Best Alignments for T0628

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2e2oA	3.5479e-01	2e2oA/T0628-2e2oA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1huxA	4.7203e-01	1huxA/T0628-1huxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.1.5
3i8bA	1.1207e+00	3i8bA/T0628-3i8bA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ch5A	1.1734e+00	2ch5A/T0628-2ch5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.1.5 c.55.1.5
3gbtA	1.4180e+00	3gbtA/T0628-3gbtA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2zf5O	1.6421e+00	2zf5O/T0628-2zf5O-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2uytA	1.8707e+00	2uytA/T0628-2uytA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1bu6O	2.2344e+00	1bu6O/T0628-1bu6O-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.1.4 c.55.1.4
3ll3A	2.5782e+00	3ll3A/T0628-3ll3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1zc6A	2.9672e+00	1zc6A/T0628-1zc6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.1.5 c.55.1.5
3hz6A	3.0289e+00	3hz6A/T0628-3hz6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2itmA	3.1223e+00	2itmA/T0628-2itmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3flcO	3.1635e+00	3flcO/T0628-3flcO-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3h6eA	3.3720e+00	3h6eA/T0628-3h6eA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2w40A	3.4424e+00	2w40A/T0628-2w40A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3htvA	3.8161e+00	3htvA/T0628-3htvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qm1A	4.0548e+00	2qm1A/T0628-2qm1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3h46O	4.5086e+00	3h46O/T0628-3h46O-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2d4wA	4.7951e+00	2d4wA/T0628-2d4wA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3mcpA	4.8775e+00	3mcpA/T0628-3mcpA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001