# List of top-scoring protein chains for t06-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2evrA	246	0.001280	b.34.11.3,d.3.1.16	132440,132441
2hbwA	235	0.002989		
3h41A	311	0.004796		
3gt2A	142	0.005888		
2if6A	186	0.04120	d.3.1.21	147651
1yozA	116	0.4376	a.253.1.1	123796
3m1uA	434	1.175		
1z6mA	175	3.442	c.47.1.13	124529
3ebqA	170	6.867		
1yf2A	425	10.90	d.287.1.2,d.287.1.2	123042,123043
1tcaA	317	26.91	c.69.1.17	34726
1ydxA	406	29.43	d.287.1.2,d.287.1.2	123004,123005
2k3aA	155	30.65		
2ptmA	198	45.11		
1h2bA	359	46.01	b.35.1.2,c.2.1.1	90543,90544
2a19A	175	47.15		
2im9A	333	52.62	d.3.1.13	137508
3go5A	285	57.66		
1khcA	147	61.46	b.34.9.2	68608
1h8eA	510	61.76	a.69.1.1,b.49.1.1,c.37.1.11	60738,60739,60740
2p1gA	249	66.62		
1ajsA	412	67.64	c.67.1.1	34276
1k0iA	394	71.56	c.3.1.2,d.16.1.2	67942,67943
2hldD	478	78.64		
1ypxA	375	83.41		
3gz5A	240	84.03		
2io8A	619	85.77	c.30.1.7,d.3.1.15,d.142.1.8	137549,137550,137551
1ne8A	117	86.10	b.34.6.2	80424