Best Alignments for T0627

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1rcwA	1.9286e-23	1rcwA/T0627-1rcwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.132.1.4
2qzcA	1.4317e-18	2qzcA/T0627-2qzcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1uddA	4.3587e-18	1uddA/T0627-1uddA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.132.1.3
3ibxA	5.9950e-18	3ibxA/T0627-3ibxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1tyhA	7.8933e-18	1tyhA/T0627-1tyhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.132.1.3
1yakA	9.0428e-18	1yakA/T0627-1yakA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.132.1.3
2qcxA	1.0203e-17	2qcxA/T0627-2qcxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2rd3A	4.5555e-17	2rd3A/T0627-2rd3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3mvuA	1.3571e-16	3mvuA/T0627-3mvuA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1rtwA	4.5407e-16	1rtwA/T0627-1rtwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.132.1.3
3ddeA	6.1877e-16	3ddeA/T0627-3ddeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1z72A	1.4638e-15	1z72A/T0627-1z72A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.132.1.3
2f2gA	3.2916e-15	2f2gA/T0627-2f2gA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.132.1.3
2q4xA	3.3560e-15	2q4xA/T0627-2q4xA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.132.1.3
1otvA	1.0448e-12	1otvA/T0627-1otvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.132.1.4
2a2mA	4.5332e-12	2a2mA/T0627-2a2mA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.132.1.3
3hlxA	7.9418e-12	3hlxA/T0627-3hlxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3hnhA	3.1830e-10	3hnhA/T0627-3hnhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3hmlA	3.4160e-10	3hmlA/T0627-3hmlA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bjdA	8.1381e-09	3bjdA/T0627-3bjdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001