Best Alignments for T0632

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2b6eA/T0632-2b6eA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2b6eA/T0632-2b6eA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.1832e-198.87e-77 d.38.1.5
3e1eA/T0632-3e1eA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3e1eA/T0632-3e1eA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.8905e-162.58e-65
3f5oA/T0632-3f5oA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3f5oA/T0632-3f5oA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7916e-155.45e-69
3dkzA/T0632-3dkzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3dkzA/T0632-3dkzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8511e-157.24e-59
2pimA/T0632-2pimA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2pimA/T0632-2pimA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5894e-151.50e-61
3e29A/T0632-3e29A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3e29A/T0632-3e29A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.6155e-156.88e-62
3f1tA/T0632-3f1tA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3f1tA/T0632-3f1tA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.9838e-155.08e-54
3e8pA/T0632-3e8pA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3e8pA/T0632-3e8pA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2655e-146.99e-56
3hduA/T0632-3hduA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3hduA/T0632-3hduA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8528e-131.30e-56
3gekA/T0632-3gekA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3gekA/T0632-3gekA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4661e-135.32e-55

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001