T0633.t2k.100-30-stride-ebghtl

Sequence_ID	Length	Evalue	FSSP-rep	SCOP_domain
2gcuA	245	2.98e-27
1qh5A	260	1.39e-22	1qh5A	d.157.1.2
1xm8A	254	3.01e-22		d.157.1.2
2obwA	258	2.61e-21
2qedA	258	2.61e-21		d.157.1.2
2zwrA	207	7.65e-21
2p18A	311	3.13e-17
2gmnA	274	1.47e-12		d.157.1.1
2zo4A	317	2.21e-11
1k07A	263	2.96e-11		d.157.1.1
1smlA	269	3.72e-11	1smlA	d.157.1.1
2aioA	269	3.72e-11		d.157.1.1
3adrA	261	9.58e-10
1yt8A	539	1.29e-09		c.46.1.2
				c.46.1.2
				c.46.1.2
				c.46.1.2
3icsA	588	3.31e-09
3emeA	103	9.55e-09
2eg4A	230	1.30e-08
3gk5A	108	1.63e-08
2hhgA	139	1.91e-08
1e0cA	271	2.95e-08	1e0cA	c.46.1.2
				c.46.1.2
2q0iA	303	3.18e-08		d.157.1.14
3fojA	100	3.56e-08
3k9rA	115	9.48e-08
1m2xA	223	9.81e-08		d.157.1.1
3ilmA	141	1.31e-07
3hixA	106	1.44e-07
3l6nA	219	1.50e-07
1mqoA	227	2.26e-07		d.157.1.1
1gmxA	108	3.66e-07		c.46.1.3
1dxkA	227	3.83e-07	1a7tA	d.157.1.1
2kl3A	132	5.00e-07
2p97A	201	5.43e-07		d.157.1.12
1znbA	232	1.35e-06	1a7tA	d.157.1.1
1a7tA	232	1.94e-06	1a7tA	d.157.1.1
1jjeA	222	2.14e-06	1a7tA	d.157.1.1
1ztcA	221	2.61e-06		d.157.1.11
1vmeA	410	3.07e-06		c.23.5.1
				d.157.1.3
2fhxA	246	4.15e-06
1jjtA	228	4.64e-06	1a7tA	d.157.1.1
3d1pA	139	6.53e-06
3hwiA	298	8.27e-06
3aayA	277	8.74e-06
3hzuA	318	9.12e-06
2whgA	230	1.01e-05
2ohhA	404	1.70e-05
1ko3A	230	2.21e-05		d.157.1.1
2a7mA	250	2.74e-05
3dhaA	254	3.23e-05
3flhA	124	3.57e-05
1uarA	285	4.27e-05		c.46.1.2
				c.46.1.2
1rhs	296	9.08e-05	1rhs
1rhsA	296	9.08e-05		c.46.1.2
				c.46.1.2
3af5A	651	1.21e-04
3ie2A	431	1.93e-04
3g5jA	134	2.86e-04
3idzA	431	4.40e-04
1x8gA	227	4.59e-04		d.157.1.1
2qdsA	227	4.59e-04		d.157.1.1
1wraA	308	4.72e-04		d.157.1.8
2p4zA	284	5.32e-04
1x8hA	228	5.36e-04		d.157.1.1
3ie1A	431	5.38e-04
3iogA	227	5.48e-04
3ipoA	416	5.55e-04
1p9eA	331	6.03e-04		d.157.1.5
3ie0A	431	6.78e-04
1wv9A	94	7.86e-04
3i3uA	112	8.28e-04
2bibA	547	8.65e-04		b.109.1.1
				d.157.1.8
2dkfA	431	8.84e-04		d.157.1.10
3i2vA	127	1.38e-03
3a4yA	431	2.63e-03
3bk2A	562	2.84e-03
1e5dA	402	3.52e-03	1e5dA	c.23.5.1
				d.157.1.3
2az4A	429	4.39e-03		d.157.1.10
2fsxA	148	7.92e-03
1t3kA	152	2.42e-02		c.46.1.1
2q9uA	414	2.58e-02
1c25	161	2.86e-02	1c25
1zkpA	268	4.34e-02		d.157.1.9
1qb0A	211	4.85e-02	1c25	c.46.1.1
2cfuA	658	6.06e-02		d.106.1.3
				d.157.1.13
3hnnA	262	7.01e-02
1y44A	320	7.68e-02		d.157.1.7
