Best Alignments for T0630

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2evrA	4.3045e-04	2evrA/T0630-2evrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.11.3 d.3.1.16
2hbwA	8.1781e-04	2hbwA/T0630-2hbwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3gt2A	9.8514e-04	3gt2A/T0630-3gt2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3h41A	1.3436e-03	3h41A/T0630-3h41A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3m1uA	1.5820e-01	3m1uA/T0630-3m1uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3ebqA	6.4626e-01	3ebqA/T0630-3ebqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2if6A	8.8108e-01	2if6A/T0630-2if6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.3.1.21
1am2	9.6509e+00	1am2/T0630-1am2-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1mi8A	2.0487e+01	1mi8A/T0630-1mi8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.86.1.2
2gc1A	2.8873e+01	2gc1A/T0630-2gc1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.82.1.7
1am2A	2.9670e+01	1am2A/T0630-1am2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.86.1.2
2xdvA	3.0225e+01	2xdvA/T0630-2xdvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3h5mA	3.6399e+01	3h5mA/T0630-3h5mA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3es4A	3.8176e+01	3es4A/T0630-3es4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3lrbA	3.8305e+01	3lrbA/T0630-3lrbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1dq3A	4.1799e+01	1dq3A/T0630-1dq3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.86.1.2 d.50.3.1 d.95.2.2 d.95.2.2
1juhA	4.2765e+01	1juhA/T0630-1juhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1v8qA	4.3309e+01	1v8qA/T0630-1v8qA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.84.4.1
1yozA	4.5316e+01	1yozA/T0630-1yozA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.253.1.1
3c7jA	4.8626e+01	3c7jA/T0630-3c7jA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001