T0628.t2k.100-30-stride-ebghtl

Sequence_ID	Length	Evalue	FSSP-rep	SCOP_domain
1zbsA	291	2.38e-08		c.55.1.5
				c.55.1.5
1huxA	270	2.48e-06	1huxA	c.55.1.5
2h3gX	268	1.46e-05
1zxoA	291	6.36e-05		c.55.1.5
				c.55.1.5
2e2oA	299	9.10e-05
2gtdA	251	1.09e-04		c.55.1.13
				c.55.1.13
3bexA	249	1.48e-04		c.55.1.13
				c.55.1.13
2gupA	292	8.54e-04		c.55.1.10
				c.55.1.10
2qm1A	326	3.26e-03
3h1qA	272	4.61e-03
2ap1A	327	4.61e-03		c.55.1.10
				c.55.1.10
3h6eA	482	6.02e-03
2ch5A	347	9.82e-03		c.55.1.5
				c.55.1.5
3mdqA	315	1.01e-02
2hoeA	380	1.24e-02		a.4.5.63
				c.55.1.10
				c.55.1.10
3htvA	310	1.85e-02
2aa4A	289	2.05e-02		c.55.1.10
				c.55.1.10
3mcpA	366	2.11e-02
1glcG	501	4.65e-02	1glcG	c.55.1.4
				c.55.1.4
1glaG	501	4.69e-02	1glcG	c.55.1.4
				c.55.1.4
1zc6A	305	5.41e-02		c.55.1.5
				c.55.1.5
3cqyA	370	6.45e-02
2itmA	484	7.49e-02
1ig8A	486	7.78e-02	2yhx	c.55.1.3
				c.55.1.3
2o4cA	380	8.15e-02
3ifrA	508	9.57e-02
3flcO	518	9.95e-02
3h46O	506	1.04e-01
3h3nO	506	1.13e-01
1u6zA	513	1.13e-01		a.211.1.5
				c.55.1.8
				c.55.1.8
1bu6O	501	1.23e-01	1glcG	c.55.1.4
				c.55.1.4
1xc3A	302	1.35e-01		c.55.1.10
				c.55.1.10
3ezwA	526	1.35e-01
3gjuA	460	1.38e-01
3d7eO	505	1.50e-01
3lm2A	226	1.52e-01
2zf5O	497	1.65e-01
1hkbA	917	1.71e-01	1qhaA	c.55.1.3
				c.55.1.3
				c.55.1.3
				c.55.1.3
3epqA	302	1.79e-01
3l0qA	554	1.95e-01
3fcrA	458	2.35e-01
2f9wA	271	2.74e-01		c.55.1.13
				c.55.1.13
3gg4A	554	2.75e-01
1czaN	917	3.21e-01	1qhaA	c.55.1.3
				c.55.1.3
				c.55.1.3
				c.55.1.3
1dgkN	917	3.27e-01	1qhaA	c.55.1.3
				c.55.1.3
				c.55.1.3
				c.55.1.3
3i8bA	515	3.98e-01
3g1uA	437	4.03e-01
2d4wA	504	4.22e-01
3gbtA	504	4.33e-01
3hz6A	511	5.60e-01
1nbwA	607	5.81e-01		c.8.6.1
				c.55.1.6
				c.55.1.6
3ll3A	504	5.91e-01
2uytA	489	5.95e-01
1v4sA	455	6.11e-01		c.55.1.3
				c.55.1.3
1mwmA	320	6.19e-01		c.55.1.1
				c.55.1.1
1woqA	267	6.54e-01		c.55.1.10
				c.55.1.10
2bkwA	385	6.95e-01		c.67.1.3
1qhaA	917	8.19e-01	1qhaA	c.55.1.3
				c.55.1.3
				c.55.1.3
				c.55.1.3
2hpaA	342	9.44e-01	1cviA	c.60.1.2
3hicA	320	9.84e-01
3jvpA	572	1.07e+00
2ivnA	330	1.23e+00
3gohA	315	1.31e+00
2zgyA	320	1.35e+00		c.55.1.1

Sequence_ID	Length	Evalue	FSSP-rep	SCOP_domain
