# List of top-scoring protein chains for t06-w0.5-1-o_sep-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1cipA	353	7.301	a.66.1.1,c.37.1.8	18210,32093
1gxmA	332	7.841	a.102.5.1	76371
2hwjA	205	11.18	d.268.1.3	147421
2w91A	653	11.20		
1yz4A	160	21.54		
1om2A	95	24.54	a.23.4.1	16520
1pfvA	551	26.11	a.27.1.1,c.26.1.1,g.41.1.1	94660,94661,94662
1wt4A	73	29.82		
1vloA	381	30.99	b.44.2.1,d.250.1.1	108838,108839
1vlyA	338	32.60	b.44.2.1,d.250.1.1	108871,108872
3feyC	467	35.93		
2v0cA	878	36.98		
1yx2A	365	38.00		
1wrmA	165	39.37		
3mu9A	171	40.35		
2wbyA	990	42.92		
2f2gA	221	45.30	a.132.1.3	132816
1rtwA	220	46.55	a.132.1.3	97823
3e4zA	990	49.38		
3a8jA	364	49.40		
3a8kA	364	50.89		
2ggrA	76	51.59		
1ac5A	483	51.82	c.69.1.5	34653
1vytE	25	52.65	j.68.1.1	108912
2qorA	204	53.68		
2c0hA	353	54.30	c.1.8.3	129594
3ix3A	173	63.99		
2ooqA	286	64.86		
3n0lA	417	69.57		
3e11A	114	71.26	d.92.1.17	157969
3hkeA	451	77.78		
3gw4A	203	77.80		
2jtvA	65	78.79		
2eg2A	112	79.64		
3cwwA	990	81.07		
2v1tA	73	82.96		
3ct7A	231	83.36		
2js7A	160	84.58		
1xu2R	47	87.28	g.24.1.2	116042
2z6oA	172	87.30		
3ezzA	144	89.35