# List of top-scoring protein chains for t04-w0.5-1-CB_burial_14_7-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1jndA	420	16.32	c.1.8.5,d.26.3.1	71757,71758
1zzwA	149	19.71		
2w00A	1038	19.76		
2jtvA	65	20.64		
1wthD	391	21.01	b.106.1.1,b.106.1.1	121268,121269
1zckA	154	21.46		
1zclA	180	22.46		
3i2wA	290	27.55		
1yz4A	160	32.82		
2hwjA	205	38.14	d.268.1.3	147421
3ibxA	221	39.86		
2ok8A	316	39.99		
1sfuA	75	40.90	a.4.5.19	105503
3gbvA	304	41.94		
1zcbA	362	48.38	a.66.1.1,c.37.1.8	124901,124902
2imgA	151	51.91		
1nr3A	122	55.88	d.236.1.1	86092
1sz7A	200	60.46		
1kteA	105	62.43	c.47.1.1	32771
2yziA	138	65.83	d.37.1.1	153902
3bzqA	114	68.52		
3iqlA	71	68.83		
2vh3A	113	68.83		
2qsaA	109	69.29		
1tvkA	440	70.13	c.32.1.1,d.79.2.1	107362,107363
1azsC	388	71.24	a.66.1.1,c.37.1.8	18203,32086
2govA	195	71.26	d.60.1.4	135447
3bs3A	76	72.43		
1wrmA	165	76.53		
2z6oA	172	83.30