# List of top-scoring protein chains for t06-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2hwjA	205	2.709	d.268.1.3	147421
1cipA	353	4.170	a.66.1.1,c.37.1.8	18210,32093
1gxmA	332	7.405	a.102.5.1	76371
2w91A	653	10.25		
1yz4A	160	17.04		
2avxA	171	21.91		
2wbyA	990	22.19		
3ix3A	173	22.26		
1yx2A	365	22.58		
1pfvA	551	24.51	a.27.1.1,c.26.1.1,g.41.1.1	94660,94661,94662
1om2A	95	25.70	a.23.4.1	16520
1wt4A	73	29.75		
3e4zA	990	30.20		
1vloA	381	31.64	b.44.2.1,d.250.1.1	108838,108839
3cx5A	431	32.12	d.185.1.1,d.185.1.1	157076,157077
1ac5A	483	35.31	c.69.1.5	34653
1wrmA	165	36.39		
2f2gA	221	38.17	a.132.1.3	132816
1vlyA	338	40.43	b.44.2.1,d.250.1.1	108871,108872
1bli	483	43.68		
1xu2R	47	43.72	g.24.1.2	116042
1kte	105	46.21		
1rtwA	220	49.16	a.132.1.3	97823
2ooqA	286	50.73		
3a8jA	364	51.33		
3a8kA	364	53.15		
3cwwA	990	55.06		
2cygA	312	56.56	c.1.8.3	131025
2c0hA	353	58.29	c.1.8.3	129594
1vytE	25	59.05	j.68.1.1	108912
2ggrA	76	59.95		
2gtqA	867	60.12		
3kgdA	358	61.63		
2z6oA	172	61.98		
3mu9A	171	63.55		
3k1hA	158	64.08		
1o5kA	306	67.75	c.1.10.1	92504
2jtvA	65	67.98		
2viuA	328	70.39	b.19.1.2	23797
1mzbA	136	70.61	a.4.5.42	91497
2qorA	204	72.47		
2kqzA	155	75.79		
3e11A	114	77.38	d.92.1.17	157969
2jqyA	280	78.32		
3bzqA	114	79.12		
3cz8A	319	80.79		
3dcoA	451	83.05		
2x6mA	126	84.56		
1wthD	391	85.12	b.106.1.1,b.106.1.1	121268,121269
2uv0E	175	86.28		
2v0cA	878	86.89		
2dvyA	226	88.41