3duwA	223	8.65e-02
1okgA	373	9.57e-02		c.46.1.2
				c.46.1.2
				d.26.1.3
1ymkA	175	1.03e-01		c.46.1.1
3eshA	280	1.07e-01

Sequence_ID	Length	Evalue	FSSP-rep	SCOP_domain
1o94A	729	1.98e-01		c.1.4.1
				c.3.1.1
				c.4.1.1
2a2kA	175	2.08e-01
2gpyA	233	2.15e-01
2tmdA	729	2.35e-01	2tmdA	c.1.4.1
				c.3.1.1
				c.4.1.1
1djqA	729	2.53e-01	2tmdA	c.1.4.1
				c.3.1.1
				c.4.1.1
3c3pA	210	2.54e-01
3g1pA	258	3.71e-01
3ktcA	333	3.92e-01
3c3yA	237	3.92e-01
2oucA	142	4.18e-01
2wylA	360	5.11e-01
3h3eA	267	5.55e-01
3cs3A	277	6.35e-01
1vgvA	384	7.84e-01		c.87.1.3
2hcrA	326	8.02e-01
1q3qA	548	8.16e-01		a.129.1.2
				c.8.5.2
				d.56.1.2
1f6dA	376	8.80e-01	1f6dA	c.87.1.3
1a6dA	545	9.28e-01	1a6dA	a.129.1.2
				c.8.5.2
				d.56.1.2
3bwyA	214	9.40e-01
1hzmA	154	1.02e+00		c.46.1.1
2gwfA	157	1.09e+00		c.46.1.4
1v8bA	479	1.10e+00		c.2.1.4
				c.23.12.3
2hnkA	239	1.15e+00
3mag	307	1.18e+00	3mag
2vswA	153	1.22e+00
1wb4A	297	1.34e+00		c.69.1.2
2fk6A	320	1.34e+00		d.157.1.7
1whbA	157	1.38e+00		c.46.1.4
2dy0A	190	1.45e+00
2e7yA	280	1.49e+00		d.157.1.7
2cl5A	221	1.50e+00		c.66.1.1
1gkkA	297	1.59e+00		c.69.1.2
2i7vA	459	1.69e+00
3itvA	438	1.81e+00
2i57A	438	2.05e+00
1v39	322	2.07e+00	3mag
2r2dA	276	2.35e+00
1h1dA	221	2.57e+00		c.66.1.1
2csuA	457	2.79e+00		c.2.1.8
				c.23.4.1
				c.23.4.1
3brqA	296	2.87e+00
1vid	221	2.95e+00	1vid
2pcqA	283	3.06e+00
1p3dA	475	3.20e+00		c.5.1.1
				c.59.1.1
				c.72.2.1
1l3iA	192	3.26e+00		c.66.1.22
1av6A	289	3.44e+00	3mag	c.66.1.25
1nu5A	370	3.59e+00		c.1.11.2
				d.54.1.1
3md7A	293	3.60e+00
1k66A	149	3.62e+00		c.23.1.1
2aznA	219	3.66e+00		c.71.1.2
1np7A	489	3.75e+00		a.99.1.1
				c.28.1.1
3f4aA	169	3.95e+00
3mtiA	185	3.99e+00
2p8bA	369	4.00e+00
2egvA	229	4.00e+00
1o6cA	388	4.20e+00		c.87.1.3
2xahA	852	4.26e+00
3bh1A	507	4.55e+00
1a4mA	349	4.55e+00	1a4mA	c.1.9.1
3n9nA	528	4.58e+00
3cbgA	232	4.65e+00
2qw5A	335	4.79e+00
2qipA	165	5.21e+00
2bvyA	475	5.21e+00		b.1.18.2
				c.1.8.3
3ll5A	249	5.25e+00
2okjA	504	5.35e+00
1vflA	356	5.45e+00		c.1.9.1
1uteA	313	5.46e+00	1uteA	d.159.1.1
2cbnA	306	5.60e+00		d.157.1.7
1a6dB	543	5.63e+00	1a6dA	a.129.1.2
				c.8.5.2
				d.56.1.2
1opr	213	5.69e+00	1opr
1uozA	315	5.72e+00		c.6.1.1
1o5oA	221	5.76e+00		c.61.1.1
3fr7A	525	5.80e+00
2yu1A	451	5.88e+00
2qdeA	397	5.97e+00
3hviA	221	5.99e+00