				c.55.1.1
1nd6A	354	1.38e+00		c.60.1.2
2dpoA	319	1.44e+00
3adoA	319	1.44e+00
1ez4A	318	1.56e+00		c.2.1.5
				d.162.1.1
1qh8B	519	1.67e+00	1qguB	c.92.2.3
1m1nB	522	1.72e+00		c.92.2.3
3hmuA	472	1.74e+00
2oaaA	249	1.92e+00
2z0rA	103	1.97e+00
1xwfA	431	2.05e+00		c.2.1.4
				c.23.12.3
2cdcA	366	2.14e+00
1gaxA	862	2.16e+00	1gaxA	a.2.7.3
				a.27.1.1
				b.51.1.1
				c.26.1.1
2d6yA	202	2.16e+00		a.4.1.9
				a.121.1.1
2i6xA	211	2.17e+00
1qguB	519	2.23e+00	1qguB	c.92.2.3
3ip1A	404	2.32e+00
3k4jA	623	2.50e+00
3blyA	623	2.54e+00
1t6cA	315	2.81e+00		c.55.1.8
				c.55.1.8
1mioA	534	2.82e+00	1qguA	c.92.2.3
1xcrA	316	2.84e+00		d.290.1.2
1b3rA	431	3.05e+00	1b3rA	c.2.1.4
				c.23.12.3
3bg6A	623	3.13e+00
2qxfA	482	3.25e+00		c.55.3.5
1fcdA	401	3.39e+00	1fcdA	c.3.1.5
				c.3.1.5
				d.87.1.1
1s2xA	206	3.40e+00		a.47.3.1
1tzlA	622	3.55e+00		c.3.1.2
				d.16.1.1
3k4kA	623	3.68e+00
2chuA	296	3.88e+00		c.92.2.4
1tt0A	623	3.89e+00
1cviA	342	3.99e+00	1cviA	c.60.1.2
2orwA	184	4.09e+00
2iyaA	424	4.10e+00
1vhxA	150	4.14e+00		c.55.3.8
3ef6A	410	4.25e+00
1nytA	271	4.37e+00		c.2.1.7
				c.58.1.5
2vkeA	208	4.38e+00		a.4.1.9
				a.121.1.1
3k4cA	623	4.51e+00
3k4nA	623	4.53e+00
3fdyA	623	4.58e+00
3k4mA	623	4.74e+00
2w40A	503	4.83e+00
7a3hA	303	4.87e+00	7a3hA	c.1.8.3
1rpa	342	4.94e+00	1cviA
2q2rA	373	5.04e+00
2iuyA	342	5.05e+00
1ovnA	248	5.22e+00		a.71.1.1
				c.47.1.7
2tct	207	5.36e+00	2tct
1h2aL	567	5.41e+00	1h2rL	e.18.1.1
1d4fA	431	5.63e+00	1b3rA	c.2.1.4
				c.23.12.3
3fryA	73	5.72e+00
1npyA	271	5.90e+00		c.2.1.7
				c.58.1.5
1q52A	314	6.15e+00		c.14.1.3
3js6A	355	6.19e+00
1h2rL	534	6.35e+00	1h2rL	e.18.1.1
3f0hA	376	6.48e+00
3ce6A	494	6.57e+00
3g68A	352	6.65e+00
2h7dA	101	6.66e+00
1yuwA	554	6.81e+00		b.130.1.1
				c.55.1.1
				c.55.1.1
3f9mA	470	6.87e+00
1sz2A	332	6.94e+00		c.55.1.7
1zp4A	304	7.10e+00
1bupA	386	7.28e+00	1ba1	c.55.1.1
				c.55.1.1
1ba1	386	7.29e+00	1ba1
3dhyA	495	7.44e+00
1v8bA	479	7.52e+00		c.2.1.4
				c.23.12.3
2iwoA	120	7.55e+00
3d1lA	266	7.56e+00
1h5vA	304	7.57e+00		c.1.8.3
1bs0A	384	7.84e+00	1bs0A	c.67.1.4
2wzhA	737	7.85e+00
1dkgD	383	7.95e+00	1ba1	c.55.1.1
				c.55.1.1
3gl1A	387	8.04e+00
3i33A	404	8.18e+00
3fzhA	381	8.19e+00
