Best Alignments for T0628

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2e2oA	1.1421e-02	2e2oA/T0628-2e2oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2aa4A	2.3297e-02	2aa4A/T0628-2aa4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.1.10 c.55.1.10
1zbsA	2.7049e-02	1zbsA/T0628-1zbsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.1.5 c.55.1.5
3htvA	3.4213e-02	3htvA/T0628-3htvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1sz2A	5.5030e-02	1sz2A/T0628-1sz2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.1.7
2gupA	7.6534e-02	2gupA/T0628-2gupA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.1.10 c.55.1.10
2ap1A	7.8846e-02	2ap1A/T0628-2ap1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.1.10 c.55.1.10
1zc6A	8.6101e-02	1zc6A/T0628-1zc6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.1.5 c.55.1.5
1huxA	1.2309e-01	1huxA/T0628-1huxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.1.5
2qm1A	1.5390e-01	2qm1A/T0628-2qm1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ch5A	2.7037e-01	2ch5A/T0628-2ch5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.1.5 c.55.1.5
1xc3A	2.8717e-01	1xc3A/T0628-1xc3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.1.10 c.55.1.10
3lm2A	3.0735e-01	3lm2A/T0628-3lm2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1z6rA	3.2296e-01	1z6rA/T0628-1z6rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.63 c.55.1.10 c.55.1.10
2gtdA	3.2700e-01	2gtdA/T0628-2gtdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.1.13 c.55.1.13
1woqA	3.3053e-01	1woqA/T0628-1woqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.1.10 c.55.1.10
3mcpA	5.4307e-01	3mcpA/T0628-3mcpA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2hoeA	6.1844e-01	2hoeA/T0628-2hoeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.63 c.55.1.10 c.55.1.10
3i8bA	8.8428e-01	3i8bA/T0628-3i8bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3epqA	9.7331e-01	3epqA/T0628-3epqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001