2zvrA	290	6.07e+00
1dnpA	471	6.17e+00	1qnf	a.99.1.1
				c.28.1.1
1pvdA	537	6.22e+00	1zpdA	c.31.1.3

Sequence_ID	Length	Evalue	FSSP-rep	SCOP_domain
				c.36.1.5
				c.36.1.9
1qmgA	524	6.33e+00	1qmgA	a.100.1.2
				c.2.1.6
2hi6A	141	6.45e+00		c.8.2.3
3f81A	183	6.51e+00
3fkmX	166	6.51e+00
3hgoA	402	6.56e+00
1g71A	347	6.62e+00	1g71A	d.264.1.1
3ho1A	685	6.62e+00
1vr0A	247	6.63e+00		c.148.1.1
1vpt	348	7.03e+00	3mag
1vptA	348	7.03e+00		c.66.1.25
1pf5A	131	7.04e+00		d.79.1.1
1qorA	327	7.10e+00	1qorA	b.35.1.2
				c.2.1.1
2eggA	297	7.11e+00
1e69B	322	7.13e+00	1e69B	c.37.1.12
3g89A	249	7.39e+00
3e3mA	355	7.40e+00
2p90A	319	7.44e+00		c.56.8.1
1i4nA	251	7.46e+00		c.1.2.4
1khdA	345	7.54e+00		a.46.2.1
				c.27.1.1
1tt7A	330	7.93e+00		b.35.1.2
				c.2.1.1
3dxyA	218	8.09e+00
1prxA	224	8.09e+00	1prxA	c.47.1.10
1ox6A	555	8.16e+00		c.1.2.1
				c.23.16.1
3ec1A	369	8.19e+00
3a32A	471	8.23e+00
1eia	207	8.30e+00	1eia
2f9zC	159	8.56e+00		d.194.1.3
2blnA	305	8.78e+00		b.46.1.1
				c.65.1.1
2ogeA	399	8.83e+00
2zdsA	340	8.84e+00
1fxdA	58	9.03e+00		d.58.1.4
1icwA	72	9.31e+00	1tvxA	d.9.1.1
3lm8A	222	9.37e+00
1v33A	366	9.59e+00		d.264.1.1
2gtiA	370	9.79e+00		c.66.1.48
				d.294.1.2
3ib7A	330	9.94e+00
2r6hA	290	9.94e+00
3lhdA	253	9.97e+00
2olsA	794	9.98e+00
1qpzA	340	1.00e+01	1qpzA	a.35.1.5
				c.93.1.1
1ixkA	315	1.01e+01		c.66.1.38
1o54A	277	1.02e+01		c.66.1.13
2a8aA	439	1.02e+01
2cw8A	537	1.05e+01
1qfcA	306	1.06e+01	1uteA	d.159.1.1
3hgjA	349	1.07e+01
1cfr	285	1.07e+01	1cfr
1cfrA	285	1.07e+01		c.52.1.7
1vhrA	184	1.08e+01	1vhrA	c.45.1.1
3gazA	343	1.08e+01
3mb5A	255	1.08e+01
3figA	646	1.09e+01
2a97A	439	1.10e+01
2yveA	185	1.11e+01
3hpxA	425	1.12e+01
1fkx	349	1.12e+01	1a4mA
2x0lA	734	1.17e+01
3iqwA	334	1.19e+01
3l55A	353	1.20e+01
1dqzA	280	1.21e+01	1dqyA	c.69.1.3
3h1gA	129	1.22e+01
1vpwA	340	1.23e+01	1qpzA	a.35.1.5
				c.93.1.1
2a3nA	355	1.23e+01
2hszA	243	1.25e+01		c.108.1.6
1vybA	238	1.27e+01		d.151.1.1
1t2bA	397	1.28e+01
1fhvA	323	1.33e+01	1fhuA	c.1.11.2
				d.54.1.1
1r6wA	322	1.34e+01		c.1.11.2
				d.54.1.1
3g1uA	437	1.34e+01
2ashA	381	1.34e+01
3fvdA	378	1.36e+01
1vmaA	306	1.38e+01		a.24.13.1
				c.37.1.10
1pjcA	361	1.40e+01	1sayA	c.2.1.4
				c.23.12.2
2ww5A	468	1.41e+01
1yb5A	351	1.44e+01		b.35.1.2
				c.2.1.1
3h1fA	129	1.44e+01
3nheA	348	1.44e+01
