Best Alignments for T0628

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2aa4A	1.5185e-02	2aa4A/T0628-2aa4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.1.10 c.55.1.10
2e2oA	2.3535e-02	2e2oA/T0628-2e2oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ap1A	2.9775e-02	2ap1A/T0628-2ap1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.1.10 c.55.1.10
2gtdA	5.7946e-02	2gtdA/T0628-2gtdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.1.13 c.55.1.13
2gupA	7.7168e-02	2gupA/T0628-2gupA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.1.10 c.55.1.10
1xc3A	1.9642e-01	1xc3A/T0628-1xc3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.1.10 c.55.1.10
2qm1A	2.6986e-01	2qm1A/T0628-2qm1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1sz2A	3.3670e-01	1sz2A/T0628-1sz2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.1.7
2h3gX	3.6285e-01	2h3gX/T0628-2h3gX-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1z6rA	4.4289e-01	1z6rA/T0628-1z6rA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.63 c.55.1.10 c.55.1.10
1zc6A	5.6840e-01	1zc6A/T0628-1zc6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.1.5 c.55.1.5
1woqA	6.6166e-01	1woqA/T0628-1woqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.1.10 c.55.1.10
1zbsA	6.7467e-01	1zbsA/T0628-1zbsA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.1.5 c.55.1.5
2hoeA	7.1705e-01	2hoeA/T0628-2hoeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.63 c.55.1.10 c.55.1.10
2ch5A	7.4188e-01	2ch5A/T0628-2ch5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.1.5 c.55.1.5
3htvA	7.6329e-01	3htvA/T0628-3htvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bexA	9.6330e-01	3bexA/T0628-3bexA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.1.13 c.55.1.13
2ewsA	1.1731e+00	2ewsA/T0628-2ewsA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.1.14
2q2rA	2.0739e+00	2q2rA/T0628-2q2rA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3lm2A	2.1363e+00	3lm2A/T0628-3lm2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001