# List of top-scoring protein chains for T0628.t2k-w0.5 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://compbio.soe.ucsc.edu/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1qdlB	195	9.497	c.23.16.1	31437
3ezwA	526	11.22		
1glaG	501	13.44	c.55.1.4,c.55.1.4	33507,33508
1gljO	501	15.02	c.55.1.4,c.55.1.4	33525,33526
2itmA	484	18.35		
1bu6O	501	19.37	c.55.1.4,c.55.1.4	33499,33500
2orwA	184	23.69		
1m113	238	25.91		
3eo3A	333	26.22		
1ig8A	486	26.81	c.55.1.3,c.55.1.3	64746,64747
3l9vA	189	28.78		
2d4wA	504	29.80		
3flcO	518	33.03		
3g25A	501	35.96		
3h3nO	506	36.10		
3h46O	506	37.10		
1zc6A	305	38.53	c.55.1.5,c.55.1.5	124888,124889
3b8aX	485	38.99		
1r59O	505	39.39	c.55.1.4,c.55.1.4	111697,111698
3d7eO	505	40.03		
2phcB	225	51.57	b.62.1.4,d.74.5.1	149466,149467
1sfnA	246	57.74	b.82.1.11	105496
2fwiA	183	64.78		
1vbiA	344	76.96		
2dknA	255	78.16		
1zbsA	291	79.01	c.55.1.5,c.55.1.5	124870,124871
3g6eE	172	84.66		
2fw7A	183	86.70		
2jrrA	67	87.47