Best Alignments for T0627

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1yakA	1.1107e-27	1yakA/T0627-1yakA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.132.1.3
2qcxA	1.5006e-26	2qcxA/T0627-2qcxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2rd3A	3.0657e-26	2rd3A/T0627-2rd3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3ibxA	3.1496e-26	3ibxA/T0627-3ibxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1tyhA	4.7283e-26	1tyhA/T0627-1tyhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.132.1.3
3mvuA	5.0629e-25	3mvuA/T0627-3mvuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1rcwA	1.0309e-24	1rcwA/T0627-1rcwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.132.1.4
3hlxA	1.0382e-24	3hlxA/T0627-3hlxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2a2mA	1.4345e-24	2a2mA/T0627-2a2mA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.132.1.3
1uddA	2.1570e-24	1uddA/T0627-1uddA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.132.1.3
3hmlA	7.3870e-24	3hmlA/T0627-3hmlA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qzcA	7.3940e-24	2qzcA/T0627-2qzcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3ddeA	9.8886e-24	3ddeA/T0627-3ddeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1otvA	1.2225e-23	1otvA/T0627-1otvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.132.1.4
1z72A	1.4020e-23	1z72A/T0627-1z72A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.132.1.3
1rtwA	8.7415e-23	1rtwA/T0627-1rtwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.132.1.3
2f2gA	1.3022e-22	2f2gA/T0627-2f2gA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.132.1.3
2q4xA	4.3928e-20	2q4xA/T0627-2q4xA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.132.1.3
3bjdA	6.7518e-19	3bjdA/T0627-3bjdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3hnhA	7.7337e-19	3hnhA/T0627-3hnhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001