1yliA	153	1.44e+01		d.38.1.1
1vjnA	220	1.45e+01		d.157.1.4
1e5mA	416	1.46e+01	1dd8A	c.95.1.1
				c.95.1.1
1ypfA	336	1.47e+01
1sayA	361	1.47e+01	1sayA	c.2.1.4
				c.23.12.2

Sequence_ID	Length	Evalue	FSSP-rep	SCOP_domain
1jykA	254	1.48e+01		c.68.1.13
1q3kA	259	1.50e+01		c.125.1.1
3dwyA	119	1.54e+01		a.29.2.1
2ivyA	101	1.56e+01		d.58.58.1
3i36A	342	1.58e+01
3gwgA	129	1.59e+01
3cinA	394	1.59e+01
1vjpA	394	1.59e+01		c.2.1.3
				d.81.1.3
1npyA	271	1.59e+01		c.2.1.7
				c.58.1.5
1ow4A	129	1.60e+01		a.39.2.1
2oc3A	303	1.60e+01
2qddA	378	1.60e+01
3lpmA	259	1.61e+01
3gvvA	367	1.62e+01
2x4dA	271	1.64e+01
3kw2A	257	1.64e+01
2z3yA	662	1.65e+01		a.4.1.18
				c.3.1.2
				d.16.1.5
1o89A	345	1.65e+01		b.35.1.2
				c.2.1.1
3dr5A	221	1.67e+01
3dp7A	363	1.67e+01
2q7tA	301	1.69e+01
1e6mA	128	1.69e+01	3chy	c.23.1.1
3a6fA	260	1.70e+01
1dqyA	283	1.70e+01	1dqyA	c.69.1.3
3eliA	152	1.71e+01		d.129.3.5
1w1iE	357	1.72e+01		c.1.9.1
1ako	268	1.73e+01	1ako
1akoA	268	1.73e+01		d.151.1.1
1vefA	395	1.75e+01		c.67.1.4
2fpqA	444	1.75e+01
1jftA	340	1.75e+01		a.35.1.5
				c.93.1.1
2pjzA	263	1.76e+01
1vjqA	79	1.76e+01		k.43.1.1
2f4dA	184	1.77e+01
2uz0A	263	1.77e+01
1vjzA	341	1.79e+01		c.1.8.3
2qsrA	173	1.81e+01
1xcbA	211	1.86e+01		a.4.5.38
				c.2.1.12
3kl7A	235	1.88e+01
1o1yA	239	1.88e+01		c.23.16.1
1jbeA	128	1.88e+01	3chy	c.23.1.1
1gu7A	364	1.90e+01		b.35.1.2
				c.2.1.1
1mucA	373	1.91e+01	1mucA	c.1.11.2
				d.54.1.1
3e9aA	286	1.91e+01
3hq1A	644	1.93e+01
1sr9A	644	1.93e+01		a.5.7.1
				c.1.10.5
				d.270.1.1
1xa0A	328	1.94e+01		b.35.1.2
				c.2.1.1
1oroA	213	1.94e+01	1opr	c.61.1.1
2qmaA	497	1.96e+01
3i31A	88	1.97e+01
3hm2A	178	1.98e+01
2f46A	156	1.98e+01
3ajdA	274	1.99e+01
2iqhA	499	2.01e+01		e.75.1.1
1u8tA	129	2.04e+01		c.23.1.1
3il8A	72	2.05e+01		d.9.1.1
1ta9A	450	2.05e+01
3chy	128	2.07e+01	3chy
2hmvA	144	2.10e+01		c.2.1.9
2yxxA	386	2.12e+01
1n9gA	386	2.13e+01		b.35.1.2
				c.2.1.1
1ckeA	227	2.15e+01	1ckeA	c.37.1.1
2ganA	190	2.15e+01		d.108.1.1
3et4A	255	2.17e+01
2plrA	213	2.18e+01
2i33A	258	2.22e+01
1umzA	278	2.22e+01		b.29.1.2
1wxqA	397	2.23e+01		c.37.1.8
				d.15.10.2
2atzA	180	2.23e+01		d.264.1.3
1eg7A	557	2.23e+01	1eg7A	c.37.1.10
3lmeA	138	2.25e+01
2e62A	61	2.27e+01
2oczA	231	2.31e+01
3fbtA	282	2.31e+01
3jynA	325	2.33e+01
1bykA	255	2.34e+01	1bykA	c.93.1.1
