# List of top-scoring protein chains for t2k-w0.5-1-str4-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1om2A	95	13.26	a.23.4.1	16520
1lb2B	84	14.77	a.60.3.1	77871
1wt4A	73	18.67		
1jndA	420	18.83	c.1.8.5,d.26.3.1	71757,71758
2g47A	990	18.83		
2v1tA	73	29.84		
3e11A	114	31.08	d.92.1.17	157969
2imgA	151	31.30		
2d5bA	500	31.59	a.27.1.1,c.26.1.1	131268,131269
3h9cA	547	36.94		
1ceo	343	38.23		
1gaiA	472	42.71	a.102.1.1	18819
2wk2A	540	45.89		
2wlzA	548	47.64		
3maxA	367	48.45		
1zz1A	369	48.84		
2eg2A	112	53.02		
1vytE	25	53.13	j.68.1.1	108912
1k04A	162	53.26	a.24.14.1	67904
2ebn	289	61.96		
3bzqA	114	64.13		
1bvyF	191	69.83	c.23.5.1	31207
1cznA	169	74.35	c.23.5.1	31181
3ew8A	388	75.54		
2kqzA	155	76.96		
3mlgA	189	80.17		
1woyA	500	80.48	a.27.1.1,c.26.1.1	121130,121131
2o66A	135	82.51		
3l3qA	427	83.97		
2jtvA	65	86.52		
2q4xA	221	86.74	a.132.1.3	139880
1go5A	69	88.86	a.5.2.3	65410