Best Alignments for T0632

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2b6eA/T0632-2b6eA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2b6eA/T0632-2b6eA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2999e-201.91e-78 d.38.1.5
3f5oA/T0632-3f5oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3f5oA/T0632-3f5oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.7432e-181.85e-72
3e1eA/T0632-3e1eA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3e1eA/T0632-3e1eA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.1555e-172.13e-67
3e29A/T0632-3e29A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3e29A/T0632-3e29A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3155e-163.07e-61
3dkzA/T0632-3dkzA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3dkzA/T0632-3dkzA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.6173e-161.40e-55
3e8pA/T0632-3e8pA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3e8pA/T0632-3e8pA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.3292e-167.32e-59
3f1tA/T0632-3f1tA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3f1tA/T0632-3f1tA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.7918e-162.22e-52
2pimA/T0632-2pimA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2pimA/T0632-2pimA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.4549e-155.40e-59
3hduA/T0632-3hduA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3hduA/T0632-3hduA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1508e-131.03e-52
3gekA/T0632-3gekA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3gekA/T0632-3gekA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6918e-135.75e-52

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001