1m7bA	184	2.34e+01		c.37.1.8
3c5vA	316	2.36e+01
3b9oA	440	2.38e+01
1vbkA	307	2.40e+01		c.26.2.6
				d.308.1.1
1x42A	232	2.45e+01		c.108.1.1
3gxhA	157	2.45e+01
1lsuA	147	2.46e+01		c.2.1.9
1qpbA	563	2.46e+01	1zpdA	c.31.1.3
				c.36.1.5

Sequence_ID	Length	Evalue	FSSP-rep	SCOP_domain
				c.36.1.9
3cnhA	200	2.49e+01
1bd0A	388	2.50e+01	1bd0A	b.49.2.2
				c.1.6.1
2a0iA	330	2.50e+01
2ga9A	297	2.52e+01		c.66.1.25
1dbrA	231	2.55e+01	1qk3A	c.61.1.1
1exnA	290	2.56e+01	1exnA	a.60.7.1
				c.120.1.2
2hs8A	402	2.56e+01
2qahA	303	2.57e+01
3k35A	318	2.58e+01
3fcpA	381	2.58e+01
2pbnA	313	2.58e+01
3cz6A	168	2.61e+01
2pe4A	424	2.62e+01
3gw0A	367	2.63e+01
2cdnA	201	2.63e+01		c.37.1.1
3e70C	328	2.70e+01
2anrA	178	2.71e+01
3kzuA	428	2.71e+01
1bjnA	360	2.72e+01	1bjnA	c.67.1.4
3bdgA	458	2.74e+01
1mioB	458	2.75e+01	1qguB	c.92.2.3
1u2xA	474	2.75e+01		c.72.1.3
1d7oA	297	2.79e+01	1enp	c.2.1.2
2b49A	287	2.81e+01
1hv8A	367	2.81e+01	1hv8A	c.37.1.19
				c.37.1.19
1wl8A	189	2.82e+01		c.23.16.1
1e0tA	470	2.83e+01	1a49A	b.58.1.1
				c.1.12.1
				c.49.1.1
3jrlA	276	2.83e+01
1dbqA	289	2.85e+01	1qpzA	c.93.1.1
3b85A	208	2.88e+01
3hjnA	197	2.89e+01
2bx2L	517	2.91e+01
2bijA	305	2.94e+01
2o95A	187	2.95e+01
2a8dA	229	2.98e+01
2c7yA	404	3.01e+01
3mggA	276	3.01e+01
1u8sA	192	3.01e+01		d.58.18.5
				d.58.18.5
3en0A	291	3.01e+01
3dx9A	198	3.02e+01
1rxdA	159	3.05e+01		c.45.1.1
2dt5A	211	3.05e+01		a.4.5.38
				c.2.1.12
2whxA	618	3.06e+01
3hhdA	965	3.06e+01
3gwzA	369	3.08e+01
2hrdA	253	3.08e+01
1v7zA	260	3.09e+01		c.125.1.1
1fmjA	351	3.12e+01		c.37.1.5
2a61A	145	3.13e+01		a.4.5.28
1xwfA	431	3.14e+01		c.2.1.4
				c.23.12.3
1pqwA	198	3.16e+01		c.2.1.1
2qghA	425	3.17e+01
2kglA	195	3.17e+01
1dkuA	317	3.18e+01	1dkuA	c.61.1.2
				c.61.1.2
3ddoA	253	3.18e+01
1b3rA	431	3.19e+01	1b3rA	c.2.1.4
				c.23.12.3
2p0lA	288	3.19e+01		d.104.1.3
3c9fA	557	3.20e+01		d.114.1.1
				d.159.1.2
3ffrA	362	3.21e+01
1rxyA	253	3.22e+01		c.56.2.1
1f8rA	498	3.22e+01	1f8rA	c.3.1.2
				d.16.1.5
1uc8A	280	3.24e+01		c.30.1.6
				d.142.1.7
1enp	312	3.24e+01	1enp
2fvyA	309	3.25e+01		c.93.1.1
1lssA	140	3.25e+01		c.2.1.9
2iidA	498	3.27e+01		c.3.1.2
				d.16.1.5
2i5eA	211	3.27e+01		c.68.1.21
2yweA	600	3.27e+01
3e05A	204	3.28e+01
1ajaA	449	3.29e+01	1b8jA	c.76.1.1
1zsqA	528	3.29e+01		b.55.1.8
				c.45.1.3
