T0635.best_hits

Sequence_ID	Length	Evalue	FSSP-rep	SCOP_domain
2r8eA	188	1.6270e-39
3i6bA	180	1.9485e-38
3mn1A	189	5.7455e-32
1k1eA	180	7.0881e-31		c.108.1.5
3ij5A	211	1.1355e-28
3ewiA	168	2.1909e-28
2p9jA	162	2.6629e-28
3e8mA	164	2.4069e-26
3mmzA	176	3.5850e-26
1rkqA	282	6.0315e-21		c.108.1.10
3niwA	279	3.7290e-20
1wr8A	231	9.8509e-19		c.108.1.10
1nrwA	288	2.7102e-18		c.108.1.10
1nf2A	268	1.1690e-17		c.108.1.10
3dnpA	290	2.5399e-17
3mpoA	279	4.5787e-17
2hf2A	283	1.0004e-16
1rlmA	271	2.8351e-16		c.108.1.10
1rloA	271	7.1185e-16		c.108.1.10
2b30A	301	2.0579e-15		c.108.1.10
1ymqA	261	2.3809e-15		c.108.1.10
3daoA	283	3.0202e-15
1l6rA	227	9.7550e-15		c.108.1.10
3fzqA	274	5.8037e-14
1l7mA	211	8.2991e-14		c.108.1.4
1f5sA	211	1.2871e-13	1f5sA	c.108.1.4
1j97A	211	2.4003e-13	1f5sA	c.108.1.4
2rbkA	261	2.7444e-13		c.108.1.10
1s2oA	244	1.1984e-11		c.108.1.10
2qyhA	258	2.3761e-11
3gygA	289	4.6055e-11
3m1yA	217	1.4567e-10
2ravA	261	5.1518e-10
2iyeA	263	1.3374e-09
2b8eA	273	1.1073e-08		d.220.1.1
				c.108.1.7
2voyI	128	2.1738e-08
3a1dA	287	7.0544e-08
3a1eA	287	8.8702e-08
2zosA	249	9.5750e-07
1nnlA	225	2.7556e-06		c.108.1.4
1y8aA	332	4.3476e-06		c.108.1.24
2hszA	243	6.2540e-06		c.108.1.6
1wzcA	249	7.7076e-06		c.108.1.10
2hi0A	240	1.0081e-05
1l7pA	211	1.1321e-05		c.108.1.4
2wm8A	187	1.3034e-05
1xviA	275	1.7111e-05		c.108.1.10
2go7A	207	1.8653e-05		c.108.1.6
3m9lA	205	2.0298e-05
3kd3A	219	3.0162e-05
2ah5A	210	3.9442e-05		c.108.1.6
3d6jA	225	6.0582e-05
2nyvA	222	8.4407e-05
2hoqA	241	1.2316e-04
3fvvA	232	1.2865e-04
1rkuA	206	1.4987e-04		c.108.1.11
1vjrA	271	2.4056e-04		c.108.1.14
1u7pA	165	2.7507e-04		c.108.1.17
2o2xA	218	4.4541e-04		c.108.1.19
1x42A	232	4.5379e-04		c.108.1.1
2dqsA	995	7.3647e-04
2cftA	298	8.4381e-04
3b8cA	885	1.0698e-03
1mhsA	920	1.6152e-03		i.18.1.1
2x4dA	271	1.7460e-03
2oycA	306	1.9506e-03
2b0cA	200	2.4586e-03		c.108.1.2
1wpgA	994	3.9135e-03		c.108.1.7
				f.33.1.1
				b.82.7.1
				d.220.1.1
1swvA	258	4.1957e-03		c.108.1.3
3i76A	224	6.6965e-03
2fueA	262	6.8445e-03		c.108.1.10
1rdfA	264	7.3127e-03		c.108.1.3
3cnhA	201	8.3314e-03
2zxeA	1028	2.4738e-02
1qyiA	381	3.0706e-02		c.108.1.13

Please cite the following papers:

Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001
Karplus, K. and Karchin, R. and Draper, J. and Casper, J. and Mandel-Gutfreund, Y. and Diekhans, M. and Hughey, R. ``Combining local-structure, fold-recognition, and new-fold methods for protein structure prediction'' Proteins: Structure Function and Genetics53(S6):491-496,15 Oct 2003
Rachel Karchin, Melissa Cline, Yael Mandel-Gutfreund, and Kevin Karplus. ``Hidden Markov models that use predicted local structure for fold recognition: alphabets of backbone geometry.'' Proteins: Structure, Function, and Genetics, 51(4):504--514, June 2003.