# List of top-scoring protein chains for t2k-w0.5-1-str2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1lb2B	84	10.85	a.60.3.1	77871
1om2A	95	13.34	a.23.4.1	16520
1wt4A	73	17.54		
1jndA	420	17.61	c.1.8.5,d.26.3.1	71757,71758
2d5bA	500	18.41	a.27.1.1,c.26.1.1	131268,131269
3h9cA	547	19.57		
2wk2A	540	22.38		
2wlzA	548	23.06		
1woyA	500	24.87	a.27.1.1,c.26.1.1	121130,121131
2g47A	990	27.42		
2imgA	151	29.97		
1ceo	343	30.30		
2v1tA	73	33.94		
1k04A	162	35.31	a.24.14.1	67904
3maxA	367	37.35		
2ebn	289	45.68		
1gaiA	472	46.11	a.102.1.1	18819
3e11A	114	48.09	d.92.1.17	157969
3ebvA	302	48.91		
1zz1A	369	52.63		
1at3A	247	52.96	b.57.1.1	27021
1c3pA	375	56.69	c.42.1.2	32606
1vytE	25	57.33	j.68.1.1	108912
2q4xA	221	68.67	a.132.1.3	139880
2hpsA	186	68.86		
1cznA	169	69.29	c.23.5.1	31181
2vqmA	413	71.29		
2eg2A	112	72.25		
3gu2A	336	79.02		
3g6mA	406	79.12		
2jtvA	65	79.58		
3mlgA	189	81.34		
3bzqA	114	84.21		
1wthD	391	85.51	b.106.1.1,b.106.1.1	121268,121269
2gw8A	114	85.56		
3fg1A	696	86.57		
2rc3A	135	88.46	d.37.1.1	151867
3ew8A	388	89.46		
2o66A	135	89.99