3.983 -2.785 3.272 1.00 0.00 ATOM 114 CE1 TYR 67 -1.911 -4.353 4.220 1.00 0.00 ATOM 115 CE2 TYR 67 -2.686 -2.313 3.207 1.00 0.00 ATOM 116 CZ TYR 67 -1.647 -3.109 3.687 1.00 0.00 ATOM 117 OH TYR 67 -0.350 -2.654 3.629 1.00 0.00 ATOM 118 O TYR 67 -5.637 -2.587 6.672 1.00 0.00 ATOM 119 C TYR 67 -6.370 -2.961 5.751 1.00 0.00 ATOM 120 N MET 68 -7.256 -2.158 5.171 1.00 0.00 ATOM 121 CA MET 68 -7.383 -0.749 5.538 1.00 0.00 ATOM 122 CB MET 68 -8.323 -0.027 4.571 1.00 0.00 ATOM 123 CG MET 68 -7.772 0.120 3.162 1.00 0.00 ATOM 124 SD MET 68 -6.227 1.047 3.110 1.00 0.00 ATOM 125 CE MET 68 -6.793 2.675 3.591 1.00 0.00 ATOM 126 O MET 68 -7.397 0.417 7.646 1.00 0.00 ATOM 127 C MET 68 -7.881 -0.490 6.960 1.00 0.00 ATOM 128 N GLU 69 -8.849 -1.287 7.388 1.00 0.00 ATOM 129 CA GLU 69 -9.427 -1.159 8.705 1.00 0.00 ATOM 130 CB GLU 69 -10.685 -2.022 8.824 1.00 0.00 ATOM 131 CG GLU 69 -11.852 -1.538 7.979 1.00 0.00 ATOM 132 CD GLU 69 -13.072 -2.429 8.106 1.00 0.00 ATOM 133 OE1 GLU 69 -12.955 -3.512 8.716 1.00 0.00 ATOM 134 OE2 GLU 69 -14.144 -2.044 7.596 1.00 0.00 ATOM 135 O GLU 69 -8.386 -1.016 10.867 1.00 0.00 ATOM 136 C GLU 69 -8.394 -1.553 9.760 1.00 0.00 ATOM 137 N VAL 70 -7.504 -2.471 9.412 1.00 0.00 ATOM 138 CA VAL 70 -6.475 -2.889 10.354 1.00 0.00 ATOM 139 CB VAL 70 -5.690 -4.106 9.829 1.00 0.00 ATOM 140 CG1 VAL 70 -4.588 -4.489 10.804 1.00 0.00 ATOM 141 CG2 VAL 70 -6.627 -5.279 9.588 1.00 0.00 ATOM 142 O VAL 70 -4.967 -1.645 11.731 1.00 0.00 ATOM 143 C VAL 70 -5.526 -1.739 10.647 1.00 0.00 TER END