# List of top-scoring protein chains for T0630.t2k-w0.5 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2hbwA	235	0.03414		
3h41A	311	0.1055		
2k1gA	135	0.1313		
2evrA	246	0.4168	b.34.11.3,d.3.1.16	132440,132441
3eaeA	93	8.289		
1n27A	96	16.63	b.34.9.2	91549
2nn6H	308	16.66	b.40.4.5,b.84.4.2,d.51.1.1	148310,148311,148312
3gt2A	142	19.57		
2q6fA	309	20.42		
2nluA	100	22.03	b.34.9.2	148284
1ri0A	110	23.23	b.34.9.2	111806
2wwqY	79	23.87		
2qamW	84	24.61	b.84.4.1	150263
3i1nW	85	24.73		
2b8aA	110	25.08	b.34.9.2	128067
1yozA	116	26.39	a.253.1.1	123796
2ftcO	69	45.59		
2c2iA	151	64.05	d.38.1.4	129670
2bh8A	101	77.06		
1uhdA	96	77.28		
3bboX	198	82.55	i.1.1.1	155090
1uheA	97	87.02		
1iciA	256	89.92	c.31.1.5	62266