# List of top-scoring protein chains for t2k-w0.5-1-o_sep-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1lb2B	84	18.53	a.60.3.1	77871
1om2A	95	20.05	a.23.4.1	16520
3e11A	114	27.03	d.92.1.17	157969
1wt4A	73	31.73		
1jndA	420	32.37	c.1.8.5,d.26.3.1	71757,71758
2v1tA	73	38.04		
2wk2A	540	38.70		
2imgA	151	39.20		
1ceo	343	41.53		
2ebn	289	41.92		
2g47A	990	45.98		
1zz1A	369	46.64		
2d5bA	500	47.56	a.27.1.1,c.26.1.1	131268,131269
2wlzA	548	49.38		
1cznA	169	50.70	c.23.5.1	31181
1vytE	25	57.68	j.68.1.1	108912
1c3pA	375	58.06	c.42.1.2	32606
1k04A	162	58.07	a.24.14.1	67904
1kevA	351	72.50	b.35.1.2,c.2.1.1	24749,29765
2eg2A	112	72.75		
1gc5A	467	72.98	c.72.1.3	60429
2hpsA	186	74.17		
3g6mA	406	74.27		
3m8nA	225	74.42		
2jtvA	65	78.08		
3maxA	367	82.48		
3bct	457	84.40		
3fg1A	696	87.62