2cwoA	197	8.28e+00
2vo1A	295	8.30e+00		c.37.1.10

Sequence_ID	Length	Evalue	FSSP-rep	SCOP_domain
1li4A	432	8.33e+00		c.2.1.4
				c.23.12.3
2vvnA	737	8.37e+00		a.246.1.1
				c.1.8.10
				d.92.2.3
2gelA	231	8.37e+00
3kzhA	328	8.38e+00
3iqwA	334	8.91e+00
3dhnA	227	9.08e+00
2g7gA	213	9.15e+00		a.4.1.9
				a.121.1.1
2qdxA	257	9.29e+00
2ewsA	287	9.86e+00		c.55.1.14
3hfqA	347	9.86e+00
2choA	716	9.94e+00		a.246.1.1
				c.1.8.10
				d.92.2.3
3mydA	365	9.95e+00
1kay	381	9.99e+00	1ba1
1g6oA	330	1.02e+01	1g6oA	c.37.1.11
3fstA	304	1.03e+01
2f5vA	595	1.04e+01		c.3.1.2
				d.16.1.1
1a7aA	432	1.06e+01	1b3rA	c.2.1.4
				c.23.12.3
2nqlA	388	1.07e+01
2e1bA	216	1.11e+01		b.43.3.6
				d.67.1.2
1b5tA	275	1.11e+01	1b5tA	c.1.23.1
1j7yB	146	1.13e+01		a.1.1.2
3fsuA	304	1.13e+01
3m3mA	210	1.14e+01
1y8aA	332	1.14e+01		c.108.1.24
2bkkA	264	1.16e+01
3e0xA	245	1.16e+01
1ekfA	365	1.16e+01	1ekfA	e.17.1.1
2w72B	146	1.16e+01
3cj1A	456	1.17e+01
1dxtB	147	1.18e+01	1abwA	a.1.1.2
3dnsA	135	1.18e+01
1oi0A	124	1.22e+01		c.97.3.1
1a01B	146	1.23e+01	1abwA	a.1.1.2
1j4aA	333	1.25e+01		c.2.1.4
				c.23.12.1
2pt7A	330	1.25e+01		c.37.1.11
1okjA	251	1.25e+01		c.55.1.9
				c.55.1.9
2o7oA	207	1.28e+01		a.4.1.9
				a.121.1.1
2a1hA	365	1.29e+01		e.17.1.1
3aapA	353	1.30e+01
1a6i	217	1.30e+01	2tct
3ie7A	320	1.31e+01
2nxwA	565	1.32e+01
2pfrA	294	1.35e+01
2d5xB	146	1.36e+01		a.1.1.2
1esc	306	1.39e+01	1esc
1escA	306	1.39e+01		c.23.10.1
2g35A	100	1.40e+01		b.55.1.5
1wuiL	534	1.41e+01		e.18.1.1
1ubkL	534	1.41e+01		e.18.1.1
1a00B	146	1.42e+01	1abwA	a.1.1.2
1a8pA	258	1.42e+01		b.43.4.2
				c.25.1.1
3khyA	384	1.43e+01
3glqA	494	1.45e+01
3hhfA	213	1.46e+01
1nijA	318	1.47e+01		c.37.1.10
				d.237.1.1
1lehA	364	1.47e+01	1bw9A	c.2.1.7
				c.58.1.1
3g91A	265	1.50e+01
3g00A	265	1.51e+01
1fxxA	482	1.51e+01	1fxxA	c.55.3.5
3cr3A	192	1.51e+01		a.208.1.1
1wwmA	190	1.52e+01		a.132.1.3
1irdB	146	1.57e+01		a.1.1.2
2gzsA	278	1.59e+01		c.69.1.38
1hdmB	193	1.59e+01	1hdmB	b.1.1.2
				d.19.1.1
1ohlA	342	1.61e+01		c.1.10.3
2nx4A	194	1.62e+01
2pidA	356	1.63e+01
2zsjA	352	1.64e+01
2qu8A	228	1.65e+01
2ijaA	295	1.68e+01
1yewB	247	1.70e+01
1t5hX	504	1.70e+01		e.23.1.1
2a6aA	218	1.75e+01		c.55.1.9
				c.55.1.9
