PFRMAT SS
TARGET T0634
AUTHOR SAM-T02-server
METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    7 (1 EBGHSTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0634.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 1163
METHOD
MODEL 1
M C 0.999
S C 0.900
L C 0.478
K E 0.365
K E 0.894
I E 0.978
L E 0.985
I E 0.897
I C 0.547
D C 0.675
Q C 0.609
Q H 0.779
D H 0.912
F H 0.974
S H 0.989
R H 0.991
I H 0.994
E H 0.995
L H 0.994
K H 0.988
N H 0.980
F H 0.962
L H 0.895
D H 0.680
S T 0.782
E T 0.936
Y C 0.751
L E 0.819
V E 0.947
I E 0.964
E E 0.906
S E 0.583
K S 0.416
N S 0.666
E H 0.422
K H 0.951
E H 0.978
A H 0.987
L H 0.991
E H 0.987
Q H 0.985
I H 0.975
D H 0.924
H H 0.661
H H 0.509
H C 0.751
P C 0.856
D S 0.831
L E 0.949
V E 0.982
I E 0.982
L E 0.935
D E 0.597
M E 0.320
D C 0.314
I C 0.443
I T 0.451
G T 0.513
E C 0.445
N C 0.433
S H 0.701
P H 0.944
N H 0.968
L H 0.969
C H 0.970
L H 0.964
K H 0.934
L H 0.888
K H 0.735
R H 0.533
S C 0.598
K T 0.524
G T 0.562
L G 0.436
K T 0.421
N T 0.405
V C 0.455
P E 0.628
L E 0.959
I E 0.983
L E 0.979
L E 0.956
F E 0.782
S E 0.469
S C 0.317
E S 0.303
H C 0.344
K H 0.896
E H 0.938
A H 0.956
I H 0.971
V H 0.966
N H 0.889
G H 0.821
L H 0.742
H H 0.458
S T 0.461
G T 0.448
A C 0.523
D S 0.495
D E 0.281
Y E 0.462
L E 0.562
T E 0.413
K C 0.457
P C 0.645
F C 0.637
N C 0.774
R H 0.877
N H 0.968
D H 0.980
L H 0.996
L H 0.995
S H 0.995
R H 0.996
I H 0.997
E H 0.998
I H 0.997
H H 0.996
L H 0.989
R H 0.966
T H 0.923
Q H 0.888
N H 0.820
Y H 0.780
Y H 0.824
S H 0.864
D H 0.868
L H 0.840
R H 0.792
K H 0.671
N T 0.431
E T 0.345
G C 0.270
H C 0.263
H C 0.402
H C 0.442
H C 0.378
H C 0.607
H C 0.948
END