# List of top-scoring protein chains for t2k-w0.5-1-n_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2g47A	990	14.09		
1lb2B	84	17.75	a.60.3.1	77871
3e11A	114	21.25	d.92.1.17	157969
3h9cA	547	24.07		
1om2A	95	24.64	a.23.4.1	16520
2d5bA	500	28.93	a.27.1.1,c.26.1.1	131268,131269
1wt4A	73	29.43		
1l5xA	280	33.68	c.106.1.1	77718
1k04A	162	36.74	a.24.14.1	67904
3ebvA	302	36.75		
2imgA	151	46.01		
1xu2R	47	46.08	g.24.1.2	116042
2v1tA	73	48.10		
2q4xA	221	50.72	a.132.1.3	139880
2ebn	289	51.88		
1ceo	343	53.21		
1vytE	25	53.79	j.68.1.1	108912
2vqmA	413	55.36		
1zz1A	369	55.54		
1jndA	420	56.38	c.1.8.5,d.26.3.1	71757,71758
2jtvA	65	60.93		
1kevA	351	61.38	b.35.1.2,c.2.1.1	24749,29765
3hr5B	226	69.84		
3fg1A	696	71.17		
1gc5A	467	71.93	c.72.1.3	60429
1c7gA	456	71.94	c.67.1.2	90415
2eg2A	112	72.47		
1wthD	391	72.99	b.106.1.1,b.106.1.1	121268,121269
1kteA	105	73.65	c.47.1.1	32771
3gg7A	254	74.02		
1cznA	169	74.81	c.23.5.1	31181
1y5hA	133	77.09	d.37.1.1	144595
1c3pA	375	77.61	c.42.1.2	32606
3maxA	367	77.79		
2wk2A	540	78.80		
2wlzA	548	81.15		
1woyA	500	82.24	a.27.1.1,c.26.1.1	121130,121131
1ponB	36	84.61		
2f2gA	221	86.03	a.132.1.3	132816
2kqzA	155	88.37