1n55A	251	1.75e+01		c.1.1.1
2vl7A	540	1.76e+01
3n58A	464	1.76e+01
1v1aA	309	1.77e+01		c.72.1.1
2wtbA	725	1.77e+01
2dbhA	102	1.77e+01
3cerA	343	1.79e+01
2c0gA	248	1.83e+01		a.71.1.1
				c.47.1.7
1itzA	675	1.85e+01		c.36.1.6

Sequence_ID	Length	Evalue	FSSP-rep	SCOP_domain
				c.36.1.10
				c.48.1.1
3fziA	265	1.85e+01
2oocA	113	1.85e+01		a.24.10.6
3g5jA	134	1.86e+01
2o38A	120	1.88e+01		a.35.1.13
3aekA	437	1.89e+01
3i5tA	476	1.94e+01
3fvcA	663	2.00e+01
3cx5A	431	2.03e+01		d.185.1.1
				d.185.1.1
1ylvA	342	2.03e+01	1b4kA	c.1.10.3
2ix0A	663	2.03e+01		b.40.4.5
				b.40.4.5
				b.40.4.5
				b.40.4.16
1sazA	381	2.03e+01		c.55.1.2
				c.55.1.2
3hhgA	306	2.04e+01
2dvmA	439	2.04e+01
1um8A	376	2.05e+01		c.37.1.20
1wf3A	301	2.05e+01		c.37.1.8
				d.52.3.1
1urvA	190	2.09e+01		a.1.1.2
3ipoA	416	2.09e+01
3d64A	494	2.11e+01
1jr8A	117	2.14e+01		a.24.15.1
2af6A	258	2.15e+01
3gqpB	145	2.21e+01
1u3aA	189	2.21e+01		c.47.1.13
1khdA	345	2.23e+01		a.46.2.1
				c.27.1.1
1xdnA	277	2.24e+01		d.142.2.4
1p77A	272	2.27e+01		c.2.1.7
				c.58.1.5
1lluA	342	2.27e+01		b.35.1.2
				c.2.1.1
1jkmA	358	2.28e+01	1jkmA	c.69.1.2
3i0yA	140	2.28e+01
3ls0A	133	2.28e+01
3hi0A	508	2.30e+01
3cw9A	504	2.31e+01		e.23.1.1
1poiB	260	2.31e+01	1poiB	c.124.1.3
3ihlA	282	2.34e+01
1kblA	873	2.36e+01		c.1.12.2
				c.8.1.1
				d.142.1.5
2uubK	129	2.36e+01		c.55.4.1
1fdr	248	2.37e+01	1fdr
1fdrA	248	2.37e+01		b.43.4.2
				c.25.1.1
3h5dA	311	2.37e+01
1xx6A	191	2.39e+01		c.37.1.24
				g.39.1.14
3gwcA	258	2.39e+01
1rp4A	389	2.40e+01		a.227.1.1
1rjwA	339	2.44e+01		b.35.1.2
				c.2.1.1
3iplA	501	2.44e+01
1sg6A	393	2.44e+01		e.22.1.1
1neiA	60	2.45e+01		d.253.1.1
1f9vA	347	2.47e+01	1bg2	c.37.1.9
1iv8A	720	2.49e+01		b.71.1.1
				c.1.8.1
2vugA	389	2.52e+01
1dik	874	2.54e+01	1dik
2i5qA	415	2.61e+01
1ldnA	316	2.62e+01	1hyhA	c.2.1.5
				d.162.1.1
1yqdA	366	2.62e+01
3fpkA	251	2.67e+01
1aw9A	216	2.69e+01		a.45.1.1
				c.47.1.5
2gnoA	305	2.70e+01		a.80.1.1
				c.37.1.20
3a4rA	79	2.70e+01
3a07A	118	2.76e+01
2pn8A	211	2.81e+01
2frvB	536	2.81e+01	1h2rL	e.18.1.1
2vkvA	208	2.86e+01		a.4.1.9
				a.121.1.1
2dc3A	193	2.87e+01
3jz4A	481	2.88e+01
2xdqA	460	2.93e+01
2jrrA	67	2.96e+01
1vjqA	79	2.96e+01		k.43.1.1
