PFRMAT SS
TARGET T0635
AUTHOR SAM-T02-server
METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    7 (1 EBGHSTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0635.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 1143
METHOD
MODEL 1
M C 0.998
S C 0.818
L C 0.381
N C 0.380
T C 0.338
E E 0.327
I C 0.270
E C 0.346
M H 0.496
N H 0.770
E H 0.788
L H 0.848
L H 0.877
E H 0.841
K H 0.857
A H 0.798
K H 0.673
K H 0.456
I H 0.319
K E 0.408
C E 0.701
L E 0.841
I E 0.882
C E 0.796
D C 0.510
V T 0.346
D T 0.397
G S 0.260
V E 0.490
L E 0.503
S T 0.301
D T 0.379
G S 0.493
L C 0.423
L E 0.834
H E 0.861
I E 0.777
D C 0.506
N T 0.608
H T 0.545
G S 0.451
N C 0.469
E E 0.442
L E 0.446
K E 0.399
S E 0.377
F C 0.384
H C 0.593
V C 0.288
Q H 0.258
D H 0.310
G H 0.395
M E 0.318
G H 0.399
L H 0.511
K H 0.591
L H 0.636
L H 0.710
M H 0.725
A H 0.681
A T 0.492
G T 0.735
I C 0.593
Q E 0.665
V E 0.862
A E 0.894
I E 0.909
I E 0.797
T E 0.398
T T 0.228
A T 0.296
Q C 0.256
N C 0.275
A H 0.460
V H 0.585
V H 0.672
D H 0.669
H H 0.641
R H 0.716
M H 0.695
E H 0.549
Q H 0.298
L T 0.554
G T 0.355
I E 0.426
T E 0.745
H E 0.830
Y E 0.747
Y E 0.580
K C 0.236
G T 0.500
Q T 0.369
V C 0.374
D C 0.565
K H 0.561
R H 0.884
S H 0.941
A H 0.973
Y H 0.992
Q H 0.995
H H 0.996
L H 0.996
K H 0.997
K H 0.989
T H 0.925
L T 0.565
G T 0.816
L C 0.878
N C 0.954
D G 0.668
D G 0.594
E G 0.539
F E 0.509
A E 0.670
Y E 0.806
I E 0.576
G C 0.344
D C 0.506
D S 0.371
L H 0.358
P H 0.314
D H 0.490
L H 0.970
P H 0.975
L H 0.972
I H 0.974
Q H 0.935
Q H 0.835
V H 0.608
G T 0.520
L C 0.263
G C 0.273
V E 0.338
A C 0.378
V G 0.274
S G 0.378
N T 0.355
A H 0.281
V C 0.479
P H 0.917
Q H 0.952
V H 0.961
L H 0.941
E H 0.911
F H 0.674
A C 0.672
D S 0.782
W E 0.949
R E 0.968
T E 0.953
E E 0.687
R C 0.580
T S 0.437
G T 0.441
G C 0.308
R H 0.636
G H 0.761
A H 0.938
V H 0.979
R H 0.992
E H 0.994
L H 0.997
C H 0.998
D H 0.998
L H 0.997
I H 0.996
L H 0.981
N H 0.901
A H 0.834
Q H 0.675
N H 0.573
K H 0.607
A H 0.939
E H 0.973
L H 0.974
A H 0.979
I H 0.970
T H 0.933
G H 0.862
Y H 0.757
L H 0.454
K T 0.387
Q S 0.276
E C 0.322
G C 0.408
H C 0.393
H C 0.338
H C 0.272
H C 0.330
H C 0.591
H C 0.960
END