Best Alignments for T0639

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template Template E-value A2M alignment SCOP Domain(s)
1zzwA 1.4713e+01 1zzwA/T0639-1zzwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2avxA 1.8415e+01 2avxA/T0639-2avxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1yz4A 2.1773e+01 1yz4A/T0639-1yz4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1wrmA 2.3747e+01 1wrmA/T0639-1wrmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3ix3A 2.4807e+01 3ix3A/T0639-3ix3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1vytE 2.8997e+01 1vytE/T0639-1vytE-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m j.68.1.1
2hwjA 3.0714e+01 2hwjA/T0639-2hwjA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m d.268.1.3
1jndA 3.5982e+01 1jndA/T0639-1jndA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m c.1.8.5
d.26.3.1
2v1tA 3.6063e+01 2v1tA/T0639-2v1tA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2uv0E 3.7387e+01 2uv0E/T0639-2uv0E-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2z6oA 3.8487e+01 2z6oA/T0639-2z6oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1zckA 3.8628e+01 1zckA/T0639-1zckA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2imgA 3.8864e+01 2imgA/T0639-2imgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1zclA 3.8872e+01 1zclA/T0639-1zclA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1wt4A 4.0107e+01 1wt4A/T0639-1wt4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1woyA 4.1782e+01 1woyA/T0639-1woyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m a.27.1.1
c.26.1.1
2j16A 4.6526e+01 2j16A/T0639-2j16A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3fg1A 5.1052e+01 3fg1A/T0639-3fg1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2w91A 5.4866e+01 2w91A/T0639-2w91A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3ibxA 5.4883e+01 3ibxA/T0639-3ibxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001