3khdA	520	2.96e+01
3l9vA	189	2.97e+01
2o8nA	265	2.99e+01
2yv8A	164	2.99e+01
2p3zA	415	3.01e+01
3hefA	143	3.02e+01
3gazA	343	3.02e+01
3eulA	152	3.04e+01
1ezjA	115	3.09e+01	1ezjA	h.1.14.1
2waxA	193	3.09e+01
2p63A	56	3.11e+01
3hf4B	146	3.12e+01
2v43A	303	3.13e+01
3ic5A	118	3.16e+01

Sequence_ID	Length	Evalue	FSSP-rep	SCOP_domain
2rgyA	290	3.17e+01
1f3yA	165	3.19e+01		d.113.1.1
1ry6A	360	3.25e+01		c.37.1.9
3ctaA	230	3.33e+01		a.4.5.28
				b.43.5.2
1e3jA	352	3.36e+01	1e3jA	b.35.1.2
				c.2.1.1
1zd9A	188	3.37e+01		c.37.1.8
2i6gA	199	3.37e+01		c.66.1.44
2cy8A	453	3.39e+01
1kb9A	431	3.44e+01		d.185.1.1
				d.185.1.1
3d4xB	145	3.46e+01
3fpfA	298	3.46e+01
3hyuB	146	3.52e+01
3dhtB	146	3.53e+01
1z2mA	155	3.57e+01		d.15.1.1
				d.15.1.1
3lotA	314	3.58e+01
1a7vA	125	3.59e+01	1cpq	a.24.3.2
1k75A	434	3.66e+01		c.82.1.2
2xanA	451	3.66e+01
1kaeA	434	3.66e+01		c.82.1.2
1k7wA	468	3.66e+01		a.127.1.1
3kkdA	237	3.67e+01
1qq2A	199	3.67e+01	1qq2A	c.47.1.10
2gshA	414	3.70e+01
2f4wA	187	3.71e+01		d.20.1.1
1uvqB	198	3.71e+01		b.1.1.2
				d.19.1.1
2c07A	285	3.74e+01		c.2.1.2
1qyiA	384	3.75e+01		c.108.1.13
3mzvA	341	3.76e+01
1ac1A	189	3.76e+01	1fvkA	c.47.1.13
2j6lA	500	3.76e+01
1m5yA	408	3.78e+01		a.223.1.2
				d.26.1.1
				d.26.1.1
3crnA	132	3.79e+01
2jc5A	259	3.80e+01
1cmyB	146	3.81e+01	1abwA	a.1.1.2
2dldA	337	3.82e+01	1dxy	c.2.1.4
				c.23.12.1
3iu1A	383	3.83e+01
2dkaA	544	3.84e+01
1e3dB	542	3.91e+01	1h2rL	e.18.1.1
2vxnA	251	3.91e+01
1i19A	561	3.97e+01	1i19A	d.58.32.3
				d.145.1.1
3boxA	415	3.98e+01
3e58A	214	4.00e+01

Please cite the following papers:

Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001
Karplus, K. and Karchin, R. and Draper, J. and Casper, J. and Mandel-Gutfreund, Y. and Diekhans, M. and Hughey, R. ``Combining local-structure, fold-recognition, and new-fold methods for protein structure prediction'' Proteins: Structure Function and Genetics53(S6):491-496,15 Oct 2003
Rachel Karchin, Melissa Cline, Yael Mandel-Gutfreund, and Kevin Karplus. ``Hidden Markov models that use predicted local structure for fold recognition: alphabets of backbone geometry.'' Proteins: Structure, Function, and Genetics, 51(4):504--514, June 2003.