1s3eA	520	3.30e+01		c.3.1.2
				d.16.1.5
1jvnA	555	3.30e+01		c.1.2.1
				c.23.16.1
3llwA	311	3.31e+01
2wnsA	205	3.32e+01
1kcfA	258	3.32e+01		a.140.2.1
				c.55.3.7
2vk8A	563	3.32e+01
1eluA	390	3.35e+01	1elqA	c.67.1.3
2jlqA	451	3.35e+01
1jpkA	388	3.36e+01		c.1.22.1
2i8aA	252	3.36e+01

Sequence_ID	Length	Evalue	FSSP-rep	SCOP_domain
1ukz	203	3.36e+01	1zin
1ukzA	203	3.36e+01		c.37.1.1
3g5wA	318	3.36e+01
2qdkA	252	3.38e+01
1y81A	138	3.42e+01		c.2.1.8
2i4iA	417	3.44e+01
3cvoA	202	3.44e+01
2rdpA	150	3.45e+01
2vq3A	215	3.48e+01
1uedA	406	3.51e+01		a.104.1.1
1zi8A	236	3.53e+01
3hzhA	157	3.56e+01
2yxzA	311	3.56e+01
3fkeA	129	3.58e+01
3i3wA	443	3.59e+01
2p3eA	420	3.60e+01
2plsA	86	3.62e+01		d.145.1.4
1uroA	367	3.63e+01	1uroA	c.1.22.1
2wzqA	619	3.63e+01
1yexA	186	3.64e+01		c.47.1.10
2r5vA	357	3.66e+01
3fsuA	304	3.66e+01
3c48A	438	3.67e+01
1kkhA	317	3.67e+01		d.14.1.5
				d.58.26.3
2oo3A	283	3.67e+01		c.66.1.59
1z77A	200	3.68e+01		a.4.1.9
				a.121.1.1
3fstA	304	3.69e+01
1uumA	372	3.69e+01		c.1.4.1
1wtjA	343	3.70e+01
2hd5A	359	3.72e+01		d.3.1.9
3ff4A	122	3.72e+01
3bdzA	397	3.72e+01
3es7A	391	3.75e+01
1ab5A	125	3.80e+01	3chy	c.23.1.1
1z85A	234	3.80e+01
2oqyA	391	3.80e+01
3gd6A	391	3.81e+01
2wvgA	568	3.81e+01
1r3sA	367	3.83e+01		c.1.22.1
3douA	191	3.83e+01
2gekA	406	3.87e+01
3gw3A	367	3.88e+01
1nvmA	345	3.89e+01		a.5.7.1
				c.1.10.5
2b3hA	329	3.91e+01
3ga2A	246	3.91e+01
1dik	874	3.91e+01	1dik
1zckA	154	3.92e+01
3l2aA	129	3.93e+01
3e60A	424	3.96e+01
2lbd	267	3.96e+01	2lbd
1wu7A	434	3.96e+01		c.51.1.1
				d.104.1.1
1bvzA	585	3.98e+01	1bvzA	b.1.18.2
				b.71.1.1
				c.1.8.1
2pgfA	371	3.99e+01
1fcyA	236	4.00e+01	2lbd	a.123.1.1

Please cite the following papers:

Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001
Karplus, K. and Karchin, R. and Draper, J. and Casper, J. and Mandel-Gutfreund, Y. and Diekhans, M. and Hughey, R. ``Combining local-structure, fold-recognition, and new-fold methods for protein structure prediction'' Proteins: Structure Function and Genetics53(S6):491-496,15 Oct 2003
Rachel Karchin, Melissa Cline, Yael Mandel-Gutfreund, and Kevin Karplus. ``Hidden Markov models that use predicted local structure for fold recognition: alphabets of backbone geometry.'' Proteins: Structure, Function, and Genetics, 51(4):504